Pay0007178 (gene) Melon (Payzawat) v1

Overview
NamePay0007178
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionUnknown protein
Locationchr05: 6298367 .. 6302860 (+)
RNA-Seq ExpressionPay0007178
SyntenyPay0007178
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTTGCCGCCGTCCGTTTCCATTCCGATAAGGAAAACCTCCCCCCGTTTACCCATAAGTTACACCCTTCAATTCCAAAGAAACCCATCATACGAAGGAGATTAAATCGGAAGCCGCTTCAAGATATAACCAATTCATTTGAAAATACTATTCGATTCGGTTCGATTCAAGATGGATTTATCGCCTCGGTTGAATCGGTTTGTTTGCAGTCAAATTCCAGGAAGAGGAAAGCTGTGGATGAAGTTTTTTCTGGAACTGCCAAATCGCTCAGAATGGGATTCAGATAACCGTTCTTAATTTCCATTTCTTTTATAGAAATTAGATTGTAGATTTACAGCAATTGATCTTATTTTAACATCTTTTGGGTTCTTGGAAATAGAGCAATTCTTGATACATGATTCTGGGTCATTGCTAGATTTAAGTTGTTGGGCAATGAGTAATGGTTTCTGTGGTTAAATCTCTAAACCAAAACAGAGTTTATATAAGACTGTGATTCTTTCTTGACATGAGAGTTTGAAATTTTGGGCCTGTCTTATTAGTAGATTGAAACTCATTTAATGTGGAGAATGCAACCAATATCATATCTTACTTAGGTAAGGAGAAAGATTATGGATACATAATTAAATCACTAACATTTATATATTGGTACTAAGCTTTTCTATAGTCAAAATTGAAACTTTGAGAATGAAGGATTAAAGTGGATAATGTACAAGAACATAGAATTAACTATGTTACGGTTGCTTCTTGCTAACATCGGTGATTTATTAATGACCAATACATTATTATGATTTTAACTCTAGAGTTAAAGACAATTTCATTATATGAACTCTTTAATATTAGGTATGACTCGATTTTTCCTTTCTAATAATGAAGCTACTCTCAATTTTTTGTTTGTAACATTAGTAACAAACTATTTAACGAATAGTGTAAAAATCTTAGTGTTAATTCTATGTTACTTTATGATTATTTTTGTTTATTTTCATGGTCAAATTTCTTAACATTAGTGTTTAAGTTTAAAATGGCATTTGGACATTGGGGGTGCTTAAATATATATTGGTAGCATGCTAAACTCAACCAACTAGTGAACTTGATTAGAACAATTTGGATTGATTTAGGTTTGATTGAATCTACTTGGGTTAATCAATAGGCTTAAATCAACCTTCTTTCACTTCTATTTTAATTCAAATTATTTGTGGTCCAAATCAAAATGGTATGAATTAGGCTCGTTTGAAATGTTTGAGTTGTTAAACTTTCTATCAATACTCTTGATTAATCATGCATTTTGGAAACTAGTAACAATGGTTGACACGATGAAGTTGTACTAATTTGACTAACTTTTATGATTTGGTTTGGATTTGAATTTCTTATTTAAAAGAGTGCTTTTGACTATAAAATTTACAAATTTAAGTATTGAGTTAGGTACAAAGTTAAATTTTATAAAGTTTTAACCAAACTATCTCATGAATGCTTCTATAATTCTTCTTAGCTCTACACAACTTTAAACATGTTATGTCATATTTTAGCTTGATCATGTTCTTCGAGTGAAATCATGTTGATGATTTTGGGAATAGAATTCATTGATTTTTTCAATCTATTACATGATTTGGATGATTTACATTATTGTGGAAATGATTGGGTATGTTTGGGGTGGGGTTTTAGGAAGAAAAGGATTAGGAAATTGGGCCAAACCGTGTTTGGCCCAAGGATTATGATAAAGGGGGATTAGGGTTATCCTAATCCCTAAATAACCCTATCATATCCTATTTTTACTTTTTTACAACTCTACATTACCCTACCCAAACAATCCAATCAAAAATTTATTATTGTTTTTTAAATTACTACAATCATAACTCTTCTCCCAAACACATATTACCATAACACTATTATCATAATCCCTCCTCCAAACACATACCATCATAACACTATCTTTCTTATTTTCTCTCCCAAACACATATTACCACAACACTACCATTAATAATCTATTTCTCAAACACATATTATCATAATACTAGGATTATCATAATCCTAGGATTATTATAATTCTTTTCCTCCATAACTCTTTCCTTCCCCCAAACACACCCTAAATGATTTATAGAAATTAATTTGTTACTTTAGAGATTGATTTTGTTATAAATTTGAAGGAACGTGAACTAGATTCATCAAAGTTCACAGATCAAAAGATTGTGTTCTAATCTAATTATTGAAGGACACAATCTTCTTCCTTTGGCAAATAATTGGGCTCACTTAATTTTTTTTTCTTCACTTTGCAACACACGTATGTATATGTATAATTCTGCCACCCTATCAACCTATAAGCCCATTGAAGAAGAAGAATTTCCTGCCTTCATTCCTTATTTATTACGCATCACCTCTTAATTTACCAATCAAGAGACAATTTTTCCACCTCCATAATTTACCAATCAAAGAAAGGCTTATGGGTTTAAGAAATAAAGAATGAAGCTTTGGAGTTTTGGGCTCCATATCCTAACATTTCCTAGCTCTCAAAATCGTTTTCCCAATCCTACATTTCACCCTCAAAATGGCTCCTCCTGCTCAACCTTTCTTCTAATAACCAACCATATCCTCCGCACCAACCCCCAACCTATCCTTGTTTTCTTCCTAGACCTGCGCATGCTGACTTCCCTCCTATCTTTCAAACCCTTCTTCAGTCACTCAACATCAAGCTGACTGATTCTGATTATCTTCTCTAGAAGACTCAACTGTTTAATGTTGCAATCGTCAATGGGCTTAAAGGTTCTTTGAATGGTTAAGTTCTTTGTCCTCAGTTTCTTGATGTGAATCAGACTCAAGTCGGTGCTGATTACCCTTACGGGAAACGATTAAGTAGGATATTAATGCGCTGGATTTACTCATATTTATTTGAAGAAAAAATGGGTGAAATTGTCTCTACAAATTGCTCATAAAATCTGGGAGCCCCTTAGTCGTATGTATAGCTCCAAAACTACTGCTGGGATTAGGTGTTTTAAAGCTAAATTGTTTGAGATAAGAAAAGATAACCAACCTTTTTAACAGTATTTGTCTCAGATTATGGAAATACATTTCCAATTTCCAATAGAGATTATTGACATAATTAGAGTATTTTTAGGAAATATTATTCTTAGGAAATATTATATTATTCTTGTATATTCTTTCCTTTAGTGTGTTTTAATATGATTATATATAGGGTTGTAATCTGTCATTATTATCAATGAATCATCAATGAAATACTGATATTCCATACAATCTAACATGGTATCAGAGCTTTAGGTTTTAGTCGATCTCTATTTTCGTGTTCGATCTCTACCTCCGTCTATCGTCAATGACTAGCCATAGACGGAGGTAGACCCAGCAGCCCCAAATGTAAATCTCCCACTTTCACCCTTTGTTTTTACTTTAAAAAAAAAAAAAAAATCCGCCCCCACAATTCCCTAAAAATCCATCCGCCGCTAGTCGCTTGCGACCCACGTCCGTCGCCACCCCCAACTTCAGCCGCCGCTGCCGCTGCCTTCAGATATGCCATTCCTCGCCCATTCCTCGCCCGTTCCTTTGCAACCCACGTCAGCTGCACGAAGCTCCGCCGTCGCCGCCCTTCAAATCCGCTCCGCCCCACCTCCGTTCAGATTTCCGATCCAAGCCGTCAACTCCAAGTCATCGTGGAACAGCCGGAATATCCTCACCACCCTCTTTCCTCTTTAGGATCAAATCCCATTACTTGTTTATGCTTCATGTTTGCATTTAGGGTTTGGCTACTCTCCACTGACGTTCCCCCCTCAACATTATAACACTCCGTCTCTATCTCGATCCTTTTCTTCGCTATCTCGATCTATATATATATATATATATATATATATATTTATTTATTTATTTATTTATTCTGTTTTCAAATCAGTAATTATTTCTCCGACCCAGAAGTTCGGTATGTTCTTCGTAGGTTCTGTTATAGATTGAGGATCTATGTCTCCATCCCATAAGTTCTTCTTTTTGTTCTTCGTGGGATCTATCTCCATCCCAGAAGTTCTTCGTTTTGTTCTTTGTAGGATCTGTCTCCAACCTAGAAGTTCCTTGTGTTTTTCTTCTTCGTGGGTTCTTGATATCCTAGATTTATTGATTTGTTTAGTAAGTTTTTCTAACAAACTCAAGTTTGTGATAACCTTGAGTTTGAGGGAGGACATTGACATAATTAGAGTATTTTTAGGAAATATTATTCTTAGGAAATATTATATTATTCTTGTATATTCTTTCCTTTAGTGTGTTTTAATATGGTTATATATAGGGTTGTAATCTGTCATTATTATCAATGAATCATCAATGAATCATCAATGAAATACTGATATTCCATACAATCTAACAGAGATCATTTGGGTCTCATTTTGGAAGGTCTAGGTGTTGAGTACAATTCTTTTGTCACCTCCATACAGAACCGTGTTGATATTCCTTCCCTTAAGGATGTACGCAGTCTTCTTTTAGCCTTCGAGGCACAGCTGGAATAA

mRNA sequence

ATGGAGTTTGCCGCCGTCCGTTTCCATTCCGATAAGGAAAACCTCCCCCCGTTTACCCATAAGTTACACCCTTCAATTCCAAAGAAACCCATCATACGAAGGAGATTAAATCGGAAGCCGCTTCAAGATATAACCAATTCATTTGAAAATACTATTCGATTCGGTTCGATTCAAGATGGATTTATCGCCTCGGTTGAATCGTTTCTTGATGTGAATCAGACTCAAGTCGGTGCTGATTACCCTTACGGGAAACGATTAAGTCTAGGTGTTGAGTACAATTCTTTTGTCACCTCCATACAGAACCGTGTTGATATTCCTTCCCTTAAGGATGTACGCAGTCTTCTTTTAGCCTTCGAGGCACAGCTGGAATAA

Coding sequence (CDS)

ATGGAGTTTGCCGCCGTCCGTTTCCATTCCGATAAGGAAAACCTCCCCCCGTTTACCCATAAGTTACACCCTTCAATTCCAAAGAAACCCATCATACGAAGGAGATTAAATCGGAAGCCGCTTCAAGATATAACCAATTCATTTGAAAATACTATTCGATTCGGTTCGATTCAAGATGGATTTATCGCCTCGGTTGAATCGTTTCTTGATGTGAATCAGACTCAAGTCGGTGCTGATTACCCTTACGGGAAACGATTAAGTCTAGGTGTTGAGTACAATTCTTTTGTCACCTCCATACAGAACCGTGTTGATATTCCTTCCCTTAAGGATGTACGCAGTCTTCTTTTAGCCTTCGAGGCACAGCTGGAATAA

Protein sequence

MEFAAVRFHSDKENLPPFTHKLHPSIPKKPIIRRRLNRKPLQDITNSFENTIRFGSIQDGFIASVESFLDVNQTQVGADYPYGKRLSLGVEYNSFVTSIQNRVDIPSLKDVRSLLLAFEAQLE
Homology
[Close]
BLAST of Pay0007178 vs. ExPASy TrEMBL
Match: A0A0A0KE31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419520 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.7e-26
Identity = 62/67 (92.54%), Postives = 64/67 (95.52%), Query Frame = 0 

Query: 1   MEFAAVRFHSDKENLPPFTHKLHPSIPKKPIIRRRLNRKPLQDITNSFENTIRFGSIQDG 60
           MEF+AVRFHSDKENLPPFTHKL+PSIPKKP IRRRLNRKPL DITNSFENTIR GSIQDG
Sbjct: 61  MEFSAVRFHSDKENLPPFTHKLYPSIPKKPTIRRRLNRKPLLDITNSFENTIRLGSIQDG 120

Query: 61  FIASVES 68
           FIASVES
Sbjct: 121 FIASVES 127

[Close]
BLAST of Pay0007178 vs. ExPASy TrEMBL
Match: A0A6J1DQX7 (uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022315 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.0e-06
Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 0 

Query: 41  LQDITNSFENTIRFGSIQDGFIASVESFLDVNQTQVGADYPYGKRLS-----LGVEYNSF 100
           +  +    +N  + GS    ++A ++   D     VG    Y   L+     LG EYN+F
Sbjct: 132 IMGLKTELQNLRKDGSSVSQYLAKIKEIAD-KFAAVGEPLSYRDHLAHVLDGLGSEYNAF 191

Query: 101 VTSIQNRVDIPSLKDVRSLLLAFEAQLE 124
           VTSI NR D PSL+DVRSLLLA+EA+L+
Sbjct: 192 VTSIHNRADSPSLEDVRSLLLAYEARLD 218

[Close]
BLAST of Pay0007178 vs. ExPASy TrEMBL
Match: A0A6J1D6N7 (uncharacterized protein LOC111017438 OS=Momordica charantia OX=3673 GN=LOC111017438 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 9.3e-04
Identity = 24/36 (66.67%), Postives = 33/36 (91.67%), Query Frame = 0 

Query: 88  LGVEYNSFVTSIQNRVDIPSLKDVRSLLLAFEAQLE 124
           LG+EYN+FVTSIQNR D+ +L+DVR+LLLA++ +LE
Sbjct: 52  LGIEYNAFVTSIQNRSDMXTLEDVRTLLLAYDYRLE 87

[Close]
BLAST of Pay0007178 vs. NCBI nr
Match: KGN47955.1 (hypothetical protein Csa_002785 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 3.6e-26
Identity = 62/67 (92.54%), Postives = 64/67 (95.52%), Query Frame = 0 

Query: 1   MEFAAVRFHSDKENLPPFTHKLHPSIPKKPIIRRRLNRKPLQDITNSFENTIRFGSIQDG 60
           MEF+AVRFHSDKENLPPFTHKL+PSIPKKP IRRRLNRKPL DITNSFENTIR GSIQDG
Sbjct: 61  MEFSAVRFHSDKENLPPFTHKLYPSIPKKPTIRRRLNRKPLLDITNSFENTIRLGSIQDG 120

Query: 61  FIASVES 68
           FIASVES
Sbjct: 121 FIASVES 127

[Close]
BLAST of Pay0007178 vs. NCBI nr
Match: KAG6589263.1 (hypothetical protein SDJN03_17828, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 81.6 bits (200), Expect = 5.0e-12
Identity = 44/67 (65.67%), Postives = 49/67 (73.13%), Query Frame = 0 

Query: 1  MEFAAVRFHSDKENLPPFTHKLHPSIPKKPIIRRRLNRKPLQDITNSFENTIRFGSIQDG 60
          MEFAAVRF S KENLP  + K  P   KKPI RRRLNRKPL DITNSFE+++RF  +QD 
Sbjct: 1  MEFAAVRFPSGKENLPLLSQKQFPPNQKKPITRRRLNRKPLADITNSFESSVRFSFVQD- 60

Query: 61 FIASVES 68
             SVES
Sbjct: 61 HSGSVES 66

[Close]
BLAST of Pay0007178 vs. NCBI nr
Match: XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia])

HSP 1 Score: 62.0 bits (149), Expect = 4.1e-06
Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 0 

Query: 41  LQDITNSFENTIRFGSIQDGFIASVESFLDVNQTQVGADYPYGKRLS-----LGVEYNSF 100
           +  +    +N  + GS    ++A ++   D     VG    Y   L+     LG EYN+F
Sbjct: 132 IMGLKTELQNLRKDGSSVSQYLAKIKEIAD-KFAAVGEPLSYRDHLAHVLDGLGSEYNAF 191

Query: 101 VTSIQNRVDIPSLKDVRSLLLAFEAQLE 124
           VTSI NR D PSL+DVRSLLLA+EA+L+
Sbjct: 192 VTSIHNRADSPSLEDVRSLLLAYEARLD 218

The following BLAST results are available for this feature:
BLAST of Pay0007178 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0007178 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KE311.7e-2692.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419520 PE=4 SV=1[more]
A0A6J1DQX72.0e-0640.91uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1D6N79.3e-0466.67uncharacterized protein LOC111017438 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
BLAST of Pay0007178 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47955.13.6e-2692.54hypothetical protein Csa_002785 [Cucumis sativus][more]
KAG6589263.15.0e-1265.67hypothetical protein SDJN03_17828, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022155181.14.1e-0640.91uncharacterized protein LOC111022315 [Momordica charantia][more]
BLAST of Pay0007178 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0007178.1Pay0007178.1mRNA