Pay0008590 (gene) Melon (Payzawat) v1

Overview


Name	Pay0008590
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	succinate dehydrogenase subunit 6, mitochondrial
Location	chr02: 7758787 .. 7767700 (-)
RNA-Seq Expression	Pay0008590
Synteny	Pay0008590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGAGCTTTGAAGAGCGAGATTGGAGAGCTAGAAGAGAGAACAGTTTTCAGGATTCTGATTTCAATCGGATTTAGCTTCTAAAATCTCAATCTTAATCTGTTTTTTGAGGGAGCAATCATGGAAGATTCGTCCTCTCAATCCTTCTTCAGGAAGCACTGGGAAGGCTACAAGGAGTTTTGGTCCGAGAGATTCTCAATTCTCGACAACTATAGCCCCTACGTCCAGCGCCCGACCCCTCTTCCTTCATGGTCTTCCTCCGATGTCGAGGAATTTATTGCTTCTGACCCCGTTCATGGCCCCGTTGTAATTCATCCTTCACTTCTTTCCTCTTTTACTTCTTTTACTTCTTCTGTTGCCTGCTTCTGAGTTGATGTCACTCGGTGTTTCATATCATCTCGTTTGTTTTTTTGATCCATGCATGATGGGGTTTGAGGGTTTTGCTGTTTCTTGAATCCCACAATTAAATTTTCCTTTGAGGGTGAACATATCCAACTTGAGTTTATTCTTAGATTCGTATATCTGAAATTAAATGTGTTCATTAATATTTTTGTCTGGAGATTAGGTAATGGAGTTTTTTTTTTCCTTTGAGCTTGGGATAATCTGAAATTTCCTTGCCCAATGAGTGTTGGTACCCGATGGCTTGAGTTATAATATTGTATGACTCTTAGTAGGGAACTGGACTAAATATTTCCTTTTAGAATGCTTTTTATGGTCTGTTGCTGCCAATTTTACAAGTACATTTTTTAAAATGAAAAGTTGGATAGAAGGGACGATTTCGTTGATAAACGAAATAAAGGAGTAAAAACTCCAAGCACCTTATTGGTGAGTTACAAGAAAGAAGATCAATTGGAGATGAAAAAAGATCAGCTATGAAGTGCAAAACAGTGCTGATTTTTACGCCAAAAGAAAACCCTATTCTCAAAAGAAGAGAATACACCATTTCGTTCTCCCCAAAGATGCCACAAGAACATACGGATTTTGGCAACCAAAGAGTCTTCCTCAAACCACAAAATGGGTTCCCGCCCAAACAAAGCAAGGAGATCGTGCTTCCAAAAGTATGTACCAAAAACAAGATGACTAAGAGATTTAGCATTTGAATTGCACATAACACACCAAGAAGGTGTCAAACACATAATAAGGAGATCTTGCTTTCATTTTAGAAGTACCTAATAGTAGTCTTTTGAAACCGTTTCTATCATAACAAGTGAAATAATATTTTCCTTTTGAACTTTTATTTATAATCATGAGTGTCCAGGCCAGTTTACGCAAATCCCGACTAATTTCATGGGACAACTCGCTTGACCCTACAACATTTTGGGTCTCAAAAAAACTTATAGGAAATTAATTCTTAAGTAGGTCACCGCCATGAGTTTTATGGTAAATAGTTAGATCATGGATTCATTATATGATCTTCCTTGCCTTCTTAAGTTCACTACTTGGCCGGGGTGCTTGCTCTATTCTTTTTCTGTTTAGTTTATTCCTACACATTCTTCTGTATGAAATTTTGATAACTACTTAAGTAGCATATCACCTTAAAGACAGGCGGGTTAAGCATGGTTGTCATTTTGTTTCACATTTTTCCAACGTAGCGGGAAGGCAAAGGCAGATTCCTCAAATTTCTGTTAGTAAGAGTTCATGTACATGCTTCTAGATTCCTCATTCATTGGCTGCTTATTGTTCCTTTTCAGTTAAAGACTGCCAGAGAGGCTGTAAACTTTGGTCTCACAGGAAGTGTTATTGGAGCTGTATCGACTGCAGGTGTTGCATGGAAATACTCAAAAAGTTTACATGGTATTCAACTCCCTTGTCTTTCCATTTGACTGCCAACTTCATATCTGTAAAAGGCATACCAGTAGCGTTCAAAATATCCTCTTACTTTACTACTGCTAACATTAACAATTGTTTCTCTTTTTGAATTTTTAAGTATAACGTGGTTCAACCATATCTGCAATCATATCTCTTCAAGTTACATTCCTTTTCTTGTTTCCATCTCTATGCAAGTTCCAATGTCCTTTTCAAACCAATACAGCACATTTTTATTTTCATTCGCTAAAAGTAAAACTTGGGTGGTACTATACTGTACTTACCACTCAAATAGGTCACAAGTTTGGTTGACATGAACGTATACAGTATACTTGCTTAAAGCAATTTGTGATTTATTTAATAGGGTGATTGATAGAACACCAAGTAGTGTGTTCTATTTGTTCATTAATCAACCAAACTTTTACAGAATAACAGTAATCAAACAAGTCTTGAAAACACAGAACAACTTAAGAACAAGTACAGAATTCAACCAATTCAAAATGAAACATCAAACAGAAAGTTACTTTCACGTAAATGGAAACAACTTCTAAACACTATGGTAACTGACACTCTCTGTAATTCCTAGACTCCAGGAAACTACAGCCCTCTACTTCCAGAAACTGATTAACCACCCCCATCTTCCCTTCCTGCTTTCCCTTTTAACTCCATCCCATGTAACTAACCGTGGTTCCCACCAAGGTGGTTTCCACTTCCTCCTCCATTTCCCTTTCTCTTTTGCACGTGTAACTTCTCCCTTTTTCTTCCTACTATATTGTAAAATAATTGGTGGTCTATCAGTGATATATTGATTAGTCTCAAGTTGGAAACGTGCAATGTCCTGTTGTAGAATACTGACATCCTTAAGGCTCCAATTCTTGTTTTAAGAGCTGGCTTTGTTTGTCAAGATCTTAAGAATCTTTTATGTTTAAATCTGCTGCGTCCAAGCAAACAAACTAGCTTGGTTCAATGTTTATTATGAGCATTGTGTTCTATATCATACCAAAGCCACATGATTCATCATACCAAAACCAGAAGATTCCGATGATGGTTCCAATGTTAGTGTCAGCAGTGAAGAGTTAGAGCAACATAGCATTCATACAGTAGAAGAAGAACAATACAGTGATTTATTGGGGGAAGCGTATAAATCAATCCTCCTTCAGCACGAGCAACTTCCACCCTCCCGAATCCCTTCTAAGTTCAGTTCTCTCGTCAATAAATGTGGTCTACAACTGCAGATAATCTCCTCCCCTTGACCATGAAGATTTTAACCTGGAATACAATGATAAATCTGAAGCAACAGCACTGAAGCACTTCTTACAATCTATTCATCTGGACATAGTTCTAATCCAAGAAACAAAGAAGTCGGACATTGACCACCAATTCATCAAATCAATTTGGAGTTCAAATGGAATCGGCTGGATGTTTGTAGAGGCTTTTGGAAGATTGGGTGGCATGCTTACAATGTGGGACGAAAGCAAGGTTGCTCAATTGAATTCCTCAAGGCGGGTATTCTCTTTCAGTAAAATTCAAGACTCAATGCAACAATGTCTGTTGGATGACAAATATATATAGAGCAACTAATTACAGAGAAAGGAAATTCTTTTGGCCAGAACTGATTTCTCTATTACATTACTGTTTGGAACCATGGTGCTTAGGAGAAGACTTCAATATAACCAGATGGGCCTATGAAAGATCACCATTGGGTAGGACAACAAAAGGAATGAAAAAGTTTGACAATTTCTTCAAGGAAGCTGCCTTACAGGACATACCCTTATCAAATGGACTGTTCACTTGGTCTAGAGAAGAAATTTCCAATTCACATTTTCTAATTGATCGTTTCCTTGTTACCAAGGACTGGGACGACTTATTTCCAATTCCACTGTCAATTGAAAAGCAAAAATTCTCTCAGACCGTTTTCCACTGCTAATGGAAACATGTTCGATAAGCTGGGCCCTAGTCCTTTTCGTTTCTGTAACAGCTGGTTGTTTCCAATTGCTCAAGAGAAATTTGTAAAGCGCTAGAGGAAGATCAATCAAATGGTTGCGCAGGATTTGTCTTAAATCTCAAACTTCGAAAAGTCAAGGGAAAAGTAAAAGCATGGCCCGCCGACTATGAAAAAGAAAGACAAGGGAAAGAGAATGATCTTATTCCGGAGTTGGAATTCTTCGATTCAAAGGCTGAACAGAGCACACTCTCTTCAACGGAGTAAGATATTTGTTTTGCAGTCAAATGAGGTTTAATAATATTGCATTACTTGGAAGAAAGAAATCTGATTCAGAAAAGCAAATTGAATTGGTTGAGGTTGGGCGATGAGAATACATCCTTTTTCTATCGTTTTCTTGCAGCAAAAAAGACGAAATTGTTTACTGAAATACTCTCTTTAGACGAAGTACCAATAACCTCATTTAGAGCCATTGAAGGTGAAATTCTGCATTATTTTGAACCCCTCTATAAAAAAGCTCACAGGCCCTAGAATCTTCCTCTCCAATCTATTTTGGAAACAGGTTGGTGCATCTCAAAATTCCTTCTCAATGGCATCATTCAATGCGGAAGAAATCCTACTAGCCATAAAAGCTCTTGGGAAAAATAAGGCACCAGATCCCGACAGTTTCACAGTGGAACTCTTCCTAGAATATTAGAATTTGTTCAAAGAGGTCTTCCAAAAATGTTCCACAAATTTGTGAAAATGGAAGGCTGAATGCTTGCATCAAGGAAAACTTTGTCTTATTCAAAAAAAAAAAAAAAAAAAAGAAGAATCCCTCTTTGTCAAAGATTTTTGGCCCATTAGTCTCACCACATCTTCCTACAAAAGCATTACCAAAATCTTGGCAGAAAGAATGGAGAAAGTCATGCCCTCAATAATAGCCAATATTCAAAATAGCCAATATTCAAAGTGCTTTCATAAGAGATGCCAAATTTTGGATCCAATCCTTATAGCAAACGAGGCAGTGGAGGACTACCGAGTAAGGAAGAAAAAAGGTTGGATTCTCAAAATTAACCTCGAAAAGGCATTTGACCGAGTAAAATCTATTTTTCTAGACAGCATCGTCAAGCATATGGGTTTTCATCCAAAATGGATGGAGTGGATAAATGTATCTATCCAACACCTAAAATTCTTGATCTTGATTAATGGTCGACCATGAGGCTACATCTTAGCATCAAAAGATATACGTCAATGGGATCCACTATCCCCCCTTCATATTTCTTCTAATCAGTGAGGTTCTCAGCCTATTAATCTCACAGGCACATCAGAATGGTTTATTCGAAGGCTTTATGGTTGGGACAGACAAAATCCATCTCTCCATCTGATAAGCGCATAAAATGTGCTTAATTTTACTTCTTATTTAGGGCTGATTTTATTGGATTTAATGTGTTTTATAGTGTTTCTTAGCAAATTATGGCTAATTTATCATTTCGGATAAAAATAGACGAAAGCGGGCAAACCCAAGTCAATTTAGAACAAAAATGAAGGATATATGCGAGATTACAAAATTTTCCCTAGAAGAAGGGCTGCGTCGCATCACTACCTATAGAGTAGCAACGAGGCCCACAAGGAGATGATGCGTCGAGTGGTCCCATGCGTGTGATGAGTAGGCATCGAAAGTAGACAGCGTCACAACGTTGTGCAACAGACACCACATAGTGCACTCGGCAAACGACTAGTGCGGTTGGTGAAGATGCCCTACAGCGTCATAATGTGCCTATAGCGTTGCAAGGATATCTCCCTATCCAACATGTATAAATAGGGCTTCAATTTGTCATTTTAAGCTTCCCATTTGATTCCAAAACATCCCAATCATGGGAATCTCTCCTCCATACTTTCTTTCTTTTGTGCTACTTATAGTGTTGTGAGTTAAGGGATTTATTTTGGAGGCCATTTGAGTTCCGGAGGCATAAATCAAGGCATTCTAGGAGGTTTTCAATGAGAATGAAGTATTCAAGATTTGTTCTTTTTTGGTTCCTTCTATTCTTTTCACTATTATGCTTGATATTTCTTATGAGAATATGTCTTTCAAAGCAGCTAATTTTTCTAGTTTTAGGGTGTTTGATTTATTTTCATATGGATTTAAGATTGTAATTTGTGCTTTCATGGATATTGTTGAATTTTATGTTTTTTAATGTTATTATGCTTATCTCATATTAAATTGTCATCAATATATTTTAGGTTGAATGTTGATATCAAGAGATAATATGTTTGCCTGGACTTGTAACGTTAAATCGTTATTGAACCTTTCATGAAAATAGCTAGGTCGATAATGAAAGTTGTTGACGACAATACTGCCTTGCTCTTAATTTGGTATCAAAAAATTAGTTATCAATCAAGTTGCATGAGAATGGGTTGTTTCTTAGAGAAAATAATCTTGATTTAAGTTTCTAGACTTATGCATAATGTTCATAAAAGATTCCATGGTTGCATAAATTACAACTTAATGAAGTATTTAAAAAAATCAGTAGGGAACATTCCATATCTTGAATTTTCATTTTTATTATTGTCTTCTTTATTCAACTCAATTGAAACAAATCTAACCTCATTTTCCATTGCCTTCGATAAAATTAATTCAATTTTAGAATAGCCAAGTTAAAACCTAATTTTGATCCTTGAGGGATACTCGGCCTTCTAAGCAGTTTTATTACAACTTGACCACGTACACTTGCGTGACCCACATCAGCATCTTTCAATTTTCCAATGAAACCGCTTCTGTTTAGTAAATACAACGAGACATCTTTGAACAATCTTATTGATACAGTTGGTTTCCTTGAATGGTGTTCCAGTCAGAAAGTAAGTTGGGAAAAATCAGCTCTGTGAGCAGTCAACATCGATGCTTCCACTATCCAATCAACAGTTGATCGTATGGGTTGTACGACTGGTTCCATTCCATTCTGCATTCGCTTGCTTGGACTACCTCTAGGAGGTTATCCAGCAAAGCTAACCTTCTGGCAGCCTGTCATTGATAAAATTCATCTGAAACCGATCATTGGAATATGTATGATCTGTCTAGAGGTGGCTGCCTAATACTTTGCAATTTGGTTCTTGCTAACCTTCCAACCTATTATTTCTATTATTTATCTGTCTTCCAAATGTCGAGGTCAGCCAATTCTGTTCATTTTTTTCTGGGAAGGACAAAAGGGCAGCCAGCTGAACCACCTTGTGAAATGGAGCACCGCGTCAAAAGCTTTATCTGATGGGGGTCTTGGCTTGGACTGAAAAACGGGAACTTAGCCTTGTTGTTCAAGTGGAATTGGCGTGTTTTAAGGAACTGGAGGCGTTTTGCTGCAAGATCATCAAAAGTATACATGGCAGTGCCACTGATGAATTTCACTGGCCTCTGGGAAGTTTGGGCTTAGTTTATGCAGCCCATGGATTAGTATCTAAAAAGTATGGTCAAAATTTAATCATTTTGCAACCTTTAAATAGGGTGATGGAAGAAGAATTGCATTCTGGGAAGCTCCTTGGTGCTTGGAACAGCTACTAAAGCAGATTTTTCCTAATCTGACCATATTACCAACAAAGAAGGCAATGTATTCTCTCATTGGGACCCTGCAACTTCATCCTGGAATCTTTCTTTTTGACATGCTATAAGAATGAAGAAATTGCAGATTTCCGAGCACTTCTATCTAGCATCCATGGTAAAACTCGATCGTTTCTAACTGAGGCAAAACGATCTAACCAGTCATATGGAATCAAAACGATCGTTTCTAACTGCCTTGCATCCTCTCGAAAAGAACATCTATTGAGCAATATGGAAATCAAAAAGTCCCAAAAGAGCGAACGTTCTAATTTGGGTCATGCTTTTTGGATCCCTTAATTGCTCGGTCACTCTTCAATCAAAACTCCGAGGCCATGTCATTCCCCCTCCATTTTTCCATTTTGTAAAGCTTCTGGAGAGGATCTACAACTTCTTTTCTTTGAATGCTCATTCTCTGGTAAGTGTTGGTGGAAACTATTTTCCCTTTTTCACTTGCAATTGGTCTTTGGACAATCCTTCAAGGACAATGTGCTTCAAGTTCTCAGCAGTCCACATTTACCTCCAAAAGCACAAACGCTATAGTTTAATGTGGTTTAAGCCTTTCCTTCAAAAGCACAAACATCATAGTATAATGCAGTTGAAGCCTTTCTCTTAGAACTCTCGTTCGAATGAAATCAAGGAGTTTTTCATGACAAATTCTATGACTGGTTAGATCGTTTTGCCTCAGCTCGCCTTCTTGCTTCGTCTTGGTGCTCCGTATCTAAACTGTTTGGTGATTGCTTAATTTAAGACATTTGCCTCAATTGGACTGTGTTCATAACCTCTATCTAATTTCACTAGGTTCTTGTATTTTATGTTCCGATATTATGTTGGTAGGCCTCTTTTTGATATTCACCAGGTGTATTTTTCTTTTTCCTTTGAATCCCATTGTATGTACCATCTGAGTTCATGCCTCAGATTTTCATCAATACAATCTGTTTCCTTTTCAAAATAAATAAATAAAAATAAAGAAAGAAAAAGAAAAAGAGCGTTGTGTTCTATGTTTAAAGGTGCATAAAATGCTAGTTAACAACTGGTGTGCTTACCCTGTAGCTGTGTTTTGACAGGTGCTGGGTTGTCGTTCCTTGCGGGAGGTGCATTCGGTTGGACTTTTGGCCAAGAGATAGCAAATCATTGGTATCAACTCTACAGGCTGGACACAATGGCTGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGAGTGAGGGAAGTTCTTAAGACTCTGATTTGCAGTTGAAGCAGCGGAGCGCACACACTGCAGCTGCATCTAAAATAAAAATGTAAGTGCAACCTTGTTGAAATACAATGGTCGATTGGTTTGTGTTGTGATGAACTCTTCTTCCAACCTTTCAAGTTTAGAAAAGTACTGTCTCCTTTTTTATCTTCTGGAAATGACTCATTCATTTGCAAGCTCGTTAGAGAATGTACCCATCTTTACCAAATAACCCCAATTTTGGGTGGCTGTTAGGGTCTAAAGCATGTCCAAAATGGATACACATAGTTTTGTTGAAAGAATATTGGCTAAATTATATATAAATTGGATAACCTTGAAATGTGCTTAGGATAAAAAATAACTGCAAGGTTGCAATAATATGCTTG

mRNA sequence

ACGAGCTTTGAAGAGCGAGATTGGAGAGCTAGAAGAGAGAACAGTTTTCAGGATTCTGATTTCAATCGGATTTAGCTTCTAAAATCTCAATCTTAATCTGTTTTTTGAGGGAGCAATCATGGAAGATTCGTCCTCTCAATCCTTCTTCAGGAAGCACTGGGAAGGCTACAAGGAGTTTTGGTCCGAGAGATTCTCAATTCTCGACAACTATAGCCCCTACGTCCAGCGCCCGACCCCTCTTCCTTCATGGTCTTCCTCCGATGTCGAGGAATTTATTGCTTCTGACCCCGTTCATGGCCCCGTTTTAAAGACTGCCAGAGAGGCTGTAAACTTTGGTCTCACAGGAAGTGTTATTGGAGCTGTATCGACTGCAGGTGTTGCATGGAAATACTCAAAAAGTTTACATGGTGCTGGGTTGTCGTTCCTTGCGGGAGGTGCATTCGGTTGGACTTTTGGCCAAGAGATAGCAAATCATTGGTATCAACTCTACAGGCTGGACACAATGGCTGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGAGTGAGGGAAGTTCTTAAGACTCTGATTTGCAGTTGAAGCAGCGGAGCGCACACACTGCAGCTGCATCTAAAATAAAAATGTAAGTGCAACCTTGTTGAAATACAATGGTCGATTGGTTTGTGTTGTGATGAACTCTTCTTCCAACCTTTCAAGTTTAGAAAAGTACTGTCTCCTTTTTTATCTTCTGGAAATGACTCATTCATTTGCAAGCTCGTTAGAGAATGTACCCATCTTTACCAAATAACCCCAATTTTGGGTGGCTGTTAGGGTCTAAAGCATGTCCAAAATGGATACACATAGTTTTGTTGAAAGAATATTGGCTAAATTATATATAAATTGGATAACCTTGAAATGTGCTTAGGATAAAAAATAACTGCAAGGTTGCAATAATATGCTTG

Coding sequence (CDS)

ATGGAAGATTCGTCCTCTCAATCCTTCTTCAGGAAGCACTGGGAAGGCTACAAGGAGTTTTGGTCCGAGAGATTCTCAATTCTCGACAACTATAGCCCCTACGTCCAGCGCCCGACCCCTCTTCCTTCATGGTCTTCCTCCGATGTCGAGGAATTTATTGCTTCTGACCCCGTTCATGGCCCCGTTTTAAAGACTGCCAGAGAGGCTGTAAACTTTGGTCTCACAGGAAGTGTTATTGGAGCTGTATCGACTGCAGGTGTTGCATGGAAATACTCAAAAAGTTTACATGGTGCTGGGTTGTCGTTCCTTGCGGGAGGTGCATTCGGTTGGACTTTTGGCCAAGAGATAGCAAATCATTGGTATCAACTCTACAGGCTGGACACAATGGCTGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGAGTGAGGGAAGTTCTTAA

Protein sequence

MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHWYQLYRLDTMAAQVKFMEWWRNKSEGSS

Homology

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BLAST of Pay0008590 vs. ExPASy Swiss-Prot
Match: Q941A6 (Succinate dehydrogenase subunit 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH6 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 5.4e-56
Identity = 100/139 (71.94%), Postives = 115/139 (82.73%), Query Frame = 0


Query: 6   SQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHGPVLKT 65
           S+SF  K+W G K+FWS+R S  +NY+ + +R  PLPSWSSSDVEEFIASDPVHGP LKT
Sbjct: 4   SESFVGKNWNGLKDFWSDRLSFFENYTRFTKRDAPLPSWSSSDVEEFIASDPVHGPTLKT 63

Query: 66  AREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHWYQLYR 125
           AREAV FG+TG+ +GAVSTA  AWKYS+S HGA LSFL GG FGWTFGQE+ANH  QLY+
Sbjct: 64  AREAVTFGVTGAALGAVSTAAFAWKYSRSPHGAALSFLGGGVFGWTFGQEVANHTLQLYK 123

Query: 126 LDTMAAQVKFMEWWRNKSE 145
           LDTMAAQVKFMEWW  KS+
Sbjct: 124 LDTMAAQVKFMEWWERKSQ 142

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BLAST of Pay0008590 vs. ExPASy Swiss-Prot
Match: Q6ZCC4 (Succinate dehydrogenase subunit 6, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH6 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.1e-30
Identity = 61/135 (45.19%), Postives = 83/135 (61.48%), Query Frame = 0


Query: 12  KHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHGPVLKTAREAVN 71
           +H EG K  W++ FS LD +     R  PLP W+ +DV+EFIASDPV+GP LK  RE+  
Sbjct: 5   EHVEGIKAHWAKNFSFLDYFKKVYGRDKPLPKWTDADVDEFIASDPVYGPQLKAMRESRK 64

Query: 72  FGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHWYQLYRLDTMAA 131
           F L G+++G     G+A KYSK+ HG  L+   G   G   G E+A HWYQLY+ D   A
Sbjct: 65  FALGGALVGGAHLGGIALKYSKAPHGVVLATGFGAICGAVVGSEVAEHWYQLYKTDKQGA 124

Query: 132 QVKFMEWWRNKSEGS 147
            ++F+ WW +K  G+
Sbjct: 125 NLRFIYWWEDKVAGN 139

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BLAST of Pay0008590 vs. ExPASy TrEMBL
Match: A0A5D3DY28 (Succinate dehydrogenase subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00640 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.3e-80
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSEGSS 148
           YQLYRLDTMAAQVKFMEWWRNKSEGSS
Sbjct: 121 YQLYRLDTMAAQVKFMEWWRNKSEGSS 147

[Close]

BLAST of Pay0008590 vs. ExPASy TrEMBL
Match: A0A1S3BP04 (succinate dehydrogenase subunit 6, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103491959 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.3e-80
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSEGSS 148
           YQLYRLDTMAAQVKFMEWWRNKSEGSS
Sbjct: 121 YQLYRLDTMAAQVKFMEWWRNKSEGSS 147

[Close]

BLAST of Pay0008590 vs. ExPASy TrEMBL
Match: A0A6J1EGQ0 (succinate dehydrogenase subunit 6, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111434163 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 9.2e-75
Identity = 136/145 (93.79%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSP+VQR  PLPSWS SDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVQREKPLPSWSDSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGS+IGAVSTAGVAWKYS+SLHGAGLSFLAGGAFGWTFG EIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSLIGAVSTAGVAWKYSRSLHGAGLSFLAGGAFGWTFGHEIANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSEG 146
           YQLYR+DTM AQVKFMEWWRNKSEG
Sbjct: 121 YQLYRVDTMGAQVKFMEWWRNKSEG 145

[Close]

BLAST of Pay0008590 vs. ExPASy TrEMBL
Match: A0A6J1DK58 (succinate dehydrogenase subunit 6, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111020802 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.1e-74
Identity = 135/145 (93.10%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSILDNY+PYVQR  PLPSWSSSDVE FIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYAPYVQREKPLPSWSSSDVEAFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           P LKTAREAVNFGLTGSVIGAVSTAGVAWKYS+SLHGAGLSFLAGG FGWTFG E+ANHW
Sbjct: 61  PTLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGHEVANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSEG 146
           YQLYRLDTMAAQVKFMEWWRNK+EG
Sbjct: 121 YQLYRLDTMAAQVKFMEWWRNKNEG 145

[Close]

BLAST of Pay0008590 vs. ExPASy TrEMBL
Match: A0A6J1HQ77 (succinate dehydrogenase subunit 6, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111465621 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.6e-74
Identity = 135/144 (93.75%), Postives = 139/144 (96.53%), Query Frame = 0


Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSP+VQR  PLPSWS SDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVQREKPLPSWSDSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGS+IGAVSTAGVAWKYS+SLHGAGLSFLAGGAFGWTFG EIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSLIGAVSTAGVAWKYSRSLHGAGLSFLAGGAFGWTFGHEIANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSE 145
           YQLYR+DTM AQVKFMEWWRNKSE
Sbjct: 121 YQLYRVDTMGAQVKFMEWWRNKSE 144

[Close]

BLAST of Pay0008590 vs. NCBI nr
Match: XP_008450314.1 (PREDICTED: succinate dehydrogenase subunit 6, mitochondrial [Cucumis melo] >KAA0055944.1 succinate dehydrogenase subunit 6 [Cucumis melo var. makuwa] >TYK28150.1 succinate dehydrogenase subunit 6 [Cucumis melo var. makuwa])

HSP 1 Score: 307.4 bits (786), Expect = 6.8e-80
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSEGSS 148
           YQLYRLDTMAAQVKFMEWWRNKSEGSS
Sbjct: 121 YQLYRLDTMAAQVKFMEWWRNKSEGSS 147

[Close]

BLAST of Pay0008590 vs. NCBI nr
Match: XP_011660175.1 (succinate dehydrogenase subunit 6, mitochondrial [Cucumis sativus] >KAE8653538.1 hypothetical protein Csa_007645 [Cucumis sativus])

HSP 1 Score: 299.3 bits (765), Expect = 1.8e-77
Identity = 142/147 (96.60%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWS+RFSILDNYSPYVQR TPLPSWSSSDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYS+SLHGAGLSFLAGG FGWTFGQEIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSEGSS 148
           YQLYR+DTMAAQVKFMEWWRNKSEGSS
Sbjct: 121 YQLYRVDTMAAQVKFMEWWRNKSEGSS 147

[Close]

BLAST of Pay0008590 vs. NCBI nr
Match: XP_022927277.1 (succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita moschata] >XP_023531100.1 succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6588233.1 Succinate dehydrogenase subunit 6, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022147.1 Succinate dehydrogenase subunit 6, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 289.3 bits (739), Expect = 1.9e-74
Identity = 136/145 (93.79%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSP+VQR  PLPSWS SDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVQREKPLPSWSDSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGS+IGAVSTAGVAWKYS+SLHGAGLSFLAGGAFGWTFG EIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSLIGAVSTAGVAWKYSRSLHGAGLSFLAGGAFGWTFGHEIANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSEG 146
           YQLYR+DTM AQVKFMEWWRNKSEG
Sbjct: 121 YQLYRVDTMGAQVKFMEWWRNKSEG 145

[Close]

BLAST of Pay0008590 vs. NCBI nr
Match: XP_022153276.1 (succinate dehydrogenase subunit 6, mitochondrial [Momordica charantia])

HSP 1 Score: 288.1 bits (736), Expect = 4.2e-74
Identity = 135/145 (93.10%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSILDNY+PYVQR  PLPSWSSSDVE FIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYAPYVQREKPLPSWSSSDVEAFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           P LKTAREAVNFGLTGSVIGAVSTAGVAWKYS+SLHGAGLSFLAGG FGWTFG E+ANHW
Sbjct: 61  PTLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGHEVANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSEG 146
           YQLYRLDTMAAQVKFMEWWRNK+EG
Sbjct: 121 YQLYRLDTMAAQVKFMEWWRNKNEG 145

[Close]

BLAST of Pay0008590 vs. NCBI nr
Match: XP_022965868.1 (succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 287.0 bits (733), Expect = 9.5e-74
Identity = 135/144 (93.75%), Postives = 139/144 (96.53%), Query Frame = 0


Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSP+VQR  PLPSWS SDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVQREKPLPSWSDSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGS+IGAVSTAGVAWKYS+SLHGAGLSFLAGGAFGWTFG EIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSLIGAVSTAGVAWKYSRSLHGAGLSFLAGGAFGWTFGHEIANHW 120

Query: 121 YQLYRLDTMAAQVKFMEWWRNKSE 145
           YQLYR+DTM AQVKFMEWWRNKSE
Sbjct: 121 YQLYRVDTMGAQVKFMEWWRNKSE 144

[Close]

BLAST of Pay0008590 vs. TAIR 10
Match: AT1G08480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, plastid, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 218.4 bits (555), Expect = 3.8e-57
Identity = 100/139 (71.94%), Postives = 115/139 (82.73%), Query Frame = 0


Query: 6   SQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHGPVLKT 65
           S+SF  K+W G K+FWS+R S  +NY+ + +R  PLPSWSSSDVEEFIASDPVHGP LKT
Sbjct: 4   SESFVGKNWNGLKDFWSDRLSFFENYTRFTKRDAPLPSWSSSDVEEFIASDPVHGPTLKT 63

Query: 66  AREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHWYQLYR 125
           AREAV FG+TG+ +GAVSTA  AWKYS+S HGA LSFL GG FGWTFGQE+ANH  QLY+
Sbjct: 64  AREAVTFGVTGAALGAVSTAAFAWKYSRSPHGAALSFLGGGVFGWTFGQEVANHTLQLYK 123

Query: 126 LDTMAAQVKFMEWWRNKSE 145
           LDTMAAQVKFMEWW  KS+
Sbjct: 124 LDTMAAQVKFMEWWERKSQ 142

The following BLAST results are available for this feature:

BLAST of Pay0008590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q941A6	5.4e-56	71.94	Succinate dehydrogenase subunit 6, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q6ZCC4	5.1e-30	45.19	Succinate dehydrogenase subunit 6, mitochondrial OS=Oryza sativa subsp. japonica...	[more]

BLAST of Pay0008590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DY28	3.3e-80	100.00	Succinate dehydrogenase subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BP04	3.3e-80	100.00	succinate dehydrogenase subunit 6, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1EGQ0	9.2e-75	93.79	succinate dehydrogenase subunit 6, mitochondrial-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1DK58	2.1e-74	93.10	succinate dehydrogenase subunit 6, mitochondrial OS=Momordica charantia OX=3673 ...	[more]
A0A6J1HQ77	4.6e-74	93.75	succinate dehydrogenase subunit 6, mitochondrial-like OS=Cucurbita maxima OX=366...	[more]

BLAST of Pay0008590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450314.1	6.8e-80	100.00	PREDICTED: succinate dehydrogenase subunit 6, mitochondrial [Cucumis melo] >KAA0...	[more]
XP_011660175.1	1.8e-77	96.60	succinate dehydrogenase subunit 6, mitochondrial [Cucumis sativus] >KAE8653538.1...	[more]
XP_022927277.1	1.9e-74	93.79	succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita moschata] >XP_0...	[more]
XP_022153276.1	4.2e-74	93.10	succinate dehydrogenase subunit 6, mitochondrial [Momordica charantia]	[more]
XP_022965868.1	9.5e-74	93.75	succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita maxima]	[more]

BLAST of Pay0008590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08480.1	3.8e-57	71.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034574	Succinate dehydrogenase subunit 6, mitochondrial	PANTHER	PTHR36708	SUCCINATE DEHYDROGENASE SUBUNIT 6, MITOCHONDRIAL	coord: 3..145
None	No IPR available	PANTHER	PTHR36708:SF2	SUCCINATE DEHYDROGENASE SUBUNIT 6, MITOCHONDRIAL-LIKE	coord: 3..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0008590.1	Pay0008590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005749	mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
molecular_function	GO:0043495	protein-membrane adaptor activity