Pay0006788 (gene) Melon (Payzawat) v1

Overview


Name	Pay0006788
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	60S ribosomal protein L38
Location	chr11: 32166418 .. 32168457 (+)
RNA-Seq Expression	Pay0006788
Synteny	Pay0006788

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCTTCTTAAATTGGGCTTAATTGAATTCACGGCCCATCTAGGGTTTGGAACAAGCCAGCTTCATCTCCTTCTTTGTTGCTCATTGAATCCCTACATAAATAACAACTTTCAAAACTAGGGCTTTGAGCCTCCGCAATCAGCAACTACGCGGCAGTCTCAGTTCTGCCACCAAAATGGTACCTCTCAAGTTCTAATCCCTGATTTAATTGCTTCTCTATTGTTCATATTCTTAATGCATTCATGATTCAACCTACTTTTGATTTCTGATGATTGCTGTCGCCGATTTTTCATCTGCCCTGAATTAGCTTCTGTTCTGTCTAGTTGAACGTTGTGAGGGTGCATATCCTCATCTAATTTTCTATTCTCATTGAAATCCGATGCGTTCCTTATGTTTTTGTTGTTTAAGGTTTATGCGGATTTAAGTAACCGTAATGTATATGTCTCCCTCTCGTTTGGATATCTTATGCTTTGGGTTATTTTGTGAGTAATCAAATTGTGTCTTCTTGTTCTATATTTGAATTTGCAGCCGAAACAAATTCATGAGATCAAAGATTTCCTTCTCACTGCTAGAAGGAAGGATGCTCGTTCTGTGAAAATTAAGAGGAGCAAAGATGTGGTGAAGTTCAAAGTACGATGCTCCAAATATCTTTATACTCTTTGTGTTTTCGACTCGGAGAAGGCAGACAAGTTGAAGCAATCCCTTCCACCAGGTTAGATTCACATTCTTAATAACAAACATTAGAATGCTATATTGGAAGTGGCTACTACTGTATGTTGTTTAAGTGTTTTTAAATGGTTTGATAGATTAGAAGTGTTCCATAATTTGTTTGTGGCGACTATAAATTTCCTAGAAAGAGGGTAATAACACTCACATGTGCTTCCATCATCGGATTTTAGCTAAAAGGATCTTTAATCTCCTAAAACGCACCTTTTCTTTTACTAAATTCTCTAATAGTATTAATTGACCTTCTCTCACTAATCTCTCCCTAGTGAACTTTTTTTCCTACAACATCGCATTTTCATCTTACTTCCTCGCGTACGTTCCGTGAGAAAAATTTGCGCATTTTCATCTTACTTCTCTCACTAAGTCTCAACCTGCTTAGCTATAAAAGTAAATTGCTTTCTGCGACTCTGTAGACGGGCAAAATCATTTGACGTGAGACGACGTTTAGACCTTTTAGGTGTTTAGAGATCAGAGATTTGTGGCTAGTGGGCTGAGGTTGGTTTTCTCCCCTCCTCTCATGTATGTTTTTCCCTGGGTTATGACCCAAGAAACCTTCCCTCTTGGAACCTTGTGTGGTGGATTAGATGCACAGAAGACTTGCTTCTTGAGGGATTTTTTGTGGCAAGTGGTTAATGAGGGAAAATGGAATTGGGAGCTTGTGGGAAAACTAGCGAGCCTGGGGTTTAGAATTAGAGAATTAAATTGCTGTGGTGCTTTCTGAGTCTACTATCTTTTACTTGGGTTCGGTCGTAATTTGTTCAACTGGGAACAAACGAATTTCATGGCTCTTATATTTGACTGTATGGGACAATACCTAAAAGGTTACGTACTTAATCTGGTAGGATATCCATTGAAAAGTAAATGCTTTTGATAGGCTTTCGAGGAACTTGTCTCTTTACTACACTGTTCTTTATCATCCTTTGTCAAAAATTGGAGGAAGATTTGGATCATATCTTGTAGAGATATGAGTTGGTCTAGTCTTTTGTAATTATTCTTTAGGTTTCTTTGCTTTGCTGACAGCCTGACACCTTTTCTTCTGTCGTGTTCCCTTTTGTGGGTTGGTATTTTGGATAATGGTGTGTTCTTCCATGTCTTTTCATTGAAAGGCGGGTTCTGTATACATAAGATCACCTGTCGTTGTTTTAGTTTATGGTCACCTTTTTCAACAAAAAGATCTCTATAATCCTTTCCTCAATAGGATCTGTAAAATGAGATGAGGATGGGTTCGGTCCTGACTATAAATTGATATTGACAGAGAAACCTGACATTTACTTCTCAACTTTTGCAGGTTTGAGTGTACAAGATCTGTGA

mRNA sequence

ATGGGCCTTCTTAAATTGGGCTTAATTGAATTCACGGCCCATCTAGGGGCTTTGAGCCTCCGCAATCAGCAACTACGCGGCAGTCTCAGTTCTGCCACCAAAATGCCGAAACAAATTCATGAGATCAAAGATTTCCTTCTCACTGCTAGAAGGAAGGATGCTCGTTCTGTGAAAATTAAGAGGAGCAAAGATGTGGTGAAGTTCAAAGTACGATGCTCCAAATATCTTTATACTCTTTGTGTTTTCGACTCGGAGAAGGCAGACAAGTTGAAGCAATCCCTTCCACCAGGTTTGAGTGTACAAGATCTGTGA

Coding sequence (CDS)

ATGGGCCTTCTTAAATTGGGCTTAATTGAATTCACGGCCCATCTAGGGGCTTTGAGCCTCCGCAATCAGCAACTACGCGGCAGTCTCAGTTCTGCCACCAAAATGCCGAAACAAATTCATGAGATCAAAGATTTCCTTCTCACTGCTAGAAGGAAGGATGCTCGTTCTGTGAAAATTAAGAGGAGCAAAGATGTGGTGAAGTTCAAAGTACGATGCTCCAAATATCTTTATACTCTTTGTGTTTTCGACTCGGAGAAGGCAGACAAGTTGAAGCAATCCCTTCCACCAGGTTTGAGTGTACAAGATCTGTGA

Protein sequence

MGLLKLGLIEFTAHLGALSLRNQQLRGSLSSATKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL

Homology

[Close]

BLAST of Pay0006788 vs. ExPASy Swiss-Prot
Match: O22860 (60S ribosomal protein L38 OS=Arabidopsis thaliana OX=3702 GN=RPL38A PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 5.5e-31
Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 35  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 94
           MPKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60

Query: 95  PPGLSVQDL 104
           PPGLSVQDL
Sbjct: 61  PPGLSVQDL 69

[Close]

BLAST of Pay0006788 vs. ExPASy Swiss-Prot
Match: P46291 (60S ribosomal protein L38 OS=Solanum lycopersicum OX=4081 GN=RPL38 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 6.7e-29
Identity = 63/69 (91.30%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 35  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 94
           MPKQIHEIKDFLLTARRKDAR+VKIK++KD+VKFKVRCSKYLYTLCV D EKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARTVKIKKNKDMVKFKVRCSKYLYTLCVSDFEKADKLKQSL 60

Query: 95  PPGLSVQDL 104
           PPGLSVQDL
Sbjct: 61  PPGLSVQDL 69

[Close]

BLAST of Pay0006788 vs. ExPASy Swiss-Prot
Match: Q95V84 (60S ribosomal protein L38 OS=Branchiostoma belcheri OX=7741 GN=RPL38 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 9.1e-26
Identity = 57/69 (82.61%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 35  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 94
           MPKQIHEIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKADKLKQSL 60

Query: 95  PPGLSVQDL 104
           PPGL+V++L
Sbjct: 61  PPGLAVKEL 69

[Close]

BLAST of Pay0006788 vs. ExPASy Swiss-Prot
Match: Q9JJI8 (60S ribosomal protein L38 OS=Mus musculus OX=10090 GN=Rpl38 PE=1 SV=3)

HSP 1 Score: 111.7 bits (278), Expect = 5.0e-24
Identity = 54/69 (78.26%), Postives = 64/69 (92.75%), Query Frame = 0


Query: 35  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 94
           MP++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSL
Sbjct: 1   MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60

Query: 95  PPGLSVQDL 104
           PPGL+V+DL
Sbjct: 61  PPGLAVKDL 69

[Close]

BLAST of Pay0006788 vs. ExPASy Swiss-Prot
Match: Q32PB9 (60S ribosomal protein L38 OS=Bos taurus OX=9913 GN=RPL38 PE=3 SV=4)

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-23
Identity = 53/69 (76.81%), Postives = 64/69 (92.75%), Query Frame = 0


Query: 35  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 94
           MP++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSL
Sbjct: 1   MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60

Query: 95  PPGLSVQDL 104
           PPGL+V++L
Sbjct: 61  PPGLAVKEL 69

[Close]

BLAST of Pay0006788 vs. ExPASy TrEMBL
Match: A0A5J5ADJ5 (GRAS domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_034632 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.7e-30
Identity = 72/86 (83.72%), Postives = 78/86 (90.70%), Query Frame = 0


Query: 18  LSLRNQQLRGSLSSATKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLY 77
           L+L+ + +R   +   +MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLY
Sbjct: 416 LTLKEEAVRKFANPEPEMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLY 475

Query: 78  TLCVFDSEKADKLKQSLPPGLSVQDL 104
           TLCVFDSEKADKLKQSLPPGLSVQDL
Sbjct: 476 TLCVFDSEKADKLKQSLPPGLSVQDL 501

[Close]

BLAST of Pay0006788 vs. ExPASy TrEMBL
Match: A0A7C9DRH8 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.2e-30
Identity = 75/95 (78.95%), Postives = 81/95 (85.26%), Query Frame = 0


Query: 11  FTAH--LGALSLRNQQLRGSLSSATKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKF 70
           +T H  +G  S + +  R +   + KMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKF
Sbjct: 11  YTQHPAVGRESAKLEVGRRAFQPSRKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKF 70

Query: 71  KVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 104
           KVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL
Sbjct: 71  KVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 105

[Close]

BLAST of Pay0006788 vs. ExPASy TrEMBL
Match: A0A068VBT7 (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00007069001 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.7e-30
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 30  SSATKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADK 89
           SS+  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADK
Sbjct: 31  SSSLNMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADK 90

Query: 90  LKQSLPPGLSVQDL 104
           LKQSLPPGLSVQDL
Sbjct: 91  LKQSLPPGLSVQDL 104

[Close]

BLAST of Pay0006788 vs. ExPASy TrEMBL
Match: A0A068U8M1 (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00018662001 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.7e-30
Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 32  ATKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLK 91
           A KMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLK
Sbjct: 33  APKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLK 92

Query: 92  QSLPPGLSVQDL 104
           QSLPPGLSVQDL
Sbjct: 93  QSLPPGLSVQDL 104

[Close]

BLAST of Pay0006788 vs. ExPASy TrEMBL
Match: A0A4D6T016 (60S ribosomal protein L38-like protein (Fragment) OS=Coffea canephora OX=49390 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.7e-30
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 30  SSATKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADK 89
           SS+  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADK
Sbjct: 12  SSSLNMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADK 71

Query: 90  LKQSLPPGLSVQDL 104
           LKQSLPPGLSVQDL
Sbjct: 72  LKQSLPPGLSVQDL 85

[Close]

BLAST of Pay0006788 vs. NCBI nr
Match: XP_038906668.1 (60S ribosomal protein L38-like [Benincasa hispida])

HSP 1 Score: 168.7 bits (426), Expect = 2.6e-38
Identity = 95/127 (74.80%), Postives = 97/127 (76.38%), Query Frame = 0


Query: 1   MGLLKLGLIEFTAH------------------------LGALSLRNQQLRGSLSSATKMP 60
           MGLL +GL + TAH                        LG LSL NQQL GSLSSATKMP
Sbjct: 1   MGLLGMGLSQLTAHLGFGTTQHHRRFPLNLLINNNFQKLGFLSLHNQQLLGSLSSATKMP 60

Query: 61  KQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP 104
           KQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP
Sbjct: 61  KQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPP 120

[Close]

BLAST of Pay0006788 vs. NCBI nr
Match: KAE8646721.1 (hypothetical protein Csa_005163 [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 9.7e-33
Identity = 77/86 (89.53%), Postives = 80/86 (93.02%), Query Frame = 0


Query: 18  LSLRNQQLRGSLSSATKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLY 77
           L+L NQQLRGSL SATKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLY
Sbjct: 66  LTLHNQQLRGSLCSATKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLY 125

Query: 78  TLCVFDSEKADKLKQSLPPGLSVQDL 104
           TLCVFDSEKADKLKQSLPP    ++L
Sbjct: 126 TLCVFDSEKADKLKQSLPPDYDPRNL 151

[Close]

BLAST of Pay0006788 vs. NCBI nr
Match: KAA8527271.1 (hypothetical protein F0562_034632 [Nyssa sinensis])

HSP 1 Score: 141.7 bits (356), Expect = 3.4e-30
Identity = 72/86 (83.72%), Postives = 78/86 (90.70%), Query Frame = 0


Query: 18  LSLRNQQLRGSLSSATKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLY 77
           L+L+ + +R   +   +MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLY
Sbjct: 416 LTLKEEAVRKFANPEPEMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLY 475

Query: 78  TLCVFDSEKADKLKQSLPPGLSVQDL 104
           TLCVFDSEKADKLKQSLPPGLSVQDL
Sbjct: 476 TLCVFDSEKADKLKQSLPPGLSVQDL 501

[Close]

BLAST of Pay0006788 vs. NCBI nr
Match: QCG74680.1 (60S ribosomal protein L38-like protein, partial [Coffea canephora])

HSP 1 Score: 140.6 bits (353), Expect = 7.7e-30
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 30  SSATKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADK 89
           SS+  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADK
Sbjct: 12  SSSLNMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADK 71

Query: 90  LKQSLPPGLSVQDL 104
           LKQSLPPGLSVQDL
Sbjct: 72  LKQSLPPGLSVQDL 85

[Close]

BLAST of Pay0006788 vs. NCBI nr
Match: CDP04642.1 (unnamed protein product [Coffea canephora])

HSP 1 Score: 140.6 bits (353), Expect = 7.7e-30
Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 32  ATKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLK 91
           A KMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLK
Sbjct: 33  APKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLK 92

Query: 92  QSLPPGLSVQDL 104
           QSLPPGLSVQDL
Sbjct: 93  QSLPPGLSVQDL 104

[Close]

BLAST of Pay0006788 vs. TAIR 10
Match: AT2G43460.1 (Ribosomal L38e protein family )

HSP 1 Score: 134.8 bits (338), Expect = 3.9e-32
Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 35  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 94
           MPKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60

Query: 95  PPGLSVQDL 104
           PPGLSVQDL
Sbjct: 61  PPGLSVQDL 69

[Close]

BLAST of Pay0006788 vs. TAIR 10
Match: AT3G59540.1 (Ribosomal L38e protein family )

HSP 1 Score: 134.8 bits (338), Expect = 3.9e-32
Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 35  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 94
           MPKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60

Query: 95  PPGLSVQDL 104
           PPGLSVQDL
Sbjct: 61  PPGLSVQDL 69

The following BLAST results are available for this feature:

BLAST of Pay0006788 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22860	5.5e-31	95.65	60S ribosomal protein L38 OS=Arabidopsis thaliana OX=3702 GN=RPL38A PE=3 SV=1	[more]
P46291	6.7e-29	91.30	60S ribosomal protein L38 OS=Solanum lycopersicum OX=4081 GN=RPL38 PE=3 SV=1	[more]
Q95V84	9.1e-26	82.61	60S ribosomal protein L38 OS=Branchiostoma belcheri OX=7741 GN=RPL38 PE=3 SV=1	[more]
Q9JJI8	5.0e-24	78.26	60S ribosomal protein L38 OS=Mus musculus OX=10090 GN=Rpl38 PE=1 SV=3	[more]
Q32PB9	1.5e-23	76.81	60S ribosomal protein L38 OS=Bos taurus OX=9913 GN=RPL38 PE=3 SV=4	[more]

BLAST of Pay0006788 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5J5ADJ5	1.7e-30	83.72	GRAS domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_034632 PE=3 ...	[more]
A0A7C9DRH8	2.2e-30	78.95	Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=3 SV=1	[more]
A0A068VBT7	3.7e-30	95.95	Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00007069001 PE=3 ...	[more]
A0A068U8M1	3.7e-30	98.61	Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00018662001 PE=3 ...	[more]
A0A4D6T016	3.7e-30	95.95	60S ribosomal protein L38-like protein (Fragment) OS=Coffea canephora OX=49390 P...	[more]

BLAST of Pay0006788 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906668.1	2.6e-38	74.80	60S ribosomal protein L38-like [Benincasa hispida]	[more]
KAE8646721.1	9.7e-33	89.53	hypothetical protein Csa_005163 [Cucumis sativus]	[more]
KAA8527271.1	3.4e-30	83.72	hypothetical protein F0562_034632 [Nyssa sinensis]	[more]
QCG74680.1	7.7e-30	95.95	60S ribosomal protein L38-like protein, partial [Coffea canephora]	[more]
CDP04642.1	7.7e-30	98.61	unnamed protein product [Coffea canephora]	[more]

BLAST of Pay0006788 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43460.1	3.9e-32	95.65	Ribosomal L38e protein family	[more]
AT3G59540.1	3.9e-32	95.65	Ribosomal L38e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002675	Ribosomal protein L38e	PFAM	PF01781	Ribosomal_L38e	coord: 36..102 e-value: 7.9E-34 score: 115.6
IPR002675	Ribosomal protein L38e	PANTHER	PTHR10965	60S RIBOSOMAL PROTEIN L38	coord: 35..103
IPR038464	Ribosomal protein L38e superfamily	GENE3D	3.30.720.90		coord: 35..103 e-value: 6.0E-36 score: 124.4
None	No IPR available	PANTHER	PTHR10965:SF18	SUBFAMILY NOT NAMED	coord: 35..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0006788.1	Pay0006788.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022618	ribonucleoprotein complex assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome