Pay0001983 (gene) Melon (Payzawat) v1

Overview


Name	Pay0001983
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	DNA-directed RNA polymerase subunit
Location	chr06: 35716762 .. 35729827 (+)
RNA-Seq Expression	Pay0001983
Synteny	Pay0001983

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTATACGAATTCCAGTTCACTCCCCAGCGGCAACTGATACCACCAATTATTTACTTTTCTTAAAAGAGAGAGAAACGTGCCGGCCGTTTAAACCCTCCCAATTTATTAGTTAAGATATTCTAAATGAGTGTGATATACATACACCCCCAACCAAACAAATGATGGATGTGCCGACATTTCAAATATCTATCAAAAGCTCCCAAACTATATAAGTGTGTTACTTCTTTCTGAACCCTCGATCGCCATGATTCTATTTTTAGCGTGTATTTTCTGTATCTTACCATTGAAAATCTCACCCGCGCAAAGAGGTTTGCAAAAGTCCTGAAAACATACTAATTTTTCAATTGTTTCATGATCTTACATCCCCTGACCTTAAGCTTTTACAGAGTCAATTTACAAATGAGGAACAACCTCCCCAAATTTGATTGTAATCTCTTACCCACACCCTATACCATCCTACAATGTTCTTTTCATTTTGTCTGGATATCATAGTAATATTTACATTCTTTGATGCAGGTTCCCAGTAGGTGTGCTTGTAATGTCCCTGTTCAATGAACCCTCCCGTTATTGCCTTTTAGACTAGTTATGAAAGAAATCATATTAAATATAAAATAATAGCAGAAGTGGAGGAATTAAATATATTTTATAAGGAAAATAGTTGACGCTCCTAACCTCACCTAAAACCTTGTCAAACTTATAATTGGTTTGATCTGCAGTAGTACTGGCACACTATTCCACTGCTTGTTTTTTTTAATCCTACATTACAAGAATTATTGGATCTATGTAGATTGATTTTTCAACTGAGGTTAAGATAATTCATAATCTTGTATAGACGTCTCGGAGGTAGCAATAGTTTCCTATCAATTTAATGGCTGGACAATGTTCTTTTCTTTTTCCTGTTCTTTAGTTCTTGTTTCATTTACATTGGAAGGCATTGGTTTTAGTGGTCGTTTCAGATAATATATGATCCTACATCAGTCAAATAAACTAAACATTAAATTTGAGTATAACATAACCCACTAATGAAACTCCTAGATTGATTAAATGAGAGAAATATAAAATTTTTCTAGTGATAATTAGAAAACTATTTTTCTGGTGTAATATTGCATAACAGATTTTATGCGTGATTAGAAAAAAAAAGCTCGAAATTGTATTATATGTCAATCTGATGCAAATTAAGAGAGCGAAAACATTCCCTTCCTTCACCTCTAAAATGTTAACTTCACACAACTAATATAGAACTTTTTAGTTTCTAGAATTAATTGGAAATAGGAAATAAGAAATTAGATTCTTTTTGTATGCCAATCTATGTCTGAATTTTTATTCATGATGATTGAATAAGGAAAGAATGGAGATCTGGTATTCCAAAAGTGTTAGAGTATGTACTTAAATAATTATTCCTGGATGTGTTTCTAAAATTGGATAGAAACTAATTAAAAAAGGAACTGTCTAGAATAGATATTTAAAAGTGTGAGAGGAAAATAAAAGATAGAGAAAAAAAAATTTTTGTCGCGAAACTGAGAGACATATTCCTAATCGCAAACGATCCGAACTCGAGGATGATGACCGTTAGTTAATAGATAAATACGGATAACTTGATAATCACGACACCCAACGACTCCTCGACCCTTGGGCGGGACCGCGAAGCCAACCGTCTTGCGAAAAACGGGAGAGTAGATCTGTTTCCCATTGATGCACGGCGTGAATACACATCATAGAGATGATTTCGAGTGTTGAACCAGCCTACAAAATTCGGTATAGTCTTGGCTGCTATCGGAAAGTCAGAACCCCCACAGCAACTATAGGTACAACGTCTCTCGAGAGACATACGGTACCAACCCCCTTAGTTCAATCAGTAGTGAACTTTGCTAGTAAGCCTTTGTCTGATGGTTCTATAAAATCTTGCAGCCCGGATTCTTCAAACTGTTGACTTCTGTACCGTCTCCCATTTTTCGCGGGTGTTCGTGCCTATCTCCCCCTAATGGGCACCATTGAGCTGCCCAAACCAATGTTTTTCTTACGACGTTCTACCGACTTGGATCGGTCTGTGGAAGTTTTCCCGCTGAAAAGACCGTGCTCACTTTATGCGTGTCTGACTCGTGCTCACGACCATGGATTCGTGTTGACCGTAGCAGGCGACGATGTCTTCTTAGTTAGTGTAACGACCGGTGCCTGCCACATTTTTCAGCCTCCCCAGATGAATAATTTATTACCGTATTGATTGTATTTCATTGTTTTGAGCCTTTGGGTATTTCCCGTATTTGATTTTTAGACAATTGCCTTCTAATGAGCTGACGAACTTCTTGGCACGACATGGTTAACCTTGTTTATTTTTCTACCTTGTACTAGCCTTTTGCTATGTTTTGGTTCTTTTCTCTATTCTTTAGGTATTTCTGGATGATGTTAAAGAAATGGACGAGAAACCTTAATTTTTGCCTCTTGTGATTGGATTAAGGAATTAATTTGGATTTTGTATTTTTAGGAAGGGACTGTTTTTTGTTCTTTTTTCTTGTGTTAAGGAATGATGTTATCCGTACTGGTTTAAGTTTAGAGGATATTGCGAGTATATCTGGAGTTTGTCTTCTTGCTCTTATTGCTAGACGAGTAAATGTTTGATTTCTTGTTAATGGAACGTGTTACGGAAAAGTAGTTCGAAGGTTGAAATACTACTTCATGAGATTCTTGAGATTCCTTAAGATGTTGAATATTGGATAATGGGATATTCACTTGCACAGCGTTATTAATGTTTCTCTCATGTTCGCTTCTTTTTGTGCTGCGACTTGGTTCGAGAGATTGGGAGTCTAATGATTTCTAGAATTTACGACCGTCATGGACTGATATTCGTTTGCAGAATTCCTACTACTGGTTATTGGTTGTTCACAGCCGCAAATTTGAAGCCGACTGATCATTGAGTTACTGTTTTATTCTTATTTATTTCAGGAACTGATTTGATGGGATCTGCTCTTAGAAAGTAATATAAAAAATCAAGAGTTGAGCGGATTATAACATATGAATTGAAGACCCCACAGAGATGATTAAAAGTAGCAGTAGCATGAAGATTTGGTTCCCGAAATGGTGAATTAGCTTTGGCAAGAACTCAAAGCGTTTTGCAGACATGATTTAATAAAAATTTGACTGTATGCCAGTTCAGCAATCACTGGCTGTGTTTGATAGTGTCTGAAAAAGCACTGTTACTTTTTAGATATCATGTAAATTTAAATTTACATTCATTTATTAACTTAACCTTTTGGGTCAATCCATGATTTAACATGATATCTAAAAAGTTATTTCCTCTCTAACTAAAATTTTCTTACTTATTTTCAACCAAGCGCATTTTTAACAGAGTTAATTTTTAAAAAAATTTTCATACTTGAATGTTATTATCATTTTGAATTAGGTCCAGGTTTATATTGTCCTGATTTCCCGTCAAATTTTCCAATTACCCTGCCAACTCAAGGCTTTAGGCGGGCAGTATGCAACAACGAGTATTGGCGATGATTTTCAATGAAGATCCACATGCATTTTTCCCCGGATCACTAATTCAAGTTCCACAGCATCTGCTTTAATATACCCTATAGAGTTTTGCTGAGTTTCGTATAATGATGGTGGGTTTCTGCGCATGTCGAGTGCTGATATGTAGTAAATAATTTTAGTGGACCGATATCGTAATGATCCTTATCACATAACTGTAGATCAGCGGAAAAAATTTTGGTGTCACCATGTAATGTAATTCTCAGGTAATCATCTCATTCAAAACTGCACTGTTAAGTATGCGATAATGAAAAGAAGATGATGGTCCCCATTACCCCATGAAGATACGAAACCCGTCCATCTCTAGAGAAGGAAAATTCCCCAAATGATGATCAGGAGGCAGCTGCGCTAATGAGAATCCTTGGGTGAAAGAAAAGCAATTGCAAGTCACCAAACATCGTTGTAATTTGTCCATGATAAAGATTCCAAGTTATTTAAACCTTTAGACTATCCACTCATAAAACTTGGTTATCCTGCGAAAATCACAAACATTAAGTTCTTATCTTGTATTTGGATAGTATGCTTCAAAGTTACTGCTTAATCATAGTAAAGACTTTTCCTGCCTTTTATGAGATTATTCTTGGCATCCTGAAAAGAATAACTGATGATGATACTTGTAATTAGATTTATTAGTTCGATTGTAAATATTGCAGGTCTTGAAATTAGTCCTATTTCCCCCCTTCAATCGCATGAAATATGTCAAAGACGAAAGCCAAGCTGACTGTTTCTCCTCTTAATACTCTTGACTGGATGATTCTGCAAGTCCTTCCAATTCCGCCTCCTACACGTGTTTCATTTAAAGTGTATGCGAATGCTTCAGCCACATTTGGAAAACAAACCAATATTATAGCGATGTTAATTCTAGGCAATTGCGGACAGACCACTGTGCCAATTCTGTTATTCACACATAGTGATTGGATCATGCGCATTCTTCTTTCCAATAGTCTACACTCATATATCTAGAGCATCCTCCTTTGAGATTTGTAATCCCTCCTGTGATGTTCTCAATTGTTGTCCTTGTCGTATTTTATATCTGCTGCCAGGTGGCTTCCCAATGATATTTCCATTTGAGTACCCGATTGTGTCTCCCACAACTGTATTGTTCCTTATCTTCCTTTGCGTTGTGACCTTAGGTATCGTACTTATGTGGTTCTTAAGAAAGGAAGACAGTAAAGAAGAAGAACCATCGCTCTATTTAATCCAGATTCCAATCTTTTTAAAGCCATAACGTTCTTATACCCGTTGTTCTATAATATTGCACTGCTGTACGATCTAACCATCAGTAATATCCGAGTTGAGTTATATGCGTCCCATCGACACATTGAAACAGAGCAGATGATTTGACATTCCCTGATTGGCATATTCCAGACTACAAGCAGCATTTGCCTTCAGGATGACAAGAGAGAAATGGGTTATCTACTCTAGCAACATCAGAGCAATTATATTCAGAGATAGAATTGCGCTAATTAGCCTACGTGTCCTTTATGTTGCATAGTCTTGTGTTTTTTTCTCCAATAAGCATTGATGAGTTATTTAAACCAACAACTTATAGGGGCATGATCTACGAAAATCAGAGTATGTCAACACTTACCCATTCTGAGCCTTTGGTATGTACCCACGGAGGTCCGGTGGGTATTAAGCTCATATTGGCAATGTCTATATTATTGTTTTTGTTGCCAAATAAGCTCTGAGTTCTTTTTCATTACTTGTATAGGTCTGTCTATGCTACCTGTATCTTATCTATAATGTGTAGTCTCAATTTTAGGCCACACAGAGATCTGGGAGGCCCATTAAATCTATTATACTAGTAGCATAAGCATCACTCCATAAAAAACCGCCAAGGAAGGCCGAAACGTAATATAAATTGAGAATAAATTTAGAATGCGAGACCAGCCAAAAATTAATTAGTTACTTAGAGCATTAGAGTACCTCCTCTCCCTCTTACAAACCAAACATAACTGATCTTCGAGAGTCTATATAAATTACGAACCCTTAAATACCAATGACCTCAAACCATTTCTAACACATATGTATTTGAGTATAAAGTGTTTCAATCTGGGTATGCCATGCTATTAGACATATTCATGATGCTCGCACGTTGCAGGGAGATTAGAGTGGTATTTTCTAGTTTGTGAAAGTTCTTTAAAATCCCTCCCACCATATATTTATCTTAATCCAAACTGTGATAATAGAAAGTAAAACCTTAGTGAGGAATTTGATGTTGTTATATGCTATTTTTAACCTATCATATCCAGGAACTGTGATTTTTTGGTCCTTTCTAAGGCTCTTGGTTGCGAGCCTTGTCCGTATAAATTGAAAGGTCCATTAAACATCATGGTTTCATCCAAATCCACCTTTATTTTAAAACCTGCCTCGTTATGTCTTGGATTATCTTGTGTTACCTTATCAGCAAAATTATTGTCAGGTAGTATATTTGCAGATAGTTTGTTCGTTTTGAATAAATTTACTTTAGGGCTTTACTGGGTGTCAGAGGTAGCAACATTGGAAAACTTTTACCTTCTAAATCAAATAAGTGTGAGTAAACTGTGTGAGGATAATATCACCGGACGCTCAGGGCCACTAGGCGTTCTCATTCAACCATGAGCTATAAACTTGCAATGGTCCCTAGTAGTTTAACAATCTTAAACCAAGCGAAACACTTGCACCGATCATTACGAATGTAATTGCCGGCAGCAGTGTCAGGCTTGATTCTTCGTATCATTATATATAAACGAGTCCTTGTACTTGGCGAAATTCATGTGAAATGCGTGTAGTGTTGTGTAATTATCACAAGGCAAGATTTTCTGTACCCAGGCTGAATGCCCTCTGCTTTGGATACTTTATCCCATAGACACACCTCTACAACCATTTTAGCGTTCTATAAATTCGACCTAATTCTTTTGCTGCTGTGATAATAGGTGTACTCGACCCATCAGCTCACCATTCCTTTCTCAAGATGGACCCTTTGGAAATTGATCCCCTGGTGAGGTCTCTGAATACTTTATAATCGTCAGCCCTACGTCTCATCCCCTATAACCATGTGCGACTCTATCACTTTATAATGAGACACAGAAATTTCACAAGATCATGCCACATCATAACTTTATTCTTCCCGATACTCCCCTAAATTGCCAATTGTTTTGTCAATCACCTCATATTAAACATCATCTGTCTGTATCTGTCTTAAAATGGCAGGTCTGAGATAAAATGGAAGTTTATCGGGTCCCATGATTCCTCAAGTTCTGTTGAATAGCTCATCCGTTATTGGGCTGAAGTGTTGGAATCGATGAGTAGGTAAGGAGCGTTCTTGCCCCAAATGCATGATTTACAACACGTGCGAGTTCTAGCAGAGGCCGCTTCTGTAATGGTTATAGTGCTATCGTCGATGATCTTCTACTCTCCTAGGATGCCGTAAAATTACAAAAAGGGACACCTTTATAACGAAGGTGAGAGCAATATGATTGTTATTTCTTGCCCTTTGTCTTCAAAACATTTTTGTTTGTTGTATATAACTTGTAAGATGGGATAATGAAACTGCATTGGTAAATTTGCAGGATGTTTTCATGAATATTTTGATGTGGTGGGAAGACTTTGACGGGAAAATTCCTGCCCCTGCAATTTTAAAGCCACAACCTCTTTGGACGGGAAAGCAAGTTTTTAATCTTATTATACCAAAGCAGATCAATCTCACGAGAACTTCTGCCTGGCATTCTGAATCCGAAACTGGACACGTAACTCCTGGAGATACTTTTGTTAGGATTGAGAAGGGGGAGCTACTTTCTGGAACTCTTTGCAAGAAGGCTCTTGGAACATCAACTGGAAGTCTTATACATGTTATTTGGTATGCATTAGCAATAGTGCTATGCACTGCTTTTCAACCGGACGTGGTCTGTAATCATCATCATTATCATCTCTTAAAAAAGTTTTCGCAATTTTTTTTTGAACTCATATTACATTTTTTAAAAGGAACTGTTTGGACTCTTGCTTGACTAATTGGATACGTTTTTATTACACTAAAATTTTAAAAAAAGAAATAATCTGCTGTTGGGATGCAGCCTTGAGGAGGTATGCCACTTAGAGATGAAGGTTAGTGTTTCGAATGTGATGTTCTTCTGTTTGAGTTGTCAAAATGACGGAACTTAACAGTCTTGTAAAAATGACAGAATTGCCTTTTATGATCATTTTTATAAAACTGGAACTCAAATTGTAATTTCACATGGTTTTTCTTTTAAAATTTATTAAGTCTAAATGACATGGTCTATTTTTTTTTTACATTCAACTATTTAGGAACTGCTTTTCCAACACTTTCCAGGCTGGCTTTTATTAGTCCTCCCATTCCCCTTTCTTCTTTGTGGTTTGTATCATAATACTTTCTCGTTAGACTCTTATTTTGTTTAACCGAGGTGTTTAATGTAGTTTTTATGTTGCCTTCTGTGTTTTGTAATATTCTTTTTTTCTGTCCCGTTTCTAATCATGTAAATGTTTCCAGGGAGGAGGTTGGTCCGGATGCAGCCCGAAAATTTCTGGGTCATACTCAGTGGCTCGTCAATTACTGGCTTTTGCAGAATGCTTTTAGCATTGGGATTGGGGATACAATTGCTGATGCAGCAACCATGGAGAAAATTAATGAAACTATCTCTGCTGCTAAAAATGAAGTGAAAAACCTCATAAAGAAAGCCCAAGAACGGAGTTTAGAGCCTGAACCTGGACGAACAATGATGGATTCATTTGAAAACAAAGTGAATCAAGTCCTGAATAAGGCTCGTGATGATGCTGGTAGTAGTGCACAAAAAAGTTTGTCAGAGAGTAACAATTTGAAAGCTATGGTCACTGCAGGATCCAAGGGCAGTTTTATCAACATCTCCCAGATGACTGCTTGTGTGGGGCAGCAGAATGTTGAAGGGAAGCGAATACCATTTGGTTTCATTGATCGAACATTGCCCCATTTCACTAAAGATGATTATGGGCCTGAAAGTCGTGGCTTTGTTGAGAACTCGTATCTTCGAGGTTTGACTCCACAGGAGTTCTTTTTTCATGCTATGGGTGGTAGGGAAGGTCTTATTGATACTGCAGTCAAGACATCTGAAACAGGGTACATCCAGAGGAGGCTGGTGAAGGCCATGGAGGATATCATGGTTAAATATGATGGGACTGTTAGAAACTCATTGGGTGATGTCATTCAGTTCCTGTATGGTGAAGATGGTATGGACGCTGTTTGGATAGAATCTCAGAAACTCGATTCTTTGAAAATGAAGAAAAAGGAATTTGAGAGGATCTTCAGGTACGAGTTTGAAGATGAAAACTGGAAGCCAAATTACATGTTGCCAGAGCATGTAGAAGATTTGAAAACCATCCGAGAATTCCGGAATGTGTTTGAGGCTGAAGTTCAAAAGCTTGAAGCAGACAGGTATCAATTAGGAACAGAAATTGCAACTACAGGTGAAAACTCTTGGCCAATGCCAGTTAACCTGAAAAGGCTAATTCAGAATGCACAGAAAACTTTCAAGATTGACTTTCGAAGGGCTTCTGACATGCATCCTATGGAAATTGTTGAAGCTATTGATAAACTTCAAGAGAGGCTGAAGGTTGTTCCTGGTGAAGATCCTCTAAGTGTGGAGGCTCAAAAGAATGCCACCCTTTTCTTCAATATATTACTCCGAAGCACTTTTGCTAGCAAAAGGGTTTTGGATGAATACAGGCTTACTCGTGAAGCATTCGAGTGGGTTATTGGAGAAATAGAATCACGCTTCCTTCAGTCACTAGTAGCACCTGGTGAAATGATTGGCTGTGTTGCTGCACAGTCCATTGGAGAGCCGGCAACTCAGATGACTCTTAATACCTTCCATTATGCTGGTGTTAGTGCCAAGAATGTCACTCTTGGTGTTCCCAGATTGAGGGAAATCATTAATGTAGCCAAGAGAATCAAAACACCTTCTCTTTCTGTCTATCTAAAACCCGAAGCTAATAAAACCAAGGAGAGAGCGAAGACTGTTCAATGTGCTCTGGAGTATACTACTCTTAGAAGTGTTACACAAGCGACGGAAGTATGGTATGATCCTGACCCCATGAGCACGATTATTGAAGAGGATATTGATTTTGTAAAATCCTATTATGAGATGCCAGATGAGGAAATTGCTCCTGAGAAAATCTCCCCATGGTTGCTTCGTATAGAGTTGAATCGTGAAATGATGGTGGATAAGAAACTAAGCATGGCCAATATTGCTGAGAAGATCAACCTTGAATTTGATGATGATTTGACTTGCATATTTAATGATGATAATGCTGAGAAGCTGATACTTCGTATACGTATCATGAATGATGAAGCTCCAAAGGGGGAGTTGACTGATGAATCAGCTGAAGACGACGTGTTCTTGAAGAAAATTGAGAGTAATATGCTAACTGAAATGGCTCTTCGAGGAATACCAGACATCAACAAGGTTTTCATTAAATGTGGTAAAGTGAACAAGTTCGATGAGAATGAGGGTTTTAAACCAGAGATGGAGTGGATGTTGGATACAGAAGGTGTCAATCTTTTAGCCGTCATGTGTCATGAAGATGTTGATGCGAGGAGGACCACAAGCAACCATTTGATTGAAGTTATTGAAGTTCTTGGAATTGAAGCAGTTCGGCGTTCTCTTCTGGATGAATTGCGTGTTGTTATATCCTTTGATGGTTCTTATGTTAATTACAGACATCTTGCCATTCTTTGTGACACAATGACTTATCGTGGCCACTTGATGGCTATTACTCGTCATGGTATTAATAGAAATGATACTGGACCAATGATGAGATGCTCATTTGAAGAAACTGTGGATATCTTACTTGATGCTGCAGTATATGCTGAAACTGACCACTTAAGGGGTGTAACTGAAAATATAATGTTGGGTCAGCTGGCCCCCATAGGAACTGGAGGCTGTGCTCTGTATCTCAATGATGAGATGTTGAAGAATGCTATTGAGCTCCAGCTGCCTAGTTACATTGACGGTCTGGATTTTGGCATGACACCTTCCCGTTCCCCAATCTCAGGAACTCCTTATCATGAAGGGATGATGTCTCCTAATTATTTGTTGAGCCCAAATCTCCGCCTATCACCTATCAGCGATGCTCAATTTTCACCCTATGTAGGAGGAATGGCATTCTCTCCTACGTCATCTCCAGGCTATAGCCCATCGTCTCCGGGCTACAGTCCATCATCCCCTGGCTATAGTCCCACATCTCCTGGTTATAGTCCTACTTCTCCGGGATACAGCCCTACCTCTCCGGGATACAGTCCAACATCTCCAACATACAGTCCTAGTTCGCCGGGCTATAGCCCAACTAGTCCTGCATATTCTCCTACAAGTCCATCTTATTCACCCACCTCTCCCAGTTACAGCCCAACCTCTCCAAGTTACAGCCCCACCTCTCCTAGTTACAGCCCCACATCACCTAGTTACAGCCCCACTTCCCCAAGCTACAGCCCCACTTCTCCTGCTTACAGTCCAACTTCACCTGCTTACAGTCCCACTTCCCCTGCATATAGCCCAACTTCACCCTCCTACAGCCCAACTTCCCCCTCCTACAGCCCAACTTCACCCTCCTACAGCCCAACATCTCCCTCCTACAGCCCAACATCTCCGTCTTACAGTCCCACATCACCTTCGTACAGCCCCACCTCTCCAGCATATAGCCCCACCTCCCCTGGCTATAGTCCTACGTCTCCAAGCTATAGCCCCACTTCTCCTAGCTATAGTCCAACCTCACCTAGTTATAATCCTCAATCAGCTAAATACAGCCCATCGCAGGCATACTCACCCAGTAGTCCACGGTTGTCTCCTTCAAGTCCATATAGCCCAACCTCGCCCAATTACAGGTAGTGTGAAGTATTTTTTGGATAGAATATCTTGGGCACCGTGCAAGAGTCTGAATGGGAAACTCCCTTGCAATCATGCTTGTTTTTCTGGTTTGTTTCTAATTGTTTTGAATCTAACAAGTTTAAACATCTTGTCTTACCTTGCAGCCCAACGTCGCCATCATATTCTCCTACTTCTCCAGCATATTCTCCATCCAGCCCGACCTACAGTCCTAGCAGGTAAAATTCTACTTCCCTTTTCTGTAGATCTCTCTGTCACTAACATCTACTCTTTCAAACTAAAGCTATGGATTATGATACACGTTTTTGTCCTTGCATTTCTTAACCCACTATTTTGCCTTTCTTTTCCTCAGTCCATATAATACAGGACCCAGCCCAGACTACAGCCCTAGTTCTCCACAGTACAGGTTAGCTGATATTAACTTATTGTTCAAACCATTTACATGTTCTTTCCTAGTGAAATCTGATTGTTTGTCCTCTTTCTAGTCCAAGTGCAGGGTACTCACCTACTGCTCCTGGGTATTCTCCATCATCTACTAGTCAGTACACTCCACAAACAAGTGACAAGGATGATAGGAGTAGAAAGGATGATAGGAACAATCGATGATGAGAGTTCCAAAGCAAATATCCTTGAAGGAAGAGGGTAAAGTTCTTGAAGCCCTGATTTGACTGATGATGAAAAAAGGAGGCTAACTGGTTCGTTTAGTTTTCCTGAATAATTGATCTTCAGGATGTTTGTGGGTTTCTCATCTTGATGCCTGCCGTCATTTCTGGATATGGACTTGGAAAGGGCGTTGTTTCTTAGTTAGCTATTTTCAAAAAAATTGGCTGGGTAGATATTATTTAGTAAGGTTGAATTATCCTCTAGGAAGACTCCTTTTGAGAGTACTAGAGTGTATACATGAAGTAACTTTATATAGTCAGAAAGAAGTATAATGAAGAATACTAAAGTCGACAAAATCAGAGATTTTGGTTATCATACGAGTAGCTGACGTTTTATATGGATATTGTGATTCGTGTCTCCCCACCCCACCCCCAAAGGGGGAAAAAGAAGTTTCAAAGCATATCCAACATTTATAAGGTAATTACATGGAGTTTTTTGTGTAATATTTGACATGGAAATTAGCATAGGAACTAAATAGGATTTAAGTGAAGTAGCTACCCTTTTGTTCGGGTTGGTGTTGGTGTTTTTGTATATTCTTTCATTTGTCTTGATTGAAACGTGGTTTCTTATTTTGAGATTCGAATGATTTTGCACTTTGCTTCATTGTAAAAGTGAACTGATTGTGCAGGTAATTTGTAAATGTCAGGCCCTCGAATTTCAAACGAGAAGAGGCAAATAAACAACCAGATACACCAAGGCAGCATGTTGCTCGGATTGGACACACTATTACATCACTTAGGCTTTCACAAGCTTGTTCATTTCTGCTTTGAAGGATCTGTCAAAACATATTACAAGCAAAAACTTATTCCCTCACAATTTTAGCCATACATTCCATGTAATTTTGTACCCATGTCAAATAGTAGATCATTATTTGAATTAACCTGTATTTTGTGTGTTGATGTCGGAACTCTTTTAAAATGTCGTTCCCTTCTCTGATTAAATGATAATGTTTCTCAACCATAAACTATAAAGTTATATACTATTTTAGTCTCTTGTTAAAACGTTTTGATCCCTC

mRNA sequence

ATGAGTATACGAATTCCAGTTCACTCCCCAGCGCTGCCCAAACCAATGTTTTTCTTACGACGTTCTACCGACTTGGATCGGTCTGTGGAAGTTTTCCCGCTGAAAAGACCGTGCTCACTTTATGCGTGTCTGACTCGAGGCAGCTGCGCTAATGAGAATCCTTGGGTGAAAGAAAAGCAATTGCAAGTCACCAAACATCGTTCCAAGCTGACTGTTTCTCCTCTTAATACTCTTGACTGGATGATTCTGCAAGTCCTTCCAATTCCGCCTCCTACACGTGTTTCATTTAAAAGAAATGGGTTATCTACTCTAGCCACACAGAGATCTGGGAGGCCCATTAAATCTATTATACTAGTCTCTGAATACTTTATAATCGTCAGATGCCGTAAAATTACAAAAAGGGACACCTTTATAACGAAGGATGTTTTCATGAATATTTTGATGTGGTGGGAAGACTTTGACGGGAAAATTCCTGCCCCTGCAATTTTAAAGCCACAACCTCTTTGGACGGGAAAGCAAGTTTTTAATCTTATTATACCAAAGCAGATCAATCTCACGAGAACTTCTGCCTGGCATTCTGAATCCGAAACTGGACACGTAACTCCTGGAGATACTTTTGTTAGGATTGAGAAGGGGGAGCTACTTTCTGGAACTCTTTGCAAGAAGGCTCTTGGAACATCAACTGGAAGTCTTATACATGTTATTTGGGAGGAGGTTGGTCCGGATGCAGCCCGAAAATTTCTGGGTCATACTCAGTGGCTCGTCAATTACTGGCTTTTGCAGAATGCTTTTAGCATTGGGATTGGGGATACAATTGCTGATGCAGCAACCATGGAGAAAATTAATGAAACTATCTCTGCTGCTAAAAATGAAGTGAAAAACCTCATAAAGAAAGCCCAAGAACGGAGTTTAGAGCCTGAACCTGGACGAACAATGATGGATTCATTTGAAAACAAAGTGAATCAAGTCCTGAATAAGGCTCGTGATGATGCTGGTAGTAGTGCACAAAAAAGTTTGTCAGAGAGTAACAATTTGAAAGCTATGGTCACTGCAGGATCCAAGGGCAGTTTTATCAACATCTCCCAGATGACTGCTTGTGTGGGGCAGCAGAATGTTGAAGGGAAGCGAATACCATTTGGTTTCATTGATCGAACATTGCCCCATTTCACTAAAGATGATTATGGGCCTGAAAGTCGTGGCTTTGTTGAGAACTCGTATCTTCGAGGTTTGACTCCACAGGAGTTCTTTTTTCATGCTATGGGTGGTAGGGAAGGTCTTATTGATACTGCAGTCAAGACATCTGAAACAGGGTACATCCAGAGGAGGCTGGTGAAGGCCATGGAGGATATCATGGTTAAATATGATGGGACTGTTAGAAACTCATTGGGTGATGTCATTCAGTTCCTGTATGGTGAAGATGGTATGGACGCTGTTTGGATAGAATCTCAGAAACTCGATTCTTTGAAAATGAAGAAAAAGGAATTTGAGAGGATCTTCAGGTACGAGTTTGAAGATGAAAACTGGAAGCCAAATTACATGTTGCCAGAGCATGTAGAAGATTTGAAAACCATCCGAGAATTCCGGAATGTGTTTGAGGCTGAAGTTCAAAAGCTTGAAGCAGACAGGTATCAATTAGGAACAGAAATTGCAACTACAGGTGAAAACTCTTGGCCAATGCCAGTTAACCTGAAAAGGCTAATTCAGAATGCACAGAAAACTTTCAAGATTGACTTTCGAAGGGCTTCTGACATGCATCCTATGGAAATTGTTGAAGCTATTGATAAACTTCAAGAGAGGCTGAAGGTTGTTCCTGGTGAAGATCCTCTAAGTGTGGAGGCTCAAAAGAATGCCACCCTTTTCTTCAATATATTACTCCGAAGCACTTTTGCTAGCAAAAGGGTTTTGGATGAATACAGGCTTACTCGTGAAGCATTCGAGTGGGTTATTGGAGAAATAGAATCACGCTTCCTTCAGTCACTAGTAGCACCTGGTGAAATGATTGGCTGTGTTGCTGCACAGTCCATTGGAGAGCCGGCAACTCAGATGACTCTTAATACCTTCCATTATGCTGGTGTTAGTGCCAAGAATGTCACTCTTGGTGTTCCCAGATTGAGGGAAATCATTAATGTAGCCAAGAGAATCAAAACACCTTCTCTTTCTGTCTATCTAAAACCCGAAGCTAATAAAACCAAGGAGAGAGCGAAGACTGTTCAATGTGCTCTGGAGTATACTACTCTTAGAAGTGTTACACAAGCGACGGAAGTATGGTATGATCCTGACCCCATGAGCACGATTATTGAAGAGGATATTGATTTTGTAAAATCCTATTATGAGATGCCAGATGAGGAAATTGCTCCTGAGAAAATCTCCCCATGGTTGCTTCGTATAGAGTTGAATCGTGAAATGATGGTGGATAAGAAACTAAGCATGGCCAATATTGCTGAGAAGATCAACCTTGAATTTGATGATGATTTGACTTGCATATTTAATGATGATAATGCTGAGAAGCTGATACTTCGTATACGTATCATGAATGATGAAGCTCCAAAGGGGGAGTTGACTGATGAATCAGCTGAAGACGACGTGTTCTTGAAGAAAATTGAGAGTAATATGCTAACTGAAATGGCTCTTCGAGGAATACCAGACATCAACAAGGTTTTCATTAAATGTGGTAAAGTGAACAAGTTCGATGAGAATGAGGGTTTTAAACCAGAGATGGAGTGGATGTTGGATACAGAAGGTGTCAATCTTTTAGCCGTCATGTGTCATGAAGATGTTGATGCGAGGAGGACCACAAGCAACCATTTGATTGAAGTTATTGAAGTTCTTGGAATTGAAGCAGTTCGGCGTTCTCTTCTGGATGAATTGCGTGTTGTTATATCCTTTGATGGTTCTTATGTTAATTACAGACATCTTGCCATTCTTTGTGACACAATGACTTATCGTGGCCACTTGATGGCTATTACTCGTCATGGTATTAATAGAAATGATACTGGACCAATGATGAGATGCTCATTTGAAGAAACTGTGGATATCTTACTTGATGCTGCAGTATATGCTGAAACTGACCACTTAAGGGGTGTAACTGAAAATATAATGTTGGGTCAGCTGGCCCCCATAGGAACTGGAGGCTGTGCTCTGTATCTCAATGATGAGATGTTGAAGAATGCTATTGAGCTCCAGCTGCCTAGTTACATTGACGGTCTGGATTTTGGCATGACACCTTCCCGTTCCCCAATCTCAGGAACTCCTTATCATGAAGGGATGATGTCTCCTAATTATTTGTTGAGCCCAAATCTCCGCCTATCACCTATCAGCGATGCTCAATTTTCACCCTATGTAGGAGGAATGGCATTCTCTCCTACGTCATCTCCAGGCTATAGCCCATCGTCTCCGGGCTACAGTCCATCATCCCCTGGCTATAGTCCCACATCTCCTGGTTATAGTCCTACTTCTCCGGGATACAGCCCTACCTCTCCGGGATACAGTCCAACATCTCCAACATACAGTCCTAGTTCGCCGGGCTATAGCCCAACTAGTCCTGCATATTCTCCTACAAGTCCATCTTATTCACCCACCTCTCCCAGTTACAGCCCAACCTCTCCAAGTTACAGCCCCACCTCTCCTAGTTACAGCCCCACATCACCTAGTTACAGCCCCACTTCCCCAAGCTACAGCCCCACTTCTCCTGCTTACAGTCCAACTTCACCTGCTTACAGTCCCACTTCCCCTGCATATAGCCCAACTTCACCCTCCTACAGCCCAACTTCCCCCTCCTACAGCCCAACTTCACCCTCCTACAGCCCAACATCTCCCTCCTACAGCCCAACATCTCCGTCTTACAGTCCCACATCACCTTCGTACAGCCCCACCTCTCCAGCATATAGCCCCACCTCCCCTGGCTATAGTCCTACGTCTCCAAGCTATAGCCCCACTTCTCCTAGCTATAGTCCAACCTCACCTAGTTATAATCCTCAATCAGCTAAATACAGCCCATCGCAGGCATACTCACCCAGTAGTCCACGGTTGTCTCCTTCAAGTCCATATAGCCCAACCTCGCCCAATTACAGCCCAACGTCGCCATCATATTCTCCTACTTCTCCAGCATATTCTCCATCCAGCCCGACCTACAGTCCTAGCAGTCCATATAATACAGGACCCAGCCCAGACTACAGCCCTAGTTCTCCACAGTACAGTCCAAGTGCAGGGTACTCACCTACTGCTCCTGGGTATTCTCCATCATCTACTAGTCAGTACACTCCACAAACAAGTGACAAGGATGATAGGAGTAGAAAGGATGATAGGAACAATCGATGATGAGAGTTCCAAAGCAAATATCCTTGAAGGAAGAGGGTAAAGTTCTTGAAGCCCTGATTTGACTGATGATGAAAAAAGGAGGCTAACTGGTTCGTTTAGTTTTCCTGAATAATTGATCTTCAGGATGTTTGTGGGTTTCTCATCTTGATGCCTGCCGTCATTTCTGGATATGGACTTGGAAAGGGCGTTGTTTCTTAGTTAGCTATTTTCAAAAAAATTGGCTGGGTAGATATTATTTAGTAAGGTTGAATTATCCTCTAGGAAGACTCCTTTTGAGAGTACTAGAGTGTATACATGAAGTAACTTTATATAGTCAGAAAGAAGTATAATGAAGAATACTAAAGTCGACAAAATCAGAGATTTTGGTTATCATACGAGTAGCTGACGTTTTATATGGATATTGTGATTCGTGTCTCCCCACCCCACCCCCAAAGGGGGAAAAAGAAGTTTCAAAGCATATCCAACATTTATAAGGTAATTACATGGAGTTTTTTGTGTAATATTTGACATGGAAATTAGCATAGGAACTAAATAGGATTTAAGTGAAGTAGCTACCCTTTTGTTCGGGTTGGTGTTGGTGTTTTTGTATATTCTTTCATTTGTCTTGATTGAAACGTGGTTTCTTATTTTGAGATTCGAATGATTTTGCACTTTGCTTCATTGTAAAAGTGAACTGATTGTGCAGGTAATTTGTAAATGTCAGGCCCTCGAATTTCAAACGAGAAGAGGCAAATAAACAACCAGATACACCAAGGCAGCATGTTGCTCGGATTGGACACACTATTACATCACTTAGGCTTTCACAAGCTTGTTCATTTCTGCTTTGAAGGATCTGTCAAAACATATTACAAGCAAAAACTTATTCCCTCACAATTTTAGCCATACATTCCATGTAATTTTGTACCCATGTCAAATAGTAGATCATTATTTGAATTAACCTGTATTTTGTGTGTTGATGTCGGAACTCTTTTAAAATGTCGTTCCCTTCTCTGATTAAATGATAATGTTTCTCAACCATAAACTATAAAGTTATATACTATTTTAGTCTCTTGTTAAAACGTTTTGATCCCTC

Coding sequence (CDS)

ATGAGTATACGAATTCCAGTTCACTCCCCAGCGCTGCCCAAACCAATGTTTTTCTTACGACGTTCTACCGACTTGGATCGGTCTGTGGAAGTTTTCCCGCTGAAAAGACCGTGCTCACTTTATGCGTGTCTGACTCGAGGCAGCTGCGCTAATGAGAATCCTTGGGTGAAAGAAAAGCAATTGCAAGTCACCAAACATCGTTCCAAGCTGACTGTTTCTCCTCTTAATACTCTTGACTGGATGATTCTGCAAGTCCTTCCAATTCCGCCTCCTACACGTGTTTCATTTAAAAGAAATGGGTTATCTACTCTAGCCACACAGAGATCTGGGAGGCCCATTAAATCTATTATACTAGTCTCTGAATACTTTATAATCGTCAGATGCCGTAAAATTACAAAAAGGGACACCTTTATAACGAAGGATGTTTTCATGAATATTTTGATGTGGTGGGAAGACTTTGACGGGAAAATTCCTGCCCCTGCAATTTTAAAGCCACAACCTCTTTGGACGGGAAAGCAAGTTTTTAATCTTATTATACCAAAGCAGATCAATCTCACGAGAACTTCTGCCTGGCATTCTGAATCCGAAACTGGACACGTAACTCCTGGAGATACTTTTGTTAGGATTGAGAAGGGGGAGCTACTTTCTGGAACTCTTTGCAAGAAGGCTCTTGGAACATCAACTGGAAGTCTTATACATGTTATTTGGGAGGAGGTTGGTCCGGATGCAGCCCGAAAATTTCTGGGTCATACTCAGTGGCTCGTCAATTACTGGCTTTTGCAGAATGCTTTTAGCATTGGGATTGGGGATACAATTGCTGATGCAGCAACCATGGAGAAAATTAATGAAACTATCTCTGCTGCTAAAAATGAAGTGAAAAACCTCATAAAGAAAGCCCAAGAACGGAGTTTAGAGCCTGAACCTGGACGAACAATGATGGATTCATTTGAAAACAAAGTGAATCAAGTCCTGAATAAGGCTCGTGATGATGCTGGTAGTAGTGCACAAAAAAGTTTGTCAGAGAGTAACAATTTGAAAGCTATGGTCACTGCAGGATCCAAGGGCAGTTTTATCAACATCTCCCAGATGACTGCTTGTGTGGGGCAGCAGAATGTTGAAGGGAAGCGAATACCATTTGGTTTCATTGATCGAACATTGCCCCATTTCACTAAAGATGATTATGGGCCTGAAAGTCGTGGCTTTGTTGAGAACTCGTATCTTCGAGGTTTGACTCCACAGGAGTTCTTTTTTCATGCTATGGGTGGTAGGGAAGGTCTTATTGATACTGCAGTCAAGACATCTGAAACAGGGTACATCCAGAGGAGGCTGGTGAAGGCCATGGAGGATATCATGGTTAAATATGATGGGACTGTTAGAAACTCATTGGGTGATGTCATTCAGTTCCTGTATGGTGAAGATGGTATGGACGCTGTTTGGATAGAATCTCAGAAACTCGATTCTTTGAAAATGAAGAAAAAGGAATTTGAGAGGATCTTCAGGTACGAGTTTGAAGATGAAAACTGGAAGCCAAATTACATGTTGCCAGAGCATGTAGAAGATTTGAAAACCATCCGAGAATTCCGGAATGTGTTTGAGGCTGAAGTTCAAAAGCTTGAAGCAGACAGGTATCAATTAGGAACAGAAATTGCAACTACAGGTGAAAACTCTTGGCCAATGCCAGTTAACCTGAAAAGGCTAATTCAGAATGCACAGAAAACTTTCAAGATTGACTTTCGAAGGGCTTCTGACATGCATCCTATGGAAATTGTTGAAGCTATTGATAAACTTCAAGAGAGGCTGAAGGTTGTTCCTGGTGAAGATCCTCTAAGTGTGGAGGCTCAAAAGAATGCCACCCTTTTCTTCAATATATTACTCCGAAGCACTTTTGCTAGCAAAAGGGTTTTGGATGAATACAGGCTTACTCGTGAAGCATTCGAGTGGGTTATTGGAGAAATAGAATCACGCTTCCTTCAGTCACTAGTAGCACCTGGTGAAATGATTGGCTGTGTTGCTGCACAGTCCATTGGAGAGCCGGCAACTCAGATGACTCTTAATACCTTCCATTATGCTGGTGTTAGTGCCAAGAATGTCACTCTTGGTGTTCCCAGATTGAGGGAAATCATTAATGTAGCCAAGAGAATCAAAACACCTTCTCTTTCTGTCTATCTAAAACCCGAAGCTAATAAAACCAAGGAGAGAGCGAAGACTGTTCAATGTGCTCTGGAGTATACTACTCTTAGAAGTGTTACACAAGCGACGGAAGTATGGTATGATCCTGACCCCATGAGCACGATTATTGAAGAGGATATTGATTTTGTAAAATCCTATTATGAGATGCCAGATGAGGAAATTGCTCCTGAGAAAATCTCCCCATGGTTGCTTCGTATAGAGTTGAATCGTGAAATGATGGTGGATAAGAAACTAAGCATGGCCAATATTGCTGAGAAGATCAACCTTGAATTTGATGATGATTTGACTTGCATATTTAATGATGATAATGCTGAGAAGCTGATACTTCGTATACGTATCATGAATGATGAAGCTCCAAAGGGGGAGTTGACTGATGAATCAGCTGAAGACGACGTGTTCTTGAAGAAAATTGAGAGTAATATGCTAACTGAAATGGCTCTTCGAGGAATACCAGACATCAACAAGGTTTTCATTAAATGTGGTAAAGTGAACAAGTTCGATGAGAATGAGGGTTTTAAACCAGAGATGGAGTGGATGTTGGATACAGAAGGTGTCAATCTTTTAGCCGTCATGTGTCATGAAGATGTTGATGCGAGGAGGACCACAAGCAACCATTTGATTGAAGTTATTGAAGTTCTTGGAATTGAAGCAGTTCGGCGTTCTCTTCTGGATGAATTGCGTGTTGTTATATCCTTTGATGGTTCTTATGTTAATTACAGACATCTTGCCATTCTTTGTGACACAATGACTTATCGTGGCCACTTGATGGCTATTACTCGTCATGGTATTAATAGAAATGATACTGGACCAATGATGAGATGCTCATTTGAAGAAACTGTGGATATCTTACTTGATGCTGCAGTATATGCTGAAACTGACCACTTAAGGGGTGTAACTGAAAATATAATGTTGGGTCAGCTGGCCCCCATAGGAACTGGAGGCTGTGCTCTGTATCTCAATGATGAGATGTTGAAGAATGCTATTGAGCTCCAGCTGCCTAGTTACATTGACGGTCTGGATTTTGGCATGACACCTTCCCGTTCCCCAATCTCAGGAACTCCTTATCATGAAGGGATGATGTCTCCTAATTATTTGTTGAGCCCAAATCTCCGCCTATCACCTATCAGCGATGCTCAATTTTCACCCTATGTAGGAGGAATGGCATTCTCTCCTACGTCATCTCCAGGCTATAGCCCATCGTCTCCGGGCTACAGTCCATCATCCCCTGGCTATAGTCCCACATCTCCTGGTTATAGTCCTACTTCTCCGGGATACAGCCCTACCTCTCCGGGATACAGTCCAACATCTCCAACATACAGTCCTAGTTCGCCGGGCTATAGCCCAACTAGTCCTGCATATTCTCCTACAAGTCCATCTTATTCACCCACCTCTCCCAGTTACAGCCCAACCTCTCCAAGTTACAGCCCCACCTCTCCTAGTTACAGCCCCACATCACCTAGTTACAGCCCCACTTCCCCAAGCTACAGCCCCACTTCTCCTGCTTACAGTCCAACTTCACCTGCTTACAGTCCCACTTCCCCTGCATATAGCCCAACTTCACCCTCCTACAGCCCAACTTCCCCCTCCTACAGCCCAACTTCACCCTCCTACAGCCCAACATCTCCCTCCTACAGCCCAACATCTCCGTCTTACAGTCCCACATCACCTTCGTACAGCCCCACCTCTCCAGCATATAGCCCCACCTCCCCTGGCTATAGTCCTACGTCTCCAAGCTATAGCCCCACTTCTCCTAGCTATAGTCCAACCTCACCTAGTTATAATCCTCAATCAGCTAAATACAGCCCATCGCAGGCATACTCACCCAGTAGTCCACGGTTGTCTCCTTCAAGTCCATATAGCCCAACCTCGCCCAATTACAGCCCAACGTCGCCATCATATTCTCCTACTTCTCCAGCATATTCTCCATCCAGCCCGACCTACAGTCCTAGCAGTCCATATAATACAGGACCCAGCCCAGACTACAGCCCTAGTTCTCCACAGTACAGTCCAAGTGCAGGGTACTCACCTACTGCTCCTGGGTATTCTCCATCATCTACTAGTCAGTACACTCCACAAACAAGTGACAAGGATGATAGGAGTAGAAAGGATGATAGGAACAATCGATGA

Protein sequence

MSIRIPVHSPALPKPMFFLRRSTDLDRSVEVFPLKRPCSLYACLTRGSCANENPWVKEKQLQVTKHRSKLTVSPLNTLDWMILQVLPIPPPTRVSFKRNGLSTLATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR

Homology

[Close]

BLAST of Pay0001983 vs. ExPASy Swiss-Prot
Match: P18616 (DNA-directed RNA polymerase II subunit RPB1 OS=Arabidopsis thaliana OX=3702 GN=NRPB1 PE=1 SV=3)

HSP 1 Score: 2215.3 bits (5739), Expect = 0.0e+00
Identity = 1148/1331 (86.25%), Postives = 1230/1331 (92.41%), Query Frame = 0


Query: 104  LATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 163
            + + ++ RP+  I+  +    ++ CRKITKRDTFI KDVFMN LMWWEDFDGK+PAPAIL
Sbjct: 525  IVSPQANRPVMGIVQDT----LLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAIL 584

Query: 164  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA 223
            KP+PLWTGKQVFNLIIPKQINL R SAWH+++ETG +TPGDT VRIE+GELL+GTLCKK 
Sbjct: 585  KPRPLWTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKT 644

Query: 224  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 283
            LGTS GSL+HVIWEEVGPDAARKFLGHTQWLVNYWLLQN F+IGIGDTIAD++TMEKINE
Sbjct: 645  LGTSNGSLVHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFTIGIGDTIADSSTMEKINE 704

Query: 284  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 343
            TIS AK  VK+LI++ Q + L+PEPGRTM D+FEN+VNQVLNKARDDAGSSAQKSL+E+N
Sbjct: 705  TISNAKTAVKDLIRQFQGKELDPEPGRTMRDTFENRVNQVLNKARDDAGSSAQKSLAETN 764

Query: 344  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 403
            NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF  RTLPHFTKDDYGPESRGFVE
Sbjct: 765  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFDGRTLPHFTKDDYGPESRGFVE 824

Query: 404  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 463
            NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG
Sbjct: 825  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 884

Query: 464  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 523
            DVIQFLYGEDGMDAVWIESQKLDSLKMKK EF+R F+YE +DENW P Y+  EH+EDLK 
Sbjct: 885  DVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDRTFKYEIDDENWNPTYLSDEHLEDLKG 944

Query: 524  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 583
            IRE R+VF+AE  KLE DR+QLGTEIAT G+++WP+PVN+KR I NAQKTFKID R+ SD
Sbjct: 945  IRELRDVFDAEYSKLETDRFQLGTEIATNGDSTWPLPVNIKRHIWNAQKTFKIDLRKISD 1004

Query: 584  MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 643
            MHP+EIV+A+DKLQERL VVPG+D LSVEAQKNATLFFNILLRST ASKRVL+EY+L+RE
Sbjct: 1005 MHPVEIVDAVDKLQERLLVVPGDDALSVEAQKNATLFFNILLRSTLASKRVLEEYKLSRE 1064

Query: 644  AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 703
            AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR
Sbjct: 1065 AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 1124

Query: 704  LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 763
            LREIINVAKRIKTPSLSVYL PEA+K+KE AKTVQCALEYTTLRSVTQATEVWYDPDPMS
Sbjct: 1125 LREIINVAKRIKTPSLSVYLTPEASKSKEGAKTVQCALEYTTLRSVTQATEVWYDPDPMS 1184

Query: 764  TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 823
            TIIEED +FV+SYYEMPDE+++P+KISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDD
Sbjct: 1185 TIIEEDFEFVRSYYEMPDEDVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDD 1244

Query: 824  DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 883
            DLTCIFNDDNA+KLILRIRIMNDE PKGEL DESAEDDVFLKKIESNMLTEMALRGIPDI
Sbjct: 1245 DLTCIFNDDNAQKLILRIRIMNDEGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDI 1304

Query: 884  NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL 943
            NKVFIK  + ++FDE  GFK   EWMLDTEGVNLLAVMCHEDVD +RTTSNHLIE+IEVL
Sbjct: 1305 NKVFIKQVRKSRFDEEGGFKTSEEWMLDTEGVNLLAVMCHEDVDPKRTTSNHLIEIIEVL 1364

Query: 944  GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1003
            GIEAVRR+LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MR
Sbjct: 1365 GIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMR 1424

Query: 1004 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1063
            CSFEETVDILLDAA YAETD LRGVTENIMLGQLAPIGTG C LYLNDEMLKNAIELQLP
Sbjct: 1425 CSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYLNDEMLKNAIELQLP 1484

Query: 1064 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1123
            SY+DGL+FGMTP+RSP+SGTPYHEGMMSPNYLLSPN+RLSP+SDAQFSPYVGGMAFSP+ 
Sbjct: 1485 SYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS- 1544

Query: 1124 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1183
                  SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY
Sbjct: 1545 ------SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1604

Query: 1184 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1243
            SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS
Sbjct: 1605 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1664

Query: 1244 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1303
            PA       YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS
Sbjct: 1665 PA-------YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1724

Query: 1304 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1363
            PTSPSYSPTSPSY PTSPSYNPQSAKYSPS AYSPS+ RLSP+SPYSPTSPNYSPTSPSY
Sbjct: 1725 PTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSY 1784

Query: 1364 SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT 1423
            SPTSP+YSPSSPTYSPSSPY++G SPD       YSPSAGYSPT PGYSPSST QYTP  
Sbjct: 1785 SPTSPSYSPSSPTYSPSSPYSSGASPD-------YSPSAGYSPTLPGYSPSSTGQYTPHE 1830

Query: 1424 SDKDDRSRKDD 1435
             DK D++ K D
Sbjct: 1845 GDKKDKTGKKD 1830

[Close]

BLAST of Pay0001983 vs. ExPASy Swiss-Prot
Match: P11414 (DNA-directed RNA polymerase II subunit RPB1 OS=Cricetulus griseus OX=10029 GN=POLR2A PE=1 SV=2)

HSP 1 Score: 1456.4 bits (3769), Expect = 0.0e+00
Identity = 820/1397 (58.70%), Postives = 1022/1397 (73.16%), Query Frame = 0


Query: 104  LATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 163
            + T +S RP+  I+  +    +   RK TKRD F+ +   MN+LM+   +DGK+P PAIL
Sbjct: 525  IVTPQSNRPVMGIVQDT----LTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAIL 584

Query: 164  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETG----HVTPGDTFVRIEKGELLSGTL 223
            KP+PLWTGKQ+F+LIIP  IN  RT + H + E      H++PGDT V +E GEL+ G L
Sbjct: 585  KPRPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGIL 644

Query: 224  CKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATME 283
            CKK+LGTS GSL+H+ + E+G D  R F  + Q ++N WLL    +IGIGD+IAD+ T +
Sbjct: 645  CKKSLGTSAGSLVHISYLEMGHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQ 704

Query: 284  KINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSL 343
             I  TI  AK +V  +I+KA    LEP PG T+  +FEN+VN++LN ARD  GSSAQKSL
Sbjct: 705  DIQNTIKKAKQDVIEVIEKAHNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSL 764

Query: 344  SESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESR 403
            SE NN K+MV +G+KGS INISQ+ A VGQQNVEGKRIPFGF  RTLPHF KDDYGPESR
Sbjct: 765  SEYNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESR 824

Query: 404  GFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 463
            GFVENSYL GLTP EFFFHAMGGREGLIDTAVKT+ETGYIQRRL+K+ME +MVKYD TVR
Sbjct: 825  GFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVR 884

Query: 464  NSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVE 523
            NS+  V+Q  YGEDG+    +E Q L +LK   K FE+ FR+++ +E      +  + V+
Sbjct: 885  NSINQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVK 944

Query: 524  DLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFR 583
            D+ +    +N  E E +++  DR  L   I  TG++   +P NL R+I NAQK F I+ R
Sbjct: 945  DVLSNAHIQNELEREFERMREDREVLRV-IFPTGDSKVVLPCNLLRMIWNAQKIFHINPR 1004

Query: 584  RASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYR 643
              SD+HP+++VE + +L ++L +V G+DPLS +AQ+NATL FNI LRST  S+R+ +E+R
Sbjct: 1005 LPSDLHPIKVVEGVKELSKKLVIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFR 1064

Query: 644  LTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTL 703
            L+ EAF+W++GEIES+F Q++  PGEM+G +AAQS+GEPATQMTLNTFHYAGVSAKNVTL
Sbjct: 1065 LSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTL 1124

Query: 704  GVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDP 763
            GVPRL+E+IN++K+ KTPSL+V+L  ++ +  ERAK + C LE+TTLR VT  T ++YDP
Sbjct: 1125 GVPRLKELINISKKPKTPSLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDP 1184

Query: 764  DPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINL 823
            +P ST++ ED ++V  YYEMPD ++A  +ISPWLLR+EL+R+ M D+KL+M  IAEKIN 
Sbjct: 1185 NPQSTVVAEDQEWVNVYYEMPDFDVA--RISPWLLRVELDRKHMTDRKLTMEQIAEKINA 1244

Query: 824  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDE---SAEDDVFLKKIESNMLTEMA 883
             F DDL CIFNDDNAEKL+LRIRIMN +  K +  +E     +DDVFL+ IESNMLT+M 
Sbjct: 1245 GFGDDLNCIFNDDNAEKLVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMT 1304

Query: 884  LRGIPDINKVFIKCGKVNK-----FDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRT 943
            L+GI  I+KV++   + +        E+  FK   EW+L+T+GV+L+ V+  +DVD  RT
Sbjct: 1305 LQGIEQISKVYMHLPQTDNKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRT 1364

Query: 944  TSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRH 1003
            TSN ++E+  VLGIEAVR++L  EL  VISFDGSYVNYRHLA+LCDTMT RGHLMAITRH
Sbjct: 1365 TSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRH 1424

Query: 1004 GINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLND 1063
            G+NR DTGP+M+CSFEETVD+L++AA + E+D ++GV+ENIMLGQLAP GTG   L L+ 
Sbjct: 1425 GVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDA 1484

Query: 1064 EMLKNAIELQLPSYIDGLD--------FGMTPSRSPISG-----TPYHEGMMSPNYLLSP 1123
            E  K  +E  +P+ I GL         FG  P  SP+ G     TP+++G        SP
Sbjct: 1485 EKCKYGME--IPTNIPGLGAAGPTGMFFGSAP--SPMGGISPAMTPWNQGATPAYGAWSP 1544

Query: 1124 NLRL---------------------------------SPISDAQFSPYV--GGMAFSPTS 1183
            ++                                   SP S    SPY+   G A SP+ 
Sbjct: 1545 SVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSY 1604

Query: 1184 SP-----------GYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPS 1243
            SP           GY+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+
Sbjct: 1605 SPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPT 1664

Query: 1244 SPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAY 1303
            SP YSPTSP+YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP+Y
Sbjct: 1665 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1724

Query: 1304 SPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1363
            SPTSP+YSPTSP+YSPTSPSYSPTSPSYSPTSP+YSPTSP+Y+PTSPSYSPTSPSYSPTS
Sbjct: 1725 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTS 1784

Query: 1364 PAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSP-SQAYSPSSPRLSPSSP-YS 1423
            P Y+PTSP YSPTSPSYSPTSPSYSPTSPSY+P S +Y+P S  Y+PSSP  SPSSP YS
Sbjct: 1785 PNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYS 1844

Query: 1424 PTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSA-GYSPTAP 1427
            PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP  +  SP YSP+SP YSP+   YSPT+P
Sbjct: 1845 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSP 1904

[Close]

BLAST of Pay0001983 vs. ExPASy Swiss-Prot
Match: P08775 (DNA-directed RNA polymerase II subunit RPB1 OS=Mus musculus OX=10090 GN=Polr2a PE=1 SV=3)

HSP 1 Score: 1456.4 bits (3769), Expect = 0.0e+00
Identity = 820/1397 (58.70%), Postives = 1022/1397 (73.16%), Query Frame = 0


Query: 104  LATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 163
            + T +S RP+  I+  +    +   RK TKRD F+ +   MN+LM+   +DGK+P PAIL
Sbjct: 525  IVTPQSNRPVMGIVQDT----LTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAIL 584

Query: 164  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETG----HVTPGDTFVRIEKGELLSGTL 223
            KP+PLWTGKQ+F+LIIP  IN  RT + H + E      H++PGDT V +E GEL+ G L
Sbjct: 585  KPRPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGIL 644

Query: 224  CKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATME 283
            CKK+LGTS GSL+H+ + E+G D  R F  + Q ++N WLL    +IGIGD+IAD+ T +
Sbjct: 645  CKKSLGTSAGSLVHISYLEMGHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQ 704

Query: 284  KINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSL 343
             I  TI  AK +V  +I+KA    LEP PG T+  +FEN+VN++LN ARD  GSSAQKSL
Sbjct: 705  DIQNTIKKAKQDVIEVIEKAHNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSL 764

Query: 344  SESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESR 403
            SE NN K+MV +G+KGS INISQ+ A VGQQNVEGKRIPFGF  RTLPHF KDDYGPESR
Sbjct: 765  SEYNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESR 824

Query: 404  GFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 463
            GFVENSYL GLTP EFFFHAMGGREGLIDTAVKT+ETGYIQRRL+K+ME +MVKYD TVR
Sbjct: 825  GFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVR 884

Query: 464  NSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVE 523
            NS+  V+Q  YGEDG+    +E Q L +LK   K FE+ FR+++ +E      +  + V+
Sbjct: 885  NSINQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVK 944

Query: 524  DLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFR 583
            D+ +    +N  E E +++  DR  L   I  TG++   +P NL R+I NAQK F I+ R
Sbjct: 945  DVLSNAHIQNELEREFERMREDREVLRV-IFPTGDSKVVLPCNLLRMIWNAQKIFHINPR 1004

Query: 584  RASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYR 643
              SD+HP+++VE + +L ++L +V G+DPLS +AQ+NATL FNI LRST  S+R+ +E+R
Sbjct: 1005 LPSDLHPIKVVEGVKELSKKLVIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFR 1064

Query: 644  LTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTL 703
            L+ EAF+W++GEIES+F Q++  PGEM+G +AAQS+GEPATQMTLNTFHYAGVSAKNVTL
Sbjct: 1065 LSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTL 1124

Query: 704  GVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDP 763
            GVPRL+E+IN++K+ KTPSL+V+L  ++ +  ERAK + C LE+TTLR VT  T ++YDP
Sbjct: 1125 GVPRLKELINISKKPKTPSLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDP 1184

Query: 764  DPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINL 823
            +P ST++ ED ++V  YYEMPD ++A  +ISPWLLR+EL+R+ M D+KL+M  IAEKIN 
Sbjct: 1185 NPQSTVVAEDQEWVNVYYEMPDFDVA--RISPWLLRVELDRKHMTDRKLTMEQIAEKINA 1244

Query: 824  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDE---SAEDDVFLKKIESNMLTEMA 883
             F DDL CIFNDDNAEKL+LRIRIMN +  K +  +E     +DDVFL+ IESNMLT+M 
Sbjct: 1245 GFGDDLNCIFNDDNAEKLVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMT 1304

Query: 884  LRGIPDINKVFIKCGKVNK-----FDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRT 943
            L+GI  I+KV++   + +        E+  FK   EW+L+T+GV+L+ V+  +DVD  RT
Sbjct: 1305 LQGIEQISKVYMHLPQTDNKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRT 1364

Query: 944  TSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRH 1003
            TSN ++E+  VLGIEAVR++L  EL  VISFDGSYVNYRHLA+LCDTMT RGHLMAITRH
Sbjct: 1365 TSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRH 1424

Query: 1004 GINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLND 1063
            G+NR DTGP+M+CSFEETVD+L++AA + E+D ++GV+ENIMLGQLAP GTG   L L+ 
Sbjct: 1425 GVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDA 1484

Query: 1064 EMLKNAIELQLPSYIDGLD--------FGMTPSRSPISG-----TPYHEGMMSPNYLLSP 1123
            E  K  +E  +P+ I GL         FG  P  SP+ G     TP+++G        SP
Sbjct: 1485 EKCKYGME--IPTNIPGLGAAGPTGMFFGSAP--SPMGGISPAMTPWNQGATPAYGAWSP 1544

Query: 1124 NLRL---------------------------------SPISDAQFSPYV--GGMAFSPTS 1183
            ++                                   SP S    SPY+   G A SP+ 
Sbjct: 1545 SVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSY 1604

Query: 1184 SP-----------GYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPS 1243
            SP           GY+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+
Sbjct: 1605 SPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPT 1664

Query: 1244 SPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAY 1303
            SP YSPTSP+YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP+Y
Sbjct: 1665 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1724

Query: 1304 SPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1363
            SPTSP+YSPTSP+YSPTSPSYSPTSPSYSPTSP+YSPTSP+Y+PTSPSYSPTSPSYSPTS
Sbjct: 1725 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTS 1784

Query: 1364 PAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSP-SQAYSPSSPRLSPSSP-YS 1423
            P Y+PTSP YSPTSPSYSPTSPSYSPTSPSY+P S +Y+P S  Y+PSSP  SPSSP YS
Sbjct: 1785 PNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYS 1844

Query: 1424 PTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSA-GYSPTAP 1427
            PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP  +  SP YSP+SP YSP+   YSPT+P
Sbjct: 1845 PTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSP 1904

[Close]

BLAST of Pay0001983 vs. ExPASy Swiss-Prot
Match: P24928 (DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens OX=9606 GN=POLR2A PE=1 SV=2)

HSP 1 Score: 1454.5 bits (3764), Expect = 0.0e+00
Identity = 819/1397 (58.63%), Postives = 1021/1397 (73.09%), Query Frame = 0


Query: 104  LATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 163
            + T +S RP+  I+  +    +   RK TKRD F+ +   MN+LM+   +DGK+P PAIL
Sbjct: 525  IVTPQSNRPVMGIVQDT----LTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAIL 584

Query: 164  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETG----HVTPGDTFVRIEKGELLSGTL 223
            KP+PLWTGKQ+F+LIIP  IN  RT + H + E      H++PGDT V +E GEL+ G L
Sbjct: 585  KPRPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGIL 644

Query: 224  CKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATME 283
            CKK+LGTS GSL+H+ + E+G D  R F  + Q ++N WLL    +IGIGD+IAD+ T +
Sbjct: 645  CKKSLGTSAGSLVHISYLEMGHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQ 704

Query: 284  KINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSL 343
             I  TI  AK +V  +I+KA    LEP PG T+  +FEN+VN++LN ARD  GSSAQKSL
Sbjct: 705  DIQNTIKKAKQDVIEVIEKAHNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSL 764

Query: 344  SESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESR 403
            SE NN K+MV +G+KGS INISQ+ A VGQQNVEGKRIPFGF  RTLPHF KDDYGPESR
Sbjct: 765  SEYNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESR 824

Query: 404  GFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 463
            GFVENSYL GLTP EFFFHAMGGREGLIDTAVKT+ETGYIQRRL+K+ME +MVKYD TVR
Sbjct: 825  GFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVR 884

Query: 464  NSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVE 523
            NS+  V+Q  YGEDG+    +E Q L +LK   K FE+ FR+++ +E      +  + V+
Sbjct: 885  NSINQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVK 944

Query: 524  DLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFR 583
            D+ +    +N  E E +++  DR  L   I  TG++   +P NL R+I NAQK F I+ R
Sbjct: 945  DVLSNAHIQNELEREFERMREDREVLRV-IFPTGDSKVVLPCNLLRMIWNAQKIFHINPR 1004

Query: 584  RASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYR 643
              SD+HP+++VE + +L ++L +V G+DPLS +AQ+NATL FNI LRST  S+R+ +E+R
Sbjct: 1005 LPSDLHPIKVVEGVKELSKKLVIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFR 1064

Query: 644  LTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTL 703
            L+ EAF+W++GEIES+F Q++  PGEM+G +AAQS+GEPATQMTLNTFHYAGVSAKNVTL
Sbjct: 1065 LSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTL 1124

Query: 704  GVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDP 763
            GVPRL+E+IN++K+ KTPSL+V+L  ++ +  ERAK + C LE+TTLR VT  T ++YDP
Sbjct: 1125 GVPRLKELINISKKPKTPSLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDP 1184

Query: 764  DPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINL 823
            +P ST++ ED ++V  YYEMPD ++A  +ISPWLLR+EL+R+ M D+KL+M  IAEKIN 
Sbjct: 1185 NPQSTVVAEDQEWVNVYYEMPDFDVA--RISPWLLRVELDRKHMTDRKLTMEQIAEKINA 1244

Query: 824  EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDE---SAEDDVFLKKIESNMLTEMA 883
             F DDL CIFNDDNAEKL+LRIRIMN +  K +  +E     +DDVFL+ IESNMLT+M 
Sbjct: 1245 GFGDDLNCIFNDDNAEKLVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMT 1304

Query: 884  LRGIPDINKVFIKCGKVNK-----FDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRT 943
            L+GI  I+KV++   + +        E+  FK   EW+L+T+GV+L+ V+  +DVD  RT
Sbjct: 1305 LQGIEQISKVYMHLPQTDNKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRT 1364

Query: 944  TSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRH 1003
            TSN ++E+  VLGIEAVR++L  EL  VISFDGSYVNYRHLA+LCDTMT RGHLMAITRH
Sbjct: 1365 TSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRH 1424

Query: 1004 GINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLND 1063
            G+NR DTGP+M+CSFEETVD+L++AA + E+D ++GV+ENIMLGQLAP GTG   L L+ 
Sbjct: 1425 GVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDA 1484

Query: 1064 EMLKNAIELQLPSYIDGLD--------FGMTPSRSPISG-----TPYHEGMMSPNYLLSP 1123
            E  K  +E  +P+ I GL         FG  P  SP+ G     TP+++G        SP
Sbjct: 1485 EKCKYGME--IPTNIPGLGAAGPTGMFFGSAP--SPMGGISPAMTPWNQGATPAYGAWSP 1544

Query: 1124 NLRL---------------------------------SPISDAQFSPYV--GGMAFSPTS 1183
            ++                                   SP S    SPY+   G A SP+ 
Sbjct: 1545 SVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSY 1604

Query: 1184 SP-----------GYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPS 1243
            SP           GY+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+
Sbjct: 1605 SPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPT 1664

Query: 1244 SPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAY 1303
            SP YSPTSP+YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP+Y
Sbjct: 1665 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1724

Query: 1304 SPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1363
            SPTSP+YSPTSP+YSPTSPSYSPTSPSYSPTSP+YSPTSP+Y+PTSPSYSPTSPSYSPTS
Sbjct: 1725 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTS 1784

Query: 1364 PAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSP-SQAYSPSSPRLSPSSP-YS 1423
            P Y+PTSP YSPTSPSYSPTSPSYSPTSPSY+P S +Y+P S  Y+PSSP  SPSSP YS
Sbjct: 1785 PNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYS 1844

Query: 1424 PTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSA-GYSPTAP 1427
            P SP Y+PTSPSYSP+SP Y+P+SP YSP+SP  +  SP YSP+SP YSP+   YSPT+P
Sbjct: 1845 PASPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSP 1904

[Close]

BLAST of Pay0001983 vs. ExPASy Swiss-Prot
Match: P35084 (DNA-directed RNA polymerase II subunit rpb1 OS=Dictyostelium discoideum OX=44689 GN=polr2a PE=2 SV=2)

HSP 1 Score: 1433.3 bits (3709), Expect = 0.0e+00
Identity = 777/1234 (62.97%), Postives = 952/1234 (77.15%), Query Frame = 0


Query: 104  LATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 163
            + + +S RP+  I+  +    ++  R  TKRD F+ KD+ MNILMW   +DGK+P PAIL
Sbjct: 516  IVSPQSNRPVMGIVQDT----LLGSRLFTKRDCFMEKDLVMNILMWLPSWDGKVPPPAIL 575

Query: 164  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA 223
            KP+ LWTGKQ+F+LIIP  INL R ++ H++ E    + GDT V IE+GELL+G LCK++
Sbjct: 576  KPKQLWTGKQLFSLIIP-DINLIRFTSTHNDKEPNECSAGDTRVIIERGELLAGILCKRS 635

Query: 224  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 283
            LG + GS+IHV+  E G D  R F+  TQ +VN+WL+   F++GIGDTIAD+ATM K+  
Sbjct: 636  LGAANGSIIHVVMNEHGHDTCRLFIDQTQTVVNHWLINRGFTMGIGDTIADSATMAKVTL 695

Query: 284  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 343
            TIS+AKN+VK LI KAQ +  E +PG++++++FE KVNQVLNKARD AGSSAQ SLSE N
Sbjct: 696  TISSAKNQVKELIIKAQNKQFECQPGKSVIETFEQKVNQVLNKARDTAGSSAQDSLSEDN 755

Query: 344  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 403
            NLKAMVTAGSKGSFINISQM ACVGQQNVEGKRIPFGF  RTLPHFTKDDYGPESRGFVE
Sbjct: 756  NLKAMVTAGSKGSFINISQMMACVGQQNVEGKRIPFGFQSRTLPHFTKDDYGPESRGFVE 815

Query: 404  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 463
            NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED+ +KYD TVRNSLG
Sbjct: 816  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDVSIKYDATVRNSLG 875

Query: 464  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 523
            DVIQF YGEDG+D  ++E+Q +DSL+    E ER++R++ +  ++   +M P  +E ++ 
Sbjct: 876  DVIQFAYGEDGIDGCFVENQSIDSLRKDNTELERMYRHQVDKPDYGDGWMDPLVIEHVRN 935

Query: 524  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 583
                R+  E E +++++DR  L  EI  +GE +WP+PVNL+RLI NAQK F ID RR SD
Sbjct: 936  DSLTRDTLEKEFERIKSDRSLLRNEIIPSGEANWPLPVNLRRLINNAQKLFNIDIRRVSD 995

Query: 584  MHPMEIVEAIDKLQERLKVVPGEDPLS---------VEAQKNATLFFNILLRSTFASKRV 643
            ++P  +V  I+KL  RLK++   D             E   NAT+ F+IL+RSTFASKRV
Sbjct: 996  LNPAVVVLEIEKLVARLKIIATADTTEDDENFNRAWAEVYFNATMLFSILVRSTFASKRV 1055

Query: 644  LDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 703
            L E+RLT +AF WV GEIES+FLQ+L  PGEM+G +AAQSIGEPATQMTLNTFHYAGVS+
Sbjct: 1056 LTEFRLTEKAFLWVCGEIESKFLQALAHPGEMVGALAAQSIGEPATQMTLNTFHYAGVSS 1115

Query: 704  KNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATE 763
            KNVTLGVPRL+EIIN+AK++KTPSL++YLKP   +  +RAK V+  LEYTTL +VT ATE
Sbjct: 1116 KNVTLGVPRLKEIINIAKQVKTPSLTIYLKPHMARDMDRAKIVKSQLEYTTLANVTSATE 1175

Query: 764  VWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIA 823
            ++YDPDP +TII ED +FV SY+E+PDEEI    +SPWLLRIEL+R M+ DKKL+MA+I 
Sbjct: 1176 IYYDPDPQNTIISEDAEFVNSYFELPDEEIDVHSMSPWLLRIELDRGMVTDKKLTMADIT 1235

Query: 824  EKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTE 883
            + +  +F   L CIF+DDNAEKLILRIR++  +  KG   D   +DD FL++IESNML+E
Sbjct: 1236 QCVVRDFGLSLNCIFSDDNAEKLILRIRMVESQETKGTDND---DDDQFLRRIESNMLSE 1295

Query: 884  MALRGIPDINKVFIKC-GKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTS 943
            M LRGI  I KVF++   K+ K  EN GF    EW+LDT+GV+LL VM H DVD  RTTS
Sbjct: 1296 MVLRGIKGIKKVFMRTDDKIPKVTENGGFGVREEWILDTDGVSLLEVMSHPDVDHTRTTS 1355

Query: 944  NHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGI 1003
            N ++E+I+VLGIEAVR +LL ELR VISFDGSYVNYRHLAIL D MTYRGHLMAITRHGI
Sbjct: 1356 NDIVEIIQVLGIEAVRNALLKELRAVISFDGSYVNYRHLAILADVMTYRGHLMAITRHGI 1415

Query: 1004 NRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEM 1063
            NR +TGP+MRCSFEETV+IL+DAA+++ETD ++GVTENI+LGQL P+GTG   ++LN +M
Sbjct: 1416 NRVETGPLMRCSFEETVEILMDAAMFSETDDVKGVTENIILGQLPPLGTGSFEVFLNQDM 1475

Query: 1064 LKNAIELQLP-----SYIDGLDFGMTPSRSPISG--TPYHEGMMSPNYLLSPNLRLSPIS 1123
            +KNA  + LP     SY D      TPS S   G  TP+H    +P         LSP +
Sbjct: 1476 IKNAHSIALPEPSNVSYPD-TPGSQTPSYSYGDGSTTPFHNPYDAP---------LSPFN 1535

Query: 1124 DAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTS 1183
            +     + G  + S  +SPGY+ ++  Y  SS  Y P SP YSPTSP YSPTSP YSPTS
Sbjct: 1536 ET----FRGDFSPSAMNSPGYN-ANKSYG-SSYQYFPQSPTYSPTSPSYSPTSPSYSPTS 1595

Query: 1184 PTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1243
            P+YSP+SP YSPTSP+YSPTSPSYSPTSP YSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
Sbjct: 1596 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1655

Query: 1244 PTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1303
            PTSP+YSPTSP+YSPTSP+YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP+SP
Sbjct: 1656 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1715

Query: 1304 SYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTS 1321
            SYSP+SP+YSP+SP YSP+SP+++    +Y P +
Sbjct: 1716 SYSPSSPSYSPSSPSYSPSSPTFT-NKYNYQPNN 1724

[Close]

BLAST of Pay0001983 vs. ExPASy TrEMBL
Match: A0A5A7UGR7 (DNA-directed RNA polymerase subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold344G00420 PE=3 SV=1)

HSP 1 Score: 2530.0 bits (6556), Expect = 0.0e+00
Identity = 1315/1335 (98.50%), Postives = 1323/1335 (99.10%), Query Frame = 0


Query: 104  LATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 163
            + + +S RP+  I+  +    ++ CRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL
Sbjct: 563  IVSPQSNRPVMGIVQDT----LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 622

Query: 164  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA 223
            KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA
Sbjct: 623  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA 682

Query: 224  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 283
            LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE
Sbjct: 683  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 742

Query: 284  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 343
            TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN
Sbjct: 743  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 802

Query: 344  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 403
            NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE
Sbjct: 803  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 862

Query: 404  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 463
            NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG
Sbjct: 863  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 922

Query: 464  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 523
            DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT
Sbjct: 923  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 982

Query: 524  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 583
            IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD
Sbjct: 983  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 1042

Query: 584  MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 643
            MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE
Sbjct: 1043 MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 1102

Query: 644  AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 703
            AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR
Sbjct: 1103 AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 1162

Query: 704  LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 763
            LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS
Sbjct: 1163 LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 1222

Query: 764  TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 823
            TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD
Sbjct: 1223 TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 1282

Query: 824  DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 883
            DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI
Sbjct: 1283 DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 1342

Query: 884  NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL 943
            NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL
Sbjct: 1343 NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL 1402

Query: 944  GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1003
            GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR
Sbjct: 1403 GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1462

Query: 1004 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1063
            CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP
Sbjct: 1463 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1522

Query: 1064 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1123
            SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS
Sbjct: 1523 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1582

Query: 1124 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1183
            SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY
Sbjct: 1583 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1642

Query: 1184 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1243
            SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS
Sbjct: 1643 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1702

Query: 1244 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1303
            PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS
Sbjct: 1703 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1762

Query: 1304 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1363
            PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY
Sbjct: 1763 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1822

Query: 1364 SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT 1423
            SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT
Sbjct: 1823 SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT 1882

Query: 1424 SDKDDRSRKDDRNNR 1439
            SDKDDRSRKDDRNNR
Sbjct: 1883 SDKDDRSRKDDRNNR 1893

[Close]

BLAST of Pay0001983 vs. ExPASy TrEMBL
Match: A0A5D3CJC8 (DNA-directed RNA polymerase subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00440 PE=3 SV=1)

HSP 1 Score: 2530.0 bits (6556), Expect = 0.0e+00
Identity = 1315/1335 (98.50%), Postives = 1323/1335 (99.10%), Query Frame = 0


Query: 104  LATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 163
            + + +S RP+  I+  +    ++ CRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL
Sbjct: 559  IVSPQSNRPVMGIVQDT----LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 618

Query: 164  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA 223
            KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA
Sbjct: 619  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA 678

Query: 224  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 283
            LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE
Sbjct: 679  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 738

Query: 284  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 343
            TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN
Sbjct: 739  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 798

Query: 344  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 403
            NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE
Sbjct: 799  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 858

Query: 404  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 463
            NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG
Sbjct: 859  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 918

Query: 464  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 523
            DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT
Sbjct: 919  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 978

Query: 524  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 583
            IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD
Sbjct: 979  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 1038

Query: 584  MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 643
            MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE
Sbjct: 1039 MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 1098

Query: 644  AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 703
            AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR
Sbjct: 1099 AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 1158

Query: 704  LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 763
            LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS
Sbjct: 1159 LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 1218

Query: 764  TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 823
            TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD
Sbjct: 1219 TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 1278

Query: 824  DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 883
            DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI
Sbjct: 1279 DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 1338

Query: 884  NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL 943
            NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL
Sbjct: 1339 NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL 1398

Query: 944  GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1003
            GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR
Sbjct: 1399 GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1458

Query: 1004 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1063
            CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP
Sbjct: 1459 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1518

Query: 1064 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1123
            SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS
Sbjct: 1519 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1578

Query: 1124 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1183
            SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY
Sbjct: 1579 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1638

Query: 1184 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1243
            SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS
Sbjct: 1639 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1698

Query: 1244 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1303
            PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS
Sbjct: 1699 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1758

Query: 1304 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1363
            PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY
Sbjct: 1759 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1818

Query: 1364 SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT 1423
            SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT
Sbjct: 1819 SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT 1878

Query: 1424 SDKDDRSRKDDRNNR 1439
            SDKDDRSRKDDRNNR
Sbjct: 1879 SDKDDRSRKDDRNNR 1889

[Close]

BLAST of Pay0001983 vs. ExPASy TrEMBL
Match: A0A0A0L655 (DNA-directed RNA polymerase subunit OS=Cucumis sativus OX=3659 GN=Csa_3G002510 PE=3 SV=1)

HSP 1 Score: 2510.3 bits (6505), Expect = 0.0e+00
Identity = 1310/1348 (97.18%), Postives = 1319/1348 (97.85%), Query Frame = 0


Query: 104  LATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 163
            + + +S RP+  I+  +    ++ CRKITKRDTFITKDVFMN LMWWEDFDGKIPAPAIL
Sbjct: 524  IVSPQSNRPVMGIVQDT----LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAIL 583

Query: 164  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA 223
            KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGH+TPGDTFVRIEKGELLSGTLCKKA
Sbjct: 584  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKA 643

Query: 224  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 283
            LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE
Sbjct: 644  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 703

Query: 284  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 343
            TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN
Sbjct: 704  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 763

Query: 344  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 403
            NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE
Sbjct: 764  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 823

Query: 404  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 463
            NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG
Sbjct: 824  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 883

Query: 464  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 523
            DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT
Sbjct: 884  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 943

Query: 524  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 583
            IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD
Sbjct: 944  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 1003

Query: 584  MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 643
            MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE
Sbjct: 1004 MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 1063

Query: 644  AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 703
            AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR
Sbjct: 1064 AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 1123

Query: 704  LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 763
            LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS
Sbjct: 1124 LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 1183

Query: 764  TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 823
            TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD
Sbjct: 1184 TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 1243

Query: 824  DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 883
            DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI
Sbjct: 1244 DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 1303

Query: 884  NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL 943
            NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVM HEDVDARRTTSNHLIEVIEVL
Sbjct: 1304 NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVL 1363

Query: 944  GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1003
            GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR
Sbjct: 1364 GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1423

Query: 1004 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1063
            CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP
Sbjct: 1424 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1483

Query: 1064 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1123
            SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS
Sbjct: 1484 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1543

Query: 1124 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1183
            SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY
Sbjct: 1544 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1603

Query: 1184 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1243
            SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS
Sbjct: 1604 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1663

Query: 1244 PA--------------YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1303
            PA              YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
Sbjct: 1664 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1723

Query: 1304 PTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPY 1363
            PTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAY PSSPRLSPSSPY
Sbjct: 1724 PTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYLPSSPRLSPSSPY 1783

Query: 1364 SPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAP 1423
            SPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAP
Sbjct: 1784 SPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAP 1843

Query: 1424 GYSPSSTSQYTPQTSDKDDRSRKDDRNN 1438
            GYSPSSTSQYTPQTSDKDDRSRKDDRNN
Sbjct: 1844 GYSPSSTSQYTPQTSDKDDRSRKDDRNN 1867

[Close]

BLAST of Pay0001983 vs. ExPASy TrEMBL
Match: A0A6J1ELE9 (DNA-directed RNA polymerase subunit OS=Cucurbita moschata OX=3662 GN=LOC111435248 PE=3 SV=1)

HSP 1 Score: 2500.7 bits (6480), Expect = 0.0e+00
Identity = 1298/1335 (97.23%), Postives = 1318/1335 (98.73%), Query Frame = 0


Query: 104  LATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 163
            + + +S RP+  I+  +    ++ CRKITKRDTFITKDVFMNILMWWEDFDGK+PAPAIL
Sbjct: 524  IVSPQSNRPVMGIVQDT----LLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAIL 583

Query: 164  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA 223
            KPQPLWTGKQVFNLIIPKQINL+RTSAWHSESE+G +TPGDTFVRIEKGELLSGTLCKK 
Sbjct: 584  KPQPLWTGKQVFNLIIPKQINLSRTSAWHSESESGFITPGDTFVRIEKGELLSGTLCKKT 643

Query: 224  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 283
            LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE
Sbjct: 644  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 703

Query: 284  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 343
            TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN
Sbjct: 704  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 763

Query: 344  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 403
            NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE
Sbjct: 764  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 823

Query: 404  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 463
            NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG
Sbjct: 824  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 883

Query: 464  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 523
            DVIQFLYGEDGMD+VWIESQKLDSLKMKKKEFERIFRYEFEDENWKP+YMLPEHVEDLKT
Sbjct: 884  DVIQFLYGEDGMDSVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPSYMLPEHVEDLKT 943

Query: 524  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 583
            IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD
Sbjct: 944  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 1003

Query: 584  MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 643
            MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE
Sbjct: 1004 MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 1063

Query: 644  AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 703
            AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR
Sbjct: 1064 AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 1123

Query: 704  LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 763
            LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS
Sbjct: 1124 LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 1183

Query: 764  TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 823
            TIIEED+DFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD
Sbjct: 1184 TIIEEDMDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 1243

Query: 824  DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 883
            DLTCIFNDDNAEKLILRIRIMNDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDI
Sbjct: 1244 DLTCIFNDDNAEKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDI 1303

Query: 884  NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL 943
            NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAV+CHEDVDARRTTSNHLIEVIEVL
Sbjct: 1304 NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVL 1363

Query: 944  GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1003
            GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR
Sbjct: 1364 GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1423

Query: 1004 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1063
            CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP
Sbjct: 1424 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1483

Query: 1064 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1123
            SYIDGL+FGMTPSRSPISGTPYHEGMMSP+YLLSPNLRLSPISDAQFSPYVGGMAFSPTS
Sbjct: 1484 SYIDGLEFGMTPSRSPISGTPYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1543

Query: 1124 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1183
            SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY
Sbjct: 1544 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1603

Query: 1184 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1243
            SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS
Sbjct: 1604 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1663

Query: 1244 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1303
            PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS
Sbjct: 1664 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1723

Query: 1304 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1363
            PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY
Sbjct: 1724 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1783

Query: 1364 SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT 1423
            SPTSPAYSPSSPTYSPSSPYNTG SPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYT QT
Sbjct: 1784 SPTSPAYSPSSPTYSPSSPYNTGASPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTSQT 1843

Query: 1424 SDKDDRSRKDDRNNR 1439
            +DKDDRSRKDDR+NR
Sbjct: 1844 TDKDDRSRKDDRSNR 1854

[Close]

BLAST of Pay0001983 vs. ExPASy TrEMBL
Match: A0A6J1CV04 (DNA-directed RNA polymerase subunit OS=Momordica charantia OX=3673 GN=LOC111014830 PE=3 SV=1)

HSP 1 Score: 2500.3 bits (6479), Expect = 0.0e+00
Identity = 1297/1335 (97.15%), Postives = 1319/1335 (98.80%), Query Frame = 0


Query: 104  LATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 163
            + + +S RP+  I+  +    ++ CRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL
Sbjct: 524  IVSPQSNRPVMGIVQDT----LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 583

Query: 164  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA 223
            KPQPLWTGKQVFNLIIPKQINLTRTSAWH+ESETG +TPGDTFVRIEKGEL+SGTLCKKA
Sbjct: 584  KPQPLWTGKQVFNLIIPKQINLTRTSAWHAESETGFITPGDTFVRIEKGELISGTLCKKA 643

Query: 224  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 283
            LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE
Sbjct: 644  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 703

Query: 284  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 343
            TIS AKNEVKNLIKKAQERSLEPEPGRTMM+SFENKVNQVLNKARDDAGSSAQKSLSESN
Sbjct: 704  TISLAKNEVKNLIKKAQERSLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESN 763

Query: 344  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 403
            NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE
Sbjct: 764  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 823

Query: 404  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 463
            NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG
Sbjct: 824  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 883

Query: 464  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 523
            DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT
Sbjct: 884  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 943

Query: 524  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 583
            IREFRNVFEAEVQKLEADR+QLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD
Sbjct: 944  IREFRNVFEAEVQKLEADRFQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 1003

Query: 584  MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 643
            MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATL FNILLRSTFASKRVLDEYRLTRE
Sbjct: 1004 MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLLFNILLRSTFASKRVLDEYRLTRE 1063

Query: 644  AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 703
            AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR
Sbjct: 1064 AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 1123

Query: 704  LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 763
            LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS
Sbjct: 1124 LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 1183

Query: 764  TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 823
            TIIEEDIDFVKSYYEMPDEEI+P+KISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD
Sbjct: 1184 TIIEEDIDFVKSYYEMPDEEISPDKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 1243

Query: 824  DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 883
            DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI
Sbjct: 1244 DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 1303

Query: 884  NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL 943
            NKVFIKCGKVNKFDE EGFKPEMEWMLDTEGVNLLAV+CHEDVDA+RTTSNHLIEVIEVL
Sbjct: 1304 NKVFIKCGKVNKFDEYEGFKPEMEWMLDTEGVNLLAVICHEDVDAKRTTSNHLIEVIEVL 1363

Query: 944  GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1003
            GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR
Sbjct: 1364 GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1423

Query: 1004 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1063
            CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP
Sbjct: 1424 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1483

Query: 1064 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1123
            SYIDGLDFGMTPSRSPISGTPYHEGMMSP+YLLSPNLRLSPISDAQFSPYVGGMAFSPTS
Sbjct: 1484 SYIDGLDFGMTPSRSPISGTPYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1543

Query: 1124 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1183
            SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY
Sbjct: 1544 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1603

Query: 1184 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1243
            SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS
Sbjct: 1604 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1663

Query: 1244 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1303
            PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS
Sbjct: 1664 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1723

Query: 1304 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1363
            PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY
Sbjct: 1724 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1783

Query: 1364 SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT 1423
            SPTSPAYSPSSPTYSPSSPYNTGPSP++SPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT
Sbjct: 1784 SPTSPAYSPSSPTYSPSSPYNTGPSPEFSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT 1843

Query: 1424 SDKDDRSRKDDRNNR 1439
            S+KDDRSRKDDR+NR
Sbjct: 1844 SEKDDRSRKDDRSNR 1854

[Close]

BLAST of Pay0001983 vs. NCBI nr
Match: TYK11392.1 (DNA-directed RNA polymerase II subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 2530.0 bits (6556), Expect = 0.0e+00
Identity = 1315/1335 (98.50%), Postives = 1323/1335 (99.10%), Query Frame = 0


Query: 104  LATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 163
            + + +S RP+  I+  +    ++ CRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL
Sbjct: 559  IVSPQSNRPVMGIVQDT----LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 618

Query: 164  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA 223
            KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA
Sbjct: 619  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA 678

Query: 224  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 283
            LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE
Sbjct: 679  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 738

Query: 284  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 343
            TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN
Sbjct: 739  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 798

Query: 344  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 403
            NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE
Sbjct: 799  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 858

Query: 404  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 463
            NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG
Sbjct: 859  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 918

Query: 464  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 523
            DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT
Sbjct: 919  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 978

Query: 524  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 583
            IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD
Sbjct: 979  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 1038

Query: 584  MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 643
            MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE
Sbjct: 1039 MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 1098

Query: 644  AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 703
            AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR
Sbjct: 1099 AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 1158

Query: 704  LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 763
            LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS
Sbjct: 1159 LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 1218

Query: 764  TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 823
            TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD
Sbjct: 1219 TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 1278

Query: 824  DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 883
            DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI
Sbjct: 1279 DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 1338

Query: 884  NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL 943
            NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL
Sbjct: 1339 NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL 1398

Query: 944  GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1003
            GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR
Sbjct: 1399 GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1458

Query: 1004 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1063
            CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP
Sbjct: 1459 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1518

Query: 1064 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1123
            SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS
Sbjct: 1519 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1578

Query: 1124 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1183
            SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY
Sbjct: 1579 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1638

Query: 1184 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1243
            SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS
Sbjct: 1639 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1698

Query: 1244 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1303
            PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS
Sbjct: 1699 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1758

Query: 1304 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1363
            PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY
Sbjct: 1759 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1818

Query: 1364 SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT 1423
            SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT
Sbjct: 1819 SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT 1878

Query: 1424 SDKDDRSRKDDRNNR 1439
            SDKDDRSRKDDRNNR
Sbjct: 1879 SDKDDRSRKDDRNNR 1889

[Close]

BLAST of Pay0001983 vs. NCBI nr
Match: KAA0052935.1 (DNA-directed RNA polymerase II subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 2530.0 bits (6556), Expect = 0.0e+00
Identity = 1315/1335 (98.50%), Postives = 1323/1335 (99.10%), Query Frame = 0


Query: 104  LATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 163
            + + +S RP+  I+  +    ++ CRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL
Sbjct: 563  IVSPQSNRPVMGIVQDT----LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 622

Query: 164  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA 223
            KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA
Sbjct: 623  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA 682

Query: 224  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 283
            LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE
Sbjct: 683  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 742

Query: 284  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 343
            TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN
Sbjct: 743  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 802

Query: 344  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 403
            NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE
Sbjct: 803  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 862

Query: 404  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 463
            NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG
Sbjct: 863  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 922

Query: 464  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 523
            DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT
Sbjct: 923  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 982

Query: 524  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 583
            IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD
Sbjct: 983  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 1042

Query: 584  MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 643
            MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE
Sbjct: 1043 MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 1102

Query: 644  AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 703
            AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR
Sbjct: 1103 AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 1162

Query: 704  LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 763
            LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS
Sbjct: 1163 LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 1222

Query: 764  TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 823
            TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD
Sbjct: 1223 TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 1282

Query: 824  DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 883
            DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI
Sbjct: 1283 DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 1342

Query: 884  NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL 943
            NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL
Sbjct: 1343 NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL 1402

Query: 944  GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1003
            GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR
Sbjct: 1403 GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1462

Query: 1004 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1063
            CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP
Sbjct: 1463 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1522

Query: 1064 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1123
            SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS
Sbjct: 1523 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1582

Query: 1124 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1183
            SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY
Sbjct: 1583 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1642

Query: 1184 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1243
            SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS
Sbjct: 1643 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1702

Query: 1244 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1303
            PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS
Sbjct: 1703 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1762

Query: 1304 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1363
            PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY
Sbjct: 1763 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1822

Query: 1364 SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT 1423
            SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT
Sbjct: 1823 SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT 1882

Query: 1424 SDKDDRSRKDDRNNR 1439
            SDKDDRSRKDDRNNR
Sbjct: 1883 SDKDDRSRKDDRNNR 1893

[Close]

BLAST of Pay0001983 vs. NCBI nr
Match: XP_004146161.3 (DNA-directed RNA polymerase II subunit 1 [Cucumis sativus] >XP_011650276.2 DNA-directed RNA polymerase II subunit 1 [Cucumis sativus] >KAE8649994.1 hypothetical protein Csa_011172 [Cucumis sativus])

HSP 1 Score: 2520.0 bits (6530), Expect = 0.0e+00
Identity = 1310/1334 (98.20%), Postives = 1319/1334 (98.88%), Query Frame = 0


Query: 104  LATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 163
            + + +S RP+  I+  +    ++ CRKITKRDTFITKDVFMN LMWWEDFDGKIPAPAIL
Sbjct: 524  IVSPQSNRPVMGIVQDT----LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAIL 583

Query: 164  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA 223
            KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGH+TPGDTFVRIEKGELLSGTLCKKA
Sbjct: 584  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKA 643

Query: 224  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 283
            LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE
Sbjct: 644  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 703

Query: 284  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 343
            TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN
Sbjct: 704  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 763

Query: 344  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 403
            NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE
Sbjct: 764  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 823

Query: 404  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 463
            NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG
Sbjct: 824  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 883

Query: 464  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 523
            DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT
Sbjct: 884  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 943

Query: 524  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 583
            IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD
Sbjct: 944  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 1003

Query: 584  MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 643
            MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE
Sbjct: 1004 MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 1063

Query: 644  AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 703
            AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR
Sbjct: 1064 AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 1123

Query: 704  LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 763
            LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS
Sbjct: 1124 LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 1183

Query: 764  TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 823
            TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD
Sbjct: 1184 TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 1243

Query: 824  DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 883
            DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI
Sbjct: 1244 DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 1303

Query: 884  NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL 943
            NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVM HEDVDARRTTSNHLIEVIEVL
Sbjct: 1304 NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVL 1363

Query: 944  GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1003
            GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR
Sbjct: 1364 GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1423

Query: 1004 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1063
            CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP
Sbjct: 1424 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1483

Query: 1064 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1123
            SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS
Sbjct: 1484 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1543

Query: 1124 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1183
            SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY
Sbjct: 1544 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1603

Query: 1184 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1243
            SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS
Sbjct: 1604 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1663

Query: 1244 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1303
            PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS
Sbjct: 1664 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1723

Query: 1304 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1363
            PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAY PSSPRLSPSSPYSPTSPNYSPTSPSY
Sbjct: 1724 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYLPSSPRLSPSSPYSPTSPNYSPTSPSY 1783

Query: 1364 SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT 1423
            SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT
Sbjct: 1784 SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT 1843

Query: 1424 SDKDDRSRKDDRNN 1438
            SDKDDRSRKDDRNN
Sbjct: 1844 SDKDDRSRKDDRNN 1853

[Close]

BLAST of Pay0001983 vs. NCBI nr
Match: XP_038904743.1 (DNA-directed RNA polymerase II subunit RPB1 [Benincasa hispida])

HSP 1 Score: 2507.6 bits (6498), Expect = 0.0e+00
Identity = 1306/1335 (97.83%), Postives = 1315/1335 (98.50%), Query Frame = 0


Query: 104  LATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 163
            + + +S RP+  I+  +    ++ CRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL
Sbjct: 524  IVSPQSNRPVMGIVQDT----LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 583

Query: 164  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA 223
            KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETG +TPGDTFVRIEKGELLSGTLCKKA
Sbjct: 584  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGFITPGDTFVRIEKGELLSGTLCKKA 643

Query: 224  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 283
            LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE
Sbjct: 644  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 703

Query: 284  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 343
            TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN
Sbjct: 704  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 763

Query: 344  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 403
            NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE
Sbjct: 764  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 823

Query: 404  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 463
            NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG
Sbjct: 824  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 883

Query: 464  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 523
            DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT
Sbjct: 884  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 943

Query: 524  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 583
            IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD
Sbjct: 944  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 1003

Query: 584  MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 643
            MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE
Sbjct: 1004 MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 1063

Query: 644  AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 703
            AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR
Sbjct: 1064 AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 1123

Query: 704  LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 763
            LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS
Sbjct: 1124 LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 1183

Query: 764  TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 823
            TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD
Sbjct: 1184 TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 1243

Query: 824  DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 883
            DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI
Sbjct: 1244 DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 1303

Query: 884  NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL 943
            NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL
Sbjct: 1304 NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL 1363

Query: 944  GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1003
            GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR
Sbjct: 1364 GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1423

Query: 1004 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1063
            CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP
Sbjct: 1424 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1483

Query: 1064 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1123
            SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS
Sbjct: 1484 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1543

Query: 1124 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1183
            SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY
Sbjct: 1544 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1603

Query: 1184 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1243
            SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS
Sbjct: 1604 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1663

Query: 1244 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1303
            PA       YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS
Sbjct: 1664 PA-------YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1723

Query: 1304 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1363
            PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY
Sbjct: 1724 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1783

Query: 1364 SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT 1423
            SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT
Sbjct: 1784 SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT 1843

Query: 1424 SDKDDRSRKDDRNNR 1439
            SDKDDRSRKDDRNNR
Sbjct: 1844 SDKDDRSRKDDRNNR 1847

[Close]

BLAST of Pay0001983 vs. NCBI nr
Match: XP_022928584.1 (DNA-directed RNA polymerase II subunit 1 [Cucurbita moschata] >XP_022928634.1 DNA-directed RNA polymerase II subunit 1 [Cucurbita moschata])

HSP 1 Score: 2500.7 bits (6480), Expect = 0.0e+00
Identity = 1298/1335 (97.23%), Postives = 1318/1335 (98.73%), Query Frame = 0


Query: 104  LATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 163
            + + +S RP+  I+  +    ++ CRKITKRDTFITKDVFMNILMWWEDFDGK+PAPAIL
Sbjct: 524  IVSPQSNRPVMGIVQDT----LLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAIL 583

Query: 164  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA 223
            KPQPLWTGKQVFNLIIPKQINL+RTSAWHSESE+G +TPGDTFVRIEKGELLSGTLCKK 
Sbjct: 584  KPQPLWTGKQVFNLIIPKQINLSRTSAWHSESESGFITPGDTFVRIEKGELLSGTLCKKT 643

Query: 224  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 283
            LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE
Sbjct: 644  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 703

Query: 284  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 343
            TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN
Sbjct: 704  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 763

Query: 344  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 403
            NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE
Sbjct: 764  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 823

Query: 404  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 463
            NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG
Sbjct: 824  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 883

Query: 464  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 523
            DVIQFLYGEDGMD+VWIESQKLDSLKMKKKEFERIFRYEFEDENWKP+YMLPEHVEDLKT
Sbjct: 884  DVIQFLYGEDGMDSVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPSYMLPEHVEDLKT 943

Query: 524  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 583
            IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD
Sbjct: 944  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 1003

Query: 584  MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 643
            MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE
Sbjct: 1004 MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 1063

Query: 644  AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 703
            AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR
Sbjct: 1064 AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 1123

Query: 704  LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 763
            LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS
Sbjct: 1124 LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 1183

Query: 764  TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 823
            TIIEED+DFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD
Sbjct: 1184 TIIEEDMDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 1243

Query: 824  DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 883
            DLTCIFNDDNAEKLILRIRIMNDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDI
Sbjct: 1244 DLTCIFNDDNAEKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDI 1303

Query: 884  NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL 943
            NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAV+CHEDVDARRTTSNHLIEVIEVL
Sbjct: 1304 NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVL 1363

Query: 944  GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1003
            GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR
Sbjct: 1364 GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1423

Query: 1004 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1063
            CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP
Sbjct: 1424 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1483

Query: 1064 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1123
            SYIDGL+FGMTPSRSPISGTPYHEGMMSP+YLLSPNLRLSPISDAQFSPYVGGMAFSPTS
Sbjct: 1484 SYIDGLEFGMTPSRSPISGTPYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1543

Query: 1124 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1183
            SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY
Sbjct: 1544 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1603

Query: 1184 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1243
            SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS
Sbjct: 1604 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1663

Query: 1244 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1303
            PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS
Sbjct: 1664 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1723

Query: 1304 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1363
            PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY
Sbjct: 1724 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1783

Query: 1364 SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT 1423
            SPTSPAYSPSSPTYSPSSPYNTG SPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYT QT
Sbjct: 1784 SPTSPAYSPSSPTYSPSSPYNTGASPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTSQT 1843

Query: 1424 SDKDDRSRKDDRNNR 1439
            +DKDDRSRKDDR+NR
Sbjct: 1844 TDKDDRSRKDDRSNR 1854

[Close]

BLAST of Pay0001983 vs. TAIR 10
Match: AT4G35800.1 (RNA polymerase II large subunit )

HSP 1 Score: 2215.3 bits (5739), Expect = 0.0e+00
Identity = 1148/1331 (86.25%), Postives = 1230/1331 (92.41%), Query Frame = 0


Query: 104  LATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAIL 163
            + + ++ RP+  I+  +    ++ CRKITKRDTFI KDVFMN LMWWEDFDGK+PAPAIL
Sbjct: 525  IVSPQANRPVMGIVQDT----LLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAIL 584

Query: 164  KPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKA 223
            KP+PLWTGKQVFNLIIPKQINL R SAWH+++ETG +TPGDT VRIE+GELL+GTLCKK 
Sbjct: 585  KPRPLWTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKT 644

Query: 224  LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE 283
            LGTS GSL+HVIWEEVGPDAARKFLGHTQWLVNYWLLQN F+IGIGDTIAD++TMEKINE
Sbjct: 645  LGTSNGSLVHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFTIGIGDTIADSSTMEKINE 704

Query: 284  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESN 343
            TIS AK  VK+LI++ Q + L+PEPGRTM D+FEN+VNQVLNKARDDAGSSAQKSL+E+N
Sbjct: 705  TISNAKTAVKDLIRQFQGKELDPEPGRTMRDTFENRVNQVLNKARDDAGSSAQKSLAETN 764

Query: 344  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE 403
            NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF  RTLPHFTKDDYGPESRGFVE
Sbjct: 765  NLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFDGRTLPHFTKDDYGPESRGFVE 824

Query: 404  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 463
            NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG
Sbjct: 825  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLG 884

Query: 464  DVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKT 523
            DVIQFLYGEDGMDAVWIESQKLDSLKMKK EF+R F+YE +DENW P Y+  EH+EDLK 
Sbjct: 885  DVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDRTFKYEIDDENWNPTYLSDEHLEDLKG 944

Query: 524  IREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD 583
            IRE R+VF+AE  KLE DR+QLGTEIAT G+++WP+PVN+KR I NAQKTFKID R+ SD
Sbjct: 945  IRELRDVFDAEYSKLETDRFQLGTEIATNGDSTWPLPVNIKRHIWNAQKTFKIDLRKISD 1004

Query: 584  MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTRE 643
            MHP+EIV+A+DKLQERL VVPG+D LSVEAQKNATLFFNILLRST ASKRVL+EY+L+RE
Sbjct: 1005 MHPVEIVDAVDKLQERLLVVPGDDALSVEAQKNATLFFNILLRSTLASKRVLEEYKLSRE 1064

Query: 644  AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 703
            AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR
Sbjct: 1065 AFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR 1124

Query: 704  LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMS 763
            LREIINVAKRIKTPSLSVYL PEA+K+KE AKTVQCALEYTTLRSVTQATEVWYDPDPMS
Sbjct: 1125 LREIINVAKRIKTPSLSVYLTPEASKSKEGAKTVQCALEYTTLRSVTQATEVWYDPDPMS 1184

Query: 764  TIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDD 823
            TIIEED +FV+SYYEMPDE+++P+KISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDD
Sbjct: 1185 TIIEEDFEFVRSYYEMPDEDVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDD 1244

Query: 824  DLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI 883
            DLTCIFNDDNA+KLILRIRIMNDE PKGEL DESAEDDVFLKKIESNMLTEMALRGIPDI
Sbjct: 1245 DLTCIFNDDNAQKLILRIRIMNDEGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDI 1304

Query: 884  NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVL 943
            NKVFIK  + ++FDE  GFK   EWMLDTEGVNLLAVMCHEDVD +RTTSNHLIE+IEVL
Sbjct: 1305 NKVFIKQVRKSRFDEEGGFKTSEEWMLDTEGVNLLAVMCHEDVDPKRTTSNHLIEIIEVL 1364

Query: 944  GIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMR 1003
            GIEAVRR+LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MR
Sbjct: 1365 GIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMR 1424

Query: 1004 CSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP 1063
            CSFEETVDILLDAA YAETD LRGVTENIMLGQLAPIGTG C LYLNDEMLKNAIELQLP
Sbjct: 1425 CSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYLNDEMLKNAIELQLP 1484

Query: 1064 SYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTS 1123
            SY+DGL+FGMTP+RSP+SGTPYHEGMMSPNYLLSPN+RLSP+SDAQFSPYVGGMAFSP+ 
Sbjct: 1485 SYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS- 1544

Query: 1124 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1183
                  SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY
Sbjct: 1545 ------SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1604

Query: 1184 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1243
            SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS
Sbjct: 1605 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1664

Query: 1244 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1303
            PA       YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS
Sbjct: 1665 PA-------YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYS 1724

Query: 1304 PTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSY 1363
            PTSPSYSPTSPSY PTSPSYNPQSAKYSPS AYSPS+ RLSP+SPYSPTSPNYSPTSPSY
Sbjct: 1725 PTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSY 1784

Query: 1364 SPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQT 1423
            SPTSP+YSPSSPTYSPSSPY++G SPD       YSPSAGYSPT PGYSPSST QYTP  
Sbjct: 1785 SPTSPSYSPSSPTYSPSSPYSSGASPD-------YSPSAGYSPTLPGYSPSSTGQYTPHE 1830

Query: 1424 SDKDDRSRKDD 1435
             DK D++ K D
Sbjct: 1845 GDKKDKTGKKD 1830

[Close]

BLAST of Pay0001983 vs. TAIR 10
Match: AT5G60040.1 (nuclear RNA polymerase C1 )

HSP 1 Score: 399.4 bits (1025), Expect = 1.2e-110
Identity = 296/956 (30.96%), Postives = 450/956 (47.07%), Query Frame = 0


Query: 102  STLATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKI--PA 161
            + L T ++G     I++ S    +     IT++DTF  +  F  I  +  D    I  P 
Sbjct: 527  NNLCTPKNG----EILVASTQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPT 586

Query: 162  PAILKPQPLWTGKQVFNLIIPKQINL-----------TRTSAWHSESETGHVTPGDTFVR 221
            P ILKP  LWTGKQ+F++++    ++                 H   ET  +  G  +V 
Sbjct: 587  PTILKPIELWTGKQIFSVLLRPNASIRVYVTLNVKEKNFKKGEHGFDETMCINDG--WVY 646

Query: 222  IEKGELLSGTLCKKALGT-STGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIG 281
                EL+SG L K  LG  +   L  ++  +    AA   +     L   W+  + FSIG
Sbjct: 647  FRNSELISGQLGKATLGNGNKDGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIG 706

Query: 282  IGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKA 341
            I D        ++  ++I    ++    I++    +L+ + G     S E ++  +LN  
Sbjct: 707  IDDVQPGEELSKERKDSIQFGYDQCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTI 766

Query: 342  RDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLP 401
            R+  G +    L   N+   M   GSKGS INISQM ACVGQQ V G R P GFIDR+LP
Sbjct: 767  REATGKACMSGLHWRNSPLIMSQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLP 826

Query: 402  HFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAM 461
            HF +    P ++GFV NS+  GLT  EFFFH MGGREGL+DTAVKT+ TGY+ RRL+KA+
Sbjct: 827  HFPRMSKSPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKAL 886

Query: 462  EDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDEN 521
            ED++V YD TVRN+ G ++QF YG+DGMD   +E +    L      F R+F    + + 
Sbjct: 887  EDLLVHYDNTVRNASGCILQFTYGDDGMDPALMEGKDGAPL-----NFNRLF---LKVQA 946

Query: 522  WKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLI 581
              P    P       +  E    FE E+  +  D+ ++ T+                   
Sbjct: 947  TCP----PRSHHTYLSSEELSQKFEEEL--VRHDKSRVCTD------------------- 1006

Query: 582  QNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRS 641
                                  V+++ +    L V     P              +L ++
Sbjct: 1007 --------------------AFVKSLREFVSLLGVKSASPP-------------QVLYKA 1066

Query: 642  TFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTF 701
            +  + + L+ +          +     R+ +  +  G  IG + AQSIGEP TQMTL TF
Sbjct: 1067 SGVTDKQLEVF----------VKICVFRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTF 1126

Query: 702  HYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLR 761
            H+AGV++ N+T GVPR+ EIIN +K I TP +S  L+     T   A+ V+  +E TTL 
Sbjct: 1127 HFAGVASMNITQGVPRINEIINASKNISTPVISAELENPLELTS--ARWVKGRIEKTTLG 1186

Query: 762  SVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKK 821
             V ++ EV       S  I  D   +         E A   I+PW ++  + +   +   
Sbjct: 1187 QVAESIEVLMTSTSASVRIILDNKII---------EEACLSITPWSVKNSILKTPRI--- 1246

Query: 822  LSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKI 881
                    K+N   D+D                IR+++       + D+S     F    
Sbjct: 1247 --------KLN---DND----------------IRVLDTGLDITPVVDKSRAH--FNLHN 1306

Query: 882  ESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVD 941
              N+L  + + GI  + +V +        D+++    + +W L  EG NLLAVM    ++
Sbjct: 1307 LKNVLPNIIVNGIKTVERVVV----AEDMDKSKQIDGKTKWKLFVEGTNLLAVMGTPGIN 1353

Query: 942  ARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMA 1001
             R TTSN+++EV + LGIEA R +++DE+  V+   G  ++ RH+ +L D MTYRG ++ 
Sbjct: 1367 GRTTTSNNVVEVSKTLGIEAARTTIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLG 1353

Query: 1002 ITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTG 1044
            I R GI + D   +M+ SFE T D L  AA   + D++ GVTE +++G    +GTG
Sbjct: 1427 IQRTGIQKMDKSVLMQASFERTGDHLFSAAASGKVDNIEGVTECVIMGIPMKLGTG 1353

[Close]

BLAST of Pay0001983 vs. TAIR 10
Match: AT5G60040.2 (nuclear RNA polymerase C1 )

HSP 1 Score: 377.1 bits (967), Expect = 6.3e-104
Identity = 297/973 (30.52%), Postives = 446/973 (45.84%), Query Frame = 0


Query: 102  STLATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNILMWWEDFDGKI--PA 161
            + L T ++G     I++ S    +     IT++DTF  +  F  I  +  D    I  P 
Sbjct: 537  NNLCTPKNG----EILVASTQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPT 596

Query: 162  PAILKPQPLWTGKQVFNLIIPKQINL-----------TRTSAWHSESETGHVTPGDTFVR 221
            P ILKP  LWTGKQ+F++++    ++                 H   ET  +  G  +V 
Sbjct: 597  PTILKPIELWTGKQIFSVLLRPNASIRVYVTLNVKEKNFKKGEHGFDETMCINDG--WVY 656

Query: 222  IEKGELLSGTLCKKALGT--------STGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLL 281
                EL+SG L K  L          +   L  ++  +    AA   +     L   W+ 
Sbjct: 657  FRNSELISGQLGKATLALDIFPLGNGNKDGLYSILLRDYNSHAAAVCMNRLAKLSARWIG 716

Query: 282  QNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKV 341
             + FSIGI D        ++  ++I    ++    I++    +L+ + G     S E ++
Sbjct: 717  IHGFSIGIDDVQPGEELSKERKDSIQFGYDQCHRKIEEFNRGNLQLKAGLDGAKSLEAEI 776

Query: 342  NQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFG 401
              +LN  R+  G +    L   N+   M   GSKGS INISQM ACVGQQ V G R P G
Sbjct: 777  TGILNTIREATGKACMSGLHWRNSPLIMSQCGSKGSPINISQMVACVGQQTVNGHRAPDG 836

Query: 402  FIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQ 461
            FIDR+LPHF +    P ++GFV NS+  GLT  EFFFH MGGREGL+DTAVKT+ TGY+ 
Sbjct: 837  FIDRSLPHFPRMSKSPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTASTGYMS 896

Query: 462  RRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFR 521
            RRL+KA+ED++V YD TVRN+ G ++QF YG+DGMD   +E +    L      F R+F 
Sbjct: 897  RRLMKALEDLLVHYDNTVRNASGCILQFTYGDDGMDPALMEGKDGAPL-----NFNRLF- 956

Query: 522  YEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMP 581
               + +   P    P       +  E    FE E+  +  D+ ++ T+            
Sbjct: 957  --LKVQATCP----PRSHHTYLSSEELSQKFEEEL--VRHDKSRVCTD------------ 1016

Query: 582  VNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLF 641
                                         V+++ +    L V     P            
Sbjct: 1017 ---------------------------AFVKSLREFVSLLGVKSASPP------------ 1076

Query: 642  FNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPAT 701
              +L +++  + + L+ +          +     R+ +  +  G  IG + AQSIGEP T
Sbjct: 1077 -QVLYKASGVTDKQLEVF----------VKICVFRYREKKIEAGTAIGTIGAQSIGEPGT 1136

Query: 702  QMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCA 761
            QMTL TFH+AGV++ N+T GVPR+ EIIN +K I TP +S  L+     T   A+ V+  
Sbjct: 1137 QMTLKTFHFAGVASMNITQGVPRINEIINASKNISTPVISAELENPLELTS--ARWVKGR 1196

Query: 762  LEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLL------ 821
            +E TTL  V ++ EV       S  I  D   +         E A   I+PW +      
Sbjct: 1197 IEKTTLGQVAESIEVLMTSTSASVRIILDNKII---------EEACLSITPWSVKNSILK 1256

Query: 822  --RIELNRE--MMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPK 881
              RI+LN     ++D  L +  + +K            FN  N + ++  I I+N     
Sbjct: 1257 TPRIKLNDNDIRVLDTGLDITPVVDKSRAH--------FNLHNLKNVLPNI-IVNG---- 1316

Query: 882  GELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWML 941
                         +K +E  ++ E       D++K+  K              P   W  
Sbjct: 1317 -------------IKTVERVVVAE-------DMDKMLAKL-----------IIPCPRWAC 1368

Query: 942  DTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYR 1001
                 NLLAVM    ++ R TTSN+++EV + LGIEA R +++DE+  V+   G  ++ R
Sbjct: 1377 ----TNLLAVMGTPGINGRTTTSNNVVEVSKTLGIEAARTTIIDEIGTVMGNHGMSIDIR 1368

Query: 1002 HLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTE 1044
            H+ +L D MTYRG ++ I R GI + D   +M+ SFE T D L  AA   + D++ GVTE
Sbjct: 1437 HMMLLADVMTYRGEVLGIQRTGIQKMDKSVLMQASFERTGDHLFSAAASGKVDNIEGVTE 1368

[Close]

BLAST of Pay0001983 vs. TAIR 10
Match: AT3G57660.1 (nuclear RNA polymerase A1 )

HSP 1 Score: 259.2 bits (661), Expect = 1.9e-68
Identity = 287/1147 (25.02%), Postives = 461/1147 (40.19%), Query Frame = 0


Query: 99   NGLSTLATQRSGRPIKSIILVSEYFIIVRCRKITKRDTFITKDVFMNIL-------MWWE 158
            N  +  A   +G P+++  L+ ++  IV    +TKRDTF+ KD F  +L       M   
Sbjct: 627  NANNQYARPSNGEPLRA--LIQDH--IVSSVLLTKRDTFLDKDHFNQLLFSSGVTDMVLS 686

Query: 159  DFDGK---------------IPAPAILKPQPLWTGKQVFNLIIPK--------------- 218
             F G+                  PAILKP PLWTGKQV   ++ +               
Sbjct: 687  TFSGRSGKKVMVSASDAELLTVTPAILKPVPLWTGKQVITAVLNQITKGHPPFTVEKATK 746

Query: 219  -QINLTRTSAWHSESETGHVTP------------GDTFVRIEKGELLSGTLCKKALGTST 278
              ++  +  +   +  +G +T              +  + I K E + G + K     + 
Sbjct: 747  LPVDFFKCRSREVKPNSGDLTKKKEIDESWKQNLNEDKLHIRKNEFVCGVIDKAQF--AD 806

Query: 279  GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAA 338
              L+H + E  G +AA   L     L   +L  + F+ G+ D I      E+  + +   
Sbjct: 807  YGLVHTVHELYGSNAAGNLLSVFSRLFTVFLQTHGFTCGVDDLIILKDMDEERTKQLQEC 866

Query: 339  KNEVKNLIKKA----QERSLEPEPGRTMMD----------------SFENKVNQVLNK-A 398
            +N  + +++K      +  ++P+  R+ ++                S  N +NQ  +K  
Sbjct: 867  ENVGERVLRKTFGIDVDVQIDPQDMRSRIERILYEDGESALASLDRSIVNYLNQCSSKGV 926

Query: 399  RDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLP 458
             +D  S         N +  M  +G+KGS +N  Q+++ +GQQ++EGKR+P     +TLP
Sbjct: 927  MNDLLSDGLLKTPGRNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLP 986

Query: 459  HFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAM 518
             F   D+ P + GF+ + +L GL PQE++FH M GREGL+DTAVKTS +GY+QR L+K +
Sbjct: 987  CFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNL 1046

Query: 519  EDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDEN 578
            E + V YD TVR++ G +IQF YGEDG+D                      F  +F++  
Sbjct: 1047 ESLKVNYDCTVRDADGSIIQFQYGEDGVDV-----------------HRSSFIEKFKELT 1106

Query: 579  WKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSW--PMPVNLKR 638
               + +L +  ED+                              +G +S+   +P++LK+
Sbjct: 1107 INQDMVLQKCSEDM-----------------------------LSGASSYISDLPISLKK 1166

Query: 639  LIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILL 698
                A+K                 VEA+  + ER+                         
Sbjct: 1167 ---GAEK----------------FVEAM-PMNERI------------------------- 1226

Query: 699  RSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLN 758
                ASK V  E  L           ++S+F  SL  PGE +G +AAQS+GEP+TQMTLN
Sbjct: 1227 ----ASKFVRQEELLKL---------VKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLN 1286

Query: 759  TFHYAGVSAKNVTLGVPRLREII-NVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYT 818
            TFH AG    NVTLG+PRL+EI+   A  IKTP ++  L     KTKE A  +   L   
Sbjct: 1287 TFHLAGRGEMNVTLGIPRLQEILMTAAANIKTPIMTCPLL--KGKTKEDANDITDRLRKI 1346

Query: 819  TLRSVTQATEV---------------------WYDPD--PMST-IIEEDIDFVKSYYEMP 878
            T+  + ++ E+                      Y P+  P  T I EED +       + 
Sbjct: 1347 TVADIIKSMELSVVPYTVYENEVCSIHKLKINLYKPEHYPKHTDITEEDWEETMRAVFLR 1406

Query: 879  DEEIAPEKISPWLLRI--------------ELNREMMVDKKLS---------------MA 938
              E A E     L RI              E + +  V  K +               + 
Sbjct: 1407 KLEDAIETHMKMLHRIRGIHNDVTGPIAGNETDNDDSVSGKQNEDDGDDDGEGTEVDDLG 1466

Query: 939  NIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNM 998
            + A+K   +  D++    N ++       I  + D     E  D     +   +  E +M
Sbjct: 1467 SDAQKQKKQETDEMDYEENSEDETNEPSSISGVEDPEMDSENEDTEVSKEDTPEPQEESM 1526

Query: 999  LTEMALRGIPDINK-----------------VFIKCGKVNKFD----------------- 1044
              +  ++G+ ++ +                 +F+K G+  KF+                 
Sbjct: 1527 EPQKEVKGVKNVKEQSKKKRRKFVRAKSDRHIFVK-GEGEKFEVHFKFATDDPHILLAQI 1586

[Close]

BLAST of Pay0001983 vs. TAIR 10
Match: AT4G18670.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 54.3 bits (129), Expect = 9.4e-07
Identity = 134/315 (42.54%), Postives = 161/315 (51.11%), Query Frame = 0


Query: 1122 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 1181
            T SPG SP SP  SPS P   P+ P  +  SPG SP SP   P+ P+ +P SPG  PTSP
Sbjct: 416  TPSPGGSPPSPSISPSPPITVPSPP--TTPSPGGSPPSPSIVPSPPSTTP-SPGSPPTSP 475

Query: 1182 AYSPT---SPSYSPTSPS--YSPTSPSYSPT---SPSYSPTSPS--YSPTSPSYSPTSPA 1241
              +PT   SP  SPT+P+   SP S   +PT   SP  SPT+PS   SP SPS SP+ P 
Sbjct: 476  T-TPTPGGSPPSSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPSPGGSPPSPSISPSPPI 535

Query: 1242 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1301
              P SP  +PTSP   P+  S +P+SP  SP +PS  PT  S    SP   P+ P   P+
Sbjct: 536  TVP-SPPSTPTSPGSPPSPSSPTPSSPIPSPPTPSTPPTPISPGQNSPPIIPSPPFTGPS 595

Query: 1302 SPAY-SPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSP--RLSPSSP 1361
             P+  SP  P   P+ P   PT  S  P++P+  P  +   PS  Y P  P    SP SP
Sbjct: 596  PPSSPSPPLPPVIPSPPIVGPTPSSPPPSTPT--PVYSPPPPSTGYPPPPPFTGYSPPSP 655

Query: 1362 YSPTSPNYSPTSPSYSPTSP-AYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPT 1421
              P  P +SP SPS  P  P  YSP  P   P  P  T   P  SPS P  SP  G  P 
Sbjct: 656  PPPPPPTFSP-SPSIPPPPPQTYSPFPP--PPPPPPQTYYPPQPSPSQPPQSPIYGTPPP 715

The following BLAST results are available for this feature:

BLAST of Pay0001983 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P18616	0.0e+00	86.25	DNA-directed RNA polymerase II subunit RPB1 OS=Arabidopsis thaliana OX=3702 GN=N...	[more]
P11414	0.0e+00	58.70	DNA-directed RNA polymerase II subunit RPB1 OS=Cricetulus griseus OX=10029 GN=PO...	[more]
P08775	0.0e+00	58.70	DNA-directed RNA polymerase II subunit RPB1 OS=Mus musculus OX=10090 GN=Polr2a P...	[more]
P24928	0.0e+00	58.63	DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens OX=9606 GN=POLR2A PE...	[more]
P35084	0.0e+00	62.97	DNA-directed RNA polymerase II subunit rpb1 OS=Dictyostelium discoideum OX=44689...	[more]

BLAST of Pay0001983 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UGR7	0.0e+00	98.50	DNA-directed RNA polymerase subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5D3CJC8	0.0e+00	98.50	DNA-directed RNA polymerase subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A0A0L655	0.0e+00	97.18	DNA-directed RNA polymerase subunit OS=Cucumis sativus OX=3659 GN=Csa_3G002510 P...	[more]
A0A6J1ELE9	0.0e+00	97.23	DNA-directed RNA polymerase subunit OS=Cucurbita moschata OX=3662 GN=LOC11143524...	[more]
A0A6J1CV04	0.0e+00	97.15	DNA-directed RNA polymerase subunit OS=Momordica charantia OX=3673 GN=LOC1110148...	[more]

BLAST of Pay0001983 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11392.1	0.0e+00	98.50	DNA-directed RNA polymerase II subunit 1 [Cucumis melo var. makuwa]	[more]
KAA0052935.1	0.0e+00	98.50	DNA-directed RNA polymerase II subunit 1 [Cucumis melo var. makuwa]	[more]
XP_004146161.3	0.0e+00	98.20	DNA-directed RNA polymerase II subunit 1 [Cucumis sativus] >XP_011650276.2 DNA-d...	[more]
XP_038904743.1	0.0e+00	97.83	DNA-directed RNA polymerase II subunit RPB1 [Benincasa hispida]	[more]
XP_022928584.1	0.0e+00	97.23	DNA-directed RNA polymerase II subunit 1 [Cucurbita moschata] >XP_022928634.1 DN...	[more]

BLAST of Pay0001983 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35800.1	0.0e+00	86.25	RNA polymerase II large subunit	[more]
AT5G60040.1	1.2e-110	30.96	nuclear RNA polymerase C1	[more]
AT5G60040.2	6.3e-104	30.52	nuclear RNA polymerase C1	[more]
AT3G57660.1	1.9e-68	25.02	nuclear RNA polymerase A1	[more]
AT4G18670.1	9.4e-07	42.54	Leucine-rich repeat (LRR) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 278..305
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 1153..1174 score: 35.45 coord: 1191..1208 score: 30.0 coord: 1174..1190 score: 35.29 coord: 1209..1234 score: 33.08 coord: 1124..1140 score: 29.41
None	No IPR available	GENE3D	6.10.250.2940		coord: 389..447 e-value: 5.6E-34 score: 117.4
None	No IPR available	GENE3D	1.10.150.390		coord: 1001..1044 e-value: 2.0E-21 score: 77.6
None	No IPR available	GENE3D	6.20.50.80		coord: 448..498 e-value: 3.4E-15 score: 57.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1122..1343
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1424..1438
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1122..1438
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1356..1423
None	No IPR available	PANTHER	PTHR19376	DNA-DIRECTED RNA POLYMERASE	coord: 127..1115
None	No IPR available	PANTHER	PTHR19376:SF56	DNA-DIRECTED RNA POLYMERASE SUBUNIT	coord: 127..1115
None	No IPR available	CDD	cd02584	RNAP_II_Rpb1_C	coord: 638..1050 e-value: 0.0 score: 783.316
None	No IPR available	SUPERFAMILY	64484	beta and beta-prime subunits of DNA dependent RNA-polymerase	coord: 73..1053
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PFAM	PF05001	RNA_pol_Rpb1_R	coord: 1364..1377 e-value: 0.14 score: 12.5 coord: 1261..1274 e-value: 0.36 score: 11.3 coord: 1247..1260 e-value: 0.38 score: 11.2 coord: 1120..1134 e-value: 0.77 score: 10.2 coord: 1135..1148 e-value: 0.097 score: 13.1 coord: 1205..1218 e-value: 0.41 score: 11.1 coord: 1177..1190 e-value: 0.028 score: 14.8 coord: 1289..1302 e-value: 0.0022 score: 18.3 coord: 1350..1363 e-value: 0.13 score: 12.7 coord: 1233..1246 e-value: 0.006 score: 16.9 coord: 1219..1232 e-value: 0.084 score: 13.3 coord: 1191..1204 e-value: 0.39 score: 11.2 coord: 1317..1330 e-value: 1.0 score: 9.8 coord: 1275..1288 e-value: 0.34 score: 11.4 coord: 1149..1162 e-value: 0.0023 score: 18.2 coord: 1303..1316 e-value: 0.34 score: 11.4
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1260..1266
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1267..1273
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1349..1355
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1274..1280
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1309..1315
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1197..1203
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1204..1210
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1211..1217
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1190..1196
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1302..1308
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1370..1376
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1288..1294
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1356..1362
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1363..1369
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1253..1259
IPR007081	RNA polymerase Rpb1, domain 5	PFAM	PF04998	RNA_pol_Rpb1_5	coord: 409..999 e-value: 2.9E-105 score: 352.0
IPR007083	RNA polymerase Rpb1, domain 4	PFAM	PF05000	RNA_pol_Rpb1_4	coord: 298..402 e-value: 6.3E-39 score: 132.2
IPR007073	RNA polymerase Rpb1, domain 7	PFAM	PF04990	RNA_pol_Rpb1_7	coord: 744..878 e-value: 2.3E-53 score: 179.9
IPR007066	RNA polymerase Rpb1, domain 3	PFAM	PF04983	RNA_pol_Rpb1_3	coord: 124..271 e-value: 7.3E-37 score: 126.7
IPR038593	RNA polymerase Rpb1, domain 7 superfamily	GENE3D	3.30.1360.140		coord: 744..879 e-value: 1.6E-54 score: 185.5
IPR007075	RNA polymerase Rpb1, domain 6	PFAM	PF04992	RNA_pol_Rpb1_6	coord: 475..659 e-value: 4.9E-65 score: 218.9
IPR042102	RNA polymerase Rpb1, domain 3 superfamily	GENE3D	1.10.274.100	RNA polymerase Rpb1, domain 3	coord: 105..265 e-value: 1.1E-47 score: 163.4
IPR038120	RNA polymerase Rpb1, funnel domain superfamily	GENE3D	1.10.132.30		coord: 270..388 e-value: 2.5E-47 score: 161.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0001983.4	Pay0001983.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006366	transcription by RNA polymerase II
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005665	RNA polymerase II, core complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0001055	RNA polymerase II activity
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity