Pay0007639 (gene) Melon (Payzawat) v1

Overview


Name	Pay0007639
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Location	chr02: 15817119 .. 15819012 (-)
RNA-Seq Expression	Pay0007639
Synteny	Pay0007639

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATAGAACTCTGAAGAAGACTTATTGGTGGTCTGGTATGAAGCGAGAGATAGTTGAATATGTCGATAGATGTTTGATCTGTCAACAGGTTAAACCAGTGAGGTAGAGGCCAGAAGGACTCCTTAGTCCCCTGCCAGTGCCAGAGTGGAAGTGGGAGCATATTACCATGGATTTTCTGTTTAGATTACCCTGTACATCTAGAAGATATGATGGTATATGGGTAATAGTAGATAGACTCACCAAGACAGCGCGGTTTATACCGATTAAAGCGACGCCTACACTAGATCAGCTAGCTAAGTTATACGTCGACAGGATTGTGAGTCAATATGGAGTGCTTAGTGTTCATAGTTTCAGATAGGGACCCGAGGTTTACTTCTAAGTTTTGGCCTAGTGTGCAAAAAGCAATGGGAACAAAGTTGAAGTTCAGTACCGCGTTCCATCCCCAGACAGATGGTCAGTCAGAGAGGACCATCCAAACCTTAGAAGAAATGTTGAGAGCATGTGTCCTTCAGTTTAAGGGAAATTGGGATACCCACTTATCACTTATGGAGTTCGCTTATAATAACAGCTACCAGTTTAGTATCGGCATGGCACCATTTGAGGCTTTGTATGGCAGACCATGCAGGACTCCTGTGTGCTGGAACGAAGTGGGAGAACGAAAGCTAGTGGTCCTGAGTTAGTACAAGTTACGTCAGAAAATATTAAGTTGATTAGGGAAAATCTAAAAATAGCTCAGGATCGACAGAAGAGCTATGCAGGTAACCGACGAAGAGACTTAGAGTTCCAGATTGGAGAACAAGTTTTCTTAAAGTTATCTCCGTGGAGGGGTGTTCTTCGTTTTGAGAGGAAAGGTAAGTTAAGTCCTAGATATATTGGTCCGTACCAAATAATAGAACGAGTTGGACCAGCAGCCTATAGACTTGAATTGCCAGCGGAACTCGCTTGAATACATGATGTTTTTTCATGTGTCCATGTTGAGGAAATATATTTCAGATCCATTACAAGTGTTGCAAGTACAACCAATTGAACTAAAAGAAGACTTCAGTTATAGAGAGGAAGCAGTTTAGATTCTCGACAGGAAGGAGCAAGTTTTGAGGAACAAAACGATCCGGCTCGTGAAAGTTCTTTGGAGACATCATGGAATAGAGGAGGCAACCTGAGAATCAGAAGATCAAATGAGGAGGAGTTACCCAACACTCTTCACCTAAGGACTTCTAAATTTCGAGGACGAAATTTCATAAGGGAGAGGTAAGTTGTAAACCCGAGATTTCCCTAGGATCATTTTCTCTTGTCATCATAGTTTGGATTACTAAGCTAAAAGAAGAAAAAAAAAGAGAAAAGAAAGGAAGTGGAATTGGACAGCAAGCCCACCACCGCAAGCCCATTTGTTTTTTCAGCCTAATTTCATTTCTTTCCTCCATCATTTTCCATCCAAACATTTAGAGCACTTTGAGGAGAGAGTAAAGGAAGAAGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAAAAGATAGGAAAAAGTTCCTGCAAAGCCAGCCATTGCAGAATCTGGGTGCAACTGTCAACCTCTGGTTGTTTTGTTCGGTTTGAGCTATCTAGAAAGAACTAAGAGGTGAGGTTTTATTTTCTTGAAAGTTAGTTTATTTTCTAACAAATTTCATGAAGGAAGCTTGAGCTGAATAGTATGAGAAGTTAATGATTTTCGAAATGGAAAACAGAGCACAGGAATTTCGAGCAAACCAGAAGGATTTCTGGTGTTCTCTGATGCTTTGAGTATTCTGGAAGTGCATAAGTCGAATCAGAAGCTCTATTTGGTATGGTTAGAAAGTTTATTCAATGTCCTACAACGTTCATGAAGATTTTGTGAGCCAAAAATGACTTTAAGTGGGGTTAA

mRNA sequence

ATGTATAGAACTCTGAAGAAGACTTATTGGTGGTCTGGTATGAAGCGAGAGATAGTTGAATATGTCGATAGATGTTTGATCTGTCAACAGGTTAAACCATGGAAGTGGGAGCATATTACCATGGATTTTCTGTTTAGATTACCCTGTACATCTAGAAGATATGATGGTATATGGGTAATAGTAGATAGACTCACCAAGACAGCGCGGTTTATACCGATTAAAGCGACGCCTACACTAGATCAGCTAGCTAAGTTATACGTCGACAGGATTACCATGCAGGACTCCTGTGTGCTGGAACGAAGTGGGAGAACGAAAGCTAGTGGTCCTGAGTTAGTACAAGTTACGTCAGAAAATATTAAGTTGATTAGGGAAAATCTAAAAATAGCTCAGGATCGACAGAAGAGCTATGCAGGTAACCGACGAAGAGACTTAGAGTTCCAGATTGGAGAACAAGTTTTCTTAAAGTTATCTCCGTGGAGGGGTGTTCTTCGTTTTGAGAGGAAAGATCCATTACAAGTGTTGCAAGTACAACCAATTGAACTAAAAGAAGACTTCAGTTATAGAGAGGAAGCAAGCACAGGAATTTCGAGCAAACCAGAAGGATTTCTGGTGTTCTCTGATGCTTTGAGTATTCTGGAAGTGCATAAGTCGAATCAGAAGCTCTATTTGTGGGGTTAA

Coding sequence (CDS)

ATGTATAGAACTCTGAAGAAGACTTATTGGTGGTCTGGTATGAAGCGAGAGATAGTTGAATATGTCGATAGATGTTTGATCTGTCAACAGGTTAAACCATGGAAGTGGGAGCATATTACCATGGATTTTCTGTTTAGATTACCCTGTACATCTAGAAGATATGATGGTATATGGGTAATAGTAGATAGACTCACCAAGACAGCGCGGTTTATACCGATTAAAGCGACGCCTACACTAGATCAGCTAGCTAAGTTATACGTCGACAGGATTACCATGCAGGACTCCTGTGTGCTGGAACGAAGTGGGAGAACGAAAGCTAGTGGTCCTGAGTTAGTACAAGTTACGTCAGAAAATATTAAGTTGATTAGGGAAAATCTAAAAATAGCTCAGGATCGACAGAAGAGCTATGCAGGTAACCGACGAAGAGACTTAGAGTTCCAGATTGGAGAACAAGTTTTCTTAAAGTTATCTCCGTGGAGGGGTGTTCTTCGTTTTGAGAGGAAAGATCCATTACAAGTGTTGCAAGTACAACCAATTGAACTAAAAGAAGACTTCAGTTATAGAGAGGAAGCAAGCACAGGAATTTCGAGCAAACCAGAAGGATTTCTGGTGTTCTCTGATGCTTTGAGTATTCTGGAAGTGCATAAGTCGAATCAGAAGCTCTATTTGTGGGGTTAA

Protein sequence

MYRTLKKTYWWSGMKREIVEYVDRCLICQQVKPWKWEHITMDFLFRLPCTSRRYDGIWVIVDRLTKTARFIPIKATPTLDQLAKLYVDRITMQDSCVLERSGRTKASGPELVQVTSENIKLIRENLKIAQDRQKSYAGNRRRDLEFQIGEQVFLKLSPWRGVLRFERKDPLQVLQVQPIELKEDFSYREEASTGISSKPEGFLVFSDALSILEVHKSNQKLYLWG

Homology

[Close]

BLAST of Pay0007639 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.9e-08
Identity = 31/100 (31.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 7    KTYWWSGMKREIVEYVDRCLICQ-----QVKPW-----------KWEHITMDFLFRLPCT 66
            + + W G++++I EYV  C  CQ       KP+            WE ++MDF+  LP  
Sbjct: 939  RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP-E 998

Query: 67   SRRYDGIWVIVDRLTKTARFIPIKATPTLDQLAKLYVDRI 91
            S  Y+ ++V+VDR +K A  +P   + T +Q A+++  R+
Sbjct: 999  SSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRV 1037

[Close]

BLAST of Pay0007639 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.9e-08
Identity = 31/100 (31.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 7    KTYWWSGMKREIVEYVDRCLICQ-----QVKPW-----------KWEHITMDFLFRLPCT 66
            + + W G++++I EYV  C  CQ       KP+            WE ++MDF+  LP  
Sbjct: 939  RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP-E 998

Query: 67   SRRYDGIWVIVDRLTKTARFIPIKATPTLDQLAKLYVDRI 91
            S  Y+ ++V+VDR +K A  +P   + T +Q A+++  R+
Sbjct: 999  SSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRV 1037

[Close]

BLAST of Pay0007639 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.9e-08
Identity = 31/100 (31.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 7    KTYWWSGMKREIVEYVDRCLICQ-----QVKPW-----------KWEHITMDFLFRLPCT 66
            + + W G++++I EYV  C  CQ       KP+            WE ++MDF+  LP  
Sbjct: 939  RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP-E 998

Query: 67   SRRYDGIWVIVDRLTKTARFIPIKATPTLDQLAKLYVDRI 91
            S  Y+ ++V+VDR +K A  +P   + T +Q A+++  R+
Sbjct: 999  SSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRV 1037

[Close]

BLAST of Pay0007639 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.9e-08
Identity = 31/100 (31.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 7    KTYWWSGMKREIVEYVDRCLICQ-----QVKPW-----------KWEHITMDFLFRLPCT 66
            + + W G++++I EYV  C  CQ       KP+            WE ++MDF+  LP  
Sbjct: 939  RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP-E 998

Query: 67   SRRYDGIWVIVDRLTKTARFIPIKATPTLDQLAKLYVDRI 91
            S  Y+ ++V+VDR +K A  +P   + T +Q A+++  R+
Sbjct: 999  SSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRV 1037

[Close]

BLAST of Pay0007639 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.9e-08
Identity = 31/100 (31.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 7    KTYWWSGMKREIVEYVDRCLICQ-----QVKPW-----------KWEHITMDFLFRLPCT 66
            + + W G++++I EYV  C  CQ       KP+            WE ++MDF+  LP  
Sbjct: 939  RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP-E 998

Query: 67   SRRYDGIWVIVDRLTKTARFIPIKATPTLDQLAKLYVDRI 91
            S  Y+ ++V+VDR +K A  +P   + T +Q A+++  R+
Sbjct: 999  SSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRV 1037

[Close]

BLAST of Pay0007639 vs. ExPASy TrEMBL
Match: A0A5D3CSJ5 (Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G00060 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.9e-101
Identity = 201/243 (82.72%), Postives = 204/243 (83.95%), Query Frame = 0


Query: 1   MYRTLKKTYWWSGMKREIVEYVDRCLICQQVKPWKWEHITMDFLFRLPCTSRRYDGIWVI 60
           +YRTLKKTYWWSGMKREIVEYVDRCLICQQVKP            RLP TSRRYDGIWVI
Sbjct: 509 VYRTLKKTYWWSGMKREIVEYVDRCLICQQVKP-----------VRLPRTSRRYDGIWVI 568

Query: 61  VDRLTKTARFIPIKATPTLDQLAKLYVDRITMQDSCVLERSGRTKASGPELVQVTSENIK 120
           VDRLTKT +FIPIK T TLDQLAKLYVDRI   DSCVLERSGRTKASGPELVQVTSENIK
Sbjct: 569 VDRLTKTVQFIPIKPTSTLDQLAKLYVDRI---DSCVLERSGRTKASGPELVQVTSENIK 628

Query: 121 LIRENLKIAQDRQKSYAGNRRRDLEFQIGEQVFLKLSPWRGVLRFERKDPLQVLQVQPIE 180
           LIRENLKIAQDRQKSYAGNRRRDLEFQIGEQVFLKLSPWRGVLRFERKDPLQVLQVQPIE
Sbjct: 629 LIRENLKIAQDRQKSYAGNRRRDLEFQIGEQVFLKLSPWRGVLRFERKDPLQVLQVQPIE 688

Query: 181 LKEDFSYREEA--------------------STGISSKPEGFLVFSDALSILEVHKSNQK 224
           LKEDFSYREEA                    STGISSKP+GFLVFSDALSILEVHKSNQK
Sbjct: 689 LKEDFSYREEAVQILDRKEQVLRNKTIRLVKSTGISSKPKGFLVFSDALSILEVHKSNQK 737

[Close]

BLAST of Pay0007639 vs. ExPASy TrEMBL
Match: A0A1S3CAP1 (uncharacterized protein LOC103498328 OS=Cucumis melo OX=3656 GN=LOC103498328 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.9e-97
Identity = 190/248 (76.61%), Postives = 194/248 (78.23%), Query Frame = 0


Query: 1   MYRTLKKTYWWSGMKREIVEYVDRCLICQQVKP----------------WKWEHITMDFL 60
           MYRTLKKTYWW GMKREI EYVDRCLICQ VKP                WKWEHIT+DFL
Sbjct: 1   MYRTLKKTYWWPGMKREIAEYVDRCLICQLVKPVRQRLGGLLNPLPMPEWKWEHITIDFL 60

Query: 61  FRLPCTSRRYDGIWVIVDRLTKTARFIPIKATPTLDQLAKLYVDRITMQDSCVLERSGRT 120
           F LPCTSR YDGIWVIVDRLTK ARFIPIKAT TLDQLAKLYVDRIT QDS      G  
Sbjct: 61  FGLPCTSRGYDGIWVIVDRLTKIARFIPIKATSTLDQLAKLYVDRITTQDSVCWNEVGER 120

Query: 121 KASGPELVQVTSENIKLIRENLKIAQDRQKSYAGNRRRDLEFQIGEQVFLKLSPWRGVLR 180
           K  GPEL+QVT +NIKLIRENLKIAQDRQKSYA  RRRDLEFQIGEQVFLKLSPWRGVLR
Sbjct: 121 KLVGPELLQVTLDNIKLIRENLKIAQDRQKSYADKRRRDLEFQIGEQVFLKLSPWRGVLR 180

Query: 181 FERKDPLQVLQVQPIELKEDFSYREEA---------STGISSKPEGFLVFSDALSILEVH 224
           F RKDP  VLQVQP ELKED SYREEA         STG SSKP GFLVFS+ALSILEV 
Sbjct: 181 FGRKDPSHVLQVQPFELKEDLSYREEAVQILDRKEQSTGFSSKPGGFLVFSEALSILEVQ 240

[Close]

BLAST of Pay0007639 vs. ExPASy TrEMBL
Match: A0A5A7TKT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G004880 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 3.0e-77
Identity = 166/253 (65.61%), Postives = 173/253 (68.38%), Query Frame = 0


Query: 1    MYRTLKKTYWWSGMKREIVEYVDRCLICQQVKP----------------WKWEHITMDFL 60
            MYRTLKKTYWW GMKR+I EYVDRCLICQQVKP                WKW+HITMDFL
Sbjct: 1183 MYRTLKKTYWWPGMKRQIAEYVDRCLICQQVKPMRQRPGGLLNLLPVPEWKWKHITMDFL 1242

Query: 61   FRLPCTSRRYDGIWVIVDRLTKTARFIPIKATPTLDQLAKLYVDRITMQD----SCVLER 120
            F LP TSR YDGIWVI DRLTKTARFIPIKA  TLDQLAKLYVDRI  Q     S V +R
Sbjct: 1243 FGLPRTSRGYDGIWVIADRLTKTARFIPIKAMSTLDQLAKLYVDRIVSQHGVPVSIVSDR 1302

Query: 121  SGRT----------KASGPELVQVTSENIKLIRENLKIAQDRQKSYAGNRRRDLEFQIGE 180
              RT          K   PELVQVTS+NIKLI+ENLKIAQDRQKSY   RRRDLEFQIGE
Sbjct: 1303 DPRTPVCWNEVGERKLVDPELVQVTSDNIKLIKENLKIAQDRQKSYVDKRRRDLEFQIGE 1362

Query: 181  QVFLKLSPWRGVLRFERKDPLQVLQVQPIELKEDFSYREEASTGISSKPEGFLVFSDALS 224
            QVFLKLS WRGVLRFERK+                         ISSKP GF+VF D LS
Sbjct: 1363 QVFLKLSSWRGVLRFERKE-----------------------HRISSKPGGFMVFYDTLS 1412

[Close]

BLAST of Pay0007639 vs. ExPASy TrEMBL
Match: A0A5D3D150 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002770 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 3.0e-77
Identity = 166/253 (65.61%), Postives = 173/253 (68.38%), Query Frame = 0


Query: 1    MYRTLKKTYWWSGMKREIVEYVDRCLICQQVKP----------------WKWEHITMDFL 60
            MYRTLKKTYWW GMKR+I EYVDRCLICQQVKP                WKW+HITMDFL
Sbjct: 1183 MYRTLKKTYWWPGMKRQIAEYVDRCLICQQVKPMRQRPGGLLNLLPVPEWKWKHITMDFL 1242

Query: 61   FRLPCTSRRYDGIWVIVDRLTKTARFIPIKATPTLDQLAKLYVDRITMQD----SCVLER 120
            F LP TSR YDGIWVI DRLTKTARFIPIKA  TLDQLAKLYVDRI  Q     S V +R
Sbjct: 1243 FGLPRTSRGYDGIWVIADRLTKTARFIPIKAMSTLDQLAKLYVDRIVSQHGVPVSIVSDR 1302

Query: 121  SGRT----------KASGPELVQVTSENIKLIRENLKIAQDRQKSYAGNRRRDLEFQIGE 180
              RT          K   PELVQVTS+NIKLI+ENLKIAQDRQKSY   RRRDLEFQIGE
Sbjct: 1303 DPRTPVCWNEVGERKLVDPELVQVTSDNIKLIKENLKIAQDRQKSYVDKRRRDLEFQIGE 1362

Query: 181  QVFLKLSPWRGVLRFERKDPLQVLQVQPIELKEDFSYREEASTGISSKPEGFLVFSDALS 224
            QVFLKLS WRGVLRFERK+                         ISSKP GF+VF D LS
Sbjct: 1363 QVFLKLSSWRGVLRFERKE-----------------------HRISSKPGGFMVFYDTLS 1412

[Close]

BLAST of Pay0007639 vs. ExPASy TrEMBL
Match: A0A5A7UF07 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001710 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 3.7e-67
Identity = 162/327 (49.54%), Postives = 165/327 (50.46%), Query Frame = 0


Query: 1   MYRTLKKTYWWSGMKREIVEYVDRCLICQQVKP----------------WKWEHITMDFL 60
           MYRTLKKTYWW GMKREI EYVDRCLICQ VKP                WKWEHIT+DFL
Sbjct: 1   MYRTLKKTYWWPGMKREIAEYVDRCLICQLVKPVRQRLGGLLNPLPMPEWKWEHITIDFL 60

Query: 61  FRLPCTSRRYDGIWVIVDRLTKTARFIPIKATPTLDQLAKLYVDRI-------------- 120
           F LPCTSR YDGIWVIVDRLTK ARFIPIKAT TLDQLAKLYVDRI              
Sbjct: 61  FGLPCTSRGYDGIWVIVDRLTKIARFIPIKATSTLDQLAKLYVDRIVSQHGVPVSIVSDR 120

Query: 121 -----------------------------------------------------------T 180
                                                                      T
Sbjct: 121 DPRFTSKFWPSVQKAMGTKLKFSTAFHPQTDGQSERTIQTLEDMLRACVLQFKESFVWQT 180

Query: 181 MQDSCVLERSGRTKASGPELVQVTSENIKLIRENLKIAQDRQKSYAGNRRRDLEFQIGEQ 192
            QDS      G  K  GPEL+QVT +NIKLIRENLKIAQDRQKSYA  RRRDLEFQIGEQ
Sbjct: 181 TQDSVCWNEVGERKLVGPELLQVTLDNIKLIRENLKIAQDRQKSYADKRRRDLEFQIGEQ 240

[Close]

BLAST of Pay0007639 vs. NCBI nr
Match: TYK14495.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 377.5 bits (968), Expect = 8.1e-101
Identity = 201/243 (82.72%), Postives = 204/243 (83.95%), Query Frame = 0


Query: 1   MYRTLKKTYWWSGMKREIVEYVDRCLICQQVKPWKWEHITMDFLFRLPCTSRRYDGIWVI 60
           +YRTLKKTYWWSGMKREIVEYVDRCLICQQVKP            RLP TSRRYDGIWVI
Sbjct: 509 VYRTLKKTYWWSGMKREIVEYVDRCLICQQVKP-----------VRLPRTSRRYDGIWVI 568

Query: 61  VDRLTKTARFIPIKATPTLDQLAKLYVDRITMQDSCVLERSGRTKASGPELVQVTSENIK 120
           VDRLTKT +FIPIK T TLDQLAKLYVDRI   DSCVLERSGRTKASGPELVQVTSENIK
Sbjct: 569 VDRLTKTVQFIPIKPTSTLDQLAKLYVDRI---DSCVLERSGRTKASGPELVQVTSENIK 628

Query: 121 LIRENLKIAQDRQKSYAGNRRRDLEFQIGEQVFLKLSPWRGVLRFERKDPLQVLQVQPIE 180
           LIRENLKIAQDRQKSYAGNRRRDLEFQIGEQVFLKLSPWRGVLRFERKDPLQVLQVQPIE
Sbjct: 629 LIRENLKIAQDRQKSYAGNRRRDLEFQIGEQVFLKLSPWRGVLRFERKDPLQVLQVQPIE 688

Query: 181 LKEDFSYREEA--------------------STGISSKPEGFLVFSDALSILEVHKSNQK 224
           LKEDFSYREEA                    STGISSKP+GFLVFSDALSILEVHKSNQK
Sbjct: 689 LKEDFSYREEAVQILDRKEQVLRNKTIRLVKSTGISSKPKGFLVFSDALSILEVHKSNQK 737

[Close]

BLAST of Pay0007639 vs. NCBI nr
Match: XP_008459128.1 (PREDICTED: uncharacterized protein LOC103498328 [Cucumis melo])

HSP 1 Score: 363.6 bits (932), Expect = 1.2e-96
Identity = 190/248 (76.61%), Postives = 194/248 (78.23%), Query Frame = 0


Query: 1   MYRTLKKTYWWSGMKREIVEYVDRCLICQQVKP----------------WKWEHITMDFL 60
           MYRTLKKTYWW GMKREI EYVDRCLICQ VKP                WKWEHIT+DFL
Sbjct: 1   MYRTLKKTYWWPGMKREIAEYVDRCLICQLVKPVRQRLGGLLNPLPMPEWKWEHITIDFL 60

Query: 61  FRLPCTSRRYDGIWVIVDRLTKTARFIPIKATPTLDQLAKLYVDRITMQDSCVLERSGRT 120
           F LPCTSR YDGIWVIVDRLTK ARFIPIKAT TLDQLAKLYVDRIT QDS      G  
Sbjct: 61  FGLPCTSRGYDGIWVIVDRLTKIARFIPIKATSTLDQLAKLYVDRITTQDSVCWNEVGER 120

Query: 121 KASGPELVQVTSENIKLIRENLKIAQDRQKSYAGNRRRDLEFQIGEQVFLKLSPWRGVLR 180
           K  GPEL+QVT +NIKLIRENLKIAQDRQKSYA  RRRDLEFQIGEQVFLKLSPWRGVLR
Sbjct: 121 KLVGPELLQVTLDNIKLIRENLKIAQDRQKSYADKRRRDLEFQIGEQVFLKLSPWRGVLR 180

Query: 181 FERKDPLQVLQVQPIELKEDFSYREEA---------STGISSKPEGFLVFSDALSILEVH 224
           F RKDP  VLQVQP ELKED SYREEA         STG SSKP GFLVFS+ALSILEV 
Sbjct: 181 FGRKDPSHVLQVQPFELKEDLSYREEAVQILDRKEQSTGFSSKPGGFLVFSEALSILEVQ 240

[Close]

BLAST of Pay0007639 vs. NCBI nr
Match: KAA0042035.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 298.1 bits (762), Expect = 6.3e-77
Identity = 166/253 (65.61%), Postives = 173/253 (68.38%), Query Frame = 0


Query: 1    MYRTLKKTYWWSGMKREIVEYVDRCLICQQVKP----------------WKWEHITMDFL 60
            MYRTLKKTYWW GMKR+I EYVDRCLICQQVKP                WKW+HITMDFL
Sbjct: 1183 MYRTLKKTYWWPGMKRQIAEYVDRCLICQQVKPMRQRPGGLLNLLPVPEWKWKHITMDFL 1242

Query: 61   FRLPCTSRRYDGIWVIVDRLTKTARFIPIKATPTLDQLAKLYVDRITMQD----SCVLER 120
            F LP TSR YDGIWVI DRLTKTARFIPIKA  TLDQLAKLYVDRI  Q     S V +R
Sbjct: 1243 FGLPRTSRGYDGIWVIADRLTKTARFIPIKAMSTLDQLAKLYVDRIVSQHGVPVSIVSDR 1302

Query: 121  SGRT----------KASGPELVQVTSENIKLIRENLKIAQDRQKSYAGNRRRDLEFQIGE 180
              RT          K   PELVQVTS+NIKLI+ENLKIAQDRQKSY   RRRDLEFQIGE
Sbjct: 1303 DPRTPVCWNEVGERKLVDPELVQVTSDNIKLIKENLKIAQDRQKSYVDKRRRDLEFQIGE 1362

Query: 181  QVFLKLSPWRGVLRFERKDPLQVLQVQPIELKEDFSYREEASTGISSKPEGFLVFSDALS 224
            QVFLKLS WRGVLRFERK+                         ISSKP GF+VF D LS
Sbjct: 1363 QVFLKLSSWRGVLRFERKE-----------------------HRISSKPGGFMVFYDTLS 1412

[Close]

BLAST of Pay0007639 vs. NCBI nr
Match: TYK17971.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 298.1 bits (762), Expect = 6.3e-77
Identity = 166/253 (65.61%), Postives = 173/253 (68.38%), Query Frame = 0


Query: 1    MYRTLKKTYWWSGMKREIVEYVDRCLICQQVKP----------------WKWEHITMDFL 60
            MYRTLKKTYWW GMKR+I EYVDRCLICQQVKP                WKW+HITMDFL
Sbjct: 1183 MYRTLKKTYWWPGMKRQIAEYVDRCLICQQVKPMRQRPGGLLNLLPVPEWKWKHITMDFL 1242

Query: 61   FRLPCTSRRYDGIWVIVDRLTKTARFIPIKATPTLDQLAKLYVDRITMQD----SCVLER 120
            F LP TSR YDGIWVI DRLTKTARFIPIKA  TLDQLAKLYVDRI  Q     S V +R
Sbjct: 1243 FGLPRTSRGYDGIWVIADRLTKTARFIPIKAMSTLDQLAKLYVDRIVSQHGVPVSIVSDR 1302

Query: 121  SGRT----------KASGPELVQVTSENIKLIRENLKIAQDRQKSYAGNRRRDLEFQIGE 180
              RT          K   PELVQVTS+NIKLI+ENLKIAQDRQKSY   RRRDLEFQIGE
Sbjct: 1303 DPRTPVCWNEVGERKLVDPELVQVTSDNIKLIKENLKIAQDRQKSYVDKRRRDLEFQIGE 1362

Query: 181  QVFLKLSPWRGVLRFERKDPLQVLQVQPIELKEDFSYREEASTGISSKPEGFLVFSDALS 224
            QVFLKLS WRGVLRFERK+                         ISSKP GF+VF D LS
Sbjct: 1363 QVFLKLSSWRGVLRFERKE-----------------------HRISSKPGGFMVFYDTLS 1412

[Close]

BLAST of Pay0007639 vs. NCBI nr
Match: KAA0054352.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK12389.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 264.6 bits (675), Expect = 7.7e-67
Identity = 162/327 (49.54%), Postives = 165/327 (50.46%), Query Frame = 0


Query: 1   MYRTLKKTYWWSGMKREIVEYVDRCLICQQVKP----------------WKWEHITMDFL 60
           MYRTLKKTYWW GMKREI EYVDRCLICQ VKP                WKWEHIT+DFL
Sbjct: 1   MYRTLKKTYWWPGMKREIAEYVDRCLICQLVKPVRQRLGGLLNPLPMPEWKWEHITIDFL 60

Query: 61  FRLPCTSRRYDGIWVIVDRLTKTARFIPIKATPTLDQLAKLYVDRI-------------- 120
           F LPCTSR YDGIWVIVDRLTK ARFIPIKAT TLDQLAKLYVDRI              
Sbjct: 61  FGLPCTSRGYDGIWVIVDRLTKIARFIPIKATSTLDQLAKLYVDRIVSQHGVPVSIVSDR 120

Query: 121 -----------------------------------------------------------T 180
                                                                      T
Sbjct: 121 DPRFTSKFWPSVQKAMGTKLKFSTAFHPQTDGQSERTIQTLEDMLRACVLQFKESFVWQT 180

Query: 181 MQDSCVLERSGRTKASGPELVQVTSENIKLIRENLKIAQDRQKSYAGNRRRDLEFQIGEQ 192
            QDS      G  K  GPEL+QVT +NIKLIRENLKIAQDRQKSYA  RRRDLEFQIGEQ
Sbjct: 181 TQDSVCWNEVGERKLVGPELLQVTLDNIKLIRENLKIAQDRQKSYADKRRRDLEFQIGEQ 240

The following BLAST results are available for this feature:

BLAST of Pay0007639 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	4.9e-08	31.00	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	4.9e-08	31.00	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	4.9e-08	31.00	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	4.9e-08	31.00	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	4.9e-08	31.00	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Pay0007639 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CSJ5	3.9e-101	82.72	Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G...	[more]
A0A1S3CAP1	5.9e-97	76.61	uncharacterized protein LOC103498328 OS=Cucumis melo OX=3656 GN=LOC103498328 PE=...	[more]
A0A5A7TKT0	3.0e-77	65.61	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67...	[more]
A0A5D3D150	3.0e-77	65.61	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30...	[more]
A0A5A7UF07	3.7e-67	49.54	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30...	[more]

BLAST of Pay0007639 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK14495.1	8.1e-101	82.72	putative polyprotein [Cucumis melo var. makuwa]	[more]
XP_008459128.1	1.2e-96	76.61	PREDICTED: uncharacterized protein LOC103498328 [Cucumis melo]	[more]
KAA0042035.1	6.3e-77	65.61	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
TYK17971.1	6.3e-77	65.61	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0054352.1	7.7e-67	49.54	reverse transcriptase [Cucumis melo var. makuwa] >TYK12389.1 reverse transcripta...	[more]

BLAST of Pay0007639 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 1..32 e-value: 1.7E-7 score: 33.3
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 3..93
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 1..33 e-value: 1.1E-9 score: 38.2
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 33..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0007639.1	Pay0007639.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0005488	binding
molecular_function	GO:0016740	transferase activity