Pay0003298 (gene) Melon (Payzawat) v1

Overview


Name	Pay0003298
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	folate transporter 1, chloroplastic-like
Location	chr09: 14397341 .. 14397663 (+)
RNA-Seq Expression	Pay0003298
Synteny	Pay0003298

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAACAATTCATAGATGTGTTTTGTTGCTACAACAGGTTTCTCATGGTGCCATTCAATTTACAGTCTATGAAGAACTCCGTAAAGTTATTGCCAACTCAAGGTCTAAAGGGACCAGAGTCGATGCTCAAAGTTCCGGGGAATTACTGGTACAAATTTTTGGCTTGAGTTTACTCCATTAGATCCTTGGAATGTGAAATGGAAACTCTTAGTCTCTTATTGTGAACTGTCTCTCACACAGAATTCCGGTGATTATGCTGTTCTTGGAGGAACTTCTAAAATTGCTGCCATGCTTTTGACATACCCATTTCAAGTAAATTGA

mRNA sequence

ATGGGAACAATTCATAGATGTGTTTTGTTGCTACAACAGGTTTCTCATGGTGCCATTCAATTTACAGTCTATGAAGAACTCCGTAAAGTTATTGCCAACTCAAGGTCTAAAGGGACCAGAGTCGATGCTCAAAGTTCCGGGGAATTACTGAATTCCGGTGATTATGCTGTTCTTGGAGGAACTTCTAAAATTGCTGCCATGCTTTTGACATACCCATTTCAAGTAAATTGA

Coding sequence (CDS)

ATGGGAACAATTCATAGATGTGTTTTGTTGCTACAACAGGTTTCTCATGGTGCCATTCAATTTACAGTCTATGAAGAACTCCGTAAAGTTATTGCCAACTCAAGGTCTAAAGGGACCAGAGTCGATGCTCAAAGTTCCGGGGAATTACTGAATTCCGGTGATTATGCTGTTCTTGGAGGAACTTCTAAAATTGCTGCCATGCTTTTGACATACCCATTTCAAGTAAATTGA

Protein sequence

MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLLTYPFQVN

Homology

[Close]

BLAST of Pay0003298 vs. ExPASy Swiss-Prot
Match: Q7XA87 (Folate transporter 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FOLT1 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.6e-14
Identity = 40/62 (64.52%), Postives = 50/62 (80.65%), Query Frame = 0


Query: 14  VSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLLTYPF 73
           VSHGAIQFT YEELRK+I + + +  R  ++S+  LLNS DYA LGG+SK+AA+LLTYPF
Sbjct: 176 VSHGAIQFTAYEELRKIIVDLKER--RRKSESTDNLLNSADYAALGGSSKVAAVLLTYPF 235

Query: 74  QV 76
           QV
Sbjct: 236 QV 235

[Close]

BLAST of Pay0003298 vs. ExPASy TrEMBL
Match: A0A1S3CS94 (folate transporter 1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103504213 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.5e-33
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGG 60
          MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGG
Sbjct: 1  MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGG 60

Query: 61 TSKIAAMLLTYPFQVN 77
          TSKIAAMLLTYPFQVN
Sbjct: 61 TSKIAAMLLTYPFQVN 76

[Close]

BLAST of Pay0003298 vs. ExPASy TrEMBL
Match: A0A5D3BGA3 (Putative receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold222G00150 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.0e-25
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 10  LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL 69
           L+ QVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL
Sbjct: 231 LMLQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL 290

Query: 70  TYPFQV 76
           TYPFQV
Sbjct: 291 TYPFQV 296

[Close]

BLAST of Pay0003298 vs. ExPASy TrEMBL
Match: A0A1S3B2N4 (folate transporter 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485089 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.7e-25
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 10  LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL 69
           L+ QVSHGAIQFTVYEELRK+IANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL
Sbjct: 169 LMLQVSHGAIQFTVYEELRKIIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL 228

Query: 70  TYPFQV 76
           TYPFQV
Sbjct: 229 TYPFQV 234

[Close]

BLAST of Pay0003298 vs. ExPASy TrEMBL
Match: A0A5D3CM20 (Folate transporter 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001670 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.5e-25
Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 10  LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL 69
           L+ QVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL
Sbjct: 177 LMLQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL 236

Query: 70  TYPFQ 75
           TYPFQ
Sbjct: 237 TYPFQ 241

[Close]

BLAST of Pay0003298 vs. ExPASy TrEMBL
Match: A0A5A7SHT3 (Folate transporter 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold253G002040 PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.9e-25
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 10  LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL 69
           L+ QVSHGAIQFTVYEELRK+IANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL
Sbjct: 177 LMLQVSHGAIQFTVYEELRKIIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL 236

Query: 70  TYPFQ 75
           TYPFQ
Sbjct: 237 TYPFQ 241

[Close]

BLAST of Pay0003298 vs. NCBI nr
Match: XP_008466887.1 (PREDICTED: folate transporter 1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 149.8 bits (377), Expect = 9.3e-33
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGG 60
          MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGG
Sbjct: 1  MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGG 60

Query: 61 TSKIAAMLLTYPFQVN 77
          TSKIAAMLLTYPFQVN
Sbjct: 61 TSKIAAMLLTYPFQVN 76

[Close]

BLAST of Pay0003298 vs. NCBI nr
Match: TYJ98104.1 (putative receptor-like protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 124.4 bits (311), Expect = 4.2e-25
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 10  LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL 69
           L+ QVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL
Sbjct: 231 LMLQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL 290

Query: 70  TYPFQV 76
           TYPFQV
Sbjct: 291 TYPFQV 296

[Close]

BLAST of Pay0003298 vs. NCBI nr
Match: XP_008440771.1 (PREDICTED: folate transporter 1, chloroplastic isoform X1 [Cucumis melo] >XP_016899232.1 PREDICTED: folate transporter 1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 124.0 bits (310), Expect = 5.5e-25
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 10  LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL 69
           L+ QVSHGAIQFTVYEELRK+IANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL
Sbjct: 169 LMLQVSHGAIQFTVYEELRKIIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL 228

Query: 70  TYPFQV 76
           TYPFQV
Sbjct: 229 TYPFQV 234

[Close]

BLAST of Pay0003298 vs. NCBI nr
Match: TYK12585.1 (folate transporter 1 [Cucumis melo var. makuwa])

HSP 1 Score: 123.2 bits (308), Expect = 9.3e-25
Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 10  LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL 69
           L+ QVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL
Sbjct: 177 LMLQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL 236

Query: 70  TYPFQ 75
           TYPFQ
Sbjct: 237 TYPFQ 241

[Close]

BLAST of Pay0003298 vs. NCBI nr
Match: KAA0025710.1 (folate transporter 1 [Cucumis melo var. makuwa])

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-24
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 10  LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL 69
           L+ QVSHGAIQFTVYEELRK+IANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL
Sbjct: 177 LMLQVSHGAIQFTVYEELRKIIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLL 236

Query: 70  TYPFQ 75
           TYPFQ
Sbjct: 237 TYPFQ 241

[Close]

BLAST of Pay0003298 vs. TAIR 10
Match: AT5G66380.1 (folate transporter 1 )

HSP 1 Score: 79.7 bits (195), Expect = 1.1e-15
Identity = 40/62 (64.52%), Postives = 50/62 (80.65%), Query Frame = 0


Query: 14  VSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLLTYPF 73
           VSHGAIQFT YEELRK+I + + +  R  ++S+  LLNS DYA LGG+SK+AA+LLTYPF
Sbjct: 176 VSHGAIQFTAYEELRKIIVDLKER--RRKSESTDNLLNSADYAALGGSSKVAAVLLTYPF 235

Query: 74  QV 76
           QV
Sbjct: 236 QV 235

The following BLAST results are available for this feature:

BLAST of Pay0003298 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XA87	1.6e-14	64.52	Folate transporter 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FOLT1 PE=...	[more]

BLAST of Pay0003298 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CS94	4.5e-33	100.00	folate transporter 1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103504213...	[more]
A0A5D3BGA3	2.0e-25	96.97	Putative receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3B2N4	2.7e-25	95.45	folate transporter 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5D3CM20	4.5e-25	96.92	Folate transporter 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255...	[more]
A0A5A7SHT3	5.9e-25	95.38	Folate transporter 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold253...	[more]

BLAST of Pay0003298 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466887.1	9.3e-33	100.00	PREDICTED: folate transporter 1, chloroplastic-like [Cucumis melo]	[more]
TYJ98104.1	4.2e-25	96.97	putative receptor-like protein kinase [Cucumis melo var. makuwa]	[more]
XP_008440771.1	5.5e-25	95.45	PREDICTED: folate transporter 1, chloroplastic isoform X1 [Cucumis melo] >XP_016...	[more]
TYK12585.1	9.3e-25	96.92	folate transporter 1 [Cucumis melo var. makuwa]	[more]
KAA0025710.1	1.2e-24	95.38	folate transporter 1 [Cucumis melo var. makuwa]	[more]

BLAST of Pay0003298 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66380.1	1.1e-15	64.52	folate transporter 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023395	Mitochondrial carrier domain superfamily	GENE3D	1.50.40.10	Mitochondrial carrier domain	coord: 7..76 e-value: 5.1E-8 score: 34.1
IPR023395	Mitochondrial carrier domain superfamily	SUPERFAMILY	103506	Mitochondrial carrier	coord: 9..75
None	No IPR available	PANTHER	PTHR45683:SF12	BNAA09G07970D PROTEIN	coord: 10..75
IPR044712	NAD/FAD transporter SLC25A32-like	PANTHER	PTHR45683	MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED	coord: 10..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0003298.1	Pay0003298.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035350	FAD transmembrane transport
biological_process	GO:0015884	folic acid transport
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006862	nucleotide transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0015230	FAD transmembrane transporter activity
molecular_function	GO:0008517	folic acid transmembrane transporter activity
molecular_function	GO:0016301	kinase activity