Pay0002625 (gene) Melon (Payzawat) v1

Overview


Name	Pay0002625
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Nuclear transcription factor Y subunit B
Location	chr04: 32023589 .. 32027341 (-)
RNA-Seq Expression	Pay0002625
Synteny	Pay0002625

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAATAAAAAGCGCTTTGGTTTTGCCCTTTTCCTCTCCTGAATTTGCCCTGAAAAAGGGAAAAACAAAAAACGAACGGTGCTGATAAACTTGATTCTCTCATCTCAGTCGTCTCCTTTCTCCTATCTTCACCATCGTCCGATTCCATTCCACCACTCCATTTCCACCCGATCTAAATCCTTCTCTCTCGCGCCCAAATTACAAATCTTCCGTTTTCTCCCACCAGGTAAAAGAAATATTTCTTCCCTTTTCTTTTTTCCTTTCAATTTTTCAATTCTCTCAATTCGTCTCCCTTCAAACCGACAATACCCTTTTTTCGTATTTCCATGGCTTTTCCAACCTTTTTCCACTCTTATTTCTCACCCATCTTCCATTTTTGTTTCTGGGTTCTTCTCGACGTTCCGTTTTATGGTCCTGTTCATGGGTTTTGTTTCGTTTTTTCTGGTTTATGGGATTGATGATGTTATTTCCCTTATAGGGTTTTGGTGAAGATGGCTGATGCTCCGGCGAGTCCCGGCGGAGGAAGCCATGAGAGCGGTGAGCAGAGTCCGAGGTCTAATGTTCGCGAACAGGATAGGTTTCTTCCTATTGCGAATATTAGTAGGATCATGAAGAAGGCTCTTCCTGCTAATGGGAAGATTGCTAAGGATGCTAAAGAAACCGTACAAGAATGTGTATCGGAGTTTATCAGTTTTATTACTAGCGAGTACGCGAGTATTTTTATGATCAGTTTTGATTAATTAGTTTTCCCTTCTCCATGTTCTGAATTTGGGGGATTTTTTTTCGATGGTTGAATTGTTTCTACTTTCTAGGGCAAGTGATAAATGTCAAAGAGAGAAACGGAAGACGATTAATGGTGATGATTTACTTTGGGCCATGGCCACTCTTGGATTTGAGGATTATATCGATCCACTTAAAACCTACTTGACGAAATACAGAGAGGTAGTCATTCGACTAGTTCTGATGTTTTAACTCTTATGAAGATATTGTTCATTATCCACTTTTCACGATTCGGTTGATGGTTTTAACAGGGGGCCTTGCATCTAGACTTGTGAACTTTTTTGGGGACTCTTTGATAACGTTTTGGTTTCTGGTTAATGGTGTGGCGTTTTTTAAATTTATGCTTGTTTTCTCATCATTTCTTTATGAAAGGCGAAAAGGAATTTTGAATTCTTATTCAAAATCCAAAAACAGAAGCAAGTTTTTGGAAACTAAATTTTTATTTTTATTTTTAAGATTTAGCTAAGAATTCAAACTTTTCCATAAGTAAGATGAAAATCATATTAAAAATAGTGTAGAAAAACAAGCACATTCTTTAAGAACCATAAACCATAAACTAAATGGTTATCAATGGAGGTTTATTTGTTTATTTTTGGTGGTTAATTTTACTGCTTTTCGTTGTGTTCTTCAACTGATGGGCGGATGCTATGGTTTTGCATTTTTTTGCCTGCTGGTTGGAACTTGGGACGTTTTAGACGGAGGTAAGATAAGTTTTCTTATACTGTCTCTGTGAATTGTCAACATCATGTATGAAATGAGGAGGTTTTTATATAGTTTTTGTGTTTTCTTACAGGGTGACACTAAGGGGTCTGCTAAAGGTGGTGATGGGTCAGCTAAGAAAGAAGCTCATCCAACCCCTATTCCTCAGGTCCATTATATGAGTATGATATTTTTTTTTCTCATTGAGCTGGATTTTTTGGTGTTTTCTTCTGACCTTCTCTTTTTTCAAATTCTATAGATGGCTCATCAAGGGTCGTTTTCCCAAGGAGTTAATTATGCAAGTTCTCAAGTACTCTCTCTCTCTCTCTCTCTCCCACACTCAAATAAAAATGTGCATGTACTTTCACAATGTCTTCTGAAGAAGAAGCAGTTTGGCTGTCCTCGGGGCGTCTAGGAGAGTGATTTTAAAATGATTAAAATCATTTTGGTCATGTTCAGAAATTCAGAATCAGTAAAAATCATTCATTTGGTCATTCAAAATCAATTTTGATGGTATGAAAATCACTTTTAAAAGTGTATAGCCAACTATTAAAATCATTTTGAATGATCTAATGTATGCTTTGGAATGATTTGACTATGATAAAACGATTTTCAGCCGTTTTAAAATCTTTTGCAAACGTGACATATTCTTTGGATGACTTTGCAACAACTCTCGGATTGCGGATGTTCTTTTTAGCTAATTACTTACTTTTGTCAAAACCCTTGCGGTTTTTGGTTGTACAACTAAATGATGCCTTGATAATTCTAAAATTACTTAAAAATTTATTTTTTGAGAAGCACTTTCTAAGGCTGCTTGTCCATCTAATTGAAAGTCATGATTACTCTTATGCCATGAAGTGATGCAAATGTGCTTGGTGGTCCTCCCATTACTTATACATCTAATTGTAGAAGTATGTGTTTGGAACTTGATCTAGTTTTCGGTTGTGGCCGGAGGTCTTTTGTGAGAATTTGCTAGAATTCATATTTTAATAATTGGTGGGTACTGGGTAGAGTCTAGAACTTTTCTTGGGGACTTGAAGTTAGAAGTTGATTTCATTTGTTATCCATTTTCTTTGGACGATGTTCGTTATTTATCCTCCAACTAGCACTCTTCTATGTTGAATCTACCTGTAAAGTAACTTCTTCATTTAATTTGTTCTCCCCCTTCATGGAGTGATTTAAGCTGTCTTTTGTTTTCCCCTTCTTTTAGCAACTTCTTTCGTTTAAGCATATTAGTTTTGTTTATGTTTATATCTTCGTGATTCCTGAAGTTATTCCTCGGGGAAAACATTTGCTTCTTATATTACCTGGGGTTTGTTTTAGAGCTCTCATATCGAAGTCTTGGTTGAAATATATGAAAAAGCAGAAAACAAGTTTGAACTTTTCGAGGAAATGGCTTATAGCAGTGAAAGGTTATTTCCATTTTAGCCATGGTGAAAGGGCAATATATTGGTATTTGTATCTTTTTAAGTTACCTAGAAGATGAGCAAGTAACCTTTTTTCAGCTTCTTTGTATTGGTATCATCTCCCTTTGTGTAAAAATGGGCAAAAGTAGTAAATCTAGAGGCTACTTTGATCATGCAACCTCCCATCCATAATAACTAATACCCATTATCAAATGAGTTATCTAAAGCAAATGAAAATATCGTAGTGCCAAATGGTTGTCCTGTGCAAATAAGATATAAAATAGCATGAATAGGAATAACCAATAAGGGCTTGTTTGGAAGTACAATAGTTTCGAGTAATGTCTTGGAAAGAAATGTTTCTATCTAAACACCTCCGAAGAATAATTTACTTCTTTCTCTCTAAGGTTTAATACCATTTTCCTTTTGTTTGCAGTCACAAGCCCAGCATCTGATGGTCCCTATGCAAGGTACTGACTGAAATTGCCTCAAATCGACCATGTAAACTGTTGAATTTGGAGATCTTTGTTCAGTATAACAGCAAAATTTGAGTCTATTTATTTAAAGTTTGGGTGGTTTTGATACTTTTAATTGTAGAAACAGTTGCAACTTTGTATATTATTATGGCTGTCTATTGGATTGGAAGTTAGGACACAGTATTTGATAGAGGTTCCAAGTCCTGAGGATCGCATTTATTCATGCTTGTAAACCTTACAACCTTTGCAAGGTCTTGTAGATCTTGAAAAAGACTTGGTAGCAGTAGCACCCTCTGGATTTTTTTTAGAATCATTTTCCTAATCAAAAGAATAAATTGTGCCATGAATGATTTGCTTCTAGGTCTTAACTCCTTTTTTATGCAGATGAAATGAA

mRNA sequence

GGAAAATAAAAAGCGCTTTGGTTTTGCCCTTTTCCTCTCCTGAATTTGCCCTGAAAAAGGGAAAAACAAAAAACGAACGGTGCTGATAAACTTGATTCTCTCATCTCAGTCGTCTCCTTTCTCCTATCTTCACCATCGTCCGATTCCATTCCACCACTCCATTTCCACCCGATCTAAATCCTTCTCTCTCGCGCCCAAATTACAAATCTTCCGTTTTCTCCCACCAGGGTTTTGGTGAAGATGGCTGATGCTCCGGCGAGTCCCGGCGGAGGAAGCCATGAGAGCGGTGAGCAGAGTCCGAGGTCTAATGTTCGCGAACAGGATAGGTTTCTTCCTATTGCGAATATTAGTAGGATCATGAAGAAGGCTCTTCCTGCTAATGGGAAGATTGCTAAGGATGCTAAAGAAACCGTACAAGAATGTGTATCGGAGTTTATCAGTTTTATTACTAGCGAGGCAAGTGATAAATGTCAAAGAGAGAAACGGAAGACGATTAATGGTGATGATTTACTTTGGGCCATGGCCACTCTTGGATTTGAGGATTATATCGATCCACTTAAAACCTACTTGACGAAATACAGAGAGACGGAGGGTGACACTAAGGGGTCTGCTAAAGGTGGTGATGGGTCAGCTAAGAAAGAAGCTCATCCAACCCCTATTCCTCAGATGGCTCATCAAGGGTCGTTTTCCCAAGGAGTTAATTATGCAAGTTCTCAATCACAAGCCCAGCATCTGATGGTCCCTATGCAAGGTACTGACTGAAATTGCCTCAAATCGACCATGTAAACTGTTGAATTTGGAGATCTTTGTTCAGTATAACAGCAAAATTTGAGTCTATTTATTTAAAGTTTGGGTGGTTTTGATACTTTTAATTGTAGAAACAGTTGCAACTTTGTATATTATTATGGCTGTCTATTGGATTGGAAGTTAGGACACAGTATTTGATAGAGGTTCCAAGTCCTGAGGATCGCATTTATTCATGCTTGTAAACCTTACAACCTTTGCAAGGTCTTGTAGATCTTGAAAAAGACTTGGTAGCAGTAGCACCCTCTGGATTTTTTTTAGAATCATTTTCCTAATCAAAAGAATAAATTGTGCCATGAATGATTTGCTTCTAGGTCTTAACTCCTTTTTTATGCAGATGAAATGAA

Coding sequence (CDS)

ATGGCTGATGCTCCGGCGAGTCCCGGCGGAGGAAGCCATGAGAGCGGTGAGCAGAGTCCGAGGTCTAATGTTCGCGAACAGGATAGGTTTCTTCCTATTGCGAATATTAGTAGGATCATGAAGAAGGCTCTTCCTGCTAATGGGAAGATTGCTAAGGATGCTAAAGAAACCGTACAAGAATGTGTATCGGAGTTTATCAGTTTTATTACTAGCGAGGCAAGTGATAAATGTCAAAGAGAGAAACGGAAGACGATTAATGGTGATGATTTACTTTGGGCCATGGCCACTCTTGGATTTGAGGATTATATCGATCCACTTAAAACCTACTTGACGAAATACAGAGAGACGGAGGGTGACACTAAGGGGTCTGCTAAAGGTGGTGATGGGTCAGCTAAGAAAGAAGCTCATCCAACCCCTATTCCTCAGATGGCTCATCAAGGGTCGTTTTCCCAAGGAGTTAATTATGCAAGTTCTCAATCACAAGCCCAGCATCTGATGGTCCCTATGCAAGGTACTGACTGA

Protein sequence

MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDTKGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD

Homology

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BLAST of Pay0002625 vs. ExPASy Swiss-Prot
Match: Q67XJ2 (Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana OX=3702 GN=NFYB10 PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.5e-62
Identity = 127/170 (74.71%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 9   GGGSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFI 68
           GGGSHES G+QSPRS NVREQDRFLPIANISRIMK+ LP NGKIAKDAKET+QECVSEFI
Sbjct: 10  GGGSHESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFI 69

Query: 69  SFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDTKGSAKG 128
           SF+TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLK YL +YRE EGDTKGS KG
Sbjct: 70  SFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGKG 129

Query: 129 GDGSAKKEAHPTPIPQMA---HQGSFSQGVNYASSQSQAQHLMVPMQGTD 174
           G+ SAK++  P+ + Q +    QGSFSQG       SQ  ++MV M GT+
Sbjct: 130 GESSAKRDGQPSQVSQFSQVPQQGSFSQG---PYGNSQGSNMMVQMPGTE 176

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BLAST of Pay0002625 vs. ExPASy Swiss-Prot
Match: Q8VYK4 (Nuclear transcription factor Y subunit B-8 OS=Arabidopsis thaliana OX=3702 GN=NFYB8 PE=1 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 4.6e-62
Identity = 134/180 (74.44%), Postives = 150/180 (83.33%), Query Frame = 0


Query: 1   MADAPA-SPGG-GSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKE 60
           MA++ A SPGG GSHES G+QSPRS +VREQDRFLPIANISRIMK+ LPANGKIAKDAKE
Sbjct: 1   MAESQAKSPGGCGSHESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKE 60

Query: 61  TVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRET 120
            VQECVSEFISF+TSEASDKCQREKRKTINGDDLLWAMATLGFEDY++PLK YL +YRE 
Sbjct: 61  IVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREM 120

Query: 121 EGDTKGSAKGGDGSAKKEAHPT---PIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 174
           EGDTKGSAKGGD +AKK+   +      Q+AHQG       Y +SQ+Q QH+MVPM GTD
Sbjct: 121 EGDTKGSAKGGDPNAKKDGQSSQNGQFSQLAHQGP------YGNSQAQ-QHMMVPMPGTD 173

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BLAST of Pay0002625 vs. ExPASy Swiss-Prot
Match: P25209 (Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.1e-58
Identity = 125/172 (72.67%), Postives = 137/172 (79.65%), Query Frame = 0


Query: 1   MADAPASP--GGGSHESGEQSPR-----SNVREQDRFLPIANISRIMKKALPANGKIAKD 60
           MA+APASP  GGGSHESG  SPR      +VREQDRFLPIANISRIMKKA+PANGKIAKD
Sbjct: 1   MAEAPASPGGGGGSHESG--SPRGGGGGGSVREQDRFLPIANISRIMKKAIPANGKIAKD 60

Query: 61  AKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKY 120
           AKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYI+PLK YL KY
Sbjct: 61  AKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKY 120

Query: 121 RETEGDTKGSAKGGDGSAKKE------AHPTPIPQMAHQGSFSQGVNYASSQ 160
           RE EGD+K +AK  DGS KK+      A  +    M  QG+++QG+ Y   Q
Sbjct: 121 REMEGDSKLTAKSSDGSIKKDALGHVGASSSAAEGMGQQGAYNQGMGYMQPQ 170

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BLAST of Pay0002625 vs. ExPASy Swiss-Prot
Match: Q60EQ4 (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB3 PE=1 SV=2)

HSP 1 Score: 220.3 bits (560), Expect = 1.7e-56
Identity = 123/179 (68.72%), Postives = 133/179 (74.30%), Query Frame = 0


Query: 1   MADAPASP--GGGSHESGEQSPR------------SNVREQDRFLPIANISRIMKKALPA 60
           MAD P SP  GGGSHESG  SPR              VREQDRFLPIANISRIMKKA+PA
Sbjct: 1   MADGPGSPGGGGGSHESG--SPRGGGGGGGGGGGGGGVREQDRFLPIANISRIMKKAIPA 60

Query: 61  NGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPL 120
           NGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYI+PL
Sbjct: 61  NGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPL 120

Query: 121 KTYLTKYRETEGDTKGSAKGGDGSAKKE------AHPTPIPQMAHQGSFSQGVNYASSQ 160
           K YL KYRE EGD+K +AK GDGS KK+         +    M  Q +++QG+ Y   Q
Sbjct: 121 KVYLQKYREMEGDSKLTAKAGDGSVKKDVLGSHGGSSSSAQGMGQQAAYNQGMGYMQPQ 177

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BLAST of Pay0002625 vs. ExPASy Swiss-Prot
Match: Q9SLG0 (Nuclear transcription factor Y subunit B-1 OS=Arabidopsis thaliana OX=3702 GN=NFYB1 PE=1 SV=2)

HSP 1 Score: 204.1 bits (518), Expect = 1.2e-51
Identity = 102/130 (78.46%), Postives = 111/130 (85.38%), Query Frame = 0


Query: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MAD P+SP G   ESG      +VREQDR+LPIANISRIMKKALP NGKI KDAK+TVQE
Sbjct: 1   MADTPSSPAGDGGESG-----GSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQE 60

Query: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120
           CVSEFISFITSEASDKCQ+EKRKT+NGDDLLWAMATLGFEDY++PLK YL +YRE EGD 
Sbjct: 61  CVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDN 120

Query: 121 KGSAKGGDGS 131
           KGS K GDGS
Sbjct: 121 KGSGKSGDGS 125

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BLAST of Pay0002625 vs. ExPASy TrEMBL
Match: A0A0A0LAB9 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G736780 PE=3 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 3.7e-91
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120
           CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT
Sbjct: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120

Query: 121 KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 174
           KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD
Sbjct: 121 KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 173

[Close]

BLAST of Pay0002625 vs. ExPASy TrEMBL
Match: A0A1S3B5N5 (nuclear transcription factor Y subunit B-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486448 PE=3 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 3.7e-91
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120
           CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT
Sbjct: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120

Query: 121 KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 174
           KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD
Sbjct: 121 KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 173

[Close]

BLAST of Pay0002625 vs. ExPASy TrEMBL
Match: S6DEZ2 (Nuclear transcription factor Y subunit B-8-like OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.7e-88
Identity = 171/173 (98.84%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120
           CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYR  EGDT
Sbjct: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYR--EGDT 120

Query: 121 KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 174
           KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD
Sbjct: 121 KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 171

[Close]

BLAST of Pay0002625 vs. ExPASy TrEMBL
Match: A0A1S3B658 (nuclear transcription factor Y subunit B-1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486448 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.7e-88
Identity = 171/173 (98.84%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120
           CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYR  EGDT
Sbjct: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYR--EGDT 120

Query: 121 KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 174
           KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD
Sbjct: 121 KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 171

[Close]

BLAST of Pay0002625 vs. ExPASy TrEMBL
Match: A0A6J1KSG0 (nuclear transcription factor Y subunit B-1-like OS=Cucurbita maxima OX=3661 GN=LOC111498291 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 9.5e-87
Identity = 166/173 (95.95%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAPASPGGGSHESGE SPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEHSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120
           CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT
Sbjct: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120

Query: 121 KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 174
           KGSAKGGD SAKKEAHPTP  Q+AHQG+FSQGVNY SSQSQAQHLMVPMQGTD
Sbjct: 121 KGSAKGGDASAKKEAHPTPGAQVAHQGTFSQGVNYGSSQSQAQHLMVPMQGTD 173

[Close]

BLAST of Pay0002625 vs. NCBI nr
Match: XP_004137802.1 (nuclear transcription factor Y subunit B-1 isoform X1 [Cucumis sativus] >XP_008442637.1 PREDICTED: nuclear transcription factor Y subunit B-1 isoform X1 [Cucumis melo] >KGN58930.1 hypothetical protein Csa_002371 [Cucumis sativus])

HSP 1 Score: 344.0 bits (881), Expect = 7.7e-91
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120
           CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT
Sbjct: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120

Query: 121 KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 174
           KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD
Sbjct: 121 KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 173

[Close]

BLAST of Pay0002625 vs. NCBI nr
Match: NP_001295779.1 (nuclear transcription factor Y subunit B-1 [Cucumis sativus] >XP_008442638.1 PREDICTED: nuclear transcription factor Y subunit B-1 isoform X2 [Cucumis melo] >XP_011651935.1 nuclear transcription factor Y subunit B-1 isoform X2 [Cucumis sativus] >CDF47513.1 nuclear transcription factor Y subunit B-8-like [Cucumis sativus])

HSP 1 Score: 335.1 bits (858), Expect = 3.6e-88
Identity = 171/173 (98.84%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120
           CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYR  EGDT
Sbjct: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYR--EGDT 120

Query: 121 KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 174
           KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD
Sbjct: 121 KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 171

[Close]

BLAST of Pay0002625 vs. NCBI nr
Match: XP_038906090.1 (nuclear transcription factor Y subunit B-10-like isoform X1 [Benincasa hispida])

HSP 1 Score: 332.4 bits (851), Expect = 2.3e-87
Identity = 168/173 (97.11%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120
           CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT
Sbjct: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120

Query: 121 KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 174
           KGSAKGGD SAKKEAHPT I Q+AHQGSFSQGVNYASSQSQAQHLMVPMQGT+
Sbjct: 121 KGSAKGGDASAKKEAHPTSISQIAHQGSFSQGVNYASSQSQAQHLMVPMQGTE 173

[Close]

BLAST of Pay0002625 vs. NCBI nr
Match: XP_022948121.1 (nuclear transcription factor Y subunit B-1-like [Cucurbita moschata] >XP_022948130.1 nuclear transcription factor Y subunit B-1-like [Cucurbita moschata] >XP_023005187.1 nuclear transcription factor Y subunit B-1-like [Cucurbita maxima] >XP_023005188.1 nuclear transcription factor Y subunit B-1-like [Cucurbita maxima] >XP_023540646.1 nuclear transcription factor Y subunit B-1-like [Cucurbita pepo subsp. pepo] >XP_023540647.1 nuclear transcription factor Y subunit B-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 329.3 bits (843), Expect = 2.0e-86
Identity = 166/173 (95.95%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAPASPGGGSHESGE SPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEHSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120
           CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT
Sbjct: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120

Query: 121 KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 174
           KGSAKGGD SAKKEAHPTP  Q+AHQG+FSQGVNY SSQSQAQHLMVPMQGTD
Sbjct: 121 KGSAKGGDASAKKEAHPTPGAQVAHQGTFSQGVNYGSSQSQAQHLMVPMQGTD 173

[Close]

BLAST of Pay0002625 vs. NCBI nr
Match: XP_023529112.1 (nuclear transcription factor Y subunit B-1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023529113.1 nuclear transcription factor Y subunit B-1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 164/170 (96.47%), Postives = 167/170 (98.24%), Query Frame = 0


Query: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120
           CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT
Sbjct: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120

Query: 121 KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQ 171
           KGSAKGGD SAKKEAHPT +PQ+AH GSFSQGVNYA+SQSQAQHLMVPMQ
Sbjct: 121 KGSAKGGDASAKKEAHPTSVPQLAHGGSFSQGVNYATSQSQAQHLMVPMQ 170

[Close]

BLAST of Pay0002625 vs. TAIR 10
Match: AT3G53340.1 (nuclear factor Y, subunit B10 )

HSP 1 Score: 239.2 bits (609), Expect = 2.5e-63
Identity = 127/170 (74.71%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 9   GGGSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFI 68
           GGGSHES G+QSPRS NVREQDRFLPIANISRIMK+ LP NGKIAKDAKET+QECVSEFI
Sbjct: 10  GGGSHESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFI 69

Query: 69  SFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDTKGSAKG 128
           SF+TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLK YL +YRE EGDTKGS KG
Sbjct: 70  SFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGKG 129

Query: 129 GDGSAKKEAHPTPIPQMA---HQGSFSQGVNYASSQSQAQHLMVPMQGTD 174
           G+ SAK++  P+ + Q +    QGSFSQG       SQ  ++MV M GT+
Sbjct: 130 GESSAKRDGQPSQVSQFSQVPQQGSFSQG---PYGNSQGSNMMVQMPGTE 176

[Close]

BLAST of Pay0002625 vs. TAIR 10
Match: AT2G37060.1 (nuclear factor Y, subunit B8 )

HSP 1 Score: 238.8 bits (608), Expect = 3.2e-63
Identity = 134/180 (74.44%), Postives = 150/180 (83.33%), Query Frame = 0


Query: 1   MADAPA-SPGG-GSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKE 60
           MA++ A SPGG GSHES G+QSPRS +VREQDRFLPIANISRIMK+ LPANGKIAKDAKE
Sbjct: 1   MAESQAKSPGGCGSHESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKE 60

Query: 61  TVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRET 120
            VQECVSEFISF+TSEASDKCQREKRKTINGDDLLWAMATLGFEDY++PLK YL +YRE 
Sbjct: 61  IVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREM 120

Query: 121 EGDTKGSAKGGDGSAKKEAHPT---PIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 174
           EGDTKGSAKGGD +AKK+   +      Q+AHQG       Y +SQ+Q QH+MVPM GTD
Sbjct: 121 EGDTKGSAKGGDPNAKKDGQSSQNGQFSQLAHQGP------YGNSQAQ-QHMMVPMPGTD 173

[Close]

BLAST of Pay0002625 vs. TAIR 10
Match: AT2G37060.2 (nuclear factor Y, subunit B8 )

HSP 1 Score: 238.8 bits (608), Expect = 3.2e-63
Identity = 134/180 (74.44%), Postives = 150/180 (83.33%), Query Frame = 0


Query: 1   MADAPA-SPGG-GSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKE 60
           MA++ A SPGG GSHES G+QSPRS +VREQDRFLPIANISRIMK+ LPANGKIAKDAKE
Sbjct: 1   MAESQAKSPGGCGSHESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKE 60

Query: 61  TVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRET 120
            VQECVSEFISF+TSEASDKCQREKRKTINGDDLLWAMATLGFEDY++PLK YL +YRE 
Sbjct: 61  IVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREM 120

Query: 121 EGDTKGSAKGGDGSAKKEAHPT---PIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 174
           EGDTKGSAKGGD +AKK+   +      Q+AHQG       Y +SQ+Q QH+MVPM GTD
Sbjct: 121 EGDTKGSAKGGDPNAKKDGQSSQNGQFSQLAHQGP------YGNSQAQ-QHMMVPMPGTD 173

[Close]

BLAST of Pay0002625 vs. TAIR 10
Match: AT2G37060.3 (nuclear factor Y, subunit B8 )

HSP 1 Score: 238.8 bits (608), Expect = 3.2e-63
Identity = 134/180 (74.44%), Postives = 150/180 (83.33%), Query Frame = 0


Query: 1   MADAPA-SPGG-GSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKE 60
           MA++ A SPGG GSHES G+QSPRS +VREQDRFLPIANISRIMK+ LPANGKIAKDAKE
Sbjct: 1   MAESQAKSPGGCGSHESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKE 60

Query: 61  TVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRET 120
            VQECVSEFISF+TSEASDKCQREKRKTINGDDLLWAMATLGFEDY++PLK YL +YRE 
Sbjct: 61  IVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREM 120

Query: 121 EGDTKGSAKGGDGSAKKEAHPT---PIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 174
           EGDTKGSAKGGD +AKK+   +      Q+AHQG       Y +SQ+Q QH+MVPM GTD
Sbjct: 121 EGDTKGSAKGGDPNAKKDGQSSQNGQFSQLAHQGP------YGNSQAQ-QHMMVPMPGTD 173

[Close]

BLAST of Pay0002625 vs. TAIR 10
Match: AT2G38880.2 (nuclear factor Y, subunit B1 )

HSP 1 Score: 204.1 bits (518), Expect = 8.8e-53
Identity = 102/130 (78.46%), Postives = 111/130 (85.38%), Query Frame = 0


Query: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MAD P+SP G   ESG      +VREQDR+LPIANISRIMKKALP NGKI KDAK+TVQE
Sbjct: 1   MADTPSSPAGDGGESG-----GSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQE 60

Query: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120
           CVSEFISFITSEASDKCQ+EKRKT+NGDDLLWAMATLGFEDY++PLK YL +YRE EGD 
Sbjct: 61  CVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDN 120

Query: 121 KGSAKGGDGS 131
           KGS K GDGS
Sbjct: 121 KGSGKSGDGS 125

The following BLAST results are available for this feature:

BLAST of Pay0002625 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67XJ2	3.5e-62	74.71	Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana OX=3702 GN=N...	[more]
Q8VYK4	4.6e-62	74.44	Nuclear transcription factor Y subunit B-8 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
P25209	3.1e-58	72.67	Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1	[more]
Q60EQ4	1.7e-56	68.72	Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9SLG0	1.2e-51	78.46	Nuclear transcription factor Y subunit B-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Pay0002625 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAB9	3.7e-91	100.00	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G7367...	[more]
A0A1S3B5N5	3.7e-91	100.00	nuclear transcription factor Y subunit B-1 isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
S6DEZ2	1.7e-88	98.84	Nuclear transcription factor Y subunit B-8-like OS=Cucumis sativus OX=3659 PE=2 ...	[more]
A0A1S3B658	1.7e-88	98.84	nuclear transcription factor Y subunit B-1 isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1KSG0	9.5e-87	95.95	nuclear transcription factor Y subunit B-1-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Pay0002625 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137802.1	7.7e-91	100.00	nuclear transcription factor Y subunit B-1 isoform X1 [Cucumis sativus] >XP_0084...	[more]
NP_001295779.1	3.6e-88	98.84	nuclear transcription factor Y subunit B-1 [Cucumis sativus] >XP_008442638.1 PRE...	[more]
XP_038906090.1	2.3e-87	97.11	nuclear transcription factor Y subunit B-10-like isoform X1 [Benincasa hispida]	[more]
XP_022948121.1	2.0e-86	95.95	nuclear transcription factor Y subunit B-1-like [Cucurbita moschata] >XP_0229481...	[more]
XP_023529112.1	1.3e-85	96.47	nuclear transcription factor Y subunit B-1-like isoform X1 [Cucurbita pepo subsp...	[more]

BLAST of Pay0002625 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53340.1	2.5e-63	74.71	nuclear factor Y, subunit B10	[more]
AT2G37060.1	3.2e-63	74.44	nuclear factor Y, subunit B8	[more]
AT2G37060.2	3.2e-63	74.44	nuclear factor Y, subunit B8	[more]
AT2G37060.3	3.2e-63	74.44	nuclear factor Y, subunit B8	[more]
AT2G38880.2	8.8e-53	78.46	nuclear factor Y, subunit B1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 77..95 score: 39.35 coord: 96..114 score: 40.31 coord: 58..76 score: 54.07
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..173
None	No IPR available	PANTHER	PTHR11064:SF134	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED	coord: 1..158
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 17..162 e-value: 4.2E-48 score: 164.7
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 27..135
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 30..94 e-value: 7.7E-28 score: 96.6
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 1..158
IPR003956	Transcription factor, NFYB/HAP3, conserved site	PROSITE	PS00685	NFYB_HAP3	coord: 61..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0002625.2	Pay0002625.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding