Pay0005060 (gene) Melon (Payzawat) v1

Overview


Name	Pay0005060
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	L10-interacting MYB domain-containing protein-like
Location	chr11: 8545126 .. 8545726 (+)
RNA-Seq Expression	Pay0005060
Synteny	Pay0005060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAGCCAACTAATTGCTAGTGCAGGATATAATTATTCTCATGATCAATTGAAAAATAAGTTTAACAAATTAAGACAAACGTACAAAGACTTCAAAAAGATATTGAGTGATATGACAGGAAATGGTTGGGATCCATTATTAGGTACCGTCAATCTTGAAAAGGAGCAATGGAATGAGCTTTTTAAGGTATAATAGTTGCAGTTTTTTTCAATTTCTAATCATCTTTAGGCGAATAAGAGAGCTAAACAGTTTTCATTTTCTATAGGTGAATAAGAGAGCTAAAAAGTTTAGAAAAAGTGGTTGCCCACATTATGAAAAGCTCATAAGGATTTTTGGAGATACTACTGCAACAGGTGTAAATGCTTGCCCATCAACAAGACTTATTTCAGATTCTGAAGATGAAAATGAAAATGATGTTGCAAGCAACACAAACGTTGGTGTTGAAGAGAATAATAAAGGAAAAAGCAAAAAACGATTTAGAAGAAAGAAAGACGAATTTGGCAGTTTCTTCTCATCATTCTTAGATGTATATGCGGAGAATGCAAAGAGAAAGAATGACATCCTTGAGAAAAGATCTTTTGGTTGTACATCTAGTTAA

mRNA sequence

ATGAGAAGCCAACTAATTGCTAGTGCAGGATATAATTATTCTCATGATCAATTGAAAAATAAGTTTAACAAATTAAGACAAACGTACAAAGACTTCAAAAAGATATTGAGTGATATGACAGGAAATGGTTGGGATCCATTATTAGGTACCGTCAATCTTGAAAAGGAGCAATGGAATGAGCTTTTTAAGGTGAATAAGAGAGCTAAAAAGTTTAGAAAAAGTGGTTGCCCACATTATGAAAAGCTCATAAGGATTTTTGGAGATACTACTGCAACAGGTGTAAATGCTTGCCCATCAACAAGACTTATTTCAGATTCTGAAGATGAAAATGAAAATGATGTTGCAAGCAACACAAACGTTGGTGTTGAAGAGAATAATAAAGGAAAAAGCAAAAAACGATTTAGAAGAAAGAAAGACGAATTTGGCAGTTTCTTCTCATCATTCTTAGATGTATATGCGGAGAATGCAAAGAGAAAGAATGACATCCTTGAGAAAAGATCTTTTGGTTGTACATCTAGTTAA

Coding sequence (CDS)

ATGAGAAGCCAACTAATTGCTAGTGCAGGATATAATTATTCTCATGATCAATTGAAAAATAAGTTTAACAAATTAAGACAAACGTACAAAGACTTCAAAAAGATATTGAGTGATATGACAGGAAATGGTTGGGATCCATTATTAGGTACCGTCAATCTTGAAAAGGAGCAATGGAATGAGCTTTTTAAGGTGAATAAGAGAGCTAAAAAGTTTAGAAAAAGTGGTTGCCCACATTATGAAAAGCTCATAAGGATTTTTGGAGATACTACTGCAACAGGTGTAAATGCTTGCCCATCAACAAGACTTATTTCAGATTCTGAAGATGAAAATGAAAATGATGTTGCAAGCAACACAAACGTTGGTGTTGAAGAGAATAATAAAGGAAAAAGCAAAAAACGATTTAGAAGAAAGAAAGACGAATTTGGCAGTTTCTTCTCATCATTCTTAGATGTATATGCGGAGAATGCAAAGAGAAAGAATGACATCCTTGAGAAAAGATCTTTTGGTTGTACATCTAGTTAA

Protein sequence

MRSQLIASAGYNYSHDQLKNKFNKLRQTYKDFKKILSDMTGNGWDPLLGTVNLEKEQWNELFKVNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSS

Homology

[Close]

BLAST of Pay0005060 vs. ExPASy TrEMBL
Match: A0A1S3CTN1 (uncharacterized protein LOC103504323 OS=Cucumis melo OX=3656 GN=LOC103504323 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.2e-92
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MRSQLIASAGYNYSHDQLKNKFNKLRQTYKDFKKILSDMTGNGWDPLLGTVNLEKEQWNE 60
           MRSQLIASAGYNYSHDQLKNKFNKLRQTYKDFKKILSDMTGNGWDPLLGTVNLEKEQWNE
Sbjct: 1   MRSQLIASAGYNYSHDQLKNKFNKLRQTYKDFKKILSDMTGNGWDPLLGTVNLEKEQWNE 60

Query: 61  LFKVNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNV 120
           LFKVNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNV
Sbjct: 61  LFKVNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNV 120

Query: 121 GVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSS 174
           GVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSS
Sbjct: 121 GVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSS 173

[Close]

BLAST of Pay0005060 vs. ExPASy TrEMBL
Match: A0A5D3BNQ5 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00100 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.8e-69
Identity = 132/135 (97.78%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 39  MTGNGWDPLLGTVNLEKEQWNELFKVNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACP 98
           MTGNGWDPLLGT+NLE+EQWNELFKVNKRAKKFRKSGCPHYEKL+RIFGDTTATGVNACP
Sbjct: 1   MTGNGWDPLLGTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACP 60

Query: 99  STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKR 158
           STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKR
Sbjct: 61  STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKR 120

Query: 159 KNDILEKRSFGCTSS 174
           KNDILEKRSFGCTSS
Sbjct: 121 KNDILEKRSFGCTSS 135

[Close]

BLAST of Pay0005060 vs. ExPASy TrEMBL
Match: A0A5D3C535 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00490 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.0e-68
Identity = 131/135 (97.04%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 39  MTGNGWDPLLGTVNLEKEQWNELFKVNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACP 98
           MTGN WDPLLGT+NLE+EQWNELFKVNKRAKKFRKSGCPHYEKL+RIFGDTTATGVNACP
Sbjct: 1   MTGNCWDPLLGTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACP 60

Query: 99  STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKR 158
           STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKR
Sbjct: 61  STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKR 120

Query: 159 KNDILEKRSFGCTSS 174
           KNDILEKRSFGCTSS
Sbjct: 121 KNDILEKRSFGCTSS 135

[Close]

BLAST of Pay0005060 vs. ExPASy TrEMBL
Match: A0A5A7V5Z1 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00520 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.8e-68
Identity = 130/135 (96.30%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 39  MTGNGWDPLLGTVNLEKEQWNELFKVNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACP 98
           MTGN WDPLLGT+NLE+EQWNELFKVNKRAKKFRKSGCPHYEKL+RIFGDTTATGVNACP
Sbjct: 1   MTGNCWDPLLGTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACP 60

Query: 99  STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKR 158
           STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKD+FGSFFSSFLDVYAENAKR
Sbjct: 61  STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDKFGSFFSSFLDVYAENAKR 120

Query: 159 KNDILEKRSFGCTSS 174
           KNDILEKRSFGCTSS
Sbjct: 121 KNDILEKRSFGCTSS 135

[Close]

BLAST of Pay0005060 vs. ExPASy TrEMBL
Match: A0A5A7VKM6 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G00100 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.2e-67
Identity = 129/135 (95.56%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 39  MTGNGWDPLLGTVNLEKEQWNELFKVNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACP 98
           MTGNGWDPLLGT+NLE+EQWNELFKVNKR KKFRKSGCPHYEKL+RIFGDTTATGVNACP
Sbjct: 1   MTGNGWDPLLGTINLEEEQWNELFKVNKRTKKFRKSGCPHYEKLVRIFGDTTATGVNACP 60

Query: 99  STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKR 158
           STRLIS SEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKR
Sbjct: 61  STRLISYSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKR 120

Query: 159 KNDILEKRSFGCTSS 174
           KN+ILEKRSFGCTSS
Sbjct: 121 KNNILEKRSFGCTSS 135

[Close]

BLAST of Pay0005060 vs. NCBI nr
Match: XP_008466944.1 (PREDICTED: uncharacterized protein LOC103504323 [Cucumis melo])

HSP 1 Score: 349.0 bits (894), Expect = 2.4e-92
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MRSQLIASAGYNYSHDQLKNKFNKLRQTYKDFKKILSDMTGNGWDPLLGTVNLEKEQWNE 60
           MRSQLIASAGYNYSHDQLKNKFNKLRQTYKDFKKILSDMTGNGWDPLLGTVNLEKEQWNE
Sbjct: 1   MRSQLIASAGYNYSHDQLKNKFNKLRQTYKDFKKILSDMTGNGWDPLLGTVNLEKEQWNE 60

Query: 61  LFKVNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNV 120
           LFKVNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNV
Sbjct: 61  LFKVNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNV 120

Query: 121 GVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSS 174
           GVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSS
Sbjct: 121 GVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSS 173

[Close]

BLAST of Pay0005060 vs. NCBI nr
Match: TYJ96795.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK00864.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK19200.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 271.9 bits (694), Expect = 3.7e-69
Identity = 132/135 (97.78%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 39  MTGNGWDPLLGTVNLEKEQWNELFKVNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACP 98
           MTGNGWDPLLGT+NLE+EQWNELFKVNKRAKKFRKSGCPHYEKL+RIFGDTTATGVNACP
Sbjct: 1   MTGNGWDPLLGTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACP 60

Query: 99  STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKR 158
           STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKR
Sbjct: 61  STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKR 120

Query: 159 KNDILEKRSFGCTSS 174
           KNDILEKRSFGCTSS
Sbjct: 121 KNDILEKRSFGCTSS 135

[Close]

BLAST of Pay0005060 vs. NCBI nr
Match: TYK06268.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 268.5 bits (685), Expect = 4.1e-68
Identity = 131/135 (97.04%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 39  MTGNGWDPLLGTVNLEKEQWNELFKVNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACP 98
           MTGN WDPLLGT+NLE+EQWNELFKVNKRAKKFRKSGCPHYEKL+RIFGDTTATGVNACP
Sbjct: 1   MTGNCWDPLLGTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACP 60

Query: 99  STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKR 158
           STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKR
Sbjct: 61  STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKR 120

Query: 159 KNDILEKRSFGCTSS 174
           KNDILEKRSFGCTSS
Sbjct: 121 KNDILEKRSFGCTSS 135

[Close]

BLAST of Pay0005060 vs. NCBI nr
Match: KAA0061221.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 266.9 bits (681), Expect = 1.2e-67
Identity = 130/135 (96.30%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 39  MTGNGWDPLLGTVNLEKEQWNELFKVNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACP 98
           MTGN WDPLLGT+NLE+EQWNELFKVNKRAKKFRKSGCPHYEKL+RIFGDTTATGVNACP
Sbjct: 1   MTGNCWDPLLGTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACP 60

Query: 99  STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKR 158
           STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKD+FGSFFSSFLDVYAENAKR
Sbjct: 61  STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDKFGSFFSSFLDVYAENAKR 120

Query: 159 KNDILEKRSFGCTSS 174
           KNDILEKRSFGCTSS
Sbjct: 121 KNDILEKRSFGCTSS 135

[Close]

BLAST of Pay0005060 vs. NCBI nr
Match: KAA0053615.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 265.0 bits (676), Expect = 4.5e-67
Identity = 128/133 (96.24%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 39  MTGNGWDPLLGTVNLEKEQWNELFKVNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACP 98
           MTGNGWDPLLGT+NLE+EQWNELFKVNKRAKKFRKSGCPHYEKL+RIFGDTTATGVNACP
Sbjct: 1   MTGNGWDPLLGTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACP 60

Query: 99  STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKR 158
           STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEF SFFSSFLDVYAENAKR
Sbjct: 61  STRLISDSEDENENDVASNTNVGVEENNKGKSKKRFRRKKDEFDSFFSSFLDVYAENAKR 120

Query: 159 KNDILEKRSFGCT 172
           KNDILEKRSFGC+
Sbjct: 121 KNDILEKRSFGCS 133

[Close]

BLAST of Pay0005060 vs. TAIR 10
Match: AT2G19220.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 443 Blast hits to 267 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 426; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 1.2e-06
Identity = 24/77 (31.17%), Postives = 41/77 (53.25%), Query Frame = 0


Query: 10  GYNYSHDQLKNKFNKLRQTYKDFKKILSDMTGNGWDPLLGTVNLEKEQWNELFKVNKRAK 69
           G  Y+H QL+N F + R ++K + + ++      WD         +E W++   +NKRA+
Sbjct: 211 GLGYTHKQLENHFTRTRTSWKHWCETIASPIMK-WDANTRKFGATEEDWDKYLMINKRAR 270

Query: 70  KFRKSGCPHYEKLIRIF 87
            F++   PH +KL  IF
Sbjct: 271 VFKRRHIPHADKLATIF 286

The following BLAST results are available for this feature:

BLAST of Pay0005060 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0005060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CTN1	1.2e-92	100.00	uncharacterized protein LOC103504323 OS=Cucumis melo OX=3656 GN=LOC103504323 PE=...	[more]
A0A5D3BNQ5	1.8e-69	97.78	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5D3C535	2.0e-68	97.04	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5A7V5Z1	5.8e-68	96.30	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5A7VKM6	2.2e-67	95.56	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]

BLAST of Pay0005060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466944.1	2.4e-92	100.00	PREDICTED: uncharacterized protein LOC103504323 [Cucumis melo]	[more]
TYJ96795.1	3.7e-69	97.78	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >T...	[more]
TYK06268.1	4.1e-68	97.04	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
KAA0061221.1	1.2e-67	96.30	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
KAA0053615.1	4.5e-67	96.24	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]

BLAST of Pay0005060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19220.1	1.2e-06	31.17	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 15..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..134
None	No IPR available	PANTHER	PTHR47584:SF14	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 2..143
None	No IPR available	PANTHER	PTHR47584	FAMILY NOT NAMED	coord: 2..143
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 2..60 e-value: 1.6E-7 score: 32.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0005060.1	Pay0005060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane