Pay0002016 (gene) Melon (Payzawat) v1

Overview


Name	Pay0002016
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Phytosulfokine-beta
Location	chr07: 29166378 .. 29166839 (-)
RNA-Seq Expression	Pay0002016
Synteny	Pay0002016

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCATATGGCCTCCAAACTTTTCACCTCCATCTACCCTTTTCTCTTCCTCTTCCTCTTTTTTTCCTCCTCCTCAACCACCCCCGTAGCTGCTCGGCCGGTGCCCGGTTTTTCAAACGCTTTTCTCGATACTTCTCGAGATGGGGTATGAAATTTATCACCCAATTCCTCAGCTTGTTCATTCATTAATAATATATATATGTTTCTTAAAAGAATAGAAGTGTTTTTGTTTTTGAAGGTTGTGGATGATGTTTTGGAGGAGGAGAGTTGTGATGAAATTGGAGAAGATTATTGCTTGATGAGGAAAACTGTTGCAGCTCATGTTGATTATATCTACACAGATAGCCAGAAGCCATGAGATATTATTTAGTTTTCACTTTTGTCCCAATTGTACATTCTCACCAGTTTTTAATAAATAGATTTTGAGGGAAAATTAAAATGAAAAATGGTGACAAAAGACAA

mRNA sequence

CTCTCATATGGCCTCCAAACTTTTCACCTCCATCTACCCTTTTCTCTTCCTCTTCCTCTTTTTTTCCTCCTCCTCAACCACCCCCGTAGCTGCTCGGCCGGTGCCCGGTTTTTCAAACGCTTTTCTCGATACTTCTCGAGATGGGGTTGTGGATGATGTTTTGGAGGAGGAGAGTTGTGATGAAATTGGAGAAGATTATTGCTTGATGAGGAAAACTGTTGCAGCTCATGTTGATTATATCTACACAGATAGCCAGAAGCCATGAGATATTATTTAGTTTTCACTTTTGTCCCAATTGTACATTCTCACCAGTTTTTAATAAATAGATTTTGAGGGAAAATTAAAATGAAAAATGGTGACAAAAGACAA

Coding sequence (CDS)

ATGGCCTCCAAACTTTTCACCTCCATCTACCCTTTTCTCTTCCTCTTCCTCTTTTTTTCCTCCTCCTCAACCACCCCCGTAGCTGCTCGGCCGGTGCCCGGTTTTTCAAACGCTTTTCTCGATACTTCTCGAGATGGGGTTGTGGATGATGTTTTGGAGGAGGAGAGTTGTGATGAAATTGGAGAAGATTATTGCTTGATGAGGAAAACTGTTGCAGCTCATGTTGATTATATCTACACAGATAGCCAGAAGCCATGA

Protein sequence

MASKLFTSIYPFLFLFLFFSSSSTTPVAARPVPGFSNAFLDTSRDGVVDDVLEEESCDEIGEDYCLMRKTVAAHVDYIYTDSQKP

Homology

[Close]

BLAST of Pay0002016 vs. ExPASy Swiss-Prot
Match: Q9M2Y0 (Phytosulfokines 3 OS=Arabidopsis thaliana OX=3702 GN=PSK3 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 2.3e-06
Identity = 32/81 (39.51%), Postives = 45/81 (55.56%), Query Frame = 0


Query: 6  FTSIYPFLFLFLFFSSSSTTPVAARPVPGFSNAF-LDTSRDGVVDDVLEEESCDEIGEDY 65
          FT+I+    L       ST   AAR  P  + A   + S   +  D +EEESC+ IGE+ 
Sbjct: 4  FTTIFIMALLL-----CSTLTYAARLTPTTTTALSRENSVKEIEGDKVEEESCNGIGEEE 63

Query: 66 CLMRKTVAAHVDYIYTDSQKP 86
          CL+R+++  H DYIYT + KP
Sbjct: 64 CLIRRSLVLHTDYIYTQNHKP 79

[Close]

BLAST of Pay0002016 vs. ExPASy Swiss-Prot
Match: Q9FS10 (Phytosulfokines OS=Asparagus officinalis OX=4686 GN=PSK PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 5.1e-06
Identity = 33/85 (38.82%), Postives = 47/85 (55.29%), Query Frame = 0


Query: 1  MASKLFTSIYPFLFLFLFFSSSSTTPVAARPVPGFSNAFLDTSRDGVVDDVLEEESCDEI 60
          M+SK  T     L + L FS S     AARP+    +    T    V+ + + +E+C+ +
Sbjct: 1  MSSKAIT----LLLIALLFSLSLAQ--AARPLQPADS----TKSVHVIPEKVHDEACEGV 60

Query: 61 GEDYCLMRKTVAAHVDYIYTDSQKP 86
          GE+ CLMR+T+ AHVDYIYT    P
Sbjct: 61 GEEECLMRRTLTAHVDYIYTQDHNP 75

[Close]

BLAST of Pay0002016 vs. ExPASy Swiss-Prot
Match: Q9SZG4 (Putative phytosulfokines 4 OS=Arabidopsis thaliana OX=3702 GN=PSK4 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.8e-04
Identity = 22/60 (36.67%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 28 AARPVPGFSNAFLDTSRDGVVDDVLEE-------ESCDEIGEDYCLMRKTVAAHVDYIYT 81
          +ARP P +  +F  +  D +  +++E        ESCD+  ++ CL+R+T+ AH+DYIYT
Sbjct: 22 SARPEPAYFASFTTSPADTLSLEMIESKLHEVAGESCDKEDDEDCLVRRTLTAHLDYIYT 81

[Close]

BLAST of Pay0002016 vs. ExPASy Swiss-Prot
Match: O81003 (Phytosulfokines 2 OS=Arabidopsis thaliana OX=3702 GN=PSK2 PE=2 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 4.7e-04
Identity = 27/71 (38.03%), Postives = 39/71 (54.93%), Query Frame = 0


Query: 23 STTPVAARPVPGFSNAF--------LDTSRDGVVDDV-LEEESCDEIGEDYCLMRKTVAA 82
          ST    ARP P  S +         ++   +G +DD+ + +E+C    ED CLMR+T+ A
Sbjct: 16 STLMCTARPEPAISISITTAADPCNMEKKIEGKLDDMHMVDENCGADDED-CLMRRTLVA 75

Query: 83 HVDYIYTDSQK 85
          H DYIYT  +K
Sbjct: 76 HTDYIYTQKKK 85

[Close]

BLAST of Pay0002016 vs. ExPASy TrEMBL
Match: A0A5A7TSX1 (Phytosulfokine-beta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00410 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.4e-38
Identity = 84/85 (98.82%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MASKLFTSIYPFLFLFLFFSSSSTTPVAARPVPGFSNAFLDTSRDGVVDDVLEEESCDEI 60
          MASKLFTSIYPFLFLFLFFSSSSTTPVAARPVPGFSNAFL TSRDGVVDDVLEEESCDEI
Sbjct: 1  MASKLFTSIYPFLFLFLFFSSSSTTPVAARPVPGFSNAFLGTSRDGVVDDVLEEESCDEI 60

Query: 61 GEDYCLMRKTVAAHVDYIYTDSQKP 86
          GEDYCLMRKTVAAHVDYIYTDSQKP
Sbjct: 61 GEDYCLMRKTVAAHVDYIYTDSQKP 85

[Close]

BLAST of Pay0002016 vs. ExPASy TrEMBL
Match: A0A0A0KY18 (Phytosulfokine-beta OS=Cucumis sativus OX=3659 GN=Csa_4G000620 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.3e-36
Identity = 80/87 (91.95%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 1  MASKLFTSIYPFLFLFLFFSSSSTTPVAARPVPGFSNAFLDTSRDGVV--DDVLEEESCD 60
          MASKLFTSIYPFLFLFLFFSSSSTTP+AARPVPGFSNAFL TSRDGVV  DDVLEEESCD
Sbjct: 1  MASKLFTSIYPFLFLFLFFSSSSTTPIAARPVPGFSNAFLGTSRDGVVVEDDVLEEESCD 60

Query: 61 EIGEDYCLMRKTVAAHVDYIYTDSQKP 86
          EIGE+YCLMRKT+AAHVDYIYTD+QKP
Sbjct: 61 EIGEEYCLMRKTLAAHVDYIYTDTQKP 87

[Close]

BLAST of Pay0002016 vs. ExPASy TrEMBL
Match: A0A6J1E4U5 (Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111430788 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 6.2e-23
Identity = 64/88 (72.73%), Postives = 72/88 (81.82%), Query Frame = 0


Query: 1  MASKLFTSIYPFLFLFLFFSSSSTTPVAAR--PVPGFSNAFLDTSRDGVV--DDVLEEES 60
          MASKL TSI+ FLFLF  F SS+TT + AR  PVPGFSNAF  TSRDG+   DD LEEES
Sbjct: 1  MASKLLTSIFTFLFLFFSFVSSATT-IGARPVPVPGFSNAFPGTSRDGLKAGDDALEEES 60

Query: 61 CDEIGEDYCLMRKTVAAHVDYIYTDSQK 85
          C+EIGE+YCLMRKT+AAH DYIYTDSQ+
Sbjct: 61 CEEIGEEYCLMRKTLAAHADYIYTDSQR 87

[Close]

BLAST of Pay0002016 vs. ExPASy TrEMBL
Match: A0A6J1JBS4 (Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111483027 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.4e-21
Identity = 62/88 (70.45%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 1   MASKLFTSIYPFLFLFLFFSSSSTTPVAAR--PVPGFSNAFLDTSRDGVV--DDVLEEES 60
           MA KL TSI+ FLFLF  F SS TT + AR  PVPGFSNAF  TSRD +   DD LEEES
Sbjct: 37  MAPKLLTSIFTFLFLFFSFVSSVTT-IGARPVPVPGFSNAFPGTSRDELKAGDDALEEES 96

Query: 61  CDEIGEDYCLMRKTVAAHVDYIYTDSQK 85
           C+EIGE+YCLMRKT+AAH DYIYTDSQ+
Sbjct: 97  CEEIGEEYCLMRKTLAAHADYIYTDSQR 123

[Close]

BLAST of Pay0002016 vs. ExPASy TrEMBL
Match: A0A6J1D6J2 (Phytosulfokine-beta OS=Momordica charantia OX=3673 GN=LOC111017778 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 9.9e-21
Identity = 60/88 (68.18%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 1  MASKLFTSIYPFLFL-FLFFSSSSTTPVAARPVPGFSNAFLDTSRDG--VVDDVLEEESC 60
          MASKL T+ + FL L F FF SS    VAARPVP F NAF  T+R G  VVDDVLEEESC
Sbjct: 1  MASKLLTTFFTFLSLFFFFFFSSLAITVAARPVPDFPNAFPATTRHGLKVVDDVLEEESC 60

Query: 61 DEIGEDYCLMRKTVAAHVDYIYTDSQKP 86
            IGE+YCLMRKT+AAH+DYIYTD+Q+P
Sbjct: 61 GGIGEEYCLMRKTLAAHLDYIYTDNQEP 88

[Close]

BLAST of Pay0002016 vs. NCBI nr
Match: KAA0044319.1 (Phytosulfokines 3 precursor family protein [Cucumis melo var. makuwa])

HSP 1 Score: 168.3 bits (425), Expect = 2.8e-38
Identity = 84/85 (98.82%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MASKLFTSIYPFLFLFLFFSSSSTTPVAARPVPGFSNAFLDTSRDGVVDDVLEEESCDEI 60
          MASKLFTSIYPFLFLFLFFSSSSTTPVAARPVPGFSNAFL TSRDGVVDDVLEEESCDEI
Sbjct: 1  MASKLFTSIYPFLFLFLFFSSSSTTPVAARPVPGFSNAFLGTSRDGVVDDVLEEESCDEI 60

Query: 61 GEDYCLMRKTVAAHVDYIYTDSQKP 86
          GEDYCLMRKTVAAHVDYIYTDSQKP
Sbjct: 61 GEDYCLMRKTVAAHVDYIYTDSQKP 85

[Close]

BLAST of Pay0002016 vs. NCBI nr
Match: XP_004150263.1 (phytosulfokines 3 [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 1.7e-35
Identity = 80/87 (91.95%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 1  MASKLFTSIYPFLFLFLFFSSSSTTPVAARPVPGFSNAFLDTSRDGVV--DDVLEEESCD 60
          MASKLFTSIYPFLFLFLFFSSSSTTP+AARPVPGFSNAFL TSRDGVV  DDVLEEESCD
Sbjct: 1  MASKLFTSIYPFLFLFLFFSSSSTTPIAARPVPGFSNAFLGTSRDGVVVEDDVLEEESCD 60

Query: 61 EIGEDYCLMRKTVAAHVDYIYTDSQKP 86
          EIGE+YCLMRKT+AAHVDYIYTD+QKP
Sbjct: 61 EIGEEYCLMRKTLAAHVDYIYTDTQKP 87

[Close]

BLAST of Pay0002016 vs. NCBI nr
Match: XP_022922962.1 (phytosulfokines-like [Cucurbita moschata] >KAG6576906.1 Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 116.3 bits (290), Expect = 1.3e-22
Identity = 64/88 (72.73%), Postives = 72/88 (81.82%), Query Frame = 0


Query: 1  MASKLFTSIYPFLFLFLFFSSSSTTPVAAR--PVPGFSNAFLDTSRDGVV--DDVLEEES 60
          MASKL TSI+ FLFLF  F SS+TT + AR  PVPGFSNAF  TSRDG+   DD LEEES
Sbjct: 1  MASKLLTSIFTFLFLFFSFVSSATT-IGARPVPVPGFSNAFPGTSRDGLKAGDDALEEES 60

Query: 61 CDEIGEDYCLMRKTVAAHVDYIYTDSQK 85
          C+EIGE+YCLMRKT+AAH DYIYTDSQ+
Sbjct: 61 CEEIGEEYCLMRKTLAAHADYIYTDSQR 87

[Close]

BLAST of Pay0002016 vs. NCBI nr
Match: KAG7014931.1 (Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 115.2 bits (287), Expect = 2.8e-22
Identity = 63/87 (72.41%), Postives = 70/87 (80.46%), Query Frame = 0


Query: 1  MASKLFTSIYPFLFLFLFFSSSSTTPVAAR-PVPGFSNAFLDTSRDGVV--DDVLEEESC 60
          MASKL TSI+ FLFLF  F SS+TT  A   PVPGFSNAF  TSRDG+   DD LEEESC
Sbjct: 1  MASKLLTSIFTFLFLFFSFVSSATTIGAQPVPVPGFSNAFPGTSRDGLKAGDDALEEESC 60

Query: 61 DEIGEDYCLMRKTVAAHVDYIYTDSQK 85
          +EIGE+YCLMRKT+AAH DYIYTDSQ+
Sbjct: 61 EEIGEEYCLMRKTLAAHADYIYTDSQR 87

[Close]

BLAST of Pay0002016 vs. NCBI nr
Match: XP_038905348.1 (pre-mRNA-processing protein 40A-like isoform X4 [Benincasa hispida])

HSP 1 Score: 112.1 bits (279), Expect = 2.4e-21
Identity = 55/66 (83.33%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 22   SSTTPVAARPVPGFSNAFLDTSRDG--VVDDVLEEESCDEIGEDYCLMRKTVAAHVDYIY 81
            +S   VAARPVPGFSNAF +TSRDG  VVDDVLEEESCDEIGE+YCLMRKT+AAHVDYIY
Sbjct: 1068 ASRATVAARPVPGFSNAFPETSRDGLKVVDDVLEEESCDEIGEEYCLMRKTLAAHVDYIY 1127

Query: 82   TDSQKP 86
            TD QKP
Sbjct: 1128 TDDQKP 1133

[Close]

BLAST of Pay0002016 vs. TAIR 10
Match: AT3G49780.1 (phytosulfokine 4 precursor )

HSP 1 Score: 52.8 bits (125), Expect = 1.6e-07
Identity = 32/81 (39.51%), Postives = 45/81 (55.56%), Query Frame = 0


Query: 6  FTSIYPFLFLFLFFSSSSTTPVAARPVPGFSNAF-LDTSRDGVVDDVLEEESCDEIGEDY 65
          FT+I+    L       ST   AAR  P  + A   + S   +  D +EEESC+ IGE+ 
Sbjct: 4  FTTIFIMALLL-----CSTLTYAARLTPTTTTALSRENSVKEIEGDKVEEESCNGIGEEE 63

Query: 66 CLMRKTVAAHVDYIYTDSQKP 86
          CL+R+++  H DYIYT + KP
Sbjct: 64 CLIRRSLVLHTDYIYTQNHKP 79

[Close]

BLAST of Pay0002016 vs. TAIR 10
Match: AT4G37720.1 (phytosulfokine 6 precursor )

HSP 1 Score: 45.8 bits (107), Expect = 2.0e-05
Identity = 22/60 (36.67%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 28 AARPVPGFSNAFLDTSRDGVVDDVLEE-------ESCDEIGEDYCLMRKTVAAHVDYIYT 81
          +ARP P +  +F  +  D +  +++E        ESCD+  ++ CL+R+T+ AH+DYIYT
Sbjct: 22 SARPEPAYFASFTTSPADTLSLEMIESKLHEVAGESCDKEDDEDCLVRRTLTAHLDYIYT 81

[Close]

BLAST of Pay0002016 vs. TAIR 10
Match: AT2G22860.1 (phytosulfokine 2 precursor )

HSP 1 Score: 45.1 bits (105), Expect = 3.4e-05
Identity = 27/71 (38.03%), Postives = 39/71 (54.93%), Query Frame = 0


Query: 23 STTPVAARPVPGFSNAF--------LDTSRDGVVDDV-LEEESCDEIGEDYCLMRKTVAA 82
          ST    ARP P  S +         ++   +G +DD+ + +E+C    ED CLMR+T+ A
Sbjct: 16 STLMCTARPEPAISISITTAADPCNMEKKIEGKLDDMHMVDENCGADDED-CLMRRTLVA 75

Query: 83 HVDYIYTDSQK 85
          H DYIYT  +K
Sbjct: 76 HTDYIYTQKKK 85

The following BLAST results are available for this feature:

BLAST of Pay0002016 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2Y0	2.3e-06	39.51	Phytosulfokines 3 OS=Arabidopsis thaliana OX=3702 GN=PSK3 PE=2 SV=2	[more]
Q9FS10	5.1e-06	38.82	Phytosulfokines OS=Asparagus officinalis OX=4686 GN=PSK PE=1 SV=1	[more]
Q9SZG4	2.8e-04	36.67	Putative phytosulfokines 4 OS=Arabidopsis thaliana OX=3702 GN=PSK4 PE=3 SV=1	[more]
O81003	4.7e-04	38.03	Phytosulfokines 2 OS=Arabidopsis thaliana OX=3702 GN=PSK2 PE=2 SV=1	[more]

BLAST of Pay0002016 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TSX1	1.4e-38	98.82	Phytosulfokine-beta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G0...	[more]
A0A0A0KY18	8.3e-36	91.95	Phytosulfokine-beta OS=Cucumis sativus OX=3659 GN=Csa_4G000620 PE=3 SV=1	[more]
A0A6J1E4U5	6.2e-23	72.73	Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111430788 PE=3 SV=1	[more]
A0A6J1JBS4	4.4e-21	70.45	Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111483027 PE=3 SV=1	[more]
A0A6J1D6J2	9.9e-21	68.18	Phytosulfokine-beta OS=Momordica charantia OX=3673 GN=LOC111017778 PE=3 SV=1	[more]

BLAST of Pay0002016 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044319.1	2.8e-38	98.82	Phytosulfokines 3 precursor family protein [Cucumis melo var. makuwa]	[more]
XP_004150263.1	1.7e-35	91.95	phytosulfokines 3 [Cucumis sativus]	[more]
XP_022922962.1	1.3e-22	72.73	phytosulfokines-like [Cucurbita moschata] >KAG6576906.1 Phytosulfokines 3, parti...	[more]
KAG7014931.1	2.8e-22	72.41	Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038905348.1	2.4e-21	83.33	pre-mRNA-processing protein 40A-like isoform X4 [Benincasa hispida]	[more]

BLAST of Pay0002016 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49780.1	1.6e-07	39.51	phytosulfokine 4 precursor	[more]
AT4G37720.1	2.0e-05	36.67	phytosulfokine 6 precursor	[more]
AT2G22860.1	3.4e-05	38.03	phytosulfokine 2 precursor	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009438	Phytosulfokine	PFAM	PF06404	PSK	coord: 51..84 e-value: 1.3E-9 score: 38.9
IPR009438	Phytosulfokine	PANTHER	PTHR33285	PHYTOSULFOKINES 3	coord: 1..85
None	No IPR available	PANTHER	PTHR33285:SF1	PHYTOSULFOKINES 3	coord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0002016.1	Pay0002016.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0008283	cell population proliferation
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane
molecular_function	GO:0008083	growth factor activity