Pay0007294 (gene) Melon (Payzawat) v1

Overview


Name	Pay0007294
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr02: 14398060 .. 14398821 (+)
RNA-Seq Expression	Pay0007294
Synteny	Pay0007294

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGGACTCGATCCAAAGGTGGTCGTTCATCGCTTAGCGATCAAACCAGAGCATCGGCCAGTCAAGCAAGCCCAACGACAATTTCGACCAGAACTCATTTCTAAAATCGAGGAAGAGGTAAATAAGCTCATTGAGGCTGAATTTATTCGTGAAGTCAAGTACTCAACATGGATAGCTAATATTTTTCCAGTAAGGAAGAAGAATGGCCAACTACGTATTTGTGTCGATTTTCGCGACCTAAATAACGCATGCCCAAAAGATGACTTTCGTTTGCCTATCATGGAAATCATGATAGACGAAACTGCAGGGAATGAAGCTTTATCTTTCATGGATGGGTCGTCAGAATATAACCAGATTAGAATGGCTCTACATGACAAGGAGAAAATAGCATTTCGAACTCCAAAAGGTATATACTGTTATAAGGTAATGCCTTTCAGATTGAAAAATGCAGGTGCTACATACCAACGCACTATGCAAAGGATCTTTGATGATATGCTGCATAAACACGTTGAATGTTATGTTGACGATCTCGTAGTCAAGTCCAAGAAGAAATGCGATCACTTGAAAGACCTGAAGCTTTTACTTGATCGCCTCAGGAAATATCAACTAAGAATGAACCCTCTCAAGTGTGCATTCGGTGTAACTTCAAGGAAATTTTTAGGATTTATAGTGAGACATCGTGGCATCGAAGTTGATCACTCAAAAATTGATGCCATCCAGAAGATGCCAAGTCCGAAGAACCTGCACGAATTGAGATGA

mRNA sequence

ATGCCTGGACTCGATCCAAAGGTGGTCGTTCATCGCTTAGCGATCAAACCAGAGCATCGGCCAGTCAAGCAAGCCCAACGACAATTTCGACCAGAACTCATTTCTAAAATCGAGGAAGAGGTAAATAAGCTCATTGAGGCTGAATTTATTCAATATAACCAGATTAGAATGGCTCTACATGACAAGGAGAAAATAGCATTTCGAACTCCAAAAGGTATATACTGTTATAAGGTAATGCCTTTCAGATTGAAAAATGCAGGTGCTACATACCAACGCACTATGCAAAGGATCTTTGATGATATGCTGCATAAACACGTTGAATGTTATGTTGACGATCTCGTAGTCAAGTCCAAGAAGAAATGCGATCACTTGAAAGACCTGAAGCTTTTACTTGATCGCCTCAGGAAATATCAACTAAGAATGAACCCTCTCAAGTGTGCATTCGGTGTAACTTCAAGGAAATTTTTAGGATTTATAGTGAGACATCGTGGCATCGAAGTTGATCACTCAAAAATTGATGCCATCCAGAAGATGCCAAGTCCGAAGAACCTGCACGAATTGAGATGA

Coding sequence (CDS)

ATGCCTGGACTCGATCCAAAGGTGGTCGTTCATCGCTTAGCGATCAAACCAGAGCATCGGCCAGTCAAGCAAGCCCAACGACAATTTCGACCAGAACTCATTTCTAAAATCGAGGAAGAGGTAAATAAGCTCATTGAGGCTGAATTTATTCAATATAACCAGATTAGAATGGCTCTACATGACAAGGAGAAAATAGCATTTCGAACTCCAAAAGGTATATACTGTTATAAGGTAATGCCTTTCAGATTGAAAAATGCAGGTGCTACATACCAACGCACTATGCAAAGGATCTTTGATGATATGCTGCATAAACACGTTGAATGTTATGTTGACGATCTCGTAGTCAAGTCCAAGAAGAAATGCGATCACTTGAAAGACCTGAAGCTTTTACTTGATCGCCTCAGGAAATATCAACTAAGAATGAACCCTCTCAAGTGTGCATTCGGTGTAACTTCAAGGAAATTTTTAGGATTTATAGTGAGACATCGTGGCATCGAAGTTGATCACTCAAAAATTGATGCCATCCAGAAGATGCCAAGTCCGAAGAACCTGCACGAATTGAGATGA

Protein sequence

MPGLDPKVVVHRLAIKPEHRPVKQAQRQFRPELISKIEEEVNKLIEAEFIQYNQIRMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVDDLVVKSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAIQKMPSPKNLHELR

Homology

[Close]

BLAST of Pay0007294 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-20
Identity = 48/137 (35.04%), Postives = 79/137 (57.66%), Query Frame = 0


Query: 52  YNQIRMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVD 111
           Y+ IR+   D+ K+AFR P+G++ Y VMP+ +  A A +Q  +  I  +    HV CY+D
Sbjct: 507 YHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMD 566

Query: 112 DLVVKSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSK 171
           D+++ SK + +H+K +K +L +L+   L +N  KC F  +  KF+G+ +  +G       
Sbjct: 567 DILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQEN 626

Query: 172 IDAIQKMPSPKNLHELR 189
           ID + +   PKN  ELR
Sbjct: 627 IDKVLQWKQPKNRKELR 643

[Close]

BLAST of Pay0007294 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-20
Identity = 48/137 (35.04%), Postives = 79/137 (57.66%), Query Frame = 0


Query: 52  YNQIRMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVD 111
           Y+ IR+   D+ K+AFR P+G++ Y VMP+ +  A A +Q  +  I  +    HV CY+D
Sbjct: 507 YHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMD 566

Query: 112 DLVVKSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSK 171
           D+++ SK + +H+K +K +L +L+   L +N  KC F  +  KF+G+ +  +G       
Sbjct: 567 DILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQEN 626

Query: 172 IDAIQKMPSPKNLHELR 189
           ID + +   PKN  ELR
Sbjct: 627 IDKVLQWKQPKNRKELR 643

[Close]

BLAST of Pay0007294 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-20
Identity = 48/137 (35.04%), Postives = 79/137 (57.66%), Query Frame = 0


Query: 52  YNQIRMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVD 111
           Y+ IR+   D+ K+AFR P+G++ Y VMP+ +  A A +Q  +  I  +    HV CY+D
Sbjct: 507 YHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMD 566

Query: 112 DLVVKSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSK 171
           D+++ SK + +H+K +K +L +L+   L +N  KC F  +  KF+G+ +  +G       
Sbjct: 567 DILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQEN 626

Query: 172 IDAIQKMPSPKNLHELR 189
           ID + +   PKN  ELR
Sbjct: 627 IDKVLQWKQPKNRKELR 643

[Close]

BLAST of Pay0007294 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-20
Identity = 48/137 (35.04%), Postives = 79/137 (57.66%), Query Frame = 0


Query: 52  YNQIRMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVD 111
           Y+ IR+   D+ K+AFR P+G++ Y VMP+ +  A A +Q  +  I  +    HV CY+D
Sbjct: 507 YHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMD 566

Query: 112 DLVVKSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSK 171
           D+++ SK + +H+K +K +L +L+   L +N  KC F  +  KF+G+ +  +G       
Sbjct: 567 DILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQEN 626

Query: 172 IDAIQKMPSPKNLHELR 189
           ID + +   PKN  ELR
Sbjct: 627 IDKVLQWKQPKNRKELR 643

[Close]

BLAST of Pay0007294 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-20
Identity = 48/137 (35.04%), Postives = 79/137 (57.66%), Query Frame = 0


Query: 52  YNQIRMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVD 111
           Y+ IR+   D+ K+AFR P+G++ Y VMP+ +  A A +Q  +  I  +    HV CY+D
Sbjct: 507 YHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMD 566

Query: 112 DLVVKSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSK 171
           D+++ SK + +H+K +K +L +L+   L +N  KC F  +  KF+G+ +  +G       
Sbjct: 567 DILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQEN 626

Query: 172 IDAIQKMPSPKNLHELR 189
           ID + +   PKN  ELR
Sbjct: 627 IDKVLQWKQPKNRKELR 643

[Close]

BLAST of Pay0007294 vs. ExPASy TrEMBL
Match: A0A5A7U9E3 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001360 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.5e-93
Identity = 187/253 (73.91%), Postives = 188/253 (74.31%), Query Frame = 0


Query: 1   MPGLDPKVVVHRLAIKPEHRPVKQAQRQFRPELISKIEEEVNKLIEAEFI---------- 60
           MPGLDPKVVVHRLAIKPEHRPVKQAQRQFRPELISKIEEEVNKLIEAEFI          
Sbjct: 362 MPGLDPKVVVHRLAIKPEHRPVKQAQRQFRPELISKIEEEVNKLIEAEFIREVKYSTWIA 421

Query: 61  -------------------------------------------------------QYNQI 120
                                                                  +YNQI
Sbjct: 422 NIFPVRKKNGQLRICVDFRDLNNACPKDDFRLPIMEIMIDETAGNEALSFMDGSSEYNQI 481

Query: 121 RMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVDDLVV 180
           RMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVDDLVV
Sbjct: 482 RMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVDDLVV 541

Query: 181 KSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAI 189
           KSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAI
Sbjct: 542 KSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAI 601

[Close]

BLAST of Pay0007294 vs. ExPASy TrEMBL
Match: A0A5D3C381 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00650 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 7.6e-90
Identity = 183/253 (72.33%), Postives = 185/253 (73.12%), Query Frame = 0


Query: 1   MPGLDPKVVVHRLAIKPEHRPVKQAQRQFRPELISKIEEEVNKLIEAEFIQ--------- 60
           MPGLDPKVVVHRLAIKPEHRPVKQAQRQFR ELIS+IEEEVNKLIEAEFI+         
Sbjct: 362 MPGLDPKVVVHRLAIKPEHRPVKQAQRQFRLELISQIEEEVNKLIEAEFIREVKYSTRIA 421

Query: 61  --------------------------------------------------------YNQI 120
                                                                   YNQI
Sbjct: 422 NIVPVRKKNGQLRICVDFRDLNNACPKDDFPLPIMEIMIDETAGNEALSFMDGSSGYNQI 481

Query: 121 RMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVDDLVV 180
           RMALHDKEKIAFRTPKGIYCYKVMPF LKNAGATYQ TMQRIFDDMLHKHVECYVDDLVV
Sbjct: 482 RMALHDKEKIAFRTPKGIYCYKVMPFGLKNAGATYQCTMQRIFDDMLHKHVECYVDDLVV 541

Query: 181 KSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAI 189
           KSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAI
Sbjct: 542 KSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAI 601

[Close]

BLAST of Pay0007294 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.8e-86
Identity = 176/253 (69.57%), Postives = 181/253 (71.54%), Query Frame = 0


Query: 1    MPGLDPKVVVHRLAIKPEHRPVKQAQRQFRPELISKIEEEVNKLIEAEFIQ--------- 60
            MPGLDPKV VHRLAIKPEHRPVKQAQR+FRPELIS+IEEEVNKLIEA FI+         
Sbjct: 1343 MPGLDPKVAVHRLAIKPEHRPVKQAQRRFRPELISQIEEEVNKLIEAGFIREVKYPTWIA 1402

Query: 61   --------------------------------------------------------YNQI 120
                                                                    YNQI
Sbjct: 1403 NIVPVRKKNGQLRVCVDFRDLNNACPKDDFPLPIMEIMIDATAGHEALSFMDGSSGYNQI 1462

Query: 121  RMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVDDLVV 180
            RMAL D+EK AFRTPKGIYCYKVMPF LKNAGATYQR MQRIFDDMLHKHVECYVDDLVV
Sbjct: 1463 RMALEDEEKTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQRIFDDMLHKHVECYVDDLVV 1522

Query: 181  KSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAI 189
            KSKKKCDHLKDLKL+LDRLRKYQLRMNPLKCAFGVTS KFLGFIVRHRGIEVDHSKIDAI
Sbjct: 1523 KSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTSGKFLGFIVRHRGIEVDHSKIDAI 1582

[Close]

BLAST of Pay0007294 vs. ExPASy TrEMBL
Match: A0A5D3CXS1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00440 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.8e-86
Identity = 176/253 (69.57%), Postives = 181/253 (71.54%), Query Frame = 0


Query: 1   MPGLDPKVVVHRLAIKPEHRPVKQAQRQFRPELISKIEEEVNKLIEAEFIQ--------- 60
           MPGLDPKV VHRLAIKPEHRPVKQAQR+FRPELIS+IEEEVNKLIEA FI+         
Sbjct: 526 MPGLDPKVAVHRLAIKPEHRPVKQAQRRFRPELISQIEEEVNKLIEAGFIREVKYPTWIA 585

Query: 61  --------------------------------------------------------YNQI 120
                                                                   YNQI
Sbjct: 586 NIVPVRKKNGQLRVCVDFRDLNNACPKDDFPLPIMEIMIDATAGHEALSFMDGSSGYNQI 645

Query: 121 RMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVDDLVV 180
           RMAL D+EK AFRTPKGIYCYKVMPF LKNAGATYQR MQRIFDDMLHKHVECYVDDLVV
Sbjct: 646 RMALEDEEKTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQRIFDDMLHKHVECYVDDLVV 705

Query: 181 KSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAI 189
           KSKKKCDHLKDLKL+LDRLRKYQLRMNPLKCAFGVTS KFLGFIVRHRGIEVDHSKIDAI
Sbjct: 706 KSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTSGKFLGFIVRHRGIEVDHSKIDAI 765

[Close]

BLAST of Pay0007294 vs. ExPASy TrEMBL
Match: A0A5D3D1E5 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G004020 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.8e-86
Identity = 176/253 (69.57%), Postives = 181/253 (71.54%), Query Frame = 0


Query: 1    MPGLDPKVVVHRLAIKPEHRPVKQAQRQFRPELISKIEEEVNKLIEAEFIQ--------- 60
            MPGLDPKV VHRLAIKPEHRPVKQAQR+FRPELIS+IEEEVNKLIEA FI+         
Sbjct: 1273 MPGLDPKVAVHRLAIKPEHRPVKQAQRRFRPELISQIEEEVNKLIEAGFIREVKYPTWIA 1332

Query: 61   --------------------------------------------------------YNQI 120
                                                                    YNQI
Sbjct: 1333 NIVPVRKKNGQLRVCVDFRDLNNACPKDDFPLPIMEIMIDATAGHEALSFMDGSSGYNQI 1392

Query: 121  RMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVDDLVV 180
            RMAL D+EK AFRTPKGIYCYKVMPF LKNAGATYQR MQRIFDDMLHKHVECYVDDLVV
Sbjct: 1393 RMALEDEEKTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQRIFDDMLHKHVECYVDDLVV 1452

Query: 181  KSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAI 189
            KSKKKCDHLKDLKL+LDRLRKYQLRMNPLKCAFGVTS KFLGFIVRHRGIEVDHSKIDAI
Sbjct: 1453 KSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTSGKFLGFIVRHRGIEVDHSKIDAI 1512

[Close]

BLAST of Pay0007294 vs. NCBI nr
Match: KAA0050119.1 (uncharacterized protein E6C27_scaffold675G001360 [Cucumis melo var. makuwa])

HSP 1 Score: 351.3 bits (900), Expect = 5.2e-93
Identity = 187/253 (73.91%), Postives = 188/253 (74.31%), Query Frame = 0


Query: 1   MPGLDPKVVVHRLAIKPEHRPVKQAQRQFRPELISKIEEEVNKLIEAEFI---------- 60
           MPGLDPKVVVHRLAIKPEHRPVKQAQRQFRPELISKIEEEVNKLIEAEFI          
Sbjct: 362 MPGLDPKVVVHRLAIKPEHRPVKQAQRQFRPELISKIEEEVNKLIEAEFIREVKYSTWIA 421

Query: 61  -------------------------------------------------------QYNQI 120
                                                                  +YNQI
Sbjct: 422 NIFPVRKKNGQLRICVDFRDLNNACPKDDFRLPIMEIMIDETAGNEALSFMDGSSEYNQI 481

Query: 121 RMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVDDLVV 180
           RMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVDDLVV
Sbjct: 482 RMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVDDLVV 541

Query: 181 KSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAI 189
           KSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAI
Sbjct: 542 KSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAI 601

[Close]

BLAST of Pay0007294 vs. NCBI nr
Match: TYK06373.1 (uncharacterized protein E5676_scaffold163G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 339.7 bits (870), Expect = 1.6e-89
Identity = 183/253 (72.33%), Postives = 185/253 (73.12%), Query Frame = 0


Query: 1   MPGLDPKVVVHRLAIKPEHRPVKQAQRQFRPELISKIEEEVNKLIEAEFIQ--------- 60
           MPGLDPKVVVHRLAIKPEHRPVKQAQRQFR ELIS+IEEEVNKLIEAEFI+         
Sbjct: 362 MPGLDPKVVVHRLAIKPEHRPVKQAQRQFRLELISQIEEEVNKLIEAEFIREVKYSTRIA 421

Query: 61  --------------------------------------------------------YNQI 120
                                                                   YNQI
Sbjct: 422 NIVPVRKKNGQLRICVDFRDLNNACPKDDFPLPIMEIMIDETAGNEALSFMDGSSGYNQI 481

Query: 121 RMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVDDLVV 180
           RMALHDKEKIAFRTPKGIYCYKVMPF LKNAGATYQ TMQRIFDDMLHKHVECYVDDLVV
Sbjct: 482 RMALHDKEKIAFRTPKGIYCYKVMPFGLKNAGATYQCTMQRIFDDMLHKHVECYVDDLVV 541

Query: 181 KSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAI 189
           KSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAI
Sbjct: 542 KSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAI 601

[Close]

BLAST of Pay0007294 vs. NCBI nr
Match: KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 328.6 bits (841), Expect = 3.6e-86
Identity = 176/253 (69.57%), Postives = 181/253 (71.54%), Query Frame = 0


Query: 1    MPGLDPKVVVHRLAIKPEHRPVKQAQRQFRPELISKIEEEVNKLIEAEFIQ--------- 60
            MPGLDPKV VHRLAIKPEHRPVKQAQR+FRPELIS+IEEEVNKLIEA FI+         
Sbjct: 1343 MPGLDPKVAVHRLAIKPEHRPVKQAQRRFRPELISQIEEEVNKLIEAGFIREVKYPTWIA 1402

Query: 61   --------------------------------------------------------YNQI 120
                                                                    YNQI
Sbjct: 1403 NIVPVRKKNGQLRVCVDFRDLNNACPKDDFPLPIMEIMIDATAGHEALSFMDGSSGYNQI 1462

Query: 121  RMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVDDLVV 180
            RMAL D+EK AFRTPKGIYCYKVMPF LKNAGATYQR MQRIFDDMLHKHVECYVDDLVV
Sbjct: 1463 RMALEDEEKTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQRIFDDMLHKHVECYVDDLVV 1522

Query: 181  KSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAI 189
            KSKKKCDHLKDLKL+LDRLRKYQLRMNPLKCAFGVTS KFLGFIVRHRGIEVDHSKIDAI
Sbjct: 1523 KSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTSGKFLGFIVRHRGIEVDHSKIDAI 1582

[Close]

BLAST of Pay0007294 vs. NCBI nr
Match: TYK16275.1 (uncharacterized protein E5676_scaffold21G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 328.6 bits (841), Expect = 3.6e-86
Identity = 176/253 (69.57%), Postives = 181/253 (71.54%), Query Frame = 0


Query: 1   MPGLDPKVVVHRLAIKPEHRPVKQAQRQFRPELISKIEEEVNKLIEAEFIQ--------- 60
           MPGLDPKV VHRLAIKPEHRPVKQAQR+FRPELIS+IEEEVNKLIEA FI+         
Sbjct: 526 MPGLDPKVAVHRLAIKPEHRPVKQAQRRFRPELISQIEEEVNKLIEAGFIREVKYPTWIA 585

Query: 61  --------------------------------------------------------YNQI 120
                                                                   YNQI
Sbjct: 586 NIVPVRKKNGQLRVCVDFRDLNNACPKDDFPLPIMEIMIDATAGHEALSFMDGSSGYNQI 645

Query: 121 RMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVDDLVV 180
           RMAL D+EK AFRTPKGIYCYKVMPF LKNAGATYQR MQRIFDDMLHKHVECYVDDLVV
Sbjct: 646 RMALEDEEKTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQRIFDDMLHKHVECYVDDLVV 705

Query: 181 KSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAI 189
           KSKKKCDHLKDLKL+LDRLRKYQLRMNPLKCAFGVTS KFLGFIVRHRGIEVDHSKIDAI
Sbjct: 706 KSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTSGKFLGFIVRHRGIEVDHSKIDAI 765

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BLAST of Pay0007294 vs. NCBI nr
Match: TYK18071.1 (uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa])

HSP 1 Score: 328.6 bits (841), Expect = 3.6e-86
Identity = 176/253 (69.57%), Postives = 181/253 (71.54%), Query Frame = 0


Query: 1    MPGLDPKVVVHRLAIKPEHRPVKQAQRQFRPELISKIEEEVNKLIEAEFIQ--------- 60
            MPGLDPKV VHRLAIKPEHRPVKQAQR+FRPELIS+IEEEVNKLIEA FI+         
Sbjct: 1273 MPGLDPKVAVHRLAIKPEHRPVKQAQRRFRPELISQIEEEVNKLIEAGFIREVKYPTWIA 1332

Query: 61   --------------------------------------------------------YNQI 120
                                                                    YNQI
Sbjct: 1333 NIVPVRKKNGQLRVCVDFRDLNNACPKDDFPLPIMEIMIDATAGHEALSFMDGSSGYNQI 1392

Query: 121  RMALHDKEKIAFRTPKGIYCYKVMPFRLKNAGATYQRTMQRIFDDMLHKHVECYVDDLVV 180
            RMAL D+EK AFRTPKGIYCYKVMPF LKNAGATYQR MQRIFDDMLHKHVECYVDDLVV
Sbjct: 1393 RMALEDEEKTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQRIFDDMLHKHVECYVDDLVV 1452

Query: 181  KSKKKCDHLKDLKLLLDRLRKYQLRMNPLKCAFGVTSRKFLGFIVRHRGIEVDHSKIDAI 189
            KSKKKCDHLKDLKL+LDRLRKYQLRMNPLKCAFGVTS KFLGFIVRHRGIEVDHSKIDAI
Sbjct: 1453 KSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTSGKFLGFIVRHRGIEVDHSKIDAI 1512

The following BLAST results are available for this feature:

BLAST of Pay0007294 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	1.2e-20	35.04	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.2e-20	35.04	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.2e-20	35.04	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.2e-20	35.04	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	1.2e-20	35.04	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Pay0007294 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U9E3	2.5e-93	73.91	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3C381	7.6e-90	72.33	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7TZU9	1.8e-86	69.57	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]
A0A5D3CXS1	1.8e-86	69.57	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3D1E5	1.8e-86	69.57	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00402...	[more]

BLAST of Pay0007294 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050119.1	5.2e-93	73.91	uncharacterized protein E6C27_scaffold675G001360 [Cucumis melo var. makuwa]	[more]
TYK06373.1	1.6e-89	72.33	uncharacterized protein E5676_scaffold163G00650 [Cucumis melo var. makuwa]	[more]
KAA0047477.1	3.6e-86	69.57	uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]	[more]
TYK16275.1	3.6e-86	69.57	uncharacterized protein E5676_scaffold21G00440 [Cucumis melo var. makuwa]	[more]
TYK18071.1	3.6e-86	69.57	uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]	[more]

BLAST of Pay0007294 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 52..160 e-value: 5.3E-18 score: 65.3
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 86..160 e-value: 1.1E-32 score: 115.1
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 3..52 e-value: 2.7E-5 score: 26.2 coord: 53..85 e-value: 1.1E-32 score: 115.1
None	No IPR available	PANTHER	PTHR24559:SF341	RNA-DIRECTED DNA POLYMERASE HOMOLOG	coord: 49..186
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 49..186
None	No IPR available	PANTHER	PTHR24559:SF341	RNA-DIRECTED DNA POLYMERASE HOMOLOG	coord: 1..50
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 1..50
None	No IPR available	CDD	cd01647	RT_LTR	coord: 37..160 e-value: 1.64118E-40 score: 133.49
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 8..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0007294.1	Pay0007294.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0140640	catalytic activity, acting on a nucleic acid
molecular_function	GO:0003676	nucleic acid binding