Pay0006053 (gene) Melon (Payzawat) v1

Overview
NamePay0006053
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionUnknown protein
Locationchr01: 28256272 .. 28257338 (+)
RNA-Seq ExpressionPay0006053
SyntenyPay0006053
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGAAAATCATTCCCAAACGTGGTTTTAATCCTTCAAAATTAATTTTTATGGTTTAAAACTTGTAAAACTAAATGTTAAATTGAATTTGAATGATTCAAGACATTGTAAGATTAAAAAAACTTGTGCTCTTTGAACGTTTAATAGTTACAAATAGACCATGCTAATGCAATGGCTTTCTGGCACAGCAAGACGGAGAGTACAATTGGAGAAGAAAAGGTTGAACATCCTCCAGAAGAATTATTTCTTCTCTACGTTGCCCTCGCTCTTGCTGAACGTAATCCAAGATCTGGGTTTGCTCCAGATACACAGTTTCATTACCGAAACGGTCAGGTTAAGATATTAACTTGAAAGAGCCATAATTAGGCCGAGGATATTTTAGTGTCTTTCAACTGCAACTTAGGACAATTTGGTATCTTTAAACTGCAACTTAGGACATTTTAGTATCTTTAAACTGCAACTTAGGACATTTTAGTATCATTAAACTGCAACTTAGGACATTTTAGTATCATTAAACTGCAACTTCAACACTCTTTTTTTTCTACAGAACTTTCACTGGCCTTGGCATTTGATAGTTCTTTTTTTTGAAAGTAGGTAACACTTCTAATCAGTTTGGAATTCAATCTCCGATCGTCAATTTTCAACGCGGATGCAAGTTCTTTTGGTTGAGTTGATGGTGAAAGCTAGATAAAAATGAGGTTTATAACAGCTAAAGTAAGGAAGGGTTCCAAAAGGCAGTGAGAACCGGTTTGCCCTTTATAGAGAGCATGAGCACAGTAAATGAAGGAGGGGGAGTCGTTTTTCCTTTTCCCTTTCTTTGCAATTGATTCTATGTAAGTTGAATGTTTATGAGGGTTCTAATTGTAATTACTATTTATTTCCATTAATTCACATATTTAATGCATTGACAGAAGTTCTATACTATGGAAATATCTCTCTTTTTTTTTTTTTTTAGTCGACTTGCCATATGGAAAGACTAATGAGGGGATTTACTTCGATTTTAATCTAAGTGGTCTATATATTATGATTGACGTCTATCAACGTTGGCCTTCTATATTACTCATATAA

mRNA sequence

TTTGAAAATCATTCCCAAACGTGGTTTTAATCCTTCAAAATTAATTTTTATGGTTTAAAACTTGTAAAACTAAATGTTAAATTGAATTTGAATGATTCAAGACATTGTAAGATTAAAAAAACTTGTGCTCTTTGAACGTTTAATAGTTACAAATAGACCATGCTAATGCAATGGCTTTCTGGCACAGCAAGACGGAGAGTACAATTGGAGAAGAAAAGGTTGAACATCCTCCAGAAGAATTATTTCTTCTCTACGTTGCCCTCGCTCTTGCTGAACGTAATCCAAGATCTGGGTTTGCTCCAGATACACAGTTTCATTACCGAAACGGTCAGGTAACACTTCTAATCAGTTTGGAATTCAATCTCCGATCGTCAATTTTCAACGCGGATGCAATCGACTTGCCATATGGAAAGACTAATGAGGGGATTTACTTCGATTTTAATCTAAGTGGTCTATATATTATGATTGACGTCTATCAACGTTGGCCTTCTATATTACTCATATAA

Coding sequence (CDS)

ATGGCTTTCTGGCACAGCAAGACGGAGAGTACAATTGGAGAAGAAAAGGTTGAACATCCTCCAGAAGAATTATTTCTTCTCTACGTTGCCCTCGCTCTTGCTGAACGTAATCCAAGATCTGGGTTTGCTCCAGATACACAGTTTCATTACCGAAACGGTCAGGTAACACTTCTAATCAGTTTGGAATTCAATCTCCGATCGTCAATTTTCAACGCGGATGCAATCGACTTGCCATATGGAAAGACTAATGAGGGGATTTACTTCGATTTTAATCTAAGTGGTCTATATATTATGATTGACGTCTATCAACGTTGGCCTTCTATATTACTCATATAA

Protein sequence

MAFWHSKTESTIGEEKVEHPPEELFLLYVALALAERNPRSGFAPDTQFHYRNGQVTLLISLEFNLRSSIFNADAIDLPYGKTNEGIYFDFNLSGLYIMIDVYQRWPSILLI
Homology
[Close]
BLAST of Pay0006053 vs. ExPASy TrEMBL
Match: A0A5D3CCP1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00140 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 7.6e-21
Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 0 

Query: 5   HSKTESTIGEEKVEHPPEELFLLYVALALAERNPRSGFAPDTQFHYRNGQVTLL 59
           +SKTESTIGEEKVEHPPEELFLLYVALALAERNPRSGFAPDTQFHYRNGQV +L
Sbjct: 668 NSKTESTIGEEKVEHPPEELFLLYVALALAERNPRSGFAPDTQFHYRNGQVKIL 721

[Close]
BLAST of Pay0006053 vs. ExPASy TrEMBL
Match: A0A5A7UUM1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00250 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.9e-20
Identity = 50/52 (96.15%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 7   KTESTIGEEKVEHPPEELFLLYVALALAERNPRSGFAPDTQFHYRNGQVTLL 59
           KTESTIGEEKVEHPPEELFLLYVALALAERNPRSGFAPDTQFHYRNGQV +L
Sbjct: 668 KTESTIGEEKVEHPPEELFLLYVALALAERNPRSGFAPDTQFHYRNGQVKIL 719

[Close]
BLAST of Pay0006053 vs. ExPASy TrEMBL
Match: A0A0A0K0Y6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027270 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 4.0e-06
Identity = 43/82 (52.44%), Postives = 46/82 (56.10%), Query Frame = 0 

Query: 7  KTEST-IGEEKVEHPPEELFLLYVALALAERNPR------SGFAPDTQFHYR-------N 66
          KTEST +GEEKVEHP EELFLLY      E NP        GF  +T FH+         
Sbjct: 9  KTESTMVGEEKVEHPLEELFLLY-----PELNPDLGLLQIHGFITETNFHWPWHLIVLFL 68

Query: 67 GQVTLLISLEFNLRSSIFNADA 75
            VTL I LEFNLR SI N DA
Sbjct: 69 KVVTLPIGLEFNLRLSISNLDA 85

[Close]
BLAST of Pay0006053 vs. NCBI nr
Match: TYK08136.1 (uncharacterized protein E5676_scaffold886G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 109.8 bits (273), Expect = 1.6e-20
Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 0 

Query: 5   HSKTESTIGEEKVEHPPEELFLLYVALALAERNPRSGFAPDTQFHYRNGQVTLL 59
           +SKTESTIGEEKVEHPPEELFLLYVALALAERNPRSGFAPDTQFHYRNGQV +L
Sbjct: 668 NSKTESTIGEEKVEHPPEELFLLYVALALAERNPRSGFAPDTQFHYRNGQVKIL 721

[Close]
BLAST of Pay0006053 vs. NCBI nr
Match: KAA0059603.1 (uncharacterized protein E6C27_scaffold54G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 107.8 bits (268), Expect = 5.9e-20
Identity = 50/52 (96.15%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 7   KTESTIGEEKVEHPPEELFLLYVALALAERNPRSGFAPDTQFHYRNGQVTLL 59
           KTESTIGEEKVEHPPEELFLLYVALALAERNPRSGFAPDTQFHYRNGQV +L
Sbjct: 668 KTESTIGEEKVEHPPEELFLLYVALALAERNPRSGFAPDTQFHYRNGQVKIL 719

[Close]
BLAST of Pay0006053 vs. NCBI nr
Match: KGN43360.1 (hypothetical protein Csa_020321 [Cucumis sativus])

HSP 1 Score: 60.8 bits (146), Expect = 8.3e-06
Identity = 43/82 (52.44%), Postives = 46/82 (56.10%), Query Frame = 0 

Query: 7  KTEST-IGEEKVEHPPEELFLLYVALALAERNPR------SGFAPDTQFHYR-------N 66
          KTEST +GEEKVEHP EELFLLY      E NP        GF  +T FH+         
Sbjct: 9  KTESTMVGEEKVEHPLEELFLLY-----PELNPDLGLLQIHGFITETNFHWPWHLIVLFL 68

Query: 67 GQVTLLISLEFNLRSSIFNADA 75
            VTL I LEFNLR SI N DA
Sbjct: 69 KVVTLPIGLEFNLRLSISNLDA 85

The following BLAST results are available for this feature:
BLAST of Pay0006053 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0006053 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CCP17.6e-2194.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UUM12.9e-2096.15Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0K0Y64.0e-0652.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027270 PE=4 SV=1[more]
BLAST of Pay0006053 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK08136.11.6e-2094.44uncharacterized protein E5676_scaffold886G00140 [Cucumis melo var. makuwa][more]
KAA0059603.15.9e-2096.15uncharacterized protein E6C27_scaffold54G00250 [Cucumis melo var. makuwa][more]
KGN43360.18.3e-0652.44hypothetical protein Csa_020321 [Cucumis sativus][more]
BLAST of Pay0006053 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0006053.1Pay0006053.1mRNA