Pay0004542 (gene) Melon (Payzawat) v1

Overview


Name	Pay0004542
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	ribosomal RNA-processing protein 17
Location	chr08: 11654270 .. 11668355 (+)
RNA-Seq Expression	Pay0004542
Synteny	Pay0004542

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCATCAACAAAAAAAAAAGAAAAAAAAAAAGAAAAAACCTAAACACAGTGAGAGAGGGAAAAAACTACACGCAACCGTGGGAACAAACCGAAGCGCCGGAATTTGGAGCTAAAAACGCACGGCGTCGGTCTTCTGTGTAGAGTGCGGAACTCAGGCGGTGTGTCTCAGTTTTGGAGGTTATAGCGGCGGGGTCTTTTGCTCTGTTCCGCGGCAGCGTAGAAGTCGAGTTTGTTATTCTCTTTCAAGAGAGTTTTACACTTACAAGGCGGTGCCATGGTAAAGAACGACGGAGAAGAAGGGGGCGAACTTGCACAACCTCATGCTCGACATATAAAGAAGAGAGCTCTCAAGAACAAAGCACTTTCTGTCTCTTTCAATGAAAAAGACTTGAGGTTTTTCTTCATTAATGGGCTAATTTAGACTTCTGTTTGATTTCTATTACTATCGATTTTCCTTCAGTGGTTAATTCTTGTTTTCTTAGGGACTATGTAACTGGATTTCACAAGAGGAAGAAGAAAAGGAGGAAGGAAGCAGAGAAGCAAAAAGAGGAAGCTATGCGGCGGATGCGCATCGAAGCACGAAAAAAGGTTTGGAAAACTATTCTAATTTTGGGAACCAACTGCTGAAAAATAGATAGCTCTTTTATCTTTTGGAAGACTACTTTTTAGAGTTTATATACGAAGAGGAATCTACACACGAGAGTTGTTTTCTTTGAATAATACGACTAGCATTCGATGAACTTAGGAAAGAGCATGAGGATTCCCTTCTGTAGGCTGTTGATTTCCCAACAGAACTGCTGAACCAATTGGATTCTCAGGGGTATAAGGAGAAGAGAGAACCAAGCACATAATTAATTTTTCGAAAAGTTAATTTTCTTCGGACTATGGATGTCTGTAAATTAAAGGTGCGGGAATTTTTCTAGTACTTTGGAAGTACCGTACTCCCCTTGTTCACACACACTATAAATTTAACTTTATAAATACTATGATTGAACCTGGGTATATTGAATATAAAAGATAATAGAAATACACGATAAACCAAGTGATTCGAGGTACTTGGGCTCTTCTTTCTTGAGATCACACTTAAGCCTATATTGAGATAACTCTTAAGCCCTAGTTCATATGCCAAATATTGCTTATCTTCTCCATTCCCGTCTCCCTCTATTTTTTTTTATAAGAAACAAATTTCATTAATGTATAAATTTTGTAAAAATGGTCGAGGCCGAAGCCAATGGAGTTACATAATAGCTCTACAATTTGTCAATAGGGAAGAAAGGGTGTATGATTTAAAGAAAGATGCGCTTTTACACCAACTTACAGGATGATAGATAATGACGTCAAATTAACTATCAAAAGAGCTTCCCTTATCGTTGAAGAGGGGGTTGTTTCTCTCCTTCCAAGTGGTCCATAAGAAAGCACGAATTATATGCATCCACATGTGTTGCTTTTGTTTAGTGAAGGTGTGTCCGGTGAGAGCATATGAGAGAGCAGCAATGGTGTCATTTGGGAGGGTTGTGTACCATCCGAAGGAAAGGGAGATTTCCTTCCAAAACCTCACATTTTATTTGGAAGACTTGCACTTATATGAATTATTCAATTCTTAGTTGCAGAGGTCACATTGTATTTGGAAGATTTGTTCTAATCTCTCTGACAATTACAAAAGGCCTTAGCCATTGAGGCTCATTACTAAGCATTGGACCAAATAACTTGCCACAACTCTCCCTTATATCTCTCAACACCTCCATGTCGTCTACCATCTTACTCAAGCCACGTCGCGTATTCTTTCATTTTCTTTCTGAATGTAAAATTTTGTTTTCATTAGAAAAAATCATGTATCCTTCAAATAAAATGCTACAAATTAGTCATTATGTATGCGTTGTATTTTATGAAGACTTTTATAGCATAAACTGTGTGAAATATTATTGATTAGAGGAAACGAGGAAGGGAACAACCTTTGGTGCAGCTATCTTTTTCTTCTATAACATCTGGGGCACATTCTCTGAAAGTTTCAAATTATCTTGCAGAGAAAATTAGAAAAGGATCTCGTGCTATATGGTGGTGTTCTACCAGCTGACCGGGCAGTTGATGATCAGAATGATGATCAAGAGGATGAGGAAGAGGAGCCATTAGCACCATTTTCTGGTAATTTTACTAATGATTGCATTGCACTCTAAAATATTAAGCGCATGTGATACGCCATCTGTGCTAGCTTTGCTTAAAACACAAGTATGTTCAATTAATAAAAATTGCATATAATAGTTACAAGTTTTTCTCTTGCACAAGGAAAAACGAAGTATTCATCTTTAAGAACCAGATCATAAATTATTTTTGCTCACAGAGAAGCTAAAAGTCAGTTATATATGAAAAATAAGTAGGCAAGTTGATTACATTGACAATGATATGCATTCTTTTAGAAAAATAATAGTGTTCATTTGTATTAGCTCGAAATATGTTTCAATAGTTAACCTCAAAATGCTAAGAAACATGGATACGGATATGAGTCATGAATACGACACGATATGGATACAGTGACATGCTAAGAAGCAAGGACACTTTAGTTTGGCTAACATGTGTGTGTTGTACTCGTGTCAGACATTTGGATGTTCCAGCACTTGGTGGACACCTATCGAACACTTGTTAGTGCTACAAATGCATTTGATATGCATAGAACACTCGTTGAGTAGACTATAAAGAAACTTATATGACAATAATAACAACTTTTGATTGTGGAATACATCAAGCTAAGTTTTTTAAGCATATAAATGTATCAATTCATTTACTAAGAATTTTCTTCTACTATAAAAATGATATATATTTTTAAAAATGAATATTTTAATAAACTTGTCATTTCCATGTTATGTCGTATATTTTTTAAAAATGGTGTGTTGCTGTGTCCATGTCGTATTGTATCTGTGTTTGTGGTTCTTAGGTGACTTATAGACCACCAATTTTACATCATTATGTTCGTAGAGGAAAAAAAGGGAAAGGCATTGGTTACTAATGAGTAGGGTGAGTCATCCAATGGCTAGGATGATCATCTAGGGTAGTTTCTGGTGGTTAGATGTTGGTTATACAAGGAGTTATAATACAGTTAACTGTTATTAAATTATGTGTTTAAATAAGAAGTTGTTCAGTATAGAAGGGTACGTAATCTTTGAGTTAGAAGTGTGTGGGTTTCTCTCACGGAGAGGAAAAGTTTATGTACTAGTCAAATACCATATAATAAAGGAAGGTTGTTTCCTTATCATATTGGTATCAGAGCCCTCAAATTGGGGAAAATCTAGAAGATGGCACAAAAGAAGTTTGATGGACAATTGGAAGCAACCTATCAGAAATTGTGAGCGTGGAAATTGCTCACATGATCATGATCATGATCGTAACAATTGGAAGCAACCTATCAGAAATTTCTCTCATGATCATGATCGTAACAAAGGAAATTGCTCACGTTCGTTTTGACGATCAGAAATTGCCACGAATCGAGGAAACATTATTGTCTCTTGTCAGAAGTGTTGACAAGTTAATGGTGCAGTCCAAACAAGGAAAAAATGAAAATGATATACGTACATTGGCTTCTTTGGTTTTAGGTGTTGCGGCTAGAGATCAGCCCTATACGTTGGTGGCTCATGATTCAGGCGTGGTGAGTGTAGATGGTGATCATGATCGTAACAAATTTAAAACAGTTGAAATGCCAATTTTTAATGGAGTGGATCTAGATTCTTGGTTATTTCAAGCAGATCGATACTTTCAAATCCATAAGCTTACACATTCAGAGCAATTGACTGTGGCAGTCATAGTTTTGAAGCAGCAACACTTGATTGGTATCGAGTAACAGATGAACGTGAACTGTTTTTGAATTGGAATGATTTGAAATGCTGGTTGTTGGGACGTATTTGTTCTTCACGTCAAGGTTCAGTTTGTAGTCAATTCTTGGAAATCAAACAGCAAACAACAATGGAAGAATTCTGTAACCATTTTGATTGAATGATAGCTCCTTTGTCCTAATTACCGGTGGAAGTTCTAGAGAATACTTTTTTAAATAGGCTTATTTACATGGATTTGAGCTGAAGTTGATTGTGGGGAGCCCATGGGCCTGTCTAATACCATGAAAGTTAACTTGAGTTGAGTCTGTGTTCGAGCTTCCTTCTCGATAAGTCACAGATGCATGACAATTCAACATTCCATGCGGCATCATGGAGTGACGACAAATAACAAGCTTCCTTCTTGTTAAAGGATATGCTGGAGAAAAACACCCATACTCTCTCTCTCAATGTTGGTGGAAAATACCCATGCTAGAGTAACCGAAGTAGACTGGAAGGGCTTATCAATGACATTCCTACATCACGGCAAGAAACTAAATATCAAGGTTGATCCAAGCCTCACTAAATGTCGAGTGAGCCTAAAAAACATGATCAAGACATAGGGAGAATCTGATCAAGGATTCTAAGTTGTGTGTAGAGCAATAGAGTTTGGAGGAATGACAATGGCCGAATTCTATGGAGTTGATGAAGTTTACACTATAGAAGAATCTATCCTCGTCGTACTAGATAAGTTTGCGGATGTTTTTAACTGGCCTGAGAAGCTACCCGCAAGAAGAAGCATTGAGCATCACATTCACTTAAAAAAGGATACTAATCCTATTAACGTGAGGCCATCTCGATATGCTTACCAACAGAAAGAAGAAATGGATAAACGAGTAGGAGAGATGCTATCTTCTGGAGTAATAAGGCCAAGCATCAGTCCTTATTCAAGCCTAGTGTTATTGGTCAAAAAGAAAGATGGGAGCTGGTGCTTTGTATGGATTACAGAGCACTAAATAATGTGACTATACTAGACAAATTTTCCATATCTTTCATTCAAGAGTTATTCGACGAATTGAATGGAGCATACAAATTGAGATTTAAAAGCCAGTTATCACCAAATACGCATGAGTGAGAATGATATAGAGAAAACAGCATTCCGAACACATGAAGGGCACTATGAGTTCTTAGTTATGCTGTTTGGGCTAACTAATGCACCAGCCACGTTTTAGTCCTTAATGAACGCGATATTCCGGCCACTTGAGGAAGCTTGTGTTAGTCTTTTTTGATGACATACTGATCTATAGTAAGAGCCTAAAAGAACACTTGAAGCATCCGAAAATAGTGTTAACAATGTTGAGGGAGCATGAGCTCTATGAGAATAAGAAGAAATGTAGTTTTGCAAAGTCAAGAGTAGAGTACTTGGGGCACGTAATCTCAAGGAAAGGAGTTGAAGTGGACCCCGAGAAGATCAGATCTATTGTTGAATGGCCAAGTCCTACTAATGTTAAAGAGGTGCGTGGATTTTTGGGATTGACTGGCTACTATAGAAGGTTTGTGCATCAGTATGGCTCTATGGCTGCACCATTAACACAACTGCTGAAAAATGGGGCATTCAAATGGACAATAGAAACTGAAGAAGCATTTGTGAAACTAAAGAATGCCATGATGACTCTTCCGATGTTAGCTTTACCTGACTTCAGCTTGCCTTTCGAGATTGAAACTGATGCTTCAGGCTATGGCATAGGGGCAGTGCTAATTCAAGCTAAACATCCAATTGCCTATTACAACCATACATTGGCATTGAGAGATAGAGCACGAAAGGGAATTAATGGCTGTTATGTTTGCAGTACAGAGATGGAGATCTTACGTGTTGGGAGCTAAGTTCATAGTGAAGACAGATCAAAAGTCTTTAAAATTCCTACTAGACCAGAGAGTAATTCAGCCCTAATATCAGAAATGGATAGCCAAATTGCTGGGATATTCATTTGAAGTAGTGTATAAGCTAGGGTTGGAACATAAGGTTGCAGATGCTCTTTTGAGAATGCCACCAACCGTGCACTTGTATAATTTATTTGCACCAACTATAATCGACTTGAAGGTGATCAAAGAAGAGGTAGAGAGAGATAGCAAGCTGCAGAATGCGATAGCTGAACTGAATGATCAAGAAGAACCCGTGGAAGGAAAATTTTCACTATAGCAAGGGATGTTGAGGTACAAGAATAGGTTGGTAATTTCTAAATCCTCAACTTTAATCCCTACCATACTTCATACTTATCATGACTCATTATTTGGAGGCCATTCAGAGTTCTTAAGAACCTATAAGAGGTTGACGGGAGAACTTTACTGGGAAGGGATGAAGCAGGATGTGAAAAAAATACTGTAAGGAGTGCTTAGTTTGCCAACGTAACAAATCCTTAGCCTTATCCCCTGCTGAATTATTGCTTCCTCTTGAAATTCTTAATTAAGGGTGAAGTCACATTTCCATGGATTTTGTGGAAGGATTACCAGAGGCCAATGGGTTTGAAGTCATCTTTGTAGTGATGGATTGCCTCAGTAAGTATGGGCATTTCATAGCACTGAAACACCCTTACACTGCCAAAACAATAGCAAATCTATTTGTTAAGAAGATCGTGAGACTACATGGCTTTCCTATAGTCTCTGTCAGGGACAAGGTTTTCCTCAGCAACTTCTGAAGAGAATTATACAAGCTGGCAGGAACTAAATTGAATCGAAGTTCAACTTACCATCCACAGTCAGATGGACAAACTGAGGTTGTGAACCGTGGGGTGGAATATTACTTATGTTGCTTCAGTAGTGAAAGGCCAAAGGAGTGGGTGAGATGGTTACCTTGGGCAGAGTATTGGTACTATACCACGTACCAGAGAGCTCAGTGTTGGATGAGCTACTTAAGGAGAGAGATGTGGCCTTACGAGCTTTGAGAGAACATTTGCGAATCGCACAAGAAAAGATGAAGAAATACGTTGACATGAAAAGAATAGATGTAGAGTTTCAAATTGTGGATATGGTATTTTTCAAGATAAGGCCTTATAGGCAAGTATGCTCGAGGAAGAAGGGGAATGAGAAGCTTTCCCCTTAGTTCTTTGGTCCTTACAAAATTATTGAGAAAATAGGACCAGTGGTCTACAAACTGGAATTACCTAGCACCACATCTATTCACCCAGTTTTTCATGTATCACAGTTGAAGAAGATGTTGGGAGAACATGTTGATGTCCAACCTACTACTCAGTACTTAACAGAAAACCATGAGTGGAAGGCAGTTCCTAATGAAGTATACGACTATCAATAGAATAAGGTAGGGAACTGGGAAGTGTTGTTGAGTTGGGAAGGTCTACCGAGGCATGAAGCTACATGGGAAAGCTATGAGGAAATTCAGCTGTTGTATCCAAATTTTCACCTTGAGGACAAGGTGAATTTGGAGAGGAAGAGTAATGATAGACCTCCAATCATGCTACAATATAGTAGAAAAGGGAAGAAGAGCACTGCACGTGTGAAAGGAGATGAGAAGACTGAAGTTGTTATTAGTTAGTTAATAATAAGCTTAGTAGACATAAGTATAAATAGCAGTTAGCATTTTAGAAAGTTTGTTAGGCTCTGTTCATCCTTGCAAGATAGGATAACAAGAGAAAGTAGCCCTAATACATTGAATTGAGTTTCTCTCAATTAATTACTTTGTAATTCATCAATAAAATTCTACTTCAATTCATCATTATCGGATCCCATCAGAACGATGATCCTAGTAAATATTGCCTCTAGGCCTTCAGACAATGAATCACAAAAAGCATTTCTTTCTCGGAGACAATATACCACCTCTCAACACTATTAAGCTTATGACTCCTGTAATCTATTGGGTGACCCTCTTGGGTAAGGATGCCCCCAAGGGAAAAGTCTAACACGTCGATCTCAACTACAAACGACTTAGAACACGTTAACCAATTTGAGGACAGGACCCCTCATCATTGTTACCTTTAATTCGTCAAAAGCAGTTTGACATTCGAATGGCCATCTCCAAGTTGTACCTTTCTTCAACAACTCTGTCAATTGGGCAACCCTTCTTGAGAATCCTTCAATGAACCGACATAGTAATTAGCCAATCCAAGGAAGGAACGTAACTCTGTCACGGAAGTGGAGGCTCTCCACTCCTTAATAACTCGCAACTTATCTTCGTCCATTCATGTCACACCCTGTCCTGCATGCGACCCAACTCGCCATGTGAGATGCGGTGTGACTTTGAGATTCTCTGACGCGTTAAACGTCAAATAAACTCAGCTTGAGGTCCTTAAGCTTTTCTTAATCGCCTAATAGTTTTTCCTTGACTTAACTTGTAACTTAAAAATAAACCTTAGGCGATATATAATCTTAACACAATCATAAGTAACCATACTCAACTTTTATACTTAAGTCATTTGTTTACAACACTTTACAACAATACATAAAACAACACTTAAACTTTAAAACAAAACGTCTGGTAGCTCTTCTCGCCTAGTTAGCTTTTCACCCTTTCCTTACTTTAGCCTTAATGCCGGTAACCTGGGAAGTAAAACTTAAAAACATAAGTCAAAAGACTTAGTGAGGTTTTGAGAAATCCTTTTCGCAGATTGCCTTTCATAAACATCATTATTCCAATCAAACCGCTTAAACATATCTTTTCACATAGACAAATCAATTTGCACAAACATACATTTCACAAAAACACACATTAGTCAACGATCATTCCTTTCGCCAAGAACCTGAATCATTCATTATGCAAAGATTCATCATCTCGTGTTTAGACTACTAAGGTGGCTTTTTCATCAATAGGATTCGAGAATATCCTGATTCATTCCTTGTTGTTCAGGCCGAAGCGCAATACACATCTTTTATGTATTGTCTCGCCAAATTTCACCATGCATGCCTTTATACATGGTTGCCTTTACTCTTTATGTGCACGTAACAGTTAGCTCATTAATAGGAAGAAAACTAATGGTTTGAACACCATTTCATAGTCATTGGAAATACATAAATCATTCTTTGATCATAGTATAAACTTTGATTTGAAATACCATTTGGAAACATTCATAGATCAAACATTATTTCAAATCAGTAAAAGCTTGAAAAGAAATCTTATACTATCCGAACATGGTAATAGCCTGACCGGAGGTTGAGCTTCGTAAAGTACTGAGCTCCATTCAATTGGTCAAACAAATCATTTATGATCGGGAGGGGATATTTGTTTCGAACTGTGACCTTGTTTAAAGCTCTGTAGTCTACACAGTTGGAGTGTTCTGTCTTTCTTCTTCTGAAACGACATAGGGGTGCCATAGGCGCTTTCGCAGGTCTGATAAATTCGGAGCCAACAGTTTGTCTAATTGTTTCCAGAATTCAGCTAACTCAGGTGGAACCATTTGGTAAGCATTCTTTGTTGGAGGCTTGGTTCCTGGGACAAGCTCAATCTTGTGATCAATCCCCCGTCGAGGAGGCAGTGACTTTGGCAGTTCAGGTGGCATTATATCAACATATTCATTCAAAACTTTCTGGACTGGGACAGTCCCAGGTCCATTTGTTCATCCACCAAAGGGATGGCCATAGAGGTCGGCTCTTCTCTATTGAGCCCCTTTTTCAACTGCAGGGTTGAAATCCACCTCACTCGGTTGCTTGATTTTTGCTTGGACTATTGTCGAATTACTGCTCGTTACTACCATACACTGAAATTATAAGTTGCACTTGAGTCTACCATGGTGCTTTTTGCGGGTTTGGAGTTTATGACCGCATCGACAAACATGAGTCCCTTTTCGAAAGCATCCTTTTGGTAAGATGCCTTCTTTTGAATTGCTGATAAGATTTTTAACACACCCATTTGAGGGGCATCTTCCCTTTCCATTTCTGTTTCTACCTCCAAATTGTTATAACACTGTAAGGAGGCTTGCAAAGCTGTCAACGAGCCTCGGTGTGGGCATTCGGCTATACGATGGGGGACCTTCACACAAGAAGCAAGAAATAGGTCTTGTCTGATTCGAATTTAACTGATATGCTCCTTGAGGAGTACTAAAGCTTGAGGTATGTTGTTTCTTATCGTTCGTGAAGTTCCTTGGTGAATTAGGCTTGGAGATCCTATTCTTGGGTCAGTGTGGTCACTCTTCTTGTGGGACCCTCGGTCGCCATCGTAGTCAAACAATCTCTTTGTAGCAGCAAGAGTAGAGACAAGGTCTTGAACTTTCTGTTCATATAACTTAGTCTTGGCCCACAGCCCACTGCTTGAGCCATTCTATAAAGTAGAATACTTTATCTTTTTCCGACATGTCTCGAATGTCCAACATAACATCGGAGAACTGTTTGGCATACTCTATGATGGTCCTCGTGTGTTTAAGTTCCTGTAGTTTTCTTCTAGCAATAAATTCTACATTTTCAAGGAAGAATCGTGCCCTTAGTTCTTTCTTAAGGTCTTCCCACGTCTCAATGATACATCGACCATTTTGGACGTCGGTCATTTTCGACCTCTACCAGAGTTTTGCATCATCAAACACATGGGGGCTAATATCATCTTAGTTTCTTCAGAGTTGGTTCCACTGGCCTTAAAGTACTCTTTCATATCAAAGATGAAAATTTCAAGCTCTTTAGCATTGCGGTTCCCATTGAAGGGTTTGAGTTCTGGGATCTTAAACTTGCTCGAAACACTATATGCTTGATTCAGGGTTTGGTTCCCCACTCTTGTCGTTAAATTTACTTTCTCTTTCATCTCGACCTTGATTGTCTCTATTGTTGTTCTAAAGTCGTTTGACAGATCGATGAACAACTTTAGCATGGTCTTCTAGGAACAGTTAAGCTCCTCGATACGCTCTTCCATGTGTGCTAAGAACTTGAAGAGCTACTCCCACATTCGAAACTACCTGCTCAGGCAGTTTTATATTCTAACGAATTAACCCTCAGCGTCAATTCATTTATGAGTAGTTTGTCTACTCGGACGTTCAATGCGTCTATTTCTCCGACCTTTTTTCCAACCCCTCTAGCCGGGCATGGAGAAATCTTACTTTGTTTGGCAATTCTCTCAATACAAGAATTGCTCTTCAATCTTAGTCAATTGCTCAAACTACGACTTCGACAGTTGTTTCATTGCCGATGTAATTGCGTCTAGCTTAGCCTATTTCATTGCTAACAAAGCTTTGGTACCACTTGTCACAATCGCAACTTTTCAAACGCGGGACGGGGGATGTGCAGCACTTGTTTTAACTCGGTGAACAAGTTAGTCGTATGAAATCCGAAACTCATTGTACGATGTAGCCTTCCTTCACGTTTTGAGAGAAATTGGTTTTATAAAACGTGAGAGAAAGAAAAGCATTGAAAACATCGTTAAAGAAAGCATTGAAAACTGTCAATTGCAAAGAAAGCTTAGATTGCAAAAAGTACAATAAAGCTTGGTTAGGATTTAACTACTATATTTTCCATATAGTACATTCTAAACATTTTTAGCTTTGATAGACTTGCATATGAAAATGTCGAAACGTCACTTTCTAGGTCGGTGACAACAAAAGGAAAGCAATAGATTAAACTAAGTACAAAACATAAAGATAAGGTGGTTTGTGGATGTTCGGGCATGCGGCTATAAGCAAACAACGCCTTGAACAAGCATGCTCGTGACATTTAGCACCCCATGTTTTAAATCGGCCATTTTAGTTAATGGGTTCCAAGATAGGTTTATAAGGTTACTCTATTAAAAGGTAACTATAGATTTGAACAAAAAATTGATTAGATGCTGAATTTGCAAGATAAGTCGGAAAAAAGCTTATTTTTTATTTTTTCTCTCTCCATTTTCGTCCTCCCACTTTCTTCCTCCCTAATCCTCATCTCTTTTATTCTCTCCCTACCCCTCATAGCGTATCTCCCAGAACAAAACTGAGGAAAAAAACAACATTTTTTTCTTTCTTCTCTCATAACCTATCCTCTCTCACCGTGGCTGAATGTAAGCCCACACCTCCGTCTAAGGAATATTTTTTTTGGCGATCAATACCGTTTCATATCTTCGCATGTTCATGAAATCCAGATGGAACTATAAAAAGAATACACATTCCAAATCTTCAATTTTGAATATTTCCTACAGGTTCCTGCAGGTGGGCATTTCGTGCTTCTTTTTCCACACACATCCATCTAATTTTGAAATATTCTCCTTGGAGTCACTTGACCAAGATAATTCATTTTCAAAGAAGGGGGCATATGACTATGATTTTCACATATTCCCACTCTAAATTACCATCTACAGAATCTAAACCATCTGTTTTTCATCTCTGTAGGAGATAATTGGTATAAGTTGGGGCTATATTATTCGAAAAAGTTTCTGTAAGGCCTTGGCCACAATTATATTTATCAACTGTTGGAGAAGGATTTGATGGCTCCCCAATCTCTCCACACTTATCTAATAAGAATTCTATACCAAAATCATTAAGGAAAAAGATACCCTTGCCCTACCTTACTCGATTTAAAAAATCGACAAATACTAAAGGAAATAACAGTATACTTGGCCCACTCTAACAAACACATTCCTAAGGCCCACACTATTGAAAACTACCAACTAACTCTCAATCATTCTTTCTTCTTTCCTATCTTGTCTCTGTATACACCTTTACTATAGGGGTCTATCAGTTTCTCTCATTGGACACTAGATTAAATTCGAATCGAGTTTGATTGTTGTTGTAGGAGAGTTGTTGTAAGAACTCAAACCCACCGTCTTGGCCAGTTCCTACTGTTCTAGAAGACGTCTTCCCTGAGCAAGATTGATAACTGGTTAGCATTGTTGGGATGCATTGTGAGAGAAAGCTCCAAATTGAGAAGAATTTCAGTATGTCCAGGATTTTGAGACCAGGTGGATTTAGTTTTTTGATTGATTCAAATTTTCATTCTATGAAGGAGGGAGGAGAGAATGAGAGATAAGGATTAGGGAGGGAGAATGAGAGAGAGGGAGGAGAGAATGAGAGATAAGGATTAGGGAGAGATAAGGATTAGGGAGGGAGAAGGAGGGAGGATGGACAAGGGGAGAGAGAATAATCTTCTAAAACCTATCATGAGAACTTAGAGACTAAAATTGATAAATGGCTAAGAGGTTAGGAATCAATACATGATGGTCACCTAGGGAACTAATTTCTTACAGATTTTCTTGGCACCCAAATGTTGTAAGGTCAGATAGGTTATTTCATGAGATTAGTCGAGGTACACGCAAGTTGGTCTGGATGCTCACAGTTATAAAAAAAAATTGTCAACTTAACCTGAGGGACTAATGCACCTATTCTTCAGAAGGTAGGGACCAAAACCTGTATTTTTCTCTAAATTTGATTATTTCTATTTATTGTACTTTAACAAGTGTTTGATGTGTGTCTACCAAGTTGGTCTTATTTCTTTACTTTGTGCAACTAGTGTCTAAAAACATATTTATTGTACCAACAAGTGTCCAATACATATCTCACGAATGGCAGTGTCCAAGTGTCTTGACATGCTAGCCAAGTTAAAGTGTCTGTACTTCTTAGACTTAAAGTATGAGTGTCATCTTCGATCTGAACATGCCTTTGATTCTTTGTAGAGGCAAGAACGTATGACAACGGAAATGTCAAAGTAACTGTGACAACAAGTGAGGTATCTCGGGAGGGCGAAATTGATCCAATTGACAAGCCACAGACAGCAATAGCTCAGTTGCTTGGAAAGGATAAGAAGCATAACCTGCCAATTACCAAAAAGAAGCTATTCAAGAAAGTAGCAAAACAGAGGTCAAGGCCAAAGCTTCGAAGTAAAAGAGACAAAAAGAAAGGAAGGAAAAAGAAATAGATAATTATACTAAGCTTCTTACTTACTATTTGCTAAATGTTCAATGCGATACGATTTATTTGTTTTCTAATGAGAATACGGAGTGATCTTGAGCATTGGGTGTCTTTGAGGGTTTTGTATTATTACATTATAAAAGCTTACCCGTTTTGCAAACTGAAAGTGCAATTTTTCTTTTTATGTGCAGCTCAATTTGTTTTCATTCAGCATTCCTAGAAGAAAAAACAACAGATCATCTATGTATAGAAAAATTATCGTATTGCTTTACAAGAATGTACACGTTTGATGATTTATATATGTTTGGAATAACTAATTAGTTTTCTTTAGCCTCAAATTTCAATTCTTATGGTAAACGGGATATTAGTGTGTGTATCTAGTCATAAAGTTCACCATTTGGTGAAGATTTAGTTGGTTGAAGAATCTAGATCTACTTTCACATTTCAAGAATGTGACAAATGAGATTCCTCGTCCTCCTTCCTCAAT

mRNA sequence

ATTTCATCAACAAAAAAAAAAGAAAAAAAAAAAGAAAAAACCTAAACACAGTGAGAGAGGGAAAAAACTACACGCAACCGTGGGAACAAACCGAAGCGCCGGAATTTGGAGCTAAAAACGCACGGCGTCGGTCTTCTGTGTAGAGTGCGGAACTCAGGCGGTGTGTCTCAGTTTTGGAGGTTATAGCGGCGGGGTCTTTTGCTCTGTTCCGCGGCAGCGTAGAAGTCGAGTTTGTTATTCTCTTTCAAGAGAGTTTTACACTTACAAGGCGGTGCCATGGTAAAGAACGACGGAGAAGAAGGGGGCGAACTTGCACAACCTCATGCTCGACATATAAAGAAGAGAGCTCTCAAGAACAAAGCACTTTCTGTCTCTTTCAATGAAAAAGACTTGAGGGACTATGTAACTGGATTTCACAAGAGGAAGAAGAAAAGGAGGAAGGAAGCAGAGAAGCAAAAAGAGGAAGCTATGCGGCGGATGCGCATCGAAGCACGAAAAAAGAGAAAATTAGAAAAGGATCTCGTGCTATATGGTGGTGTTCTACCAGCTGACCGGGCAGTTGATGATCAGAATGATGATCAAGAGGATGAGGAAGAGGAGCCATTAGCACCATTTTCTGAGGCAAGAACGTATGACAACGGAAATGTCAAAGTAACTGTGACAACAAGTGAGGTATCTCGGGAGGGCGAAATTGATCCAATTGACAAGCCACAGACAGCAATAGCTCAGTTGCTTGGAAAGGATAAGAAGCATAACCTGCCAATTACCAAAAAGAAGCTATTCAAGAAAGTAGCAAAACAGAGGTCAAGGCCAAAGCTTCGAAGTAAAAGAGACAAAAAGAAAGGAAGGAAAAAGAAATAGATAATTATACTAAGCTTCTTACTTACTATTTGCTAAATGTTCAATGCGATACGATTTATTTGTTTTCTAATGAGAATACGGAGTGATCTTGAGCATTGGGTGTCTTTGAGGGTTTTGTATTATTACATTATAAAAGCTTACCCGTTTTGCAAACTGAAAGTGCAATTTTTCTTTTTATGTGCAGCTCAATTTGTTTTCATTCAGCATTCCTAGAAGAAAAAACAACAGATCATCTATGTATAGAAAAATTATCGTATTGCTTTACAAGAATGTACACGTTTGATGATTTATATATGTTTGGAATAACTAATTAGTTTTCTTTAGCCTCAAATTTCAATTCTTATGGTAAACGGGATATTAGTGTGTGTATCTAGTCATAAAGTTCACCATTTGGTGAAGATTTAGTTGGTTGAAGAATCTAGATCTACTTTCACATTTCAAGAATGTGACAAATGAGATTCCTCGTCCTCCTTCCTCAAT

Coding sequence (CDS)

ATGGTAAAGAACGACGGAGAAGAAGGGGGCGAACTTGCACAACCTCATGCTCGACATATAAAGAAGAGAGCTCTCAAGAACAAAGCACTTTCTGTCTCTTTCAATGAAAAAGACTTGAGGGACTATGTAACTGGATTTCACAAGAGGAAGAAGAAAAGGAGGAAGGAAGCAGAGAAGCAAAAAGAGGAAGCTATGCGGCGGATGCGCATCGAAGCACGAAAAAAGAGAAAATTAGAAAAGGATCTCGTGCTATATGGTGGTGTTCTACCAGCTGACCGGGCAGTTGATGATCAGAATGATGATCAAGAGGATGAGGAAGAGGAGCCATTAGCACCATTTTCTGAGGCAAGAACGTATGACAACGGAAATGTCAAAGTAACTGTGACAACAAGTGAGGTATCTCGGGAGGGCGAAATTGATCCAATTGACAAGCCACAGACAGCAATAGCTCAGTTGCTTGGAAAGGATAAGAAGCATAACCTGCCAATTACCAAAAAGAAGCTATTCAAGAAAGTAGCAAAACAGAGGTCAAGGCCAAAGCTTCGAAGTAAAAGAGACAAAAAGAAAGGAAGGAAAAAGAAATAG

Protein sequence

MVKNDGEEGGELAQPHARHIKKRALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQKEEAMRRMRIEARKKRKLEKDLVLYGGVLPADRAVDDQNDDQEDEEEEPLAPFSEARTYDNGNVKVTVTTSEVSREGEIDPIDKPQTAIAQLLGKDKKHNLPITKKKLFKKVAKQRSRPKLRSKRDKKKGRKKK

Homology

[Close]

BLAST of Pay0004542 vs. ExPASy TrEMBL
Match: A0A1S3C1A3 (ribosomal RNA-processing protein 17 OS=Cucumis melo OX=3656 GN=LOC103495882 PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 6.9e-94
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MVKNDGEEGGELAQPHARHIKKRALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60
           MVKNDGEEGGELAQPHARHIKKRALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ
Sbjct: 1   MVKNDGEEGGELAQPHARHIKKRALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60

Query: 61  KEEAMRRMRIEARKKRKLEKDLVLYGGVLPADRAVDDQNDDQEDEEEEPLAPFSEARTYD 120
           KEEAMRRMRIEARKKRKLEKDLVLYGGVLPADRAVDDQNDDQEDEEEEPLAPFSEARTYD
Sbjct: 61  KEEAMRRMRIEARKKRKLEKDLVLYGGVLPADRAVDDQNDDQEDEEEEPLAPFSEARTYD 120

Query: 121 NGNVKVTVTTSEVSREGEIDPIDKPQTAIAQLLGKDKKHNLPITKKKLFKKVAKQRSRPK 180
           NGNVKVTVTTSEVSREGEIDPIDKPQTAIAQLLGKDKKHNLPITKKKLFKKVAKQRSRPK
Sbjct: 121 NGNVKVTVTTSEVSREGEIDPIDKPQTAIAQLLGKDKKHNLPITKKKLFKKVAKQRSRPK 180

Query: 181 LRSKRDKKKGRKKK 195
           LRSKRDKKKGRKKK
Sbjct: 181 LRSKRDKKKGRKKK 194

[Close]

BLAST of Pay0004542 vs. ExPASy TrEMBL
Match: A0A0A0KYB4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G414400 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 8.1e-87
Identity = 185/196 (94.39%), Postives = 188/196 (95.92%), Query Frame = 0


Query: 1   MVKNDGEEGGELAQPHARHIKKRALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60
           MVKNDGEEGGELAQPHARHIKKRAL+NKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ
Sbjct: 1   MVKNDGEEGGELAQPHARHIKKRALRNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60

Query: 61  KEEAMRRMRIEARKKRKLEKDLVLYGGVLPADRAVDDQNDDQEDEEEEPLAPFSEARTYD 120
           KEEAMRRMRIEARKKRKLEKDLVL+GGVLPADRAVDDQNDDQ +EEEEPLAP SEA TYD
Sbjct: 61  KEEAMRRMRIEARKKRKLEKDLVLHGGVLPADRAVDDQNDDQGNEEEEPLAPLSEATTYD 120

Query: 121 NGNVKVTVTTSEVSREGEIDPIDKPQTA--IAQLLGKDKKHNLPITKKKLFKKVAKQRSR 180
           NGNVKVTVTTSEVSRE EIDPIDKPQTA   AQLLGKDKKHNLPITKKKLFKKVAKQR R
Sbjct: 121 NGNVKVTVTTSEVSREDEIDPIDKPQTATVTAQLLGKDKKHNLPITKKKLFKKVAKQRGR 180

Query: 181 PKLRSKRDKKKGRKKK 195
           PKLRSKRDKKKGRKKK
Sbjct: 181 PKLRSKRDKKKGRKKK 196

[Close]

BLAST of Pay0004542 vs. ExPASy TrEMBL
Match: A0A6J1CL67 (ribosomal RNA-processing protein 17-like OS=Momordica charantia OX=3673 GN=LOC111012309 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.5e-75
Identity = 161/194 (82.99%), Postives = 174/194 (89.69%), Query Frame = 0


Query: 1   MVKNDGEEGGELAQPHARHIKKRALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60
           MVKNDG+EGGELAQP  RHIKKRALKNKAL+VSFNEKDLRDYVTGFHKRKKKRRKEAEKQ
Sbjct: 1   MVKNDGDEGGELAQPRGRHIKKRALKNKALAVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60

Query: 61  KEEAMRRMRIEARKKRKLEKDLVLYGGVLPADRAVDDQNDDQEDEEEEPLAPFSEARTYD 120
           +EEA RR RIE RKKRK EK+LVLYGG+LPADR VD+QNDD E+EEE+P AP SE  TYD
Sbjct: 61  QEEAKRRKRIELRKKRKEEKELVLYGGILPADRPVDEQNDDHEEEEEKPFAPISETTTYD 120

Query: 121 NGNVKVTVTTSEVSREGEIDPIDKPQTAIAQLLGKDKKHNLPITKKKLFKKVAKQRSRPK 180
           +GN+KVTV TSEVSR+GEI PIDK QTA  QL+ KDKKHNLPITKKK FKKVAKQ+SRPK
Sbjct: 121 SGNIKVTVITSEVSRDGEICPIDKSQTATTQLVAKDKKHNLPITKKKPFKKVAKQKSRPK 180

Query: 181 LRSKRDKKKGRKKK 195
            RSKRDKKKGRKKK
Sbjct: 181 PRSKRDKKKGRKKK 194

[Close]

BLAST of Pay0004542 vs. ExPASy TrEMBL
Match: A0A6J1EG67 (ribosomal RNA-processing protein 17 OS=Cucurbita moschata OX=3662 GN=LOC111433808 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.3e-71
Identity = 157/198 (79.29%), Postives = 173/198 (87.37%), Query Frame = 0


Query: 1   MVKNDGEEGGELAQPHARHIKKRALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60
           MVKN+ EEGG L QPHARHIKK+ALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ
Sbjct: 1   MVKNEAEEGGALTQPHARHIKKKALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60

Query: 61  KEEAMRRMRIEARKKRKLEKDLVLYGGVLPADRAVDDQNDD----QEDEEEEPLAPFSEA 120
           +EEA RR RIE RKKRK+EKDLVL+GGVLPADR VD+QNDD     EDEEE+PLAP SE 
Sbjct: 61  QEEAKRRKRIEERKKRKIEKDLVLHGGVLPADRPVDEQNDDLKDGDEDEEEKPLAPISET 120

Query: 121 RTYDNGNVKVTVTTSEVSREGEIDPIDKPQTAIAQLLGKDKKHNLPITKKKLFKKVAKQR 180
             YD+GN+KVTVTTSEV R+ EIDPIDKPQ + +QLL KDKKH+LPITKKK FKKVA+++
Sbjct: 121 TMYDSGNIKVTVTTSEVRRDEEIDPIDKPQASTSQLLAKDKKHSLPITKKKPFKKVARKK 180

Query: 181 SRPKLRSKRDKKKGRKKK 195
           SR K RSK DKKKGRKKK
Sbjct: 181 SRSKSRSKTDKKKGRKKK 198

[Close]

BLAST of Pay0004542 vs. ExPASy TrEMBL
Match: A0A6J1KRQ7 (ribosomal RNA-processing protein 17 OS=Cucurbita maxima OX=3661 GN=LOC111497040 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 8.2e-71
Identity = 155/198 (78.28%), Postives = 173/198 (87.37%), Query Frame = 0


Query: 1   MVKNDGEEGGELAQPHARHIKKRALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60
           MVKN+  EGG L QP++RH+KK+ALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ
Sbjct: 1   MVKNEAAEGGALTQPYSRHVKKKALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60

Query: 61  KEEAMRRMRIEARKKRKLEKDLVLYGGVLPADRAVDDQNDD----QEDEEEEPLAPFSEA 120
           +EEA RR RIE RKKRK+EKDLVL+GGVLPADR VD+QNDD     EDEEE+PLAP SE 
Sbjct: 61  QEEAKRRKRIEERKKRKIEKDLVLHGGVLPADRPVDEQNDDLKDGDEDEEEKPLAPISET 120

Query: 121 RTYDNGNVKVTVTTSEVSREGEIDPIDKPQTAIAQLLGKDKKHNLPITKKKLFKKVAKQR 180
            TYD+GN+KVTVTTSEV RE EIDPIDKPQ + +QLL KDKKH+LPITKKK FKKVA+++
Sbjct: 121 TTYDSGNIKVTVTTSEVRREEEIDPIDKPQASTSQLLAKDKKHSLPITKKKPFKKVARKK 180

Query: 181 SRPKLRSKRDKKKGRKKK 195
           SR K RSK DKKKGRKKK
Sbjct: 181 SRSKSRSKTDKKKGRKKK 198

[Close]

BLAST of Pay0004542 vs. NCBI nr
Match: XP_008455785.1 (PREDICTED: ribosomal RNA-processing protein 17 [Cucumis melo])

HSP 1 Score: 353.2 bits (905), Expect = 1.4e-93
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MVKNDGEEGGELAQPHARHIKKRALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60
           MVKNDGEEGGELAQPHARHIKKRALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ
Sbjct: 1   MVKNDGEEGGELAQPHARHIKKRALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60

Query: 61  KEEAMRRMRIEARKKRKLEKDLVLYGGVLPADRAVDDQNDDQEDEEEEPLAPFSEARTYD 120
           KEEAMRRMRIEARKKRKLEKDLVLYGGVLPADRAVDDQNDDQEDEEEEPLAPFSEARTYD
Sbjct: 61  KEEAMRRMRIEARKKRKLEKDLVLYGGVLPADRAVDDQNDDQEDEEEEPLAPFSEARTYD 120

Query: 121 NGNVKVTVTTSEVSREGEIDPIDKPQTAIAQLLGKDKKHNLPITKKKLFKKVAKQRSRPK 180
           NGNVKVTVTTSEVSREGEIDPIDKPQTAIAQLLGKDKKHNLPITKKKLFKKVAKQRSRPK
Sbjct: 121 NGNVKVTVTTSEVSREGEIDPIDKPQTAIAQLLGKDKKHNLPITKKKLFKKVAKQRSRPK 180

Query: 181 LRSKRDKKKGRKKK 195
           LRSKRDKKKGRKKK
Sbjct: 181 LRSKRDKKKGRKKK 194

[Close]

BLAST of Pay0004542 vs. NCBI nr
Match: XP_031740787.1 (ribosomal RNA-processing protein 17 isoform X1 [Cucumis sativus] >KGN54640.1 hypothetical protein Csa_011960 [Cucumis sativus])

HSP 1 Score: 329.7 bits (844), Expect = 1.7e-86
Identity = 185/196 (94.39%), Postives = 188/196 (95.92%), Query Frame = 0


Query: 1   MVKNDGEEGGELAQPHARHIKKRALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60
           MVKNDGEEGGELAQPHARHIKKRAL+NKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ
Sbjct: 1   MVKNDGEEGGELAQPHARHIKKRALRNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60

Query: 61  KEEAMRRMRIEARKKRKLEKDLVLYGGVLPADRAVDDQNDDQEDEEEEPLAPFSEARTYD 120
           KEEAMRRMRIEARKKRKLEKDLVL+GGVLPADRAVDDQNDDQ +EEEEPLAP SEA TYD
Sbjct: 61  KEEAMRRMRIEARKKRKLEKDLVLHGGVLPADRAVDDQNDDQGNEEEEPLAPLSEATTYD 120

Query: 121 NGNVKVTVTTSEVSREGEIDPIDKPQTA--IAQLLGKDKKHNLPITKKKLFKKVAKQRSR 180
           NGNVKVTVTTSEVSRE EIDPIDKPQTA   AQLLGKDKKHNLPITKKKLFKKVAKQR R
Sbjct: 121 NGNVKVTVTTSEVSREDEIDPIDKPQTATVTAQLLGKDKKHNLPITKKKLFKKVAKQRGR 180

Query: 181 PKLRSKRDKKKGRKKK 195
           PKLRSKRDKKKGRKKK
Sbjct: 181 PKLRSKRDKKKGRKKK 196

[Close]

BLAST of Pay0004542 vs. NCBI nr
Match: XP_038881021.1 (nucleolar protein 12 [Benincasa hispida])

HSP 1 Score: 299.7 bits (766), Expect = 1.9e-77
Identity = 165/198 (83.33%), Postives = 181/198 (91.41%), Query Frame = 0


Query: 1   MVKNDGEEGGELAQPHARHIKKRALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60
           MV+NDGEEG ELAQPHARHIKKRAL+NKALSVSFNEKDLRD+VTGFHKRKKKRRKEA+KQ
Sbjct: 9   MVRNDGEEGAELAQPHARHIKKRALRNKALSVSFNEKDLRDFVTGFHKRKKKRRKEAKKQ 68

Query: 61  KEEAMRRMRIEARKKRKLEKDLVLYGGVLPADRAVDDQNDD----QEDEEEEPLAPFSEA 120
           +EEA+RR RIEARKKR+LEKDLVLYGGVLPADR VD++NDD    +EDEEE+PLAPFSE 
Sbjct: 69  QEEAIRRKRIEARKKRRLEKDLVLYGGVLPADRPVDEENDDHEEGEEDEEEKPLAPFSET 128

Query: 121 RTYDNGNVKVTVTTSEVSREGEIDPIDKPQTAIAQLLGKDKKHNLPITKKKLFKKVAKQR 180
            TYD+GN+KVTV TSEVSRE EIDPIDKPQTA  QL  KDKKHNLP+TKKK FKKVAKQR
Sbjct: 129 TTYDSGNIKVTVITSEVSREEEIDPIDKPQTATTQLFAKDKKHNLPVTKKKPFKKVAKQR 188

Query: 181 SRPKLRSKRDKKKGRKKK 195
           SRPK RSKRDK+KG+KKK
Sbjct: 189 SRPKARSKRDKRKGKKKK 206

[Close]

BLAST of Pay0004542 vs. NCBI nr
Match: XP_022142095.1 (ribosomal RNA-processing protein 17-like [Momordica charantia] >XP_022142096.1 ribosomal RNA-processing protein 17-like [Momordica charantia])

HSP 1 Score: 291.6 bits (745), Expect = 5.1e-75
Identity = 161/194 (82.99%), Postives = 174/194 (89.69%), Query Frame = 0


Query: 1   MVKNDGEEGGELAQPHARHIKKRALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60
           MVKNDG+EGGELAQP  RHIKKRALKNKAL+VSFNEKDLRDYVTGFHKRKKKRRKEAEKQ
Sbjct: 1   MVKNDGDEGGELAQPRGRHIKKRALKNKALAVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60

Query: 61  KEEAMRRMRIEARKKRKLEKDLVLYGGVLPADRAVDDQNDDQEDEEEEPLAPFSEARTYD 120
           +EEA RR RIE RKKRK EK+LVLYGG+LPADR VD+QNDD E+EEE+P AP SE  TYD
Sbjct: 61  QEEAKRRKRIELRKKRKEEKELVLYGGILPADRPVDEQNDDHEEEEEKPFAPISETTTYD 120

Query: 121 NGNVKVTVTTSEVSREGEIDPIDKPQTAIAQLLGKDKKHNLPITKKKLFKKVAKQRSRPK 180
           +GN+KVTV TSEVSR+GEI PIDK QTA  QL+ KDKKHNLPITKKK FKKVAKQ+SRPK
Sbjct: 121 SGNIKVTVITSEVSRDGEICPIDKSQTATTQLVAKDKKHNLPITKKKPFKKVAKQKSRPK 180

Query: 181 LRSKRDKKKGRKKK 195
            RSKRDKKKGRKKK
Sbjct: 181 PRSKRDKKKGRKKK 194

[Close]

BLAST of Pay0004542 vs. NCBI nr
Match: XP_023517913.1 (ribosomal RNA-processing protein 17 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 279.6 bits (714), Expect = 2.0e-71
Identity = 156/198 (78.79%), Postives = 174/198 (87.88%), Query Frame = 0


Query: 1   MVKNDGEEGGELAQPHARHIKKRALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60
           MVKN+ EEGG L QPHARHIKK+ALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ
Sbjct: 1   MVKNEAEEGGALTQPHARHIKKKALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60

Query: 61  KEEAMRRMRIEARKKRKLEKDLVLYGGVLPADRAVDDQNDD----QEDEEEEPLAPFSEA 120
           +EEA RR RIE RKKRK+EK+LVL+GGVLPADR VD+QNDD     EDEEE+PLAP SE 
Sbjct: 61  QEEAKRRKRIEERKKRKIEKELVLHGGVLPADRPVDEQNDDLKDGDEDEEEKPLAPISET 120

Query: 121 RTYDNGNVKVTVTTSEVSREGEIDPIDKPQTAIAQLLGKDKKHNLPITKKKLFKKVAKQR 180
            TYD+GN+KVTVTTSEV R+ EIDPIDKPQ + +QLL KDKKH+LP+TKKK FKKVA+++
Sbjct: 121 TTYDSGNIKVTVTTSEVRRDEEIDPIDKPQASTSQLLAKDKKHSLPVTKKKPFKKVARKK 180

Query: 181 SRPKLRSKRDKKKGRKKK 195
           SR K RSK DKKKGRKKK
Sbjct: 181 SRSKSRSKTDKKKGRKKK 198

[Close]

BLAST of Pay0004542 vs. TAIR 10
Match: AT1G11240.1 (CONTAINS InterPro DOMAIN/s: Nucleolar protein 12 (InterPro:IPR019186); Has 2484 Blast hits to 1934 proteins in 262 species: Archae - 0; Bacteria - 90; Metazoa - 921; Fungi - 378; Plants - 144; Viruses - 18; Other Eukaryotes - 933 (source: NCBI BLink). )

HSP 1 Score: 142.1 bits (357), Expect = 4.6e-34
Identity = 104/187 (55.61%), Postives = 126/187 (67.38%), Query Frame = 0


Query: 7   EEGGELAQP-HARHIKKRALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQKEEAM 66
           EE G LA P  ARHI KRA KNK+L+VSF+EKDL+D+VTGFHKRKKKRRKEA+KQ+EEA 
Sbjct: 8   EEAGSLATPTSARHIGKRARKNKSLTVSFDEKDLKDFVTGFHKRKKKRRKEAQKQQEEAF 67

Query: 67  RRMRIEARKKRKLEKDLVLYGGVLPADRAVDDQNDDQEDEEEEPLAPFSEARTYDNGNVK 126
           RR RIEARK RKLE+ +V   G    D   +D+  D EDEE EP A  S    YD G +K
Sbjct: 68  RRKRIEARKNRKLEELMVAGNGEDNEDGEAEDE-VDAEDEEAEPDASTSATTMYDTGELK 127

Query: 127 VTVTTSEVSREGEIDPIDKPQTAIAQLLGKDK---KHNLPITKKKLFKKVAKQRSRPKLR 186
           VTVTTSE+SRE E +PI K +T   +     K   K  +P+ K K  K+ +++RS  K  
Sbjct: 128 VTVTTSEISREEE-EPIRKEKTQSTESGSTAKASTKQPVPVRKTKPMKQ-SRRRSTTKTM 187

Query: 187 SKRDKKK 190
            KRDKKK
Sbjct: 188 KKRDKKK 191

The following BLAST results are available for this feature:

BLAST of Pay0004542 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0004542 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C1A3	6.9e-94	100.00	ribosomal RNA-processing protein 17 OS=Cucumis melo OX=3656 GN=LOC103495882 PE=3...	[more]
A0A0A0KYB4	8.1e-87	94.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G414400 PE=3 SV=1	[more]
A0A6J1CL67	2.5e-75	82.99	ribosomal RNA-processing protein 17-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1EG67	1.3e-71	79.29	ribosomal RNA-processing protein 17 OS=Cucurbita moschata OX=3662 GN=LOC11143380...	[more]
A0A6J1KRQ7	8.2e-71	78.28	ribosomal RNA-processing protein 17 OS=Cucurbita maxima OX=3661 GN=LOC111497040 ...	[more]

BLAST of Pay0004542 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455785.1	1.4e-93	100.00	PREDICTED: ribosomal RNA-processing protein 17 [Cucumis melo]	[more]
XP_031740787.1	1.7e-86	94.39	ribosomal RNA-processing protein 17 isoform X1 [Cucumis sativus] >KGN54640.1 hyp...	[more]
XP_038881021.1	1.9e-77	83.33	nucleolar protein 12 [Benincasa hispida]	[more]
XP_022142095.1	5.1e-75	82.99	ribosomal RNA-processing protein 17-like [Momordica charantia] >XP_022142096.1 r...	[more]
XP_023517913.1	2.0e-71	78.79	ribosomal RNA-processing protein 17 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Pay0004542 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11240.1	4.6e-34	55.61	CONTAINS InterPro DOMAIN/s: Nucleolar protein 12 (InterPro:IPR019186); Has 2484 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 47..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..65
IPR019186	Nucleolar protein 12	PFAM	PF09805	Nop25	coord: 21..116 e-value: 1.4E-16 score: 61.2
IPR019186	Nucleolar protein 12	PANTHER	PTHR14577	NUCLEOLAR PROTEIN 12	coord: 11..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0004542.1	Pay0004542.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003723	RNA binding