Pay0002019 (gene) Melon (Payzawat) v1

Overview


Name	Pay0002019
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	18S rRNA aminocarboxypropyltransferase
Location	chr07: 25797180 .. 25803278 (-)
RNA-Seq Expression	Pay0002019
Synteny	Pay0002019

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCATAACAAGCCTAGACGCTTCAAAAATCATCATCCTCGTCGTGGACAATCTACTCGAGGCCATAAATTTATTGGGTAATTGCATATACACTTGCCATTTTCCTCTGATTCGTCTTTTCAATATATCGCTCATTTGTTTTGGTTTTTCTTTTTTCAGAGAAGATGAATTCTTGCCAGTCGACCCAGGTGCCTACTTTGTCTCACTGAAGTTTGTTTCTATATGGGTGATTTTGCTGTAATTAAAGAAGCCCTTTTATAGTGAAGGGACTTCGGATTTAGGTTCTTGACGAGTTCCTTTCTGTTACAGCTAATGAAGAGGAGCCAACGCGTCCAAATATTCAGCTTGCCATGTGGGTGTGTGCTTAACTTTTATTTTTTCCTTCGCGTTTTTGTTGTTGAATTCTGAATTATGTCATACTTAAACTTGTTGCTGTTGTGTTGTTGTTACGAATGGGAATGAAAGCTTGAGCTTACAAAGTTGTATGTAACTTGAAATTGATGGTGTTTTGTGGTTGATTCAGGATTTTGGGCAGTGTGATGCAAAAAGGTGTACAGGACGCAAGCTTGCACGATTTGGGTTGTTAAAAGAACGTACCTAATTCTCTCCTTTTCTTTTGTTTTCATTTTTTTTTACTATGTTGCTTATTTGTGCATTGATTGGTTCGTGTAGTCATATAAAGAAAACCACTTTAGTTCTCTAATAGGATTAATTAGTTTGTATGTTTGCATTCCCTCTTCACTTCGTTAGTGATTGTACAAAATGTATTGTTGGATGTATTGACTTAGTTCAATACGATCTTGCTGGGAATTTTGAAGATGCATTCACGTGTGATGATTAGTATCAATATGAATTTGATGCTTAGGGAACACAAATGGAAGTCTATAGAAAAATAAGTTATATTGTGTTTAGATGCTGGAGAAAATCTAATGGATGGTTTTGTTTCCCAAGTGGAGAATGTCCAAAACGATGAACTTTCCAAATGTGTAATCCTAATTTCTTAGTTTGGTCATACAATGCTTTATAAAAGTACAACTTGGACGTCAGAATCCTTGAAACTCTCGACATTCATGGCTTTCAATTGTAAACCAATAAATCGGGTTTAAACTATAGAAGTTGAAAAACAGGGACCAAATAGAAATAGTAAAAACTAAGGAACAAAAAAACAGTTTTTTTAATTATTTCTAAGTTGCTTCATCAAATGAGGCTGGATGGTTTCAAATTTGTATGGTAAATCTGATCCATGCTCATTTAAGGTTTAGTTAGATGGTATTGTGTATGAAATACTATTAATGGATTTCTTTCTACATTGAATAAAGAGTGAATCTAACTTCTCTTGAGTTCATGCAGGATTTGCGTGTTAACAGTGGGTTTGGAGGCATTGTCTTAAGGTACTGAACAATCTTGCTTCCTTGTTTACTAGTTTAGTTGTAAATGAACGTTAGTGTATGATAATACGATCACAAGCAAGTTGTGTCATCACATCTCTAACTAAATAACGTCCAAAGGCATCTAACTTTCAGTTGCGAGAATCAACACTATGCTCCACTTTTTCATCAATAAAGCATGAAGAGCTGCTCATATTCAGAATTTCAGCCTCTTTCGTCTTTCCAAAAGCCTAATGAGTGAAACTCCCATGACAAAATCACACAATCCCAATGAAAAAAACAGACCCATTTGGTAAAGAAGCAAACCTTTTGTGGTTCAACCGGTAGGAAAATGATGATTAGGTCATCTTGAAATACTTAAGACTCCACAAATGCGTCAAAGGCTTTTACAATAATTATGAATGTATAGGATCCGGCCATAGAAATCTTCTTTTATATAATGAGAAGGAATGTATTAGATATCCATCAAGCACATGATAGACCTCCAATAGTATTTCAATAGGAAGAAGGTTTAGTACAAGTGGCAGAATTGTAATAAAAGACAGATTGTAGTAGTCTGTTAGTAGTCCGTTATGCTTTAGTAGGTCGGTGTGAGCTTGTATAAATAGAGAAGTTTGGGCGGGAAAAGGTTTTCATGGGAAATTTGAGAAGTTAGTTGGCTTGTACTTCTTGAGAGGAAGAAGACAAGAGTGCCCTAGATATTGAATTGAGTGAAACTCAATTCAATTTACATTGTAATCGTTTTCTATTTCATCAATAAAGTACAGAATCAATTTCGATTAGTTCGGTATCTACCAGAACACTCTATGATGTTGCTTTGAAGAAAAACCCATTTGAGTGTTTCTTTAACTGACACCTTATTCTCAACCCACATGAACAAGATGCCACCTGTTTTTGAAGAGAATCCTCAAAGGATCAGCCTACAACTTTAAAGCTTCAAAATAATTTTTACTCCAGGTGAAACTGCCACAACCATCCGGATGATGAGATTGAGGAAATCTTTTCATAACTGAGAAGAAGTAACAAACAACAATCACTACTGATAATTGAGAAGAACTAACCCCTAAACTTAAGCCACAACTTTCAACTAAGGAGGAGAATTTAGATGGGATTATAGATAGATCAACCAAGGAAAACTTACTTTTAGGAGTCTGAATAGATTTTCTTTCCATTGGATTTTGGAATAAACTTGCTAAAACTTCACCAAAATTATCATCAATTGAGAATTCTTCTGAATTAGAATTTGTAACAGATCTTTGTAGCCAAATGGTTGTGGTGGTTTCACCTAGAGTAAAAAAGAAGCGCCCTTTGATAGACAACCGAAAGGGTATATTTTTCTTTCCTAAATGGGTGGCCCAGAGAGAAGCCCCTTTTGATAGACAACCTAAGGGTATATCTTTCATCCCTAAAGGGGTGGCCCTGATAAATACAAACCAGAAAGTCATGGACAAGCTGGGAGATCATGGACCATCTAAAGGCTTCTATCACAAAACCCTAGTAGTTATAAGAAAAAAGAGGGAAAATGTAAAGACGTTATGAGATTCTGATCTTTTACGAAGAAGACTGGCTAGAGTAGAGCTATTCGTTATTGTGGTCTATGAGCAAGCTAAGACTTTGATTTGTTACTACCTTTGCCCATTTCATAACGCAATTTGGGGAATATTTTTTTAATAATGAAGTAACTGATCTTTATTGGGATATAGTGAGGGTCTCACTCGTCACCTAGGGGTGTAATTTATTGAAGGGTGGGAAAGGTGCAAGCTCAGTGCAGTATGTTCTAACTTGTAACTGATGGGACCTTCAATCAAGTAAGAGTATTATTACTGATTAAACTCTATTACAGAAAGTGATTCTTCTCTCTTGGTTATTCTGTCTTTCAAGAATGAATCAAAGAACTCTACAGGAAATTCCACACCTATTCCTTTAGACTAAGGTGCTATTTAAACTACTCTTGCCTAACTAACTTCTAACTGACTTTCATAACCGACTCTTCTAACAGATTTCCTTAACAGACTTACCAGACTTATCCGTTTATTGGCTTTTCTTTCTTCTTCTGCTGTATTGTTGGATAATAGGGGGTCTATCAGTAACTTGCAAGTAAAGACTGCACGTAAGAGTTATTTCTTCTGGGTTAAGTTGGGTGTTTGAGAGAGGAAAGTTTTCAAGTTTTCCAAAAACTATGTACATCTCTTTACTCTATTGTCAATAACTGATTGTAGTAGATTGAAGGATTAGAAATATAACTATTGCTTTCCTTTTGGCTGTTTTCGCATTAGTTGTTACTTTATCAATCTTATTGTATGTGCTCCTGATGGTTGGCCATGATCTATCATATTGCTAACTATCCTTTTACAAGAACATGCTTTCATAATTTCTTCTGTGACCTGATGAAAGGAGATGAATGGTAGTGATTAAATTCATACTCAAAGGCATATAAACATTTTGTTGGTTCCTATATTGAACCTCTTCAATTTGAAAATTTTGGCAGTCCAGTGGGGGTGAATTGTGTCTCCAAAGAAGATCATAGTCTTCTTAAACAAAAAGGATTAGCAGTTGTGGATTGCTCATGGGCACGGTTGGGTGATGTTCCATTTGTGAAATTGCGATGTGCTGCTCCTCGCCTATGTAAGAGATTTACATCTTCAATATGATAGTCTTCTGTAGTTCTTAACCTTGCTGTCATTTGATTGTTAGTAATTTCTAAACTGCCATTGAGATTTCACTAAATTTGTTGAAGTGCATCCTGGCTAGACTCGATTTGGTTGGCTTTGGCAATTACTATACCATGGTTTTTTTCTCTTGGTTCTGGTTTTCACATTCTGCAAATTGTTTATGCAAATATTTGTAGTACCTTGGCTAGTAGCAGCAAACCCAGTAAATTATGGTCGACCATGTGAGTTATCTTGCGTGGAAGCATTAGCCGCCGCTCTAATCATATGGTAACGCACCTTTATCTCATCTCTTCTCTTGTGTGCAACTTTGTTCTAAATTCTGCTGAGATTCATGTCAATTACTAATCTCATGTCATCGTGTATCCTTTTGCCATAAATTTGGTGCTATTAGCTTACTTTGGATAATTCAGGGAAAATGATCTAAGATTTATAAGGTGTTGTACTTCTTTCATTGGAAGTGAGAGAATAACATACTGGCCTGCTTGATTGTTCAAATTTGGCAAATTGCTTCAGAGTAGTCTTATTAGTCACTTCACTTAGAACTCTGATGAAGTTTTTTGTATGGTTTTGTCAGTCCCTTTGGTTCTAATTAGTCACAAAGAAAATTTATTGTCGTTGCTGATGTTGTGACTAACAAAGTTGTAGATCTCCAGTAGTAACCCACTAATCCTCCTTTAGCAACCTAAGACTTCCAGAGACTGTCAATACAATATAATTTGTGGTAATTGTTAATGTTAACACTCTGCTTATCACTTTTTTAATGGATGTTTAAACTACTTTATAGCTGGAAATAGAAATATGATTATTTATTTGTTGGTGTAGTTGAGCAAGCAATCTGTTCATTTTGTTTAACTATCTCTATTGAACTGAACTAACAGTGGGGAAGGGGAAACAGCAGATCTGTTGCTTAGTAAATTCAAGTGGGGCCATGCTTTTCTTTCCGTTAATAGGTATGTTTTATTATTTAACTATTAAATTTTTAATTCTAAAAACAAACACGATATAATATGCTGGTTCATCCATAATAATTGCAGCCTACTTGCATCAAATGAAGATTAAAAGGCTTGTTTAGAAATGATTAAGGGCTTCAAAACACTTCATTTAAAAAGTTGTTCCAAAACGGCACTCACTTATCATATTCTAAATGACCTGCCTTTTAGCTCACAATGGCCTGAGATATTTGATACTAAATTACAAATTTAGCGCCATTTAGCCTTCAAGTATGTAGAGAAATTTTAGGCTTATAAATGGCGCTATTATTTGAGCTCTTCCCATGACCATGCTTGCTTATTTTTCTTTTGTATTACACAGAGAACTTCTAAAACAATACTCAGCATGTGAGAATAGTGCTGATATTATTTCGGTCCAGAATGCTTGGTTATCGCAACAACGACAAGTCCCAAAAGAACCGCATAATGTCGAAGGTAATCTTTTGAATCAATTACACTGATCTCATGTTTGTTTTGCACCTTAGTTTGAAGAAAATGGAATTGCATCATACTCTCTATATGTGTGGAGAAAATGTTGCTGAAGTACTTTGAGTTTATATCCACTGGTTATTAGGAAAATGTAGATTTTCAAGTTCACATCCAACTGTTTGGAAGAGACAATGACATTGTGATAGTCATGTTGAAGAAATTTTTTGTGTCCATAATTATAAACATTAACCTTACTGACAAGAGTCAGCAACCAAGCCGATCAAAATCAAACCAAATTGACTCTAATCAACATTATCCAACCAAAATAAACAGATAGACTGTTTTTGGGAGTTTACATTTATGAAAACCGAACCAATTTGGGCTAAATCAATGAAGTAAAGGCCCTTTTGATTTGGGACTAGAGTTGTTTTCCAGCCATGGGAAGGACTTGTGAAGGTTTCATTCAAACGAGACTGTCTTTATGTTGTAGGTGCAGATAAGTCGTCTGTGAGCGAACATGACGAGGATTCCGATGATTCAGAAGATGGACTTCCACCATTGGAGAAGAATCTAAATCACTTGACCTTGCAGCAAGAAAGCGATGAAGAGAGTGAGTAA

mRNA sequence

ATGAGCCATAACAAGCCTAGACGCTTCAAAAATCATCATCCTCGTCGTGGACAATCTACTCGAGGCCATAAATTTATTGGAGAAGATGAATTCTTGCCAGTCGACCCAGCTAATGAAGAGGAGCCAACGCGTCCAAATATTCAGCTTGCCATGTGGGATTTTGGGCAGTGTGATGCAAAAAGGTGTACAGGACGCAAGCTTGCACGATTTGGGTTGTTAAAAGAACTGAATCTAACTTCTCTTGAGTTCATGCAGGATTTGCGTGTTAACAGTGGGTTTGGAGGCATTGTCTTAAGTCCAGTGGGGGTGAATTGTGTCTCCAAAGAAGATCATAGTCTTCTTAAACAAAAAGGATTAGCAGTTGTGGATTGCTCATGGGCACGGTTGGGTGATGTTCCATTTGTGAAATTGCGATGTGCTGCTCCTCGCCTATTACCTTGGCTAGTAGCAGCAAACCCAGTAAATTATGGTCGACCATGTGAGTTATCTTGCGTGGAAGCATTAGCCGCCGCTCTAATCATATGTGGGGAAGGGGAAACAGCAGATCTGTTGCTTAGTAAATTCAAGTGGGGCCATGCTTTTCTTTCCGTTAATAGAGAACTTCTAAAACAATACTCAGCATGTGAGAATAGTGCTGATATTATTTCGGTCCAGAATGCTTGGTTATCGCAACAACGACAAGTCCCAAAAGAACCGCATAATGTCGAAGGTGCAGATAAGTCGTCTGTGAGCGAACATGACGAGGATTCCGATGATTCAGAAGATGGACTTCCACCATTGGAGAAGAATCTAAATCACTTGACCTTGCAGCAAGAAAGCGATGAAGAGAGTGAGTAA

Coding sequence (CDS)

ATGAGCCATAACAAGCCTAGACGCTTCAAAAATCATCATCCTCGTCGTGGACAATCTACTCGAGGCCATAAATTTATTGGAGAAGATGAATTCTTGCCAGTCGACCCAGCTAATGAAGAGGAGCCAACGCGTCCAAATATTCAGCTTGCCATGTGGGATTTTGGGCAGTGTGATGCAAAAAGGTGTACAGGACGCAAGCTTGCACGATTTGGGTTGTTAAAAGAACTGAATCTAACTTCTCTTGAGTTCATGCAGGATTTGCGTGTTAACAGTGGGTTTGGAGGCATTGTCTTAAGTCCAGTGGGGGTGAATTGTGTCTCCAAAGAAGATCATAGTCTTCTTAAACAAAAAGGATTAGCAGTTGTGGATTGCTCATGGGCACGGTTGGGTGATGTTCCATTTGTGAAATTGCGATGTGCTGCTCCTCGCCTATTACCTTGGCTAGTAGCAGCAAACCCAGTAAATTATGGTCGACCATGTGAGTTATCTTGCGTGGAAGCATTAGCCGCCGCTCTAATCATATGTGGGGAAGGGGAAACAGCAGATCTGTTGCTTAGTAAATTCAAGTGGGGCCATGCTTTTCTTTCCGTTAATAGAGAACTTCTAAAACAATACTCAGCATGTGAGAATAGTGCTGATATTATTTCGGTCCAGAATGCTTGGTTATCGCAACAACGACAAGTCCCAAAAGAACCGCATAATGTCGAAGGTGCAGATAAGTCGTCTGTGAGCGAACATGACGAGGATTCCGATGATTCAGAAGATGGACTTCCACCATTGGAGAAGAATCTAAATCACTTGACCTTGCAGCAAGAAAGCGATGAAGAGAGTGAGTAA

Protein sequence

MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAKRCTGRKLARFGLLKELNLTSLEFMQDLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLAVVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGETADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADKSSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE

Homology

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BLAST of Pay0002019 vs. ExPASy Swiss-Prot
Match: Q5HZH2 (18S rRNA aminocarboxypropyltransferase OS=Mus musculus OX=10090 GN=Tsr3 PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 6.9e-52
Identity = 108/230 (46.96%), Postives = 138/230 (60.00%), Query Frame = 0


Query: 49  LAMWDFGQCDAKRCTGRKLARFGLLKELNLTSLEFMQDLRVNSGFGGIVLSPVGVNCVSK 108
           LAMW+ G CD KRCTGRKLAR GL++            LR++  FGG+VLSPVG   VS 
Sbjct: 60  LAMWELGHCDPKRCTGRKLARLGLVR-----------CLRLSQRFGGLVLSPVGTEYVSP 119

Query: 109 EDHSLLKQKGLAVVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEAL 168
            D  L+ Q G+AV+DCSWA+L D PF K+R +  RLLP+LVAANPVNYGRPC+LSCVEA 
Sbjct: 120 ADRQLVAQSGVAVIDCSWAKLDDTPFQKMRGSHLRLLPYLVAANPVNYGRPCKLSCVEAF 179

Query: 169 AAALIICGEGETADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQV 228
           AAA  I G  + A +LL KFKWG  FL +NRELL +Y+AC    +++  +  +L+  R  
Sbjct: 180 AAAFCIVGFSDLAVILLRKFKWGKGFLDLNRELLDKYAACRGPEEVLQAEQGYLASTRDT 239

Query: 229 PKE---PHNVEGA--------------------DKSSVSEHDEDSDDSED 256
           P+E   P +V+                      D     EH EDS++  D
Sbjct: 240 PEEDIDPFDVDSGREFVNLNRPVASTRLPEDMDDTDGSEEHSEDSEEDSD 278

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BLAST of Pay0002019 vs. ExPASy Swiss-Prot
Match: Q9UJK0 (18S rRNA aminocarboxypropyltransferase OS=Homo sapiens OX=9606 GN=TSR3 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.0e-47
Identity = 103/228 (45.18%), Postives = 139/228 (60.96%), Query Frame = 0


Query: 49  LAMWDFGQCDAKRCTGRKLARFGLLKELNLTSLEFMQDLRVNSGFGGIVLSPVGVNCVSK 108
           LAMW+ G CD +RCTGRKLAR GL++            LR+   FGG+VLSPVG    S 
Sbjct: 60  LAMWELGHCDPRRCTGRKLARLGLVR-----------CLRLGHRFGGLVLSPVGKQYASP 119

Query: 109 EDHSLLKQKGLAVVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEAL 168
            D  L+ Q G+AV+DCSWARL + PF K+R +  RLLP+LVAANPVNYGRP  LSCVEA 
Sbjct: 120 ADRQLVAQSGVAVIDCSWARLDETPFGKMRGSHLRLLPYLVAANPVNYGRPYRLSCVEAF 179

Query: 169 AAALIICGEGETADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQV 228
           AA   I G  + A +LL KFKWG  FL +NR+LL +Y+AC +  +++  +  +L+  ++ 
Sbjct: 180 AATFCIVGFPDLAVILLRKFKWGKGFLDLNRQLLDKYAACGSPEEVLQAEQEFLANAKES 239

Query: 229 PKE----PHNVEGADK----------SSVSEHDEDSDDSEDGLPPLEK 263
           P+E    P +V+   +          + +    +DSD SED  P  E+
Sbjct: 240 PQEEEIDPFDVDSGREFGNPNRPVASTRLPSDTDDSDASEDPGPGAER 276

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BLAST of Pay0002019 vs. ExPASy Swiss-Prot
Match: Q12094 (18S rRNA aminocarboxypropyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TSR3 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.8e-42
Identity = 106/266 (39.85%), Postives = 144/266 (54.14%), Query Frame = 0


Query: 4   NKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAKRCT 63
           NK    KN  P+RG    GH        + +   N E+   P ++LAMWDF  CD KRC+
Sbjct: 6   NKMHEPKNGRPQRG--ANGHSSRQNHRRMEMKYDNSEKMKFP-VKLAMWDFDHCDPKRCS 65

Query: 64  GRKLARFGLLKELNLTSLEFMQDLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLAVVD 123
           G+KL R GL+K            LRV   F GIV+SP G   V  +D  +++Q G +VV+
Sbjct: 66  GKKLERLGLIK-----------SLRVGQKFQGIVVSPNGKGVVCPDDLEIVEQHGASVVE 125

Query: 124 CSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGETADL 183
           CSWARL +VPF K+     RLLP+LVAAN VNYGRP  L+CVEALAA   I G  + A  
Sbjct: 126 CSWARLEEVPFNKIGGKHERLLPYLVAANQVNYGRPWRLNCVEALAACFAIVGRMDWASE 185

Query: 184 LLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWL------SQQRQVPKEPHNV-- 243
           LLS F WG  FL +N+ELL+ Y  C +   +   +  WL      +Q+R+   +  ++  
Sbjct: 186 LLSHFSWGMGFLELNKELLEIYQQCTDCDSVKRAEEEWLQKLEKETQERKSRAKEEDIWM 245

Query: 244 -------EGADKSSVSEHDEDSDDSE 255
                      +S  SE +E+S+ S+
Sbjct: 246 MGNINRRGNGSQSDTSESEENSEQSD 257

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BLAST of Pay0002019 vs. ExPASy Swiss-Prot
Match: Q10409 (18S rRNA aminocarboxypropyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tsr3 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 8.1e-37
Identity = 89/244 (36.48%), Postives = 128/244 (52.46%), Query Frame = 0


Query: 47  IQLAMWDFGQCDAKRCTGRKLARFGLLKELNLTSLEFMQDLRVNSGFGGIVLSPVGVNCV 106
           + LAMWDFG C+   C+G++L R G ++           +LR+   F G+V++P G   V
Sbjct: 27  LPLAMWDFGHCNPNACSGKRLERLGCVR-----------NLRIGQKFRGVVITPNGKVPV 86

Query: 107 SKEDHSLLKQKGLAVVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVE 166
           S  D       G +VV+CSWAR+ ++PF ++     RLLP+LVA+NPVNYGRP  L+C E
Sbjct: 87  SPADKEYFDNGGASVVECSWARIEEIPFSRIGGRCERLLPYLVASNPVNYGRPWRLNCAE 146

Query: 167 ALAAALIICGEGETADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQR 226
           ALAA + I G    A LL+  FKWGH+F  VN ELL  Y+ C ++ DI   +  +L +  
Sbjct: 147 ALAACMYIVGYPNEARLLMDNFKWGHSFFEVNEELLDIYAQCHDAQDIQEKEKKYLEEME 206

Query: 227 QVPKEPHNVEGAD---------KSSVSEHDEDSDDSEDGLP---PLEKNLNHLTLQQESD 279
              +E  N    D         K +++     S+  E   P   P E +L H      +D
Sbjct: 207 ASYQEQRNQTTDDIWSAGNLNHKPTLNTSSTHSNSEESRSPLHEPSEASLAHDEHSIPTD 259

[Close]

BLAST of Pay0002019 vs. ExPASy Swiss-Prot
Match: Q8PSK5 (16S rRNA aminocarboxypropyltransferase OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) OX=192952 GN=MM_3074 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.5e-30
Identity = 71/178 (39.89%), Postives = 107/178 (60.11%), Query Frame = 0


Query: 46  NIQLAMWDFGQCDAKRCTGRKLARFGLLKELNLTSLEFMQDLRVNSGFGGIVLSPVGVNC 105
           +I L ++  GQCD K+CTGRK+ARF L +         + D         I+L P+    
Sbjct: 8   DIPLYIYHAGQCDPKKCTGRKMARFELAR---------LYDRISRLPRSAILLDPMAEKA 67

Query: 106 VSKEDHSLLKQKGLAVVDCSWARLGDV-PFVKLRCAAPRLLPWLVAANPVNYGRPCELSC 165
           +S  D     +KG+ V+DCSW  +  V P ++      R LP+++A NPVN+GRP +L+ 
Sbjct: 68  LSPADD---PKKGIIVLDCSWEEVERVFPELEKLNLEHRALPYMLAGNPVNFGRPFKLNS 127

Query: 166 VEALAAALIICGEGETADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWL 223
            EA AAAL I G  E A+ ++SKF WGH+FL +NRE L++YS  +NS +I+ +Q+ ++
Sbjct: 128 AEAFAAALYILGYKEQAEKVMSKFNWGHSFLELNREPLEEYSTAKNSTEIVEIQSHYI 173

[Close]

BLAST of Pay0002019 vs. ExPASy TrEMBL
Match: A0A1S3BX27 (18S rRNA aminocarboxypropyltransferase OS=Cucumis melo OX=3656 GN=LOC103494403 PE=3 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 1.7e-149
Identity = 267/278 (96.04%), Postives = 267/278 (96.04%), Query Frame = 0


Query: 1   MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAK 60
           MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAK
Sbjct: 1   MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAK 60

Query: 61  RCTGRKLARFGLLKELNLTSLEFMQDLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA 120
           RCTGRKLARFGLLK           DLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA
Sbjct: 61  RCTGRKLARFGLLK-----------DLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA 120

Query: 121 VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET 180
           VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET
Sbjct: 121 VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET 180

Query: 181 ADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADK 240
           ADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADK
Sbjct: 181 ADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADK 240

Query: 241 SSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE 279
           SSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE
Sbjct: 241 SSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE 267

[Close]

BLAST of Pay0002019 vs. ExPASy TrEMBL
Match: A0A1S3BXV8 (18S rRNA aminocarboxypropyltransferase OS=Cucumis melo OX=3656 GN=LOC103494403 PE=3 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 7.7e-147
Identity = 265/278 (95.32%), Postives = 265/278 (95.32%), Query Frame = 0


Query: 1   MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAK 60
           MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAK
Sbjct: 1   MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAK 60

Query: 61  RCTGRKLARFGLLKELNLTSLEFMQDLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA 120
           RCTGRKLARFGLLK           DLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA
Sbjct: 61  RCTGRKLARFGLLK-----------DLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA 120

Query: 121 VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET 180
           VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET
Sbjct: 121 VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET 180

Query: 181 ADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADK 240
           ADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVE  DK
Sbjct: 181 ADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVE--DK 240

Query: 241 SSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE 279
           SSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE
Sbjct: 241 SSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE 265

[Close]

BLAST of Pay0002019 vs. ExPASy TrEMBL
Match: A0A0A0KXU5 (18S rRNA aminocarboxypropyltransferase OS=Cucumis sativus OX=3659 GN=Csa_4G031030 PE=3 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 1.9e-145
Identity = 265/293 (90.44%), Postives = 268/293 (91.47%), Query Frame = 0


Query: 1   MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAK 60
           MSHNK RRFKNHHPRRGQSTRGHKFIGEDE LPVDPANEEEPTRPNI LAMWDFGQCDAK
Sbjct: 94  MSHNKTRRFKNHHPRRGQSTRGHKFIGEDECLPVDPANEEEPTRPNIHLAMWDFGQCDAK 153

Query: 61  RCTGRKLARFGLLKE--------------LNLTSLEFMQ-DLRVNSGFGGIVLSPVGVNC 120
           RCTGRKLARFGLLKE               N+ + E  + DLRVNSGFGGIVLSPVGVNC
Sbjct: 154 RCTGRKLARFGLLKEHAGENLMDGFASQVENVQNEELSKCDLRVNSGFGGIVLSPVGVNC 213

Query: 121 VSKEDHSLLKQKGLAVVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCV 180
           VSKEDHSLLKQKGLAVVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCV
Sbjct: 214 VSKEDHSLLKQKGLAVVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCV 273

Query: 181 EALAAALIICGEGETADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQ 240
           EALAAALIICGEGETADLLL KFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQ
Sbjct: 274 EALAAALIICGEGETADLLLGKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQ 333

Query: 241 RQVPKEPHNVEGADKSSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE 279
           RQVPKEPHNVEGADKSSVSEHDE SDDSEDGLPPLEKNLNHLTLQQESDEESE
Sbjct: 334 RQVPKEPHNVEGADKSSVSEHDEGSDDSEDGLPPLEKNLNHLTLQQESDEESE 386

[Close]

BLAST of Pay0002019 vs. ExPASy TrEMBL
Match: A0A6J1J6L0 (18S rRNA aminocarboxypropyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111483038 PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 5.0e-138
Identity = 250/278 (89.93%), Postives = 255/278 (91.73%), Query Frame = 0


Query: 1   MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAK 60
           MSHNKPRRFKNHHPRRGQS+RGHKFIGEDE LP+DP NEEE   P IQLAMWDFGQCDAK
Sbjct: 1   MSHNKPRRFKNHHPRRGQSSRGHKFIGEDECLPIDPDNEEELAVPKIQLAMWDFGQCDAK 60

Query: 61  RCTGRKLARFGLLKELNLTSLEFMQDLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA 120
           RCTGRKLARFGLLK           DLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQ+GLA
Sbjct: 61  RCTGRKLARFGLLK-----------DLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQRGLA 120

Query: 121 VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET 180
           VVDCSWARLGDVPFVKLRC APRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET
Sbjct: 121 VVDCSWARLGDVPFVKLRCGAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET 180

Query: 181 ADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADK 240
           ADLLL KFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEP  VEGA+K
Sbjct: 181 ADLLLGKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPRIVEGAEK 240

Query: 241 SSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE 279
           SSVSE DE SDDSEDGLPPLEKNLNHLTLQQ+SDEESE
Sbjct: 241 SSVSEDDEGSDDSEDGLPPLEKNLNHLTLQQDSDEESE 267

[Close]

BLAST of Pay0002019 vs. ExPASy TrEMBL
Match: A0A6J1ETU0 (18S rRNA aminocarboxypropyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111435889 PE=3 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.5e-137
Identity = 248/278 (89.21%), Postives = 255/278 (91.73%), Query Frame = 0


Query: 1   MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAK 60
           MSHNKPRRFKNHHPRRGQS+RGHKFIGEDE LP+DP NEEE   P IQLAMWDFGQCDAK
Sbjct: 1   MSHNKPRRFKNHHPRRGQSSRGHKFIGEDECLPIDPDNEEELAVPKIQLAMWDFGQCDAK 60

Query: 61  RCTGRKLARFGLLKELNLTSLEFMQDLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA 120
           RCTGRKLARFGLLK           DLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQ+GLA
Sbjct: 61  RCTGRKLARFGLLK-----------DLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQRGLA 120

Query: 121 VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET 180
           VVDCSWARLGDVPFVKLRC APRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET
Sbjct: 121 VVDCSWARLGDVPFVKLRCGAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET 180

Query: 181 ADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADK 240
           ADLLL KFKWGHAFLSVNRELLKQYSACENSADIISVQN+WLSQQRQVPKEP  +EGA+K
Sbjct: 181 ADLLLGKFKWGHAFLSVNRELLKQYSACENSADIISVQNSWLSQQRQVPKEPRVLEGAEK 240

Query: 241 SSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE 279
           SSVSE DE SDDSEDGLPPLEKNLNHLTLQQ+SDEESE
Sbjct: 241 SSVSEDDEGSDDSEDGLPPLEKNLNHLTLQQDSDEESE 267

[Close]

BLAST of Pay0002019 vs. NCBI nr
Match: XP_008453772.1 (PREDICTED: ribosome biogenesis protein TSR3 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 538.5 bits (1386), Expect = 3.4e-149
Identity = 267/278 (96.04%), Postives = 267/278 (96.04%), Query Frame = 0


Query: 1   MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAK 60
           MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAK
Sbjct: 1   MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAK 60

Query: 61  RCTGRKLARFGLLKELNLTSLEFMQDLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA 120
           RCTGRKLARFGLLK           DLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA
Sbjct: 61  RCTGRKLARFGLLK-----------DLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA 120

Query: 121 VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET 180
           VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET
Sbjct: 121 VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET 180

Query: 181 ADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADK 240
           ADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADK
Sbjct: 181 ADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADK 240

Query: 241 SSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE 279
           SSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE
Sbjct: 241 SSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE 267

[Close]

BLAST of Pay0002019 vs. NCBI nr
Match: XP_008453773.1 (PREDICTED: ribosome biogenesis protein TSR3 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 529.6 bits (1363), Expect = 1.6e-146
Identity = 265/278 (95.32%), Postives = 265/278 (95.32%), Query Frame = 0


Query: 1   MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAK 60
           MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAK
Sbjct: 1   MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAK 60

Query: 61  RCTGRKLARFGLLKELNLTSLEFMQDLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA 120
           RCTGRKLARFGLLK           DLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA
Sbjct: 61  RCTGRKLARFGLLK-----------DLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA 120

Query: 121 VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET 180
           VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET
Sbjct: 121 VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET 180

Query: 181 ADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADK 240
           ADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVE  DK
Sbjct: 181 ADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVE--DK 240

Query: 241 SSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE 279
           SSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE
Sbjct: 241 SSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE 265

[Close]

BLAST of Pay0002019 vs. NCBI nr
Match: XP_011653126.1 (ribosome biogenesis protein TSR3 homolog isoform X1 [Cucumis sativus] >XP_031745814.1 ribosome biogenesis protein TSR3 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 526.2 bits (1354), Expect = 1.8e-145
Identity = 262/278 (94.24%), Postives = 262/278 (94.24%), Query Frame = 0


Query: 1   MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAK 60
           MSHNK RRFKNHHPRRGQSTRGHKFIGEDE LPVDPANEEEPTRPNI LAMWDFGQCDAK
Sbjct: 1   MSHNKTRRFKNHHPRRGQSTRGHKFIGEDECLPVDPANEEEPTRPNIHLAMWDFGQCDAK 60

Query: 61  RCTGRKLARFGLLKELNLTSLEFMQDLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA 120
           RCTGRKLARFGLLK           DLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA
Sbjct: 61  RCTGRKLARFGLLK-----------DLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA 120

Query: 121 VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET 180
           VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET
Sbjct: 121 VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET 180

Query: 181 ADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADK 240
           ADLLL KFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADK
Sbjct: 181 ADLLLGKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADK 240

Query: 241 SSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE 279
           SSVSEHDE SDDSEDGLPPLEKNLNHLTLQQESDEESE
Sbjct: 241 SSVSEHDEGSDDSEDGLPPLEKNLNHLTLQQESDEESE 267

[Close]

BLAST of Pay0002019 vs. NCBI nr
Match: XP_031740208.1 (LOW QUALITY PROTEIN: ribosome biogenesis protein TSR3 homolog [Cucumis sativus])

HSP 1 Score: 524.6 bits (1350), Expect = 5.1e-145
Identity = 261/278 (93.88%), Postives = 262/278 (94.24%), Query Frame = 0


Query: 1   MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAK 60
           MSHNK RRFKNHHPRRGQSTRGHKFIGEDE LPVDPANEEEPTRPNI LAMWDFGQCDAK
Sbjct: 1   MSHNKTRRFKNHHPRRGQSTRGHKFIGEDECLPVDPANEEEPTRPNIHLAMWDFGQCDAK 60

Query: 61  RCTGRKLARFGLLKELNLTSLEFMQDLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA 120
           RCTGRKLARFGLLK           DLRVNSGFGGIVLSPVGVNCVSKEDHSLLK+KGLA
Sbjct: 61  RCTGRKLARFGLLK-----------DLRVNSGFGGIVLSPVGVNCVSKEDHSLLKKKGLA 120

Query: 121 VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET 180
           VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET
Sbjct: 121 VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET 180

Query: 181 ADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADK 240
           ADLLL KFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADK
Sbjct: 181 ADLLLGKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADK 240

Query: 241 SSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE 279
           SSVSEHDE SDDSEDGLPPLEKNLNHLTLQQESDEESE
Sbjct: 241 SSVSEHDEGSDDSEDGLPPLEKNLNHLTLQQESDEESE 267

[Close]

BLAST of Pay0002019 vs. NCBI nr
Match: XP_031745815.1 (ribosome biogenesis protein TSR3 homolog isoform X2 [Cucumis sativus])

HSP 1 Score: 517.3 bits (1331), Expect = 8.1e-143
Identity = 260/278 (93.53%), Postives = 260/278 (93.53%), Query Frame = 0


Query: 1   MSHNKPRRFKNHHPRRGQSTRGHKFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAK 60
           MSHNK RRFKNHHPRRGQSTRGHKFIGEDE LPVDPANEEEPTRPNI LAMWDFGQCDAK
Sbjct: 1   MSHNKTRRFKNHHPRRGQSTRGHKFIGEDECLPVDPANEEEPTRPNIHLAMWDFGQCDAK 60

Query: 61  RCTGRKLARFGLLKELNLTSLEFMQDLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA 120
           RCTGRKLARFGLLK           DLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA
Sbjct: 61  RCTGRKLARFGLLK-----------DLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLA 120

Query: 121 VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET 180
           VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET
Sbjct: 121 VVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGET 180

Query: 181 ADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADK 240
           ADLLL KFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVE  DK
Sbjct: 181 ADLLLGKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVE--DK 240

Query: 241 SSVSEHDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE 279
           SSVSEHDE SDDSEDGLPPLEKNLNHLTLQQESDEESE
Sbjct: 241 SSVSEHDEGSDDSEDGLPPLEKNLNHLTLQQESDEESE 265

[Close]

BLAST of Pay0002019 vs. TAIR 10
Match: AT5G10070.1 (RNase L inhibitor protein-related )

HSP 1 Score: 363.2 bits (931), Expect = 1.8e-100
Identity = 178/271 (65.68%), Postives = 212/271 (78.23%), Query Frame = 0


Query: 10  KNHHPRRGQSTRGH--KFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAKRCTGRKL 69
           K++  + G S+RG       EDE LP+D   E+E   P +QLAMWDFGQCDAKRCTGRKL
Sbjct: 5   KHNRSKGGNSSRGRTDNLAREDESLPLDQEPEDEAPVPKVQLAMWDFGQCDAKRCTGRKL 64

Query: 70  ARFGLLKELNLTSLEFMQDLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLAVVDCSWA 129
           ARF LLKE           LRVN+GFGG+VLSPVG  CVS+ED+ L+K+KGLAVVDCSWA
Sbjct: 65  ARFNLLKE-----------LRVNTGFGGVVLSPVGRQCVSREDYDLIKRKGLAVVDCSWA 124

Query: 130 RLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGETADLLLSK 189
           RL DVPF KLRC APRLLPWLVAANPVNYGRPCELSCVEAL+AALI+CGE ETA+LLL K
Sbjct: 125 RLTDVPFAKLRCTAPRLLPWLVAANPVNYGRPCELSCVEALSAALILCGEKETAELLLGK 184

Query: 190 FKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGADKSSVSEHD 249
           FKWGHAFLS+N+++LK+YS CENSA+IISVQN+WL+QQ Q+PK+P  +E   K      D
Sbjct: 185 FKWGHAFLSLNKDILKEYSKCENSAEIISVQNSWLTQQTQIPKQPPALEEHVKKDGESGD 244

Query: 250 EDSDDSEDGLPPLEKNLNHLTLQQESDEESE 279
           E  +D EDGLPPLE+N+NH+ L+   +E+SE
Sbjct: 245 ESEEDDEDGLPPLERNMNHIKLEDSEEEDSE 264

[Close]

BLAST of Pay0002019 vs. TAIR 10
Match: AT5G10070.2 (RNase L inhibitor protein-related )

HSP 1 Score: 359.4 bits (921), Expect = 2.6e-99
Identity = 178/273 (65.20%), Postives = 212/273 (77.66%), Query Frame = 0


Query: 10  KNHHPRRGQSTRGH--KFIGEDEFLPVDPANEEEPTRPNIQLAMWDFGQCDAKRCTGRKL 69
           K++  + G S+RG       EDE LP+D   E+E   P +QLAMWDFGQCDAKRCTGRKL
Sbjct: 5   KHNRSKGGNSSRGRTDNLAREDESLPLDQEPEDEAPVPKVQLAMWDFGQCDAKRCTGRKL 64

Query: 70  ARFGLLKELNLTSLEFMQDLRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLAVVDCSWA 129
           ARF LLKE           LRVN+GFGG+VLSPVG  CVS+ED+ L+K+KGLAVVDCSWA
Sbjct: 65  ARFNLLKE-----------LRVNTGFGGVVLSPVGRQCVSREDYDLIKRKGLAVVDCSWA 124

Query: 130 RLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGETADLLLSK 189
           RL DVPF KLRC APRLLPWLVAANPVNYGRPCELSCVEAL+AALI+CGE ETA+LLL K
Sbjct: 125 RLTDVPFAKLRCTAPRLLPWLVAANPVNYGRPCELSCVEALSAALILCGEKETAELLLGK 184

Query: 190 FKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEGAD--KSSVSE 249
           FKWGHAFLS+N+++LK+YS CENSA+IISVQN+WL+QQ Q+PK+P  +E     K     
Sbjct: 185 FKWGHAFLSLNKDILKEYSKCENSAEIISVQNSWLTQQTQIPKQPPALEERKDVKKDGES 244

Query: 250 HDEDSDDSEDGLPPLEKNLNHLTLQQESDEESE 279
            DE  +D EDGLPPLE+N+NH+ L+   +E+SE
Sbjct: 245 GDESEEDDEDGLPPLERNMNHIKLEDSEEEDSE 266

The following BLAST results are available for this feature:

BLAST of Pay0002019 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5HZH2	6.9e-52	46.96	18S rRNA aminocarboxypropyltransferase OS=Mus musculus OX=10090 GN=Tsr3 PE=1 SV=...	[more]
Q9UJK0	3.0e-47	45.18	18S rRNA aminocarboxypropyltransferase OS=Homo sapiens OX=9606 GN=TSR3 PE=1 SV=1	[more]
Q12094	3.8e-42	39.85	18S rRNA aminocarboxypropyltransferase OS=Saccharomyces cerevisiae (strain ATCC ...	[more]
Q10409	8.1e-37	36.48	18S rRNA aminocarboxypropyltransferase OS=Schizosaccharomyces pombe (strain 972 ...	[more]
Q8PSK5	1.5e-30	39.89	16S rRNA aminocarboxypropyltransferase OS=Methanosarcina mazei (strain ATCC BAA-...	[more]

BLAST of Pay0002019 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BX27	1.7e-149	96.04	18S rRNA aminocarboxypropyltransferase OS=Cucumis melo OX=3656 GN=LOC103494403 P...	[more]
A0A1S3BXV8	7.7e-147	95.32	18S rRNA aminocarboxypropyltransferase OS=Cucumis melo OX=3656 GN=LOC103494403 P...	[more]
A0A0A0KXU5	1.9e-145	90.44	18S rRNA aminocarboxypropyltransferase OS=Cucumis sativus OX=3659 GN=Csa_4G03103...	[more]
A0A6J1J6L0	5.0e-138	89.93	18S rRNA aminocarboxypropyltransferase OS=Cucurbita maxima OX=3661 GN=LOC1114830...	[more]
A0A6J1ETU0	2.5e-137	89.21	18S rRNA aminocarboxypropyltransferase OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of Pay0002019 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453772.1	3.4e-149	96.04	PREDICTED: ribosome biogenesis protein TSR3 homolog isoform X1 [Cucumis melo]	[more]
XP_008453773.1	1.6e-146	95.32	PREDICTED: ribosome biogenesis protein TSR3 homolog isoform X2 [Cucumis melo]	[more]
XP_011653126.1	1.8e-145	94.24	ribosome biogenesis protein TSR3 homolog isoform X1 [Cucumis sativus] >XP_031745...	[more]
XP_031740208.1	5.1e-145	93.88	LOW QUALITY PROTEIN: ribosome biogenesis protein TSR3 homolog [Cucumis sativus]	[more]
XP_031745815.1	8.1e-143	93.53	ribosome biogenesis protein TSR3 homolog isoform X2 [Cucumis sativus]	[more]

BLAST of Pay0002019 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10070.1	1.8e-100	65.68	RNase L inhibitor protein-related	[more]
AT5G10070.2	2.6e-99	65.20	RNase L inhibitor protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007209	RNase L inhibitor RLI-like, possible metal-binding domain	PFAM	PF04068	RLI	coord: 48..78 e-value: 4.9E-13 score: 48.7
IPR007177	16S/18S rRNA aminocarboxypropyltransferase Tsr3, C-terminal	PFAM	PF04034	Ribo_biogen_C	coord: 96..222 e-value: 2.9E-51 score: 172.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..278
IPR022968	16S/18S rRNA aminocarboxypropyltransferase Tsr3	PANTHER	PTHR20426	RIBOSOME BIOGENESIS PROTEIN TSR3 HOMOLOG	coord: 1..275
IPR022968	16S/18S rRNA aminocarboxypropyltransferase Tsr3	HAMAP	MF_01116	TSR3	coord: 48..223 score: 38.495193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0002019.1	Pay0002019.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000455	enzyme-directed rRNA pseudouridine synthesis
biological_process	GO:0030490	maturation of SSU-rRNA
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0106388	18S rRNA aminocarboxypropyltransferase activity
molecular_function	GO:1904047	S-adenosyl-L-methionine binding
molecular_function	GO:0016740	transferase activity