Pay0006695 (gene) Melon (Payzawat) v1

Overview


Name	Pay0006695
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	chr06: 27010012 .. 27010779 (-)
RNA-Seq Expression	Pay0006695
Synteny	Pay0006695

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGGTTGCAGAAGCAAGTGTCTCAGCTTGTCTGTGAGAATGGGTATATGCACCAAGATTTGCAATAAACTACTAATGTATGTCTTTCTCCTCCTGTTTTTTTTATCTTCTGAGATCATTTCATCTTAACTCTCTCTTTCACATTTTAAGTAGCTCTAATTTTATGTTATATTGATATTTGCCTTAATTCACTTTGAAAAATGGATGTCCTGTGTTGAAGATTTATGAGAATTATGGATTGAAATGATCAATACTTGTGTGGATCATTGTTTGTCTATTGATTGCATTTCAATTGTTTTCTAGGAACCACCAGCAACAATTACTGATGCAAGTTGTGACTCAGGTTGTGACTCAGTGTCTACTATGCCTCAGCATTCACTTAGAGATGCTAGTAGCCCTACTGGGTAATTTTAGAGGCACATTTTATGTTATTTCTTACATTGTTTATCAAGCTATATTGTTAATTTACCTTATCTAATTTATAACAGTTATGACCAACTCTTGTCTATTGCAGAGGAGATTTTGGTAGCCTTCTTGTCAAAGACTACAGAAACTGCTGTCAATTGGGATCAGATGCATTGGATGAAAGTTAATTCACTTTCGTATGTTGTTCATAAGTTAATATTCCTTAGCCTAATAGGATTTCTAATATGGATTTGTTGCGGGAATGTTTCATCCAGCTTGGTCTGGATTCGGTGGGAATCTTTGCCATTTCACAAAGTTGTAGTGGAGTGGTTGCACAAGCTTGTGGTCTTGTTAATTTAG

mRNA sequence

ATGATAGGTTGCAGAAGCAAGTGTCTCAGCTTGTCTGTGAGAATGGGTATATGCACCAAGATTTGCAATAAACTACTAATGAACCACCAGCAACAATTACTGATGCAAGTTGTGACTCAGGTTGTGACTCAGTGTCTACTATGCCTCAGCATTCACTTAGAGATGCTAGTAGCCCTACTGGAGGAGATTTTGGTAGCCTTCTTGTCAAAGACTACAGAAACTGCTGTCAATTGGGATCAGATGCATTGGATGAAAGTTAATTCACTTTCGTATGTTGTTCATAAGTTAATATTCCTTAGCCTAATAGGATTTCTAATATGGATTTGTTGCGGGAATGTTTCATCCAGCTTGGTCTGGATTCGGTGGGAATCTTTGCCATTTCACAAAGTTGTAGTGGAGTGGTTGCACAAGCTTGTGGTCTTGTTAATTTAG

Coding sequence (CDS)

ATGATAGGTTGCAGAAGCAAGTGTCTCAGCTTGTCTGTGAGAATGGGTATATGCACCAAGATTTGCAATAAACTACTAATGAACCACCAGCAACAATTACTGATGCAAGTTGTGACTCAGGTTGTGACTCAGTGTCTACTATGCCTCAGCATTCACTTAGAGATGCTAGTAGCCCTACTGGAGGAGATTTTGGTAGCCTTCTTGTCAAAGACTACAGAAACTGCTGTCAATTGGGATCAGATGCATTGGATGAAAGTTAATTCACTTTCGTATGTTGTTCATAAGTTAATATTCCTTAGCCTAATAGGATTTCTAATATGGATTTGTTGCGGGAATGTTTCATCCAGCTTGGTCTGGATTCGGTGGGAATCTTTGCCATTTCACAAAGTTGTAGTGGAGTGGTTGCACAAGCTTGTGGTCTTGTTAATTTAG

Protein sequence

MIGCRSKCLSLSVRMGICTKICNKLLMNHQQQLLMQVVTQVVTQCLLCLSIHLEMLVALLEEILVAFLSKTTETAVNWDQMHWMKVNSLSYVVHKLIFLSLIGFLIWICCGNVSSSLVWIRWESLPFHKVVVEWLHKLVVLLI

Homology

[Close]

BLAST of Pay0006695 vs. ExPASy TrEMBL
Match: A0A1S4DZS1 (uncharacterized protein LOC103493420 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493420 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 9.3e-72
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MIGCRSKCLSLSVRMGICTKICNKLLMNHQQQLLMQVVTQVVTQCLLCLSIHLEMLVALL 60
           MIGCRSKCLSLSVRMGICTKICNKLLMNHQQQLLMQVVTQVVTQCLLCLSIHLEMLVALL
Sbjct: 1   MIGCRSKCLSLSVRMGICTKICNKLLMNHQQQLLMQVVTQVVTQCLLCLSIHLEMLVALL 60

Query: 61  EEILVAFLSKTTETAVNWDQMHWMKVNSLSYVVHKLIFLSLIGFLIWICCGNVSSSLVWI 120
           EEILVAFLSKTTETAVNWDQMHWMKVNSLSYVVHKLIFLSLIGFLIWICCGNVSSSLVWI
Sbjct: 61  EEILVAFLSKTTETAVNWDQMHWMKVNSLSYVVHKLIFLSLIGFLIWICCGNVSSSLVWI 120

Query: 121 RWESLPFHKVVVEWLHKLVVLLI 144
           RWESLPFHKVVVEWLHKLVVLLI
Sbjct: 121 RWESLPFHKVVVEWLHKLVVLLI 143

[Close]

BLAST of Pay0006695 vs. ExPASy TrEMBL
Match: A0A1S4DZ14 (uncharacterized protein LOC103493420 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493420 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 9.3e-64
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 15  MGICTKICNKLLMNHQQQLLMQVVTQVVTQCLLCLSIHLEMLVALLEEILVAFLSKTTET 74
           MGICTKICNKLLMNHQQQLLMQVVTQVVTQCLLCLSIHLEMLVALLEEILVAFLSKTTET
Sbjct: 1   MGICTKICNKLLMNHQQQLLMQVVTQVVTQCLLCLSIHLEMLVALLEEILVAFLSKTTET 60

Query: 75  AVNWDQMHWMKVNSLSYVVHKLIFLSLIGFLIWICCGNVSSSLVWIRWESLPFHKVVVEW 134
           AVNWDQMHWMKVNSLSYVVHKLIFLSLIGFLIWICCGNVSSSLVWIRWESLPFHKVVVEW
Sbjct: 61  AVNWDQMHWMKVNSLSYVVHKLIFLSLIGFLIWICCGNVSSSLVWIRWESLPFHKVVVEW 120

Query: 135 LHKLVVLLI 144
           LHKLVVLLI
Sbjct: 121 LHKLVVLLI 129

[Close]

BLAST of Pay0006695 vs. NCBI nr
Match: XP_016901230.1 (PREDICTED: uncharacterized protein LOC103493420 isoform X1 [Cucumis melo])

HSP 1 Score: 279.3 bits (713), Expect = 1.9e-71
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MIGCRSKCLSLSVRMGICTKICNKLLMNHQQQLLMQVVTQVVTQCLLCLSIHLEMLVALL 60
           MIGCRSKCLSLSVRMGICTKICNKLLMNHQQQLLMQVVTQVVTQCLLCLSIHLEMLVALL
Sbjct: 1   MIGCRSKCLSLSVRMGICTKICNKLLMNHQQQLLMQVVTQVVTQCLLCLSIHLEMLVALL 60

Query: 61  EEILVAFLSKTTETAVNWDQMHWMKVNSLSYVVHKLIFLSLIGFLIWICCGNVSSSLVWI 120
           EEILVAFLSKTTETAVNWDQMHWMKVNSLSYVVHKLIFLSLIGFLIWICCGNVSSSLVWI
Sbjct: 61  EEILVAFLSKTTETAVNWDQMHWMKVNSLSYVVHKLIFLSLIGFLIWICCGNVSSSLVWI 120

Query: 121 RWESLPFHKVVVEWLHKLVVLLI 144
           RWESLPFHKVVVEWLHKLVVLLI
Sbjct: 121 RWESLPFHKVVVEWLHKLVVLLI 143

[Close]

BLAST of Pay0006695 vs. NCBI nr
Match: XP_016901231.1 (PREDICTED: uncharacterized protein LOC103493420 isoform X2 [Cucumis melo])

HSP 1 Score: 252.7 bits (644), Expect = 1.9e-63
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 15  MGICTKICNKLLMNHQQQLLMQVVTQVVTQCLLCLSIHLEMLVALLEEILVAFLSKTTET 74
           MGICTKICNKLLMNHQQQLLMQVVTQVVTQCLLCLSIHLEMLVALLEEILVAFLSKTTET
Sbjct: 1   MGICTKICNKLLMNHQQQLLMQVVTQVVTQCLLCLSIHLEMLVALLEEILVAFLSKTTET 60

Query: 75  AVNWDQMHWMKVNSLSYVVHKLIFLSLIGFLIWICCGNVSSSLVWIRWESLPFHKVVVEW 134
           AVNWDQMHWMKVNSLSYVVHKLIFLSLIGFLIWICCGNVSSSLVWIRWESLPFHKVVVEW
Sbjct: 61  AVNWDQMHWMKVNSLSYVVHKLIFLSLIGFLIWICCGNVSSSLVWIRWESLPFHKVVVEW 120

Query: 135 LHKLVVLLI 144
           LHKLVVLLI
Sbjct: 121 LHKLVVLLI 129

[Close]

BLAST of Pay0006695 vs. NCBI nr
Match: XP_038894236.1 (homeobox-leucine zipper protein REVOLUTA-like isoform X2 [Benincasa hispida])

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-05
Identity = 36/46 (78.26%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 40 QVVTQCLLCLSIHLEMLVALLEEILVAFLSKTTETAVNWDQMHWMK 86
          Q+VTQ LL LSIHLEMLVALLEEIL AFLSK T TAV+W QM  MK
Sbjct: 2  QLVTQWLLPLSIHLEMLVALLEEILAAFLSKATGTAVDWVQMPGMK 47

The following BLAST results are available for this feature:

BLAST of Pay0006695 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0006695 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DZS1	9.3e-72	100.00	uncharacterized protein LOC103493420 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DZ14	9.3e-64	100.00	uncharacterized protein LOC103493420 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Pay0006695 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901230.1	1.9e-71	100.00	PREDICTED: uncharacterized protein LOC103493420 isoform X1 [Cucumis melo]	[more]
XP_016901231.1	1.9e-63	100.00	PREDICTED: uncharacterized protein LOC103493420 isoform X2 [Cucumis melo]	[more]
XP_038894236.1	1.4e-05	78.26	homeobox-leucine zipper protein REVOLUTA-like isoform X2 [Benincasa hispida]	[more]

BLAST of Pay0006695 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0006695.1	Pay0006695.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane