Pay0006236 (gene) Melon (Payzawat) v1

Overview
NamePay0006236
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionProtein PXR1
Locationchr11: 32629337 .. 32635402 (-)
RNA-Seq ExpressionPay0006236
SyntenyPay0006236
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCGTAAACCTATTTTGTTTTATGTCTTTCTCATAAAAAGAAAACAATCGGAAGAATTCCCAGCGGTCTTCGTCGGCGGCGGCGATTGAGTCTACACTCCGGTTTTCAACTCCGACGCAGGGCTGCAAATTTGATTATCGAGGGAAAAGGCGAGATGGGAGGCAAAGGAATGCGGAGGAGAGAGCGGAATTACAGAGCTGCTCATGGCGGCTACGATCGTCTCCCGCCGCCGCCTGACACTTCCCAAGCCGATACTTTACCTTCTAAACTCCGCAAGTTAATGTCCTTTACTTCCTCTCGATCTCAAGGTTTGTTTAGTTGTTTCTTTGCGTTTTTTTTTTTTTTTTTTTTTTTTTGTCTAGCGATGTTTTTATTTAATTTCATGCTCCTTGTGTTCTCACAGAGTCTGAGGTCTCTGAAGATCTTCAGCGAAAGCGCAAGAGAGATGCCTTTAATACTGAAAAGGTAATTGATATTTTCTTTGATTCTTCACCGTCTTAGGTAAAGTGGCTTTTATTTGAATGATTTTGTCTTGGGGGCTGATACTGGATTAGGTGAACGAAGGTCGACAATGAATCTTTTAGTGTATCTCAGTCTCTAATCAATGTCATTGTTATAAGCTTGCTTGCAAGAAAGTTGAGATTAAGCATCACTAGGCATCCTTAGTCTTTTTGTTCAATCATCTTCTTCTTTGGTTGCCCTCGTCGTACTGAGTATCTGGTTTGCCGTTAAAGTAGAATATATCTACTAGTAGTTTCTATTGTTTATTCTGTTATTATTATTAGGCCTGCTCTCGAGTTTAAGCTAACTCCCTCTGAACGGGGATACAACATTGTTCGTATCAAGAGCTTGATAACGCATCGTATGCCTATATTATGTGTTACTCATTTGTAATTTGACTTTCACTTTCTGTATAGAAATCCAATCAAAAGGATGCTTCGGGAAGATCCGATGTAAAGAGCAAAGCTAATGGTGGGAATTCTCAAATGCCTCAACGTACGGGTAGTGATATTGACGATGTGCAAAGCAAGTCCAGTGAGAAGAAAAACAAAAAACGAAAGAGAAAGCAAGTTACTGACCTTCGTTTTGAAGACTCTTTGGAGGAATCAAGTCGACGTTTAAAGAAGCGCGAACGTCGGAAAAAGTAAGCACTTTAATGCACCAACAATTGTGTTCTCTTATCTTTTATAAGGCCACTGACGTTTTTATTATTGAGATAACATGTTCATCTTCATTTTGCATTTTTTAAAGTCAACTTAGTTCAACGGTTATTAGCATGACCTTCCATCCTAGAGGTGAGAGGTTTGATCCCCCGTCCTGACATATCAACAAGTGGAAATATCATTAAGTTTTTAATGTGTTATTTAAAAGAATGAAGAGAAGTGCCCAGAATTTGTAATGTCCTAATGTTTTCTTTTTGGTAGTGATATGAGTTGGCAGTCTGAGAGAACCCCATATACCTCAGTTTTGTCAACTTACTGCCCAAGTAAGTTTTGAGTAATGTGAATTGTGATTATGCAAGTGTTATGTGGATTAGAGAGGAAGTTATAGTGACTATTGATGTTATGGCCTGAGGTTCTCAATGCACCATCTGAGACATGTCAGGGTATGTTTTTAGCACATAATTTCTAAATGGTGTGAAATAAAAAGTTAGGTCAGTCGATTCTCATGCATTGAGGCAGATGATGGAATTGAGAGAGTTGAGGATAAGCTTTTACATTCAGTAGAAGGTGTAAACGTTGATTATATTAGGAATTGGAATTCCAGATTGGTTTGGCACCCGTGTTACTCTTGTCCCAAAAAGCGCATGCTAACTTCATTTGCAGCTCTAATGGCCTACTTTCGGGAGGAACTGATGTTGGTAAAAAAGGGATCAACAATCAAGAGGTGCCTTGAGCTTCATGCTCAGAGGGAAAGAGGTTGTGCTCGAGCTTGGCCATTGGGAGTGCAATTTACAGTAGAAATGCAATTGTTGATCGTTGATGTTGATGATGGAAAGATCGTGCGTAGATGAGGACGGTGCGACAACTTATGACCTCACTTGAACCAGATCTATTTTATAGGTTGTACAACTGTTTCTGAGTTCTAAAGATGATGATGTCTTCGGTTAACGGGTGTCAAATTAGACAGTATTGGAGAGGTTACTTTGAATTCAACTTTGGATATTATCAACTCTCAAACAATATGTTTGAAGAGGATAATTGGAGAGCAAGAAGTAATCGGGCACTTTGACCTTGGGAATGGATCTTGAATTTAGGAGAACAAAAACGTTAGTGGAAGTGAAAATTATGGATGGAATTAGAAGTGAAACTAGAGCAATCAACTTTGAGGGATTTGAGGCATCGAAATTGAATCAAAGGGGAAGAAACTATCCAAATTCATATAGAGGAGCTTGCATGCAAAAGAAAGATAATCAATTAATATTCAATCTGTAAAGTTGTTAGCAATATCAAATTCAAGCAATCAAATTGGAGGAATGTGAGGCATCAAAATCAGAACTAAAGGGGAAGAAAATATCTAATTTCATAGGAGCCTGCATGCAAATGAGATAATCTACGTATATTCCATTTGAGAGTTTAGTGGCAATATCGAAGGAAGGTCAGAAAAGGGTCCTCAGCAAAATGGAAGCATATAAGGGAAGAATTAGGTGGGGTACAGAGTAGAAGCAAGGAATTCGGTATGTAAATCAGAGAGATGAAAGTACTCTCAAAGTTTGTTCCTATGTTTCAACCAGATATCATAGGTTTTTCTAATAGAAACAATTCCAGATCCTCTGGTTATTCAATTCAACATAAGGCTATCGCAGAATTATGGTTACCTTTAAATCCTATGTGTTTCACAATGTTTATTTGATTCTGTACACACTTTTACATTTACCCATTTCGGTATTTTTATAGTGAAAATTTGAGTGCAGAAGGTATCACATACATTTGAACTACCCATGACCATTCCCATTTAATGCTTTATCTTTGACAATTCAATTTATCATGTACAATGGTATAGTAGTAGTAGGTCTATTATATAAACATGGTGAACTGGGAAGCATCCGTTCCCTTTTTAACAGATATACATTCATTTCTAAATAGATATCAGGAGGCGAAGAAAAACAAACATAAAAAAGCCAAGACGGAGGAGGTTCTAGACTTCCCAAGACATGAAAAAATAAAATTTGGAGACGTGGTTGAAGCTCCACTGAAGTTGCTTGCAGTTCCGAAGGTAACATCTAACTGTATGTGGTGAAGTTAAATGACAATTGAACACTCCAATTTGAATACTTGACAATCTTTTCTGTTCCTCTATTACTTGTCACTGTGTTTTCGTATAGGCATTTAAATCTGCACAAGTTGCTTCTCAAGAGAGGAAGCGGTTGCAGGCTATAAATGAGTATAGAAACCGCAAGGGGTGGACTTCAAGGCCAGGGATACAAATACCCTCAATGACTATAGCACCAGCTGATTAATTGTAAGTTTAGAGTTATTCCATTCTGTTGCCATTGGTTTGTTTCCTTTTACTAGAGTCTGAACAGCATGTAGTTACAAATAATATCTCTAAATTTTATTCATTGTCTAAAATAATATTTCTATTCTTTCAAAAGTTCAGTACTACCTTTGACCTCTTATAAATGTTTCAAAACTACATTGAAAATAAAGTTAATTAGAATTTTGGATGAGAAGTCTGGCGAATGTGGCTGTATTCAGGTCCCACCAGACAAGTCCCAATTTTCATAAAAAAATTCTTATAACTTTCAACCTAGGGATAGTTCTGAAACCTTTAGGGTAAGGATAGTTTTGAAACCTTTAGGGTATGTTTGGGGTGAGGTTTTAAGAGGAAAAGAATTAGGAAATTGGACCAAACACGGTTTGGCCCAAGGGTTATGATAAATGGTGATTAGGGTTATTCTAATCCCCAAATACCCTATATTCTCCTATTTTTTCCTTTATTATAATCCTACGTTATCCTACCCAAATAACCAATCCAAATTCTATTATTATTTTTTAAATTATTACAACCATAACCCTTCTGCCAAACACATATTATTATAACACTATTATCATAAATCCCTCTCAAACATATATTATCATAACACTACCTTTTATATTCCTTTCCCCAAACATAGATTACCATAACACTACTAATAACAACCTTTTTCCAAACACATATTGTTATAACTCTTATCCTCCCCCAAAACGCACCCTTAAAAACAAAGATAATATTACATATTTTCATTTTTGTTTGTGATTTTTCTTTACTTGCCTATCATCATCCAAATATATATTTATAAATGTACCTGCAAATTTGTGTCATTTCTCTCTGATTTGCCAACTTGTACAGCAGAGGATCTTAAAAAATCTTCATATTCTGATATCATTCTGCTGGAATATATTTGCGTAACGCATACCAACACAAATACTGACCTGGCACTTGCTTTCCAGTTTTTATTCAAAAGAACACCTTACTAATTTGAGGTTACATTCATAACCATCTGATGTCAGAATTTGCTGCCATCATATTTTCTTTGATATTAAATTCCCTGTCCTCAGTCTGCATATCCCCCCAATGCCCCATGGTAAATTCATTATGAGTCTATGACTACTCATCATGTCCTCAGTCTAGCTCTGACCTAGAACAGAAAATGCCACTCGTCATTCATACTGTTATAGGTCATTGCCAAACTTTTTGAGGTTTCAATTTTTTGATGAAATTTTAGAAGATCTCTGCTCCAATAATAGCTTTGAAACGATTATTGAAGGGTCAGGGATCATATATGAAACTAGGTAAAGATGCCTTGAGTGTGTTTGCTAGGATAGAACTTTGAAGAATTTCTTGAACTCTTATTCCTAAACAATCTATAAAACTTGAAATAGAATTTTGGTGAATTTTCTTTTGAACTGGCATCTTGAAAAGTTCGCCATTCTTAGTTGGCAGATGGATTTTGCATTAATGGTGGTAGTTGTGTTGGGGCAGCAGCAGATTTTGTTTCATTAGGAGGCCATAAGCTGGCAGTGGAATGGGAATCTCTCTCTCTTTAATCAAGTACAGGAGAGTTATCAGAATGTGGTCTAAAAGAGATGATTTGTTCTAAAAATTACCAAGCATTCAACTGAGAAATCAAACCCAAGATTCTCAAAATCTTATCAGAAACAGGTTGTGTGATGAAAGCTGTTATAACCATCTTCTGCTCGTTGTTTCTTTGTATGAGAATAATAGTCTAGTCTTGTTGGTGAAGTTTATGGTTCCAGTTTAATTAGGATGAGAATGCTTTCTTTTTGGTTCAATTATAATTGATGTTTTGTTGTAGAGAGTAAGTTTGTATCAGCTTTATTTCTATACTAAGTTTTTATTTGTTTTTATTTATCTATTCAAATTTATCCTTGTCGATAGTATGTCATGATGGTAAATGTAACAGGAAAGTAACCATGATGGTAATGGGTTGGTCTAATGATAAATAAAAGTTGGTGTATGTAATGAAAATGATTATAATTTTAGTATTATTTAATTAACTTCTATTAGGATATGGATGAGCGGTTGGTCGGTGGTGCATGACAAGTCAAATTATGAGTAATATCAATGTTTCGTGGATTAACGAAGAAGGCTGGAGTGAGTCTTCTTCGATGGAAAACACGAAAATCATCAACATAAAAAAAGAAAAAAAAAAAGGGGACTTCAAGTAAATTTCATGGAATCAACAGTACTTCTAATTGATCACTGACTGAAAGCACAGGAGAGGGCCTACAAGAAGAGAAGCAAAATCAACATATTTTGATGTTCATACGCATTAAAGTTGGAGAAGTACATCTCGATGTAGTTTTGAATCTCAAATAATGTGGAGGTTAGTTTTTACAACTTTTCTACACATATGGAAAGATCATGTATCACACAATTGAGCTACTTAGTATTGAGGAAAAAGTCCCACTCCTATATGTATCTGTCATAAGGCGATAAGTTAAGGCTATAGCATGAAGGGGAAGATAAGAAGTCCATTTGGTTTTTGTTTTGCTTTCAACCTTGTGTTCATTTACTTTAAGTGAGTTCTTTTTCGTGACAAATATAGTTGTTGGAGTGCCT

mRNA sequence

ATCGTAAACCTATTTTGTTTTATGTCTTTCTCATAAAAAGAAAACAATCGGAAGAATTCCCAGCGGTCTTCGTCGGCGGCGGCGATTGAGTCTACACTCCGGTTTTCAACTCCGACGCAGGGCTGCAAATTTGATTATCGAGGGAAAAGGCGAGATGGGAGGCAAAGGAATGCGGAGGAGAGAGCGGAATTACAGAGCTGCTCATGGCGGCTACGATCGTCTCCCGCCGCCGCCTGACACTTCCCAAGCCGATACTTTACCTTCTAAACTCCGCAAGTTAATGTCCTTTACTTCCTCTCGATCTCAAGAGTCTGAGGTCTCTGAAGATCTTCAGCGAAAGCGCAAGAGAGATGCCTTTAATACTGAAAAGAAATCCAATCAAAAGGATGCTTCGGGAAGATCCGATGTAAAGAGCAAAGCTAATGGTGGGAATTCTCAAATGCCTCAACGTACGGGTAGTGATATTGACGATGTGCAAAGCAAGTCCAGTGAGAAGAAAAACAAAAAACGAAAGAGAAAGCAAGTTACTGACCTTCGTTTTGAAGACTCTTTGGAGGAATCAAGTCGACGTTTAAAGAAGCGCGAACGTCGGAAAAAATATCAGGAGGCGAAGAAAAACAAACATAAAAAAGCCAAGACGGAGGAGGTTCTAGACTTCCCAAGACATGAAAAAATAAAATTTGGAGACGTGGTTGAAGCTCCACTGAAGTTGCTTGCAGTTCCGAAGGCATTTAAATCTGCACAAGTTGCTTCTCAAGAGAGGAAGCGGTTGCAGGCTATAAATGAGTATAGAAACCGCAAGGGGTGGACTTCAAGGCCAGGGATACAAATACCCTCAATGACTATAGCACCAGCTGATTAATTCAGCAGATTTTGTTTCATTAGGAGGCCATAAGCTGGCAGTGGAATGGGAATCTCTCTCTCTTTAATCAAGTACAGGAGAGTTATCAGAATGTGGTCTAAAAGAGATGATTTGTTCTAAAAATTACCAAGCATTCAACTGAGAAATCAAACCCAAGATTCTCAAAATCTTATCAGAAACAGGTTGTGTGATGAAAGCTGTTATAACCATCTTCTGCTCGTTGTTTCTTTGTATGAGAATAATAGTCTAGTCTTGTTGGTGAAGTTTATGGTTCCAGTTTAATTAGGATGAGAATGCTTTCTTTTTGGTTCAATTATAATTGATGTTTTGTTGTAGAGAGTAAGTTTGTATCAGCTTTATTTCTATACTAAGTTTTTATTTGTTTTTATTTATCTATTCAAATTTATCCTTGTCGATAGTATGTCATGATGGTAAATGTAACAGGAAAGTAACCATGATGGTAATGGGTTGGTCTAATGATAAATAAAAGTTGGTGTATGTAATGAAAATGATTATAATTTTAGTATTATTTAATTAACTTCTATTAGGATATGGATGAGCGGTTGGTCGGTGGTGCATGACAAGTCAAATTATGAGTAATATCAATGTTTCGTGGATTAACGAAGAAGGCTGGAGTGAGTCTTCTTCGATGGAAAACACGAAAATCATCAACATAAAAAAAGAAAAAAAAAAAGGGGACTTCAAGTAAATTTCATGGAATCAACAGTACTTCTAATTGATCACTGACTGAAAGCACAGGAGAGGGCCTACAAGAAGAGAAGCAAAATCAACATATTTTGATGTTCATACGCATTAAAGTTGGAGAAGTACATCTCGATGTAGTTTTGAATCTCAAATAATGTGGAGGTTAGTTTTTACAACTTTTCTACACATATGGAAAGATCATGTATCACACAATTGAGCTACTTAGTATTGAGGAAAAAGTCCCACTCCTATATGTATCTGTCATAAGGCGATAAGTTAAGGCTATAGCATGAAGGGGAAGATAAGAAGTCCATTTGGTTTTTGTTTTGCTTTCAACCTTGTGTTCATTTACTTTAAGTGAGTTCTTTTTCGTGACAAATATAGTTGTTGGAGTGCCT

Coding sequence (CDS)

ATGGGAGGCAAAGGAATGCGGAGGAGAGAGCGGAATTACAGAGCTGCTCATGGCGGCTACGATCGTCTCCCGCCGCCGCCTGACACTTCCCAAGCCGATACTTTACCTTCTAAACTCCGCAAGTTAATGTCCTTTACTTCCTCTCGATCTCAAGAGTCTGAGGTCTCTGAAGATCTTCAGCGAAAGCGCAAGAGAGATGCCTTTAATACTGAAAAGAAATCCAATCAAAAGGATGCTTCGGGAAGATCCGATGTAAAGAGCAAAGCTAATGGTGGGAATTCTCAAATGCCTCAACGTACGGGTAGTGATATTGACGATGTGCAAAGCAAGTCCAGTGAGAAGAAAAACAAAAAACGAAAGAGAAAGCAAGTTACTGACCTTCGTTTTGAAGACTCTTTGGAGGAATCAAGTCGACGTTTAAAGAAGCGCGAACGTCGGAAAAAATATCAGGAGGCGAAGAAAAACAAACATAAAAAAGCCAAGACGGAGGAGGTTCTAGACTTCCCAAGACATGAAAAAATAAAATTTGGAGACGTGGTTGAAGCTCCACTGAAGTTGCTTGCAGTTCCGAAGGCATTTAAATCTGCACAAGTTGCTTCTCAAGAGAGGAAGCGGTTGCAGGCTATAAATGAGTATAGAAACCGCAAGGGGTGGACTTCAAGGCCAGGGATACAAATACCCTCAATGACTATAGCACCAGCTGATTAA

Protein sequence

MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESEVSEDLQRKRKRDAFNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDIDDVQSKSSEKKNKKRKRKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPAD
Homology
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BLAST of Pay0006236 vs. ExPASy TrEMBL
Match: A0A1S4E2Q2 (LOW QUALITY PROTEIN: protein PXR1 OS=Cucumis melo OX=3656 GN=LOC103499034 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 4.5e-116
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0 

Query: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESEVSEDLQ 60
           MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESEVSEDLQ
Sbjct: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESEVSEDLQ 60

Query: 61  RKRKRDAFNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDIDDVQSKSSEKKNKKRK 120
           RKRKRDAFNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDIDDVQSKSSEKKNKKRK
Sbjct: 61  RKRKRDAFNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDIDDVQSKSSEKKNKKRK 120

Query: 121 RKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEKIKFGDVV 180
           RKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHE IKFGDVV
Sbjct: 121 RKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEXIKFGDVV 180

Query: 181 EAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPAD 236
           EAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPAD
Sbjct: 181 EAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPAD 235

[Close]
BLAST of Pay0006236 vs. ExPASy TrEMBL
Match: A0A5A7TEP7 (Protein PXR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002900 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.3e-115
Identity = 232/235 (98.72%), Postives = 234/235 (99.57%), Query Frame = 0 

Query: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESEVSEDLQ 60
           MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESEVSED+Q
Sbjct: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESEVSEDIQ 60

Query: 61  RKRKRDAFNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDIDDVQSKSSEKKNKKRK 120
           RKRKRDA NTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSD+DDVQSKSSEKKNKKRK
Sbjct: 61  RKRKRDAVNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDVDDVQSKSSEKKNKKRK 120

Query: 121 RKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEKIKFGDVV 180
           RKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEKIKFGDVV
Sbjct: 121 RKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEKIKFGDVV 180

Query: 181 EAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPAD 236
           EAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPAD
Sbjct: 181 EAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPAD 235

[Close]
BLAST of Pay0006236 vs. ExPASy TrEMBL
Match: A0A0A0KEN1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G076790 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.1e-101
Identity = 216/237 (91.14%), Postives = 222/237 (93.67%), Query Frame = 0 

Query: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESE-VSEDL 60
           MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQ DTLPSKLRKLMSFTSSRSQE E VSED+
Sbjct: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQPDTLPSKLRKLMSFTSSRSQEPEKVSEDI 60

Query: 61  QRKRKRDAFNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDID-DVQSKSSEKKNKK 120
           QRKRKR+A NT+KKSNQKDASG     SKANGGNSQMPQR GSD D +V SKSSEKKNKK
Sbjct: 61  QRKRKREAVNTDKKSNQKDASG-----SKANGGNSQMPQRMGSDDDNNVHSKSSEKKNKK 120

Query: 121 RKRKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEKIKFGD 180
           RKRKQVTDLRFEDSLEESSRRLKKRER KKYQEAKKNKHKKAKTEE LDFP+HEKIKFGD
Sbjct: 121 RKRKQVTDLRFEDSLEESSRRLKKRERWKKYQEAKKNKHKKAKTEEYLDFPKHEKIKFGD 180

Query: 181 VVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPAD 236
           VVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTI+PAD
Sbjct: 181 VVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPAD 232

[Close]
BLAST of Pay0006236 vs. ExPASy TrEMBL
Match: A0A6J1H3V7 (uncharacterized protein LOC111460256 OS=Cucurbita moschata OX=3662 GN=LOC111460256 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.9e-94
Identity = 198/235 (84.26%), Postives = 214/235 (91.06%), Query Frame = 0 

Query: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESE-VSEDL 60
           MGGKG+RRRERNYRAAHGGYDRLPPPP+ SQ DTLPSKLRKLM+FTS R QESE VSED+
Sbjct: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV 60

Query: 61  QRKRKRDAFNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDIDDVQSKSSEKKNKKR 120
           QRKRKR+A +TEKK + K+A G+SD+KSK NGGNSQMPQ TGSD DDVQSK SEKKNKKR
Sbjct: 61  QRKRKREAVDTEKKYHPKEAPGKSDLKSKGNGGNSQMPQLTGSD-DDVQSKFSEKKNKKR 120

Query: 121 KRKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEKIKFGDV 180
           K+KQVTDLRFED  E S+RRLKKRER+KKY EAKKNKHKK KT+E LDFPRHEKIKFGDV
Sbjct: 121 KKKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDV 180

Query: 181 VEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPA 235
           VEAPLKL AVPKAFKSAQVASQERKRLQAI EYRNRKGWTSRPG+QIPSMTI+PA
Sbjct: 181 VEAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPA 234

[Close]
BLAST of Pay0006236 vs. ExPASy TrEMBL
Match: A0A6J1KUZ8 (probable H/ACA ribonucleoprotein complex subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111498941 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 6.0e-92
Identity = 197/236 (83.47%), Postives = 214/236 (90.68%), Query Frame = 0 

Query: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESE-VSEDL 60
           MGGKG+RRRERNYRAAHGGYDRLPPPP+ SQ DTLPSKLRKLMSFTS R QESE VSED+
Sbjct: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMSFTSPRPQESEKVSEDV 60

Query: 61  QRKRKRDAFN-TEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDIDDVQSKSSEKKNKK 120
           QRKRKR+A + TEKK + K+A G+SD+KSK NGGNSQMPQ TGSD DDVQSKS+EKKNKK
Sbjct: 61  QRKRKREAVDTTEKKYHPKEAPGKSDLKSKGNGGNSQMPQLTGSD-DDVQSKSTEKKNKK 120

Query: 121 RKRKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEKIKFGD 180
           RK+KQVTDLRFED  E S+RRLKKRER+KKY EAKKNKHKK  ++E LDFPRHEKIKFGD
Sbjct: 121 RKKKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGISDEDLDFPRHEKIKFGD 180

Query: 181 VVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPA 235
           VVEAPLKL AVPKAFKSAQVASQERKRLQAI EYRNRKGWTSRPG+QIPSMTI+PA
Sbjct: 181 VVEAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPA 235

[Close]
BLAST of Pay0006236 vs. NCBI nr
Match: XP_016902506.1 (PREDICTED: LOW QUALITY PROTEIN: protein PXR1 [Cucumis melo])

HSP 1 Score: 427.2 bits (1097), Expect = 9.4e-116
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0 

Query: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESEVSEDLQ 60
           MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESEVSEDLQ
Sbjct: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESEVSEDLQ 60

Query: 61  RKRKRDAFNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDIDDVQSKSSEKKNKKRK 120
           RKRKRDAFNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDIDDVQSKSSEKKNKKRK
Sbjct: 61  RKRKRDAFNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDIDDVQSKSSEKKNKKRK 120

Query: 121 RKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEKIKFGDVV 180
           RKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHE IKFGDVV
Sbjct: 121 RKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEXIKFGDVV 180

Query: 181 EAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPAD 236
           EAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPAD
Sbjct: 181 EAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPAD 235

[Close]
BLAST of Pay0006236 vs. NCBI nr
Match: KAA0040007.1 (protein PXR1 [Cucumis melo var. makuwa])

HSP 1 Score: 425.6 bits (1093), Expect = 2.7e-115
Identity = 232/235 (98.72%), Postives = 234/235 (99.57%), Query Frame = 0 

Query: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESEVSEDLQ 60
           MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESEVSED+Q
Sbjct: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESEVSEDIQ 60

Query: 61  RKRKRDAFNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDIDDVQSKSSEKKNKKRK 120
           RKRKRDA NTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSD+DDVQSKSSEKKNKKRK
Sbjct: 61  RKRKRDAVNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDVDDVQSKSSEKKNKKRK 120

Query: 121 RKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEKIKFGDVV 180
           RKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEKIKFGDVV
Sbjct: 121 RKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEKIKFGDVV 180

Query: 181 EAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPAD 236
           EAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPAD
Sbjct: 181 EAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPAD 235

[Close]
BLAST of Pay0006236 vs. NCBI nr
Match: XP_004144999.1 (uncharacterized protein LOC101205981 [Cucumis sativus] >XP_011656692.1 uncharacterized protein LOC101205981 [Cucumis sativus] >XP_011656693.1 uncharacterized protein LOC101205981 [Cucumis sativus] >KGN46231.1 hypothetical protein Csa_005112 [Cucumis sativus])

HSP 1 Score: 379.4 bits (973), Expect = 2.2e-101
Identity = 216/237 (91.14%), Postives = 222/237 (93.67%), Query Frame = 0 

Query: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESE-VSEDL 60
           MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQ DTLPSKLRKLMSFTSSRSQE E VSED+
Sbjct: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQPDTLPSKLRKLMSFTSSRSQEPEKVSEDI 60

Query: 61  QRKRKRDAFNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDID-DVQSKSSEKKNKK 120
           QRKRKR+A NT+KKSNQKDASG     SKANGGNSQMPQR GSD D +V SKSSEKKNKK
Sbjct: 61  QRKRKREAVNTDKKSNQKDASG-----SKANGGNSQMPQRMGSDDDNNVHSKSSEKKNKK 120

Query: 121 RKRKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEKIKFGD 180
           RKRKQVTDLRFEDSLEESSRRLKKRER KKYQEAKKNKHKKAKTEE LDFP+HEKIKFGD
Sbjct: 121 RKRKQVTDLRFEDSLEESSRRLKKRERWKKYQEAKKNKHKKAKTEEYLDFPKHEKIKFGD 180

Query: 181 VVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPAD 236
           VVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTI+PAD
Sbjct: 181 VVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPAD 232

[Close]
BLAST of Pay0006236 vs. NCBI nr
Match: XP_038907272.1 (protein PXR1 [Benincasa hispida] >XP_038907273.1 protein PXR1 [Benincasa hispida])

HSP 1 Score: 368.6 bits (945), Expect = 3.9e-98
Identity = 209/235 (88.94%), Postives = 219/235 (93.19%), Query Frame = 0 

Query: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESE-VSEDL 60
           MGGKGMRRRERNYRAAHGGYDRLPPPP+ SQ DTLPSKLRKLMSFTSS  QESE VS+D+
Sbjct: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMSFTSSGPQESEKVSDDI 60

Query: 61  QRKRKRDAFNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDIDDVQSKSSEKKNKKR 120
           QRKRKRDA NTEKKS++KDA GRSDVKSK NG  SQ PQ TGS+ DDVQSKSSEKKNKK+
Sbjct: 61  QRKRKRDAVNTEKKSHRKDALGRSDVKSKGNGETSQKPQLTGSNGDDVQSKSSEKKNKKQ 120

Query: 121 KRKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEKIKFGDV 180
           KRKQVTDLRFEDS EESSRRLKKRERRKKYQEAKKNKHKKA+TEE LDFPRHEKIKFGDV
Sbjct: 121 KRKQVTDLRFEDS-EESSRRLKKRERRKKYQEAKKNKHKKARTEEDLDFPRHEKIKFGDV 180

Query: 181 VEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPA 235
           VEAPLKL+AVPKAFKSAQVASQERKR QAINEYRNRKGWTSRPGIQIPSMTI+PA
Sbjct: 181 VEAPLKLIAVPKAFKSAQVASQERKRSQAINEYRNRKGWTSRPGIQIPSMTISPA 234

[Close]
BLAST of Pay0006236 vs. NCBI nr
Match: XP_022959194.1 (uncharacterized protein LOC111460256 [Cucurbita moschata] >XP_022959195.1 uncharacterized protein LOC111460256 [Cucurbita moschata] >XP_022959196.1 uncharacterized protein LOC111460256 [Cucurbita moschata] >XP_022959197.1 uncharacterized protein LOC111460256 [Cucurbita moschata])

HSP 1 Score: 354.0 bits (907), Expect = 1.0e-93
Identity = 198/235 (84.26%), Postives = 214/235 (91.06%), Query Frame = 0 

Query: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESE-VSEDL 60
           MGGKG+RRRERNYRAAHGGYDRLPPPP+ SQ DTLPSKLRKLM+FTS R QESE VSED+
Sbjct: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV 60

Query: 61  QRKRKRDAFNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDIDDVQSKSSEKKNKKR 120
           QRKRKR+A +TEKK + K+A G+SD+KSK NGGNSQMPQ TGSD DDVQSK SEKKNKKR
Sbjct: 61  QRKRKREAVDTEKKYHPKEAPGKSDLKSKGNGGNSQMPQLTGSD-DDVQSKFSEKKNKKR 120

Query: 121 KRKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEKIKFGDV 180
           K+KQVTDLRFED  E S+RRLKKRER+KKY EAKKNKHKK KT+E LDFPRHEKIKFGDV
Sbjct: 121 KKKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDV 180

Query: 181 VEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPA 235
           VEAPLKL AVPKAFKSAQVASQERKRLQAI EYRNRKGWTSRPG+QIPSMTI+PA
Sbjct: 181 VEAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPA 234

[Close]
BLAST of Pay0006236 vs. TAIR 10
Match: AT2G45520.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 260 Blast hits to 238 proteins in 75 species: Archae - 0; Bacteria - 6; Metazoa - 94; Fungi - 40; Plants - 38; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). )

HSP 1 Score: 177.9 bits (450), Expect = 9.2e-45
Identity = 119/231 (51.52%), Postives = 150/231 (64.94%), Query Frame = 0 

Query: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESEVSEDLQ 60
           MGGKG +RRE+NY AAHGG  RLPPPPD S+ D +PS LR LM++TS    +S       
Sbjct: 1   MGGKGKKRREKNYLAAHGGPARLPPPPDRSKQDDVPSTLRILMNYTSPSPHDS------- 60

Query: 61  RKRKRDAFNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDIDDVQSKSSEKKNKKRK 120
                    T++   +K+   +++V   A          T SD DD      EKK KKRK
Sbjct: 61  ---------TKQVVEKKEKLKKAEVVVPA----------TESDGDD---SVVEKKKKKRK 120

Query: 121 RKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVL--DFPRHEKIKFGD 180
           R Q+TDLRFE+ L E   R K++ER+KKY EAKK K  K KTE+ L  +FP+HE+I+FGD
Sbjct: 121 RNQMTDLRFENELAEIDGRSKRKERKKKYWEAKKQKKNKGKTEDTLRENFPKHEQIRFGD 180

Query: 181 VVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSM 230
           VV+APLKL  VPKA KS   ASQER RLQAI+ YR+RKGWT+RPG+ IP++
Sbjct: 181 VVQAPLKLAVVPKARKSTLSASQERLRLQAIDAYRSRKGWTARPGVPIPAV 202

The following BLAST results are available for this feature:
BLAST of Pay0006236 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0006236 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4E2Q24.5e-11699.57LOW QUALITY PROTEIN: protein PXR1 OS=Cucumis melo OX=3656 GN=LOC103499034 PE=4 S... [more]
A0A5A7TEP71.3e-11598.72Protein PXR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002900 ... [more]
A0A0A0KEN11.1e-10191.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G076790 PE=4 SV=1[more]
A0A6J1H3V74.9e-9484.26uncharacterized protein LOC111460256 OS=Cucurbita moschata OX=3662 GN=LOC1114602... [more]
A0A6J1KUZ86.0e-9283.47probable H/ACA ribonucleoprotein complex subunit 4 OS=Cucurbita maxima OX=3661 G... [more]
BLAST of Pay0006236 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016902506.19.4e-11699.57PREDICTED: LOW QUALITY PROTEIN: protein PXR1 [Cucumis melo][more]
KAA0040007.12.7e-11598.72protein PXR1 [Cucumis melo var. makuwa][more]
XP_004144999.12.2e-10191.14uncharacterized protein LOC101205981 [Cucumis sativus] >XP_011656692.1 uncharact... [more]
XP_038907272.13.9e-9888.94protein PXR1 [Benincasa hispida] >XP_038907273.1 protein PXR1 [Benincasa hispida... [more]
XP_022959194.11.0e-9384.26uncharacterized protein LOC111460256 [Cucurbita moschata] >XP_022959195.1 unchar... [more]
BLAST of Pay0006236 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G45520.19.2e-4551.52unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..164
NoneNo IPR availablePANTHERPTHR37218COILED-COIL PROTEINcoord: 1..231
NoneNo IPR availablePANTHERPTHR37218:SF2COILED-COIL PROTEINcoord: 1..231

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0006236.1Pay0006236.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016874 ligase activity