Pay0005017 (gene) Melon (Payzawat) v1

Overview


Name	Pay0005017
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	cytochrome c oxidase subunit 6a, mitochondrial
Location	chr06: 23653394 .. 23655979 (+)
RNA-Seq Expression	Pay0005017
Synteny	Pay0005017

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATGGCGTCGATCCGATCCAATTTTCTTCGCGCCGCCCTACGCGGTGCCTCTCGAAACTCCGTTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGACGCTCGTAAGTCTCTCTCTCTCGCTTAGGTATTTTTTTTTTAATTGCGATGGTATATGCACTCCAACTGATTCACGTCTCTCTCTATTTGCTTGTCTTTATTGACGGATTTTTTTCCTTGTTGCTTTCAGCAACTTTGTTTAGTCCATTATATGTTTTGATTTCATTCATTTTCCCGCCCTGTTTTCATCTGACGAAATGGGGGAAAGAAGGAGGATGTTGATTATTCAATCGTGTTCAAATTTTGTTTCAAACTAATTTGATTAGATGCTTTTCGTTCCTTTTAGATTGAAAGTCTTGCCTTGCAGAAGGAGGTGTTTTTGAAATTTGAACTCAGATTTAAACGTTATTCAATAGTTTTTTAAAATAATCGGATGGGATTATATACATTGTATTTGACAATTAACTGTGCATGGGGTTTCCAGCCGCTGAGAAGCAGATTTGGTTTAAAGCTTAGGAAAGAAGGCAAAGGGGGAATGATCTATTACTGAGTGGCAACACTATGATTGTTGATTTCTATAATTGAGTAAAAAATCTTGGATTTTGTGGTATATTTAATTTACCTCTGATTTCGAGTGAGTAAGGCACGGTGGAAGGGAAACACAAATGCATCTAATTTATTAGAGGGTTAAGACCTTTAGTCAAGGAACTCTTCTCCAGGTTGAAGGGTGAGTTTTTTCACCTATAATCTGATGCTTTCTTTTTTAATTAATTCTTTTCTGGGATGGAGGTCATGAAAGTTTTTCCACCTCTAATCGTATATCTGTTTCTTCTTTCTCTCACTCCTCTCCACATTTCTCTTTCCTTTTCTTCTCTCACACGTTTATCGGTTGTGGGTGGTGGTGGGGGGGGGGGATTTCTTCTTTTTTTGGAGTAGGTAAGTACACTACTGGTGCTAAGCTACTTCAGTATTGTGAATTTATTTTCTAGTAATCCACCATAACATATACTTTTGATGCCTCGTTACATTTGTTGGGTGCATATGTATTGTTAGTTTTAAATACTATTTCATTCTTATATTGTTCAAGCACGTAGGAAGAAAAAATTGAGTGCAAGATTGCTATGTCGCTTGTACTCCTTATGTTTGATCTCTCACCTTCCTTTTTTTTTTTTATGTCAGGTGAAACGGCAAAGTGGGAGAAGATTACTTATGCTGGCATTGTAACCTGCTCTATTTTAGCATTCTATAATTTATCAAAGGGGCACCCCCACCATGAAGAGCCCCCTGTAATCTATAACTTCAGTCAATTTATACTTTTTCCTCCAGTGCTGAGTTCCTAGTTGCATTGTGGAATTCTGTATTGTACTCTCATGTGTTAACCATTTATTTTTGTTTGGGTTTTCACTGTCTGCAGGCATATCCATATTTGCACATTCGCAATAAAGAGTTCCCTTGGGGTAAGTTTCCACTTCATTCAAAGTTATATGACATCTTGTATATCTCTTTGCAATTGCTATTTGGGTTTTATAATATATTTTAAGTCAAAACATATAATTTCCATGAAGTGGTGGTTTTTTATTTTTTATTTTATTTTAATTTGATTTTGGTGCTAGTTGTTTCCTTAAAATGAACTAGTAAAGCATTGCTCTTGTGAATTTAAATTTAGACGTAATGCAGAGTTTCCAATAAAACAGTGATTATGCTCCTTTGCAAACTCAGTCATAATTATTGGTGCGTTTTCTTTATTTGGATTGGACATTGTTGATTGTAATCAGAAAGGAAAGTTGATTAGCAGTCCTTATTTTCTCTGTTTACGTTGCTTGATCACAATGTTAGTAAAATAATGTTGGAATCTGGAAGCTGAACCATCCTATTAGTTTGCCAAGTAAATGTACAGCTATTATGTAACCAATAGATTTACTACTAACTCAGCAGCTAGTAACTAATATGCTTGTAACTACCTCGTTCAGCTTGCTAGCAATCTTTAGATCTAGTTCATTACCTTCTCCTTTCATTAATCCAACTCTAACTTAACTTTGAAACTCTTCAACCCCAAATGTTGAATGGGGTAGTTCAACGGCTTCCTCTGTTGGTTGCTTGATCATCTCAGGGTTTTATGGACACTTCCTGGTTTATTATTATTTATTTTATTTTTTAGGACAAGAAACAATTATGTATTACCCATTAACAAAAGAGACAGCCTAAGGGCAAGGAGTTGAGGGCCTACAAAACTAATAAAGAAGAGTCTTCCAATTGTTAAGAATCATAAGAAGGCTATAATTTCCAAAAAAGAAAAAAATGGTGTAATTTATGCACCACCAAGAGTTTGTATGCTGGACAAAGACCAGAAAGAATCGAAAGAAGCAAACTTATCTTCAAACTTCTTGCTCTTTCTTTCTTTCCAAAGACACCCAAGAAGAGCACGAGTATCACATCTTCAATGGATTTTGCCCACCCACAAAATCTACCACCCTCCAACTCGTCGATCATCCAATCATCAATCATCTTAGGAAGGCTTCCTACCGACCCAAATATTTAG

mRNA sequence

ATGGCAATGGCGTCGATCCGATCCAATTTTCTTCGCGCCGCCCTACGCGGTGCCTCTCGAAACTCCGTTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGACGCTCGTGAAACGGCAAAGTGGGAGAAGATTACTTATGCTGGCATTGTAACCTGCTCTATTTTAGCATTCTATAATTTATCAAAGGGGCACCCCCACCATGAAGAGCCCCCTGCATATCCATATTTGCACATTCGCAATAAAGAGTTCCCTTGGGAAGGCTATAATTTCCAAAAAAGAAAAAAATGGTGTAATTTATGCACCACCAAGAGTTTGTATGCTGGACAAAGACCAGAAAGAATCGAAAGAAGCAAACTTATCTTCAAACTTCTTGCTCTTTCTTTCTTTCCAAAGACACCCAAGAAGAGCACGAGTATCACATCTTCAATGGATTTTGCCCACCCACAAAATCTACCACCCTCCAACTCGTCGATCATCCAATCATCAATCATCTTAGGAAGGCTTCCTACCGACCCAAATATTTAG

Coding sequence (CDS)

ATGGCAATGGCGTCGATCCGATCCAATTTTCTTCGCGCCGCCCTACGCGGTGCCTCTCGAAACTCCGTTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGACGCTCGTGAAACGGCAAAGTGGGAGAAGATTACTTATGCTGGCATTGTAACCTGCTCTATTTTAGCATTCTATAATTTATCAAAGGGGCACCCCCACCATGAAGAGCCCCCTGCATATCCATATTTGCACATTCGCAATAAAGAGTTCCCTTGGGAAGGCTATAATTTCCAAAAAAGAAAAAAATGGTGTAATTTATGCACCACCAAGAGTTTGTATGCTGGACAAAGACCAGAAAGAATCGAAAGAAGCAAACTTATCTTCAAACTTCTTGCTCTTTCTTTCTTTCCAAAGACACCCAAGAAGAGCACGAGTATCACATCTTCAATGGATTTTGCCCACCCACAAAATCTACCACCCTCCAACTCGTCGATCATCCAATCATCAATCATCTTAGGAAGGCTTCCTACCGACCCAAATATTTAG

Protein sequence

MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWEGYNFQKRKKWCNLCTTKSLYAGQRPERIERSKLIFKLLALSFFPKTPKKSTSITSSMDFAHPQNLPPSNSSIIQSSIILGRLPTDPNI

Homology

[Close]

BLAST of Pay0005017 vs. ExPASy Swiss-Prot
Match: Q9T070 (Cytochrome c oxidase subunit 6a, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX6A PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-25
Identity = 58/88 (65.91%), Postives = 66/88 (75.00%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIVTCSILAF 60
          MA A +RS   RA  R A + SV PKR F+SSA HDDA E AKWEKITY GI +C+ LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPW 88
          Y LSKGH H E+PPAYP++HIRNKEFPW
Sbjct: 61 YVLSKGHHHGEDPPAYPHMHIRNKEFPW 88

[Close]

BLAST of Pay0005017 vs. ExPASy TrEMBL
Match: A0A1S3BPM0 (cytochrome c oxidase subunit 6a, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103491837 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.5e-42
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60
          MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY
Sbjct: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPW 88
          NLSKGHPHHEEPPAYPYLHIRNKEFPW
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPW 87

[Close]

BLAST of Pay0005017 vs. ExPASy TrEMBL
Match: A0A0A0L3I0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G115610 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.8e-40
Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 3  MASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNL 62
          MASIRSN LRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNL
Sbjct: 1  MASIRSNLLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNL 60

Query: 63 SKGHPHHEEPPAYPYLHIRNKEFPW 88
          SKGHPHHEEPPAYPY+HIRNKEFPW
Sbjct: 61 SKGHPHHEEPPAYPYMHIRNKEFPW 85

[Close]

BLAST of Pay0005017 vs. ExPASy TrEMBL
Match: A0A6J1ERW3 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111435960 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.4e-39
Identity = 81/87 (93.10%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60
          MAMA+IRSN LRAA RGASRNS QPKRGFASSAHDDARETAKWEKITYAGIV+CSILAFY
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPW 88
          NLSKGHPH+EEPPAYPYLHIRNKEFPW
Sbjct: 61 NLSKGHPHYEEPPAYPYLHIRNKEFPW 87

[Close]

BLAST of Pay0005017 vs. ExPASy TrEMBL
Match: A0A6J1J8L1 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111482732 PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 2.2e-38
Identity = 80/87 (91.95%), Postives = 82/87 (94.25%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60
          MAMA IRSN LRAA RGASRN  QPKRGFASSAHDDARETAKWEKITYAGIV+CSILAFY
Sbjct: 1  MAMAMIRSNLLRAAFRGASRNPAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPW 88
          NLSKGHPH+EEPPAYPYLHIRNKEFPW
Sbjct: 61 NLSKGHPHYEEPPAYPYLHIRNKEFPW 87

[Close]

BLAST of Pay0005017 vs. ExPASy TrEMBL
Match: A0A6J1KMD3 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111495450 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 8.3e-38
Identity = 78/87 (89.66%), Postives = 81/87 (93.10%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60
          MAMA+IRSN LRAA+RGASRNS QPKRGFASSAHDDA ETAKWEKITYAGI  C+ LAFY
Sbjct: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPW 88
          NLSKGHPHHEEPPAYPYLHIRNKEFPW
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPW 87

[Close]

BLAST of Pay0005017 vs. NCBI nr
Match: XP_008450167.1 (PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Cucumis melo])

HSP 1 Score: 181.8 bits (460), Expect = 5.1e-42
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60
          MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY
Sbjct: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPW 88
          NLSKGHPHHEEPPAYPYLHIRNKEFPW
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPW 87

[Close]

BLAST of Pay0005017 vs. NCBI nr
Match: XP_011650608.1 (cytochrome c oxidase subunit 6a, mitochondrial isoform X2 [Cucumis sativus] >KAE8650204.1 hypothetical protein Csa_009645 [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 4.3e-41
Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60
          MAMASIRSN LRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY
Sbjct: 1  MAMASIRSNLLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPW 88
          NLSKGHPHHEEPPAYPY+HIRNKEFPW
Sbjct: 61 NLSKGHPHHEEPPAYPYMHIRNKEFPW 87

[Close]

BLAST of Pay0005017 vs. NCBI nr
Match: XP_038905594.1 (cytochrome c oxidase subunit 6a, mitochondrial [Benincasa hispida])

HSP 1 Score: 174.1 bits (440), Expect = 1.1e-39
Identity = 82/87 (94.25%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60
          MAMASIRSN LRAA+RGASRNS QPKRGFASSAHDDARETAKWEKITYAGI TC+ILAFY
Sbjct: 1  MAMASIRSNLLRAAVRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPW 88
          NLSKGHPHHEEPPAYPYLHIRNKEFPW
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPW 87

[Close]

BLAST of Pay0005017 vs. NCBI nr
Match: XP_023551866.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172.9 bits (437), Expect = 2.4e-39
Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60
          MAMA+IRSN LRAALRGASRNS QPKRGFASSAHDDARETAKWEKITYAGIV+CSILAFY
Sbjct: 1  MAMATIRSNLLRAALRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPW 88
          NLSKGHPH+EEPPAYPYLHIRNKEFPW
Sbjct: 61 NLSKGHPHYEEPPAYPYLHIRNKEFPW 87

[Close]

BLAST of Pay0005017 vs. NCBI nr
Match: KAG7015416.1 (Cytochrome c oxidase subunit 6a, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 171.4 bits (433), Expect = 6.9e-39
Identity = 81/87 (93.10%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60
          MAMA+IRSN LRAA RGASRNS QPKRGFASSAHDDARETAKWEKITYAGIV+CSILAFY
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPW 88
          NLSKGHPH+EEPPAYPYLHIRNKEFPW
Sbjct: 61 NLSKGHPHYEEPPAYPYLHIRNKEFPW 87

[Close]

BLAST of Pay0005017 vs. TAIR 10
Match: AT4G37830.1 (cytochrome c oxidase-related )

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-26
Identity = 58/88 (65.91%), Postives = 66/88 (75.00%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIVTCSILAF 60
          MA A +RS   RA  R A + SV PKR F+SSA HDDA E AKWEKITY GI +C+ LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPW 88
          Y LSKGH H E+PPAYP++HIRNKEFPW
Sbjct: 61 YVLSKGHHHGEDPPAYPHMHIRNKEFPW 88

[Close]

BLAST of Pay0005017 vs. TAIR 10
Match: AT4G37830.2 (cytochrome c oxidase-related )

HSP 1 Score: 91.3 bits (225), Expect = 8.5e-19
Identity = 47/78 (60.26%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIVTCSILAF 60
          MA A +RS   RA  R A + SV PKR F+SSA HDDA E AKWEKITY GI +C+ LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 YNLSKGHPHHEEPPAYPY 78
          Y LSKGH H E+PP +P+
Sbjct: 61 YVLSKGHHHGEDPPEFPW 78

The following BLAST results are available for this feature:

BLAST of Pay0005017 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T070	1.6e-25	65.91	Cytochrome c oxidase subunit 6a, mitochondrial OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Pay0005017 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BPM0	2.5e-42	100.00	cytochrome c oxidase subunit 6a, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0L3I0	1.8e-40	97.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G115610 PE=3 SV=1	[more]
A0A6J1ERW3	3.4e-39	93.10	cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=366...	[more]
A0A6J1J8L1	2.2e-38	91.95	cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1KMD3	8.3e-38	89.66	cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of Pay0005017 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450167.1	5.1e-42	100.00	PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Cucumis melo]	[more]
XP_011650608.1	4.3e-41	97.70	cytochrome c oxidase subunit 6a, mitochondrial isoform X2 [Cucumis sativus] >KAE...	[more]
XP_038905594.1	1.1e-39	94.25	cytochrome c oxidase subunit 6a, mitochondrial [Benincasa hispida]	[more]
XP_023551866.1	2.4e-39	94.25	cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]
KAG7015416.1	6.9e-39	93.10	Cytochrome c oxidase subunit 6a, mitochondrial, partial [Cucurbita argyrosperma ...	[more]

BLAST of Pay0005017 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37830.1	1.1e-26	65.91	cytochrome c oxidase-related	[more]
AT4G37830.2	8.5e-19	60.26	cytochrome c oxidase-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036418	Cytochrome c oxidase, subunit VIa superfamily	GENE3D	4.10.95.10	Cytochrome c oxidase, subunit VIa	coord: 29..100 e-value: 1.9E-13 score: 52.1
IPR036418	Cytochrome c oxidase, subunit VIa superfamily	SUPERFAMILY	81411	Mitochondrial cytochrome c oxidase subunit VIa	coord: 30..87
None	No IPR available	PANTHER	PTHR11504:SF0	CYTOCHROME C OXIDASE SUBUNIT 6A, MITOCHONDRIAL	coord: 1..97
IPR001349	Cytochrome c oxidase, subunit VIa	PANTHER	PTHR11504	CYTOCHROME C OXIDASE POLYPEPTIDE VIA	coord: 1..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0005017.1	Pay0005017.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005751	mitochondrial respiratory chain complex IV
cellular_component	GO:0005743	mitochondrial inner membrane
molecular_function	GO:0004129	cytochrome-c oxidase activity
molecular_function	GO:0030234	enzyme regulator activity