|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAGATAAATGCAAGAAATTCAAGTGTCAGGTAATCATAATCCTAAACTTAGTAAAGATCTATCTCATCCTTATCATTATACTTCTTTATTCTTCAATTCTGATCTCTGACTTGAGCGTCGGAGTCTTTTTTTTTGTTTTGCAGATTCTCCTTTCTCAAATTACAAATTTACGGTTACCATCGAAGCTTAGGTGCGTTTCGTCACATTTGCTACTAAGAAAGATTATGTGAAATAAATATATACAAAAACGAATGTGATTACTAATTGAAGAGGACAGAATGGTCATTTTAATAGATTGGCCACAACTTCTAGTCTTTCGTCTTCACCAGTCCACCGTTACGGTAATTTAACACGCCGGGAAGGAAAACATCAAATCTATTAAATTCTTCTTCAAGCTCGAGGAGTTTGGAGCAGCAGCTGCAAATTCCTTCCTCTGCCGGAGATTTTCCTTCCAATTTTCTATGTCTCAGGTCAGTTTAACTTCGTTCTTTCTTTGATTCCTTCTTCCTGGAACTTCCATTTCTTGTTCTCTGATTTCGTTTTTGTTGCCAGTTATACGTTATGTGA mRNA sequence ATGGAGATAAATGCAAGAAATTCAAGTGTCAGATTCTCCTTTCTCAAATTACAAATTTACGGTTACCATCGAAGCTTAGAGGACAGAATGGTCATTTTAATAGATTGGCCACAACTTCTAGTCTTTCGTCTTCACCAGTCCACCGTTACGCTCGAGGAGTTTGGAGCAGCAGCTGCAAATTCCTTCCTCTGCCGGAGATTTTCCTTCCAATTTTCTATGTCTCAGTTATACGTTATGTGA Coding sequence (CDS) ATGGAGATAAATGCAAGAAATTCAAGTGTCAGATTCTCCTTTCTCAAATTACAAATTTACGGTTACCATCGAAGCTTAGAGGACAGAATGGTCATTTTAATAGATTGGCCACAACTTCTAGTCTTTCGTCTTCACCAGTCCACCGTTACGCTCGAGGAGTTTGGAGCAGCAGCTGCAAATTCCTTCCTCTGCCGGAGATTTTCCTTCCAATTTTCTATGTCTCAGTTATACGTTATGTGA Protein sequence MEINARNSSVRFSFLKLQIYGYHRSLEDRMVILIDWPQLLVFRLHQSTVTLEEFGAAAANSFLCRRFSFQFSMSQLYVM
Homology
BLAST of Pay0003037 vs. ExPASy TrEMBL
Match: A0A5D3BVX8 (Transmembrane 9 superfamily member OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00650 PE=3 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 4.1e-13 Identity = 43/52 (82.69%), Postives = 43/52 (82.69%), Query Frame = 0
Query: 1 MEINARNSSVRFSFLKLQIYGYHRSLEDRMVILIDWPQLLVFRLHQSTVTLE 53
MEINARNSSVRFSFLKLQIYGYHRSL DWPQLLVFRLHQSTVT E
Sbjct: 1 MEINARNSSVRFSFLKLQIYGYHRSL--------DWPQLLVFRLHQSTVTFE 44
BLAST of Pay0003037 vs. NCBI nr
Match: TYK03637.1 (transmembrane 9 superfamily member 11-like [Cucumis melo var. makuwa]) HSP 1 Score: 83.6 bits (205), Expect = 8.5e-13 Identity = 43/52 (82.69%), Postives = 43/52 (82.69%), Query Frame = 0
Query: 1 MEINARNSSVRFSFLKLQIYGYHRSLEDRMVILIDWPQLLVFRLHQSTVTLE 53
MEINARNSSVRFSFLKLQIYGYHRSL DWPQLLVFRLHQSTVT E
Sbjct: 1 MEINARNSSVRFSFLKLQIYGYHRSL--------DWPQLLVFRLHQSTVTFE 44
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BVX8 | 4.1e-13 | 82.69 | Transmembrane 9 superfamily member OS=Cucumis melo var. makuwa OX=1194695 GN=E56... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYK03637.1 | 8.5e-13 | 82.69 | transmembrane 9 superfamily member 11-like [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0010008 |
endosome membrane |
| cellular_component |
GO:0000139 |
Golgi membrane |
| cellular_component |
GO:0016021 |
integral component of membrane |
|
