Pay0008194 (gene) Melon (Payzawat) v1

Overview


Name	Pay0008194
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Protein EARLY FLOWERING 4
Location	chr10: 9587345 .. 9587941 (+)
RNA-Seq Expression	Pay0008194
Synteny	Pay0008194

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTCTCTCTCTTTTACATCTTTATTCCCACGCGCTGTTAGTTTCGCGTGGGGCCAATGGCTCCACGTCCCGAGCTACACCGATAATGGTTCCTCTCAGTATTTAGTCATCACCACCGCCTTTTTCCCTTCTTCAATCAAACCTTTCCCTTTTTTTCAAAAAACTCAATCCAACTATCCAATACCAAACTACCCTTTTACTTTCATGGCCGATAACAATCCCCGCCGCAAATCCAAAATGAAGCCTTCAGCAACCACCACCACCACCACTACCACCACCACCAGCGACGACCCCCCACATGACGCTTTTCCTGACGAATACGACGCCGAGGTATGGGCCTCTTTTGACCAAACCTTCCGGCAAGTCCAATCAGTGCTGGACAGAAACAGAACTCTGATTCAACAAGTGAATGAGAATCACCAATCTCGAATCCCAAGCAACATGGTTGACAACGTTGCTTTAATCCAAGAACTTAATGGAAACATCTCTAAAGTTGTTTCCATGTACTCTGATTTCTCCTCTGATTTCTCCACTGCTTTCCATAACCACAAACCCAGAAGTGGTAAAAGAGGCACCACCAACCCAGATGCTTGA

mRNA sequence

ATGTATTCTCTCTCTTTTACATCTTTATTCCCACGCGCTGTTAGTTTCGCGTGGGGCCAATGGCTCCACGTCCCGAGCTACACCGATAATGGTTCCTCTCAGTATTTAGTCATCACCACCGCCTTTTTCCCTTCTTCAATCAAACCTTTCCCTTTTTTTCAAAAAACTCAATCCAACTATCCAATACCAAACTACCCTTTTACTTTCATGGCCGATAACAATCCCCGCCGCAAATCCAAAATGAAGCCTTCAGCAACCACCACCACCACCACTACCACCACCACCAGCGACGACCCCCCACATGACGCTTTTCCTGACGAATACGACGCCGAGGTATGGGCCTCTTTTGACCAAACCTTCCGGCAAGTCCAATCAGTGCTGGACAGAAACAGAACTCTGATTCAACAAGTGAATGAGAATCACCAATCTCGAATCCCAAGCAACATGGTTGACAACGTTGCTTTAATCCAAGAACTTAATGGAAACATCTCTAAAGTTGTTTCCATGTACTCTGATTTCTCCTCTGATTTCTCCACTGCTTTCCATAACCACAAACCCAGAAGTGGTAAAAGAGGCACCACCAACCCAGATGCTTGA

Coding sequence (CDS)

ATGTATTCTCTCTCTTTTACATCTTTATTCCCACGCGCTGTTAGTTTCGCGTGGGGCCAATGGCTCCACGTCCCGAGCTACACCGATAATGGTTCCTCTCAGTATTTAGTCATCACCACCGCCTTTTTCCCTTCTTCAATCAAACCTTTCCCTTTTTTTCAAAAAACTCAATCCAACTATCCAATACCAAACTACCCTTTTACTTTCATGGCCGATAACAATCCCCGCCGCAAATCCAAAATGAAGCCTTCAGCAACCACCACCACCACCACTACCACCACCACCAGCGACGACCCCCCACATGACGCTTTTCCTGACGAATACGACGCCGAGGTATGGGCCTCTTTTGACCAAACCTTCCGGCAAGTCCAATCAGTGCTGGACAGAAACAGAACTCTGATTCAACAAGTGAATGAGAATCACCAATCTCGAATCCCAAGCAACATGGTTGACAACGTTGCTTTAATCCAAGAACTTAATGGAAACATCTCTAAAGTTGTTTCCATGTACTCTGATTTCTCCTCTGATTTCTCCACTGCTTTCCATAACCACAAACCCAGAAGTGGTAAAAGAGGCACCACCAACCCAGATGCTTGA

Protein sequence

MYSLSFTSLFPRAVSFAWGQWLHVPSYTDNGSSQYLVITTAFFPSSIKPFPFFQKTQSNYPIPNYPFTFMADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSGKRGTTNPDA

Homology

[Close]

BLAST of Pay0008194 vs. ExPASy Swiss-Prot
Match: O04211 (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22
Identity = 53/77 (68.83%), Postives = 63/77 (81.82%), Query Frame = 0


Query: 109 DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVS 168
           D  +W + D+ FRQVQSVLDRNR+LIQQVN+NHQSR+  NM  NVALIQELNGNISKVV+
Sbjct: 22  DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 169 MYSDFSSDFSTAFHNHK 186
           MYSD ++ FS+ FH  K
Sbjct: 82  MYSDLNTSFSSGFHGGK 98

[Close]

BLAST of Pay0008194 vs. ExPASy Swiss-Prot
Match: O80877 (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.1e-15
Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 0


Query: 109 DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVS 168
           D EVW +    F++ Q  LD+NR LIQ+VNENH SRIP N+  NV LI E+NGNIS+V+ 
Sbjct: 34  DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVME 93

Query: 169 MYSDFSSDFSTAFHNHKPRSGKRGTT 195
           +YSD S +F+  F + + R+ K G T
Sbjct: 94  IYSDLSLNFAKKF-DQRRRTTKDGDT 118

[Close]

BLAST of Pay0008194 vs. ExPASy Swiss-Prot
Match: Q8S8F5 (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.8e-13
Identity = 35/89 (39.33%), Postives = 57/89 (64.04%), Query Frame = 0


Query: 107 EYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKV 166
           + D ++  +F+++F QVQ++LD NR LI ++N+NH+S+IP N+  NV LI+ELN N+ +V
Sbjct: 15  QMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRNVGLIRELNNNVRRV 74

Query: 167 VSMYSDFSSDFSTAFHNHKPRSGKRGTTN 196
             +Y D S++FS +           G  N
Sbjct: 75  AHLYVDLSNNFSKSMEASSEGDSSEGRGN 103

[Close]

BLAST of Pay0008194 vs. ExPASy Swiss-Prot
Match: Q570U6 (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 109 DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVS 168
           D ++  SF ++F  VQ +LD+NR LI ++N+NH+S+ P N+  NV LI+ELN NI +V S
Sbjct: 16  DGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNVGLIKELNNNIRRVAS 75

Query: 169 MYSDFSSDFS 179
           +Y D S  F+
Sbjct: 76  LYGDLSHSFA 85

[Close]

BLAST of Pay0008194 vs. ExPASy Swiss-Prot
Match: Q94BS8 (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.6e-10
Identity = 33/80 (41.25%), Postives = 52/80 (65.00%), Query Frame = 0


Query: 101 HDAFPDEY--DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQE 160
           +  F + Y  D ++  +F ++F QVQ +LD+NR LI ++N+NH+S+   ++  NV LI+E
Sbjct: 10  YSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNVGLIRE 69

Query: 161 LNGNISKVVSMYSDFSSDFS 179
           LN NI  V S+Y D S  F+
Sbjct: 70  LNNNIRTVASLYGDLSHSFA 89

[Close]

BLAST of Pay0008194 vs. ExPASy TrEMBL
Match: A0A1S3CIT1 (uncharacterized protein LOC103501440 OS=Cucumis melo OX=3656 GN=LOC103501440 PE=3 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.2e-106
Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   MYSLSFTSLFPRAVSFAWGQWLHVPSYTDNGSSQYLVITTAFFPSSIKPFPFFQKTQSNY 60
           MYSLSFTSLFPRAVSFAWGQWLHVPSYTDNGSSQYLVITTAFFPSSIKPFPFFQKTQSNY
Sbjct: 1   MYSLSFTSLFPRAVSFAWGQWLHVPSYTDNGSSQYLVITTAFFPSSIKPFPFFQKTQSNY 60

Query: 61  PIPNYPFTFMADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTF 120
           PIPNYPF FMADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTF
Sbjct: 61  PIPNYPFPFMADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTF 120

Query: 121 RQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTA 180
           RQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTA
Sbjct: 121 RQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTA 180

Query: 181 FHNHKPRSGKRGTTNPDA 199
           FHNHKPRSGKRGTTNPDA
Sbjct: 181 FHNHKPRSGKRGTTNPDA 198

[Close]

BLAST of Pay0008194 vs. ExPASy TrEMBL
Match: A0A5A7SR92 (Protein EARLY FLOWERING 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00230 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 5.8e-64
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 70  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDR 129
           MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDR
Sbjct: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDR 60

Query: 130 NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSG 189
           NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSG
Sbjct: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSG 120

Query: 190 KRGTTNPDA 199
           KRGTTNPDA
Sbjct: 121 KRGTTNPDA 129

[Close]

BLAST of Pay0008194 vs. ExPASy TrEMBL
Match: A0A0A0KM35 (Elf4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G202370 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.7e-61
Identity = 125/129 (96.90%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 70  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDR 129
           MADNNPRRKSKMKPSATTTTTTTTTTSDD PH AFPDEYD EVWASFDQTFRQVQSVLDR
Sbjct: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDR 60

Query: 130 NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSG 189
           NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPR+G
Sbjct: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTG 120

Query: 190 KRGTTNPDA 199
           KRGTTNPDA
Sbjct: 121 KRGTTNPDA 129

[Close]

BLAST of Pay0008194 vs. ExPASy TrEMBL
Match: A0A6J1GYX8 (protein EARLY FLOWERING 4-like OS=Cucurbita moschata OX=3662 GN=LOC111458427 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 6.0e-53
Identity = 113/129 (87.60%), Postives = 120/129 (93.02%), Query Frame = 0


Query: 70  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDR 129
           MAD NPRRKSK KPSATTTTTTTTTTSDD  HD FPDE DA+VWASFDQTFRQVQSVLDR
Sbjct: 1   MADINPRRKSKTKPSATTTTTTTTTTSDDGRHDGFPDECDAQVWASFDQTFRQVQSVLDR 60

Query: 130 NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSG 189
           NR LIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS+ F+N+K R+G
Sbjct: 61  NRVLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSGFNNNKSRNG 120

Query: 190 KRGTTNPDA 199
           KRG++NPDA
Sbjct: 121 KRGSSNPDA 129

[Close]

BLAST of Pay0008194 vs. ExPASy TrEMBL
Match: A0A6J1IH33 (protein EARLY FLOWERING 4-like OS=Cucurbita maxima OX=3661 GN=LOC111477159 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.1e-51
Identity = 111/129 (86.05%), Postives = 118/129 (91.47%), Query Frame = 0


Query: 70  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDR 129
           MA+ N RRKSK KPSATTTTTTTTTTSDD  HD FPDE D +VWASFDQTFRQVQSVLDR
Sbjct: 1   MAEINHRRKSKTKPSATTTTTTTTTTSDDGRHDGFPDECDPQVWASFDQTFRQVQSVLDR 60

Query: 130 NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSG 189
           NR LIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS+ F+NHK R+G
Sbjct: 61  NRVLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSGFNNHKSRNG 120

Query: 190 KRGTTNPDA 199
           KRG++NPDA
Sbjct: 121 KRGSSNPDA 129

[Close]

BLAST of Pay0008194 vs. NCBI nr
Match: XP_008463236.2 (PREDICTED: uncharacterized protein LOC103501440 [Cucumis melo])

HSP 1 Score: 395.6 bits (1015), Expect = 2.5e-106
Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   MYSLSFTSLFPRAVSFAWGQWLHVPSYTDNGSSQYLVITTAFFPSSIKPFPFFQKTQSNY 60
           MYSLSFTSLFPRAVSFAWGQWLHVPSYTDNGSSQYLVITTAFFPSSIKPFPFFQKTQSNY
Sbjct: 1   MYSLSFTSLFPRAVSFAWGQWLHVPSYTDNGSSQYLVITTAFFPSSIKPFPFFQKTQSNY 60

Query: 61  PIPNYPFTFMADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTF 120
           PIPNYPF FMADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTF
Sbjct: 61  PIPNYPFPFMADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTF 120

Query: 121 RQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTA 180
           RQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTA
Sbjct: 121 RQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTA 180

Query: 181 FHNHKPRSGKRGTTNPDA 199
           FHNHKPRSGKRGTTNPDA
Sbjct: 181 FHNHKPRSGKRGTTNPDA 198

[Close]

BLAST of Pay0008194 vs. NCBI nr
Match: KAA0031907.1 (protein EARLY FLOWERING 4 [Cucumis melo var. makuwa] >TYK27472.1 protein EARLY FLOWERING 4 [Cucumis melo var. makuwa])

HSP 1 Score: 253.8 bits (647), Expect = 1.2e-63
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 70  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDR 129
           MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDR
Sbjct: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDR 60

Query: 130 NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSG 189
           NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSG
Sbjct: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSG 120

Query: 190 KRGTTNPDA 199
           KRGTTNPDA
Sbjct: 121 KRGTTNPDA 129

[Close]

BLAST of Pay0008194 vs. NCBI nr
Match: XP_004149248.1 (protein EARLY FLOWERING 4 [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 5.5e-61
Identity = 125/129 (96.90%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 70  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDR 129
           MADNNPRRKSKMKPSATTTTTTTTTTSDD PH AFPDEYD EVWASFDQTFRQVQSVLDR
Sbjct: 1   MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDR 60

Query: 130 NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSG 189
           NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPR+G
Sbjct: 61  NRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTG 120

Query: 190 KRGTTNPDA 199
           KRGTTNPDA
Sbjct: 121 KRGTTNPDA 129

[Close]

BLAST of Pay0008194 vs. NCBI nr
Match: XP_038892867.1 (protein EARLY FLOWERING 4-like [Benincasa hispida])

HSP 1 Score: 228.0 bits (580), Expect = 7.0e-56
Identity = 121/131 (92.37%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 70  MADNNPRRKSKMKPSA-TTTTTTTTTTSDDPPHDA-FPDEYDAEVWASFDQTFRQVQSVL 129
           MADNNPRRKSKMKPSA TTTTTTTTTTSDD PHD  FPDEYDAEVWASFDQTFRQVQSVL
Sbjct: 1   MADNNPRRKSKMKPSATTTTTTTTTTTSDDGPHDGDFPDEYDAEVWASFDQTFRQVQSVL 60

Query: 130 DRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPR 189
           DRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS+AF NHKPR
Sbjct: 61  DRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSAFSNHKPR 120

Query: 190 SGKRGTTNPDA 199
           +GKRG+ NP+A
Sbjct: 121 NGKRGSNNPNA 131

[Close]

BLAST of Pay0008194 vs. NCBI nr
Match: KAE8648025.1 (hypothetical protein Csa_005775 [Cucumis sativus])

HSP 1 Score: 223.4 bits (568), Expect = 1.7e-54
Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 81  MKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNEN 140
           MKPSATTTTTTTTTTSDD PH AFPDEYD EVWASFDQTFRQVQSVLDRNRTLIQQVNEN
Sbjct: 1   MKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNEN 60

Query: 141 HQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSGKRGTTNPDA 199
           HQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPR+GKRGTTNPDA
Sbjct: 61  HQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTGKRGTTNPDA 118

[Close]

BLAST of Pay0008194 vs. TAIR 10
Match: AT2G40080.1 (Protein of unknown function (DUF1313) )

HSP 1 Score: 108.2 bits (269), Expect = 7.6e-24
Identity = 53/77 (68.83%), Postives = 63/77 (81.82%), Query Frame = 0


Query: 109 DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVS 168
           D  +W + D+ FRQVQSVLDRNR+LIQQVN+NHQSR+  NM  NVALIQELNGNISKVV+
Sbjct: 22  DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 169 MYSDFSSDFSTAFHNHK 186
           MYSD ++ FS+ FH  K
Sbjct: 82  MYSDLNTSFSSGFHGGK 98

[Close]

BLAST of Pay0008194 vs. TAIR 10
Match: AT2G29950.1 (ELF4-like 1 )

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-16
Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 0


Query: 109 DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVS 168
           D EVW +    F++ Q  LD+NR LIQ+VNENH SRIP N+  NV LI E+NGNIS+V+ 
Sbjct: 34  DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVME 93

Query: 169 MYSDFSSDFSTAFHNHKPRSGKRGTT 195
           +YSD S +F+  F + + R+ K G T
Sbjct: 94  IYSDLSLNFAKKF-DQRRRTTKDGDT 118

[Close]

BLAST of Pay0008194 vs. TAIR 10
Match: AT2G06255.1 (ELF4-like 3 )

HSP 1 Score: 75.9 bits (185), Expect = 4.2e-14
Identity = 35/89 (39.33%), Postives = 57/89 (64.04%), Query Frame = 0


Query: 107 EYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKV 166
           + D ++  +F+++F QVQ++LD NR LI ++N+NH+S+IP N+  NV LI+ELN N+ +V
Sbjct: 15  QMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRNVGLIRELNNNVRRV 74

Query: 167 VSMYSDFSSDFSTAFHNHKPRSGKRGTTN 196
             +Y D S++FS +           G  N
Sbjct: 75  AHLYVDLSNNFSKSMEASSEGDSSEGRGN 103

[Close]

BLAST of Pay0008194 vs. TAIR 10
Match: AT1G17455.1 (ELF4-like 4 )

HSP 1 Score: 71.6 bits (174), Expect = 7.8e-13
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 109 DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVS 168
           D ++  SF ++F  VQ +LD+NR LI ++N+NH+S+ P N+  NV LI+ELN NI +V S
Sbjct: 16  DGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNVGLIKELNNNIRRVAS 75

Query: 169 MYSDFSSDFS 179
           +Y D S  F+
Sbjct: 76  LYGDLSHSFA 85

[Close]

BLAST of Pay0008194 vs. TAIR 10
Match: AT1G17455.2 (ELF4-like 4 )

HSP 1 Score: 71.6 bits (174), Expect = 7.8e-13
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 109 DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVS 168
           D ++  SF ++F  VQ +LD+NR LI ++N+NH+S+ P N+  NV LI+ELN NI +V S
Sbjct: 16  DGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNVGLIKELNNNIRRVAS 75

Query: 169 MYSDFSSDFS 179
           +Y D S  F+
Sbjct: 76  LYGDLSHSFA 85

The following BLAST results are available for this feature:

BLAST of Pay0008194 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04211	1.1e-22	68.83	Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1	[more]
O80877	2.1e-15	51.16	Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1	[more]
Q8S8F5	5.8e-13	39.33	Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1	[more]
Q570U6	1.1e-11	47.14	Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1	[more]
Q94BS8	4.6e-10	41.25	Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1	[more]

BLAST of Pay0008194 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CIT1	1.2e-106	99.49	uncharacterized protein LOC103501440 OS=Cucumis melo OX=3656 GN=LOC103501440 PE=...	[more]
A0A5A7SR92	5.8e-64	100.00	Protein EARLY FLOWERING 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0KM35	2.7e-61	96.90	Elf4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G202370 PE=3 S...	[more]
A0A6J1GYX8	6.0e-53	87.60	protein EARLY FLOWERING 4-like OS=Cucurbita moschata OX=3662 GN=LOC111458427 PE=...	[more]
A0A6J1IH33	1.1e-51	86.05	protein EARLY FLOWERING 4-like OS=Cucurbita maxima OX=3661 GN=LOC111477159 PE=3 ...	[more]

BLAST of Pay0008194 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463236.2	2.5e-106	99.49	PREDICTED: uncharacterized protein LOC103501440 [Cucumis melo]	[more]
KAA0031907.1	1.2e-63	100.00	protein EARLY FLOWERING 4 [Cucumis melo var. makuwa] >TYK27472.1 protein EARLY F...	[more]
XP_004149248.1	5.5e-61	96.90	protein EARLY FLOWERING 4 [Cucumis sativus]	[more]
XP_038892867.1	7.0e-56	92.37	protein EARLY FLOWERING 4-like [Benincasa hispida]	[more]
KAE8648025.1	1.7e-54	96.61	hypothetical protein Csa_005775 [Cucumis sativus]	[more]

BLAST of Pay0008194 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40080.1	7.6e-24	68.83	Protein of unknown function (DUF1313)	[more]
AT2G29950.1	1.5e-16	51.16	ELF4-like 1	[more]
AT2G06255.1	4.2e-14	39.33	ELF4-like 3	[more]
AT1G17455.1	7.8e-13	47.14	ELF4-like 4	[more]
AT1G17455.2	7.8e-13	47.14	ELF4-like 4	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009741	Protein EARLY FLOWERING 4 domain	PFAM	PF07011	Elf4	coord: 108..185 e-value: 5.1E-37 score: 125.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..99
None	No IPR available	PANTHER	PTHR33469:SF5	PROTEIN EARLY FLOWERING 4	coord: 80..190
IPR040462	Protein EARLY FLOWERING 4	PANTHER	PTHR33469	PROTEIN ELF4-LIKE 4	coord: 80..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0008194.1	Pay0008194.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009649	entrainment of circadian clock
biological_process	GO:0000122	negative regulation of transcription by RNA polymerase II
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0042753	positive regulation of circadian rhythm
biological_process	GO:0010017	red or far-red light signaling pathway
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0010114	response to red light
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription regulator complex
molecular_function	GO:0042803	protein homodimerization activity