Pay0001905 (gene) Melon (Payzawat) v1

Overview


Name	Pay0001905
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Non-specific serine/threonine protein kinase
Location	chr07: 6168875 .. 6170693 (+)
RNA-Seq Expression	Pay0001905
Synteny	Pay0001905

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGATCTCCCTTGCTCTACAGAACCTCAATGTAAGCAAAAGATTATAGACATATATATATATAGGGTTTTTAATGTGTTAGTTTTATTGAATGGTTGATTGATAATTAAACAAGCTTTGTAATGAAATATTGTAGTTACTTCATTGTTCATTAATTGTGGAGGAGGAAGTATGGAGTTTAATGGTAGTATATATGAAGGGGATGATACTCAAGGTGGCAAAGCAAGTTTCTTTATCTCATCACAGAAATGGGGTTACGCTTCAACTGGTGTTTCTTTCCTGAGTGATAAACTTCCTTTCAAGCTATCATCTACCAGTAATTCCTCTTTTTCTTCTTCACCAACCCTTTATTCCACTGCTAGAGTTTCCCCTCTTTCTCTCAACTACTATGGATTTTGTCTCATCAGTGGAAGTTACTATGACAAGCTTCACTTTACTGAAATTTTGTTTACTGCTGACCAAACTTATGCCAGCCTCAGGAGGCGTATTTTCGATATCTCAATTCAAGTGAGTACTATACTAGTCGAACAGTTTTTCACCTAAAATATCTCGTACCAGTGCGAATAATTGTCATGATATTTGGGTTTGTAATTCCACAGGGAAAGTTGATTAAGGAGTTTACTTTAGAAGAAGCTGGAGGTGTTGGTAAAGAGTTTACTTTAGAAGTACCTGTGTTATGGTCAATAATGGAAGTAGTACTCTTCAGATTCATTTGTATTGAGCTGGTAAAGGAACAATTTACATTCCATACTCAGGGGTGCATGGACCTCTAATATCTGCAATCACTGTCACACCAAGTAAATATATTTTCTATGGTTAATAACGATTTCGTATTTCATTTTTCTGCTTTTGAAATCTATATTTGTTTTTTAAAATTTTTCTATTATGGTTTTCAGCTTTGTTAAAGATACATTTGAGTTCCTAGTTCAAATTCTAAAAACAAAGAAACCGACTTTTCACCCCATAAGATTCTTTGTGTACATATTAGTTTCTTTATGATGTTTTCAAAAACCAAGCTGAAAACTAAGTAGAAATAAAGTAATTCAACAAAGGTTTTAAAGCAGAAAACAAATTATTATCAAACGAGGACTTAGTTGTTTGTTTTGAGATTTTTACACCTTTTGTGATCTTCTATCTGAAACTGAATCATTTGGTTGTTATCTTCTGCTATTGTTGTAGACTTCCATGTCAAAACTAATGTGCAAACTAGAAGGCTACCGGCTGGAGCTATTGCTGGCAGGGTTGTTGTTGGTATTTTCATCTTTGTCGTCCTAGTTCTTGTGCTTCGACGGAAAGGTTATTTAGGTGGAAGGGAAACTGAAGACGACGGTAAGAGTACAATAATTTGAAAGAACAATAATATACATAAAACGTCGCGAACTAATTAAATAGCCATCAATCTCAAACCTTATTTTATCCCACTGGACCTATTTGCTGGACTTCATCATTAACAACCGCTTTGTTTATAGCTTTATTTCCCTTTCTTTAGACTAAATAAAAGTGCAAATTCATTACACAAAACTTCGAGACTTGAAATTATAGACAAGTTATTTCAGTTTAAGACAAATCAAAGCAGCCACCAACAACTTTGACTCTGCAAATAAAATTGGGGAGAGAAGCATTGGTTCTGTCTACAAGGTAAATATATCCATGCAAATTTTAGGATGTTAGCTCTAAGATTTAGAGAAGTGTGATTCTGGATGACATTGTTATGCAAATCTTCGTGTAGATTCTCTATCGTTAAAGGAGTACTATCAGATGGAACTTCCATTGCTGTAAAACAACTATCTTCTAAATCAAGACAAGGGAATCGTGA

mRNA sequence

ATGAAGGATCTCCCTTGCTCTACAGAACCTCAATTTACTTCATTGTTCATTAATTGTGGAGGAGGAAGTATGGAGTTTAATGGTAGTATATATGAAGGGGATGATACTCAAGGTGGCAAAGCAAGTTTCTTTATCTCATCACAGAAATGGGGTTACGCTTCAACTGGTGTTTCTTTCCTGAGTGATAAACTTCCTTTCAAGCTATCATCTACCATGGAAGTTACTATGACAAGCTTCACTTTACTGAAATTTTGTTTACTGCTGACCAAACTTATGCCAGCCTCAGGAGGCGTATTTTCGATATCTCAATTCAAGGAATCGTGA

Coding sequence (CDS)

ATGAAGGATCTCCCTTGCTCTACAGAACCTCAATTTACTTCATTGTTCATTAATTGTGGAGGAGGAAGTATGGAGTTTAATGGTAGTATATATGAAGGGGATGATACTCAAGGTGGCAAAGCAAGTTTCTTTATCTCATCACAGAAATGGGGTTACGCTTCAACTGGTGTTTCTTTCCTGAGTGATAAACTTCCTTTCAAGCTATCATCTACCATGGAAGTTACTATGACAAGCTTCACTTTACTGAAATTTTGTTTACTGCTGACCAAACTTATGCCAGCCTCAGGAGGCGTATTTTCGATATCTCAATTCAAGGAATCGTGA

Protein sequence

MKDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKASFFISSQKWGYASTGVSFLSDKLPFKLSSTMEVTMTSFTLLKFCLLLTKLMPASGGVFSISQFKES

Homology

[Close]

BLAST of Pay0001905 vs. ExPASy Swiss-Prot
Match: C0LGG9 (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana OX=3702 GN=At1g53440 PE=2 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 1.7e-06
Identity = 25/73 (34.25%), Postives = 41/73 (56.16%), Query Frame = 0


Query: 2   KDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKASFFISSQKWGYASTGVSFLS 61
           KDLPC  +   +SLFINCGG  ++ +   Y  D  + G ++F   S++WGY+S+G    +
Sbjct: 395 KDLPCPGDAHHSSLFINCGGNRLKVDKDEYADDLNKRGASTFSSVSERWGYSSSGAWLGN 454

Query: 62  DKLPFKLSSTMEV 75
           D   +  + T  +
Sbjct: 455 DGATYLATDTFNL 467

[Close]

BLAST of Pay0001905 vs. ExPASy Swiss-Prot
Match: C0LGG8 (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana OX=3702 GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 8.3e-06
Identity = 22/54 (40.74%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 4   LPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKASFFISSQKWGYASTGV 58
           LPC  + + +SLFINCGG  ++     Y  D    G+++F   S++WGY+S+GV
Sbjct: 399 LPCPEDAKQSSLFINCGGSRLKIGKDTYTDDLNSRGQSTFSSVSERWGYSSSGV 452

[Close]

BLAST of Pay0001905 vs. ExPASy TrEMBL
Match: A0A1S4E4B0 (probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Cucumis melo OX=3656 GN=LOC107992026 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 8.0e-52
Identity = 106/107 (99.07%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MKDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKASFFISSQKWGYASTGVSFL 60
           MKDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKASFFISSQKWGYASTGVSFL
Sbjct: 1   MKDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKASFFISSQKWGYASTGVSFL 60

Query: 61  SDKLPFKLSSTMEVTMTSFTLLKFCLLLTKLMPASGGVFSISQFKES 108
           SDKLPFKLSSTMEVTM+SFTLLKFCLLLTKLMPASGGVFSISQFKES
Sbjct: 61  SDKLPFKLSSTMEVTMSSFTLLKFCLLLTKLMPASGGVFSISQFKES 107

[Close]

BLAST of Pay0001905 vs. ExPASy TrEMBL
Match: A0A5D3DXB7 (Putative LRR receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00740 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.1e-32
Identity = 72/78 (92.31%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MKDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKASFFISSQKWGYASTGVSFL 60
          MKDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKASFFISSQKWGYASTGVSFL
Sbjct: 1  MKDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKASFFISSQKWGYASTGVSFL 60

Query: 61 SDKLPFKLSSTMEVTMTS 79
          SDKLPFKLSST   + +S
Sbjct: 61 SDKLPFKLSSTSNSSFSS 78

[Close]

BLAST of Pay0001905 vs. ExPASy TrEMBL
Match: A0A6J1J1M5 (Non-specific serine/threonine protein kinase OS=Cucurbita maxima OX=3661 GN=LOC111480454 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.5e-15
Identity = 43/73 (58.90%), Postives = 57/73 (78.08%), Query Frame = 0


Query: 1   MKDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKAS--FFISSQKWGYASTGVS 60
           MKDLPC TE +F SLFINCGG SME NGS Y+ DDTQGG +S  FF S+++WGY+STG+ 
Sbjct: 401 MKDLPCPTENRFHSLFINCGGRSMELNGSEYKADDTQGGSSSARFFSSAERWGYSSTGLY 460

Query: 61  FLSDKLPFKLSST 72
             ++ LP+ +S++
Sbjct: 461 LRNEHLPYIVSTS 473

[Close]

BLAST of Pay0001905 vs. ExPASy TrEMBL
Match: A0A6J1FLH5 (Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111446321 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.5e-15
Identity = 43/73 (58.90%), Postives = 57/73 (78.08%), Query Frame = 0


Query: 1   MKDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKAS--FFISSQKWGYASTGVS 60
           MKDLPC TE +F SLFINCGG SME NGS Y+ DDTQGG +S  FF S+++WGY+STG+ 
Sbjct: 438 MKDLPCPTENRFHSLFINCGGRSMELNGSEYKADDTQGGSSSARFFSSAERWGYSSTGLY 497

Query: 61  FLSDKLPFKLSST 72
             ++ LP+ +S++
Sbjct: 498 LRNEHLPYIVSTS 510

[Close]

BLAST of Pay0001905 vs. ExPASy TrEMBL
Match: A0A6J1C483 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111008221 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.5e-13
Identity = 48/99 (48.48%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 2   KDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQG--GKASFFISSQKWGYASTGVSF 61
           KD PC  E +F SLFINCGG SME NG+ YE DDT G  G+++FF SS++WGY+STGV  
Sbjct: 408 KDFPCLKEARFHSLFINCGGESMEVNGNEYEVDDTHGQNGRSNFFSSSERWGYSSTGVFL 467

Query: 62  LSDKLPF------------KLSSTMEVTMTSFTLLKFCL 87
            +D+LP+             L ST  V+  S     FCL
Sbjct: 468 RNDRLPYIVTSSSHGSGASGLYSTARVSPLSLKYYGFCL 506

[Close]

BLAST of Pay0001905 vs. NCBI nr
Match: XP_016903068.1 (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Cucumis melo])

HSP 1 Score: 212.6 bits (540), Expect = 1.6e-51
Identity = 106/107 (99.07%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MKDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKASFFISSQKWGYASTGVSFL 60
           MKDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKASFFISSQKWGYASTGVSFL
Sbjct: 1   MKDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKASFFISSQKWGYASTGVSFL 60

Query: 61  SDKLPFKLSSTMEVTMTSFTLLKFCLLLTKLMPASGGVFSISQFKES 108
           SDKLPFKLSSTMEVTM+SFTLLKFCLLLTKLMPASGGVFSISQFKES
Sbjct: 61  SDKLPFKLSSTMEVTMSSFTLLKFCLLLTKLMPASGGVFSISQFKES 107

[Close]

BLAST of Pay0001905 vs. NCBI nr
Match: KAA0066742.1 (putative LRR receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa] >TYK27890.1 putative LRR receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 149.1 bits (375), Expect = 2.2e-32
Identity = 72/78 (92.31%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MKDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKASFFISSQKWGYASTGVSFL 60
          MKDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKASFFISSQKWGYASTGVSFL
Sbjct: 1  MKDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKASFFISSQKWGYASTGVSFL 60

Query: 61 SDKLPFKLSSTMEVTMTS 79
          SDKLPFKLSST   + +S
Sbjct: 61 SDKLPFKLSSTSNSSFSS 78

[Close]

BLAST of Pay0001905 vs. NCBI nr
Match: XP_023525944.1 (probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 90.9 bits (224), Expect = 7.2e-15
Identity = 43/73 (58.90%), Postives = 57/73 (78.08%), Query Frame = 0


Query: 1   MKDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKAS--FFISSQKWGYASTGVS 60
           MKDLPC TE +F SLFINCGG SME NGS Y+ DDTQGG +S  FF S+++WGY+STG+ 
Sbjct: 405 MKDLPCPTENRFHSLFINCGGRSMELNGSEYKADDTQGGSSSARFFSSAERWGYSSTGLY 464

Query: 61  FLSDKLPFKLSST 72
             ++ LP+ +S++
Sbjct: 465 LRNEHLPYIVSTS 477

[Close]

BLAST of Pay0001905 vs. NCBI nr
Match: XP_022940854.1 (probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Cucurbita moschata])

HSP 1 Score: 90.9 bits (224), Expect = 7.2e-15
Identity = 43/73 (58.90%), Postives = 57/73 (78.08%), Query Frame = 0


Query: 1   MKDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKAS--FFISSQKWGYASTGVS 60
           MKDLPC TE +F SLFINCGG SME NGS Y+ DDTQGG +S  FF S+++WGY+STG+ 
Sbjct: 438 MKDLPCPTENRFHSLFINCGGRSMELNGSEYKADDTQGGSSSARFFSSAERWGYSSTGLY 497

Query: 61  FLSDKLPFKLSST 72
             ++ LP+ +S++
Sbjct: 498 LRNEHLPYIVSTS 510

[Close]

BLAST of Pay0001905 vs. NCBI nr
Match: XP_022981268.1 (probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Cucurbita maxima])

HSP 1 Score: 90.9 bits (224), Expect = 7.2e-15
Identity = 43/73 (58.90%), Postives = 57/73 (78.08%), Query Frame = 0


Query: 1   MKDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKAS--FFISSQKWGYASTGVS 60
           MKDLPC TE +F SLFINCGG SME NGS Y+ DDTQGG +S  FF S+++WGY+STG+ 
Sbjct: 401 MKDLPCPTENRFHSLFINCGGRSMELNGSEYKADDTQGGSSSARFFSSAERWGYSSTGLY 460

Query: 61  FLSDKLPFKLSST 72
             ++ LP+ +S++
Sbjct: 461 LRNEHLPYIVSTS 473

[Close]

BLAST of Pay0001905 vs. TAIR 10
Match: AT1G53440.1 (Leucine-rich repeat transmembrane protein kinase )

HSP 1 Score: 53.5 bits (127), Expect = 1.2e-07
Identity = 25/73 (34.25%), Postives = 41/73 (56.16%), Query Frame = 0


Query: 2   KDLPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKASFFISSQKWGYASTGVSFLS 61
           KDLPC  +   +SLFINCGG  ++ +   Y  D  + G ++F   S++WGY+S+G    +
Sbjct: 395 KDLPCPGDAHHSSLFINCGGNRLKVDKDEYADDLNKRGASTFSSVSERWGYSSSGAWLGN 454

Query: 62  DKLPFKLSSTMEV 75
           D   +  + T  +
Sbjct: 455 DGATYLATDTFNL 467

[Close]

BLAST of Pay0001905 vs. TAIR 10
Match: AT1G53430.1 (Leucine-rich repeat transmembrane protein kinase )

HSP 1 Score: 51.2 bits (121), Expect = 5.9e-07
Identity = 22/54 (40.74%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 4   LPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKASFFISSQKWGYASTGV 58
           LPC  + + +SLFINCGG  ++     Y  D    G+++F   S++WGY+S+GV
Sbjct: 391 LPCPEDAKQSSLFINCGGSRLKIGKDTYTDDLNSRGQSTFSSVSERWGYSSSGV 444

[Close]

BLAST of Pay0001905 vs. TAIR 10
Match: AT1G53430.2 (Leucine-rich repeat transmembrane protein kinase )

HSP 1 Score: 51.2 bits (121), Expect = 5.9e-07
Identity = 22/54 (40.74%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 4   LPCSTEPQFTSLFINCGGGSMEFNGSIYEGDDTQGGKASFFISSQKWGYASTGV 58
           LPC  + + +SLFINCGG  ++     Y  D    G+++F   S++WGY+S+GV
Sbjct: 358 LPCPEDAKQSSLFINCGGSRLKIGKDTYTDDLNSRGQSTFSSVSERWGYSSSGV 411

The following BLAST results are available for this feature:

BLAST of Pay0001905 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C0LGG9	1.7e-06	34.25	Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidop...	[more]
C0LGG8	8.3e-06	40.74	Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidop...	[more]

BLAST of Pay0001905 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E4B0	8.0e-52	99.07	probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Cucumis ...	[more]
A0A5D3DXB7	1.1e-32	92.31	Putative LRR receptor-like serine/threonine-protein kinase OS=Cucumis melo var. ...	[more]
A0A6J1J1M5	3.5e-15	58.90	Non-specific serine/threonine protein kinase OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1FLH5	3.5e-15	58.90	Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1C483	2.5e-13	48.48	Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of Pay0001905 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903068.1	1.6e-51	99.07	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 ...	[more]
KAA0066742.1	2.2e-32	92.31	putative LRR receptor-like serine/threonine-protein kinase [Cucumis melo var. ma...	[more]
XP_023525944.1	7.2e-15	58.90	probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Cucurbita ...	[more]
XP_022940854.1	7.2e-15	58.90	probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Cucurbita ...	[more]
XP_022981268.1	7.2e-15	58.90	probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Cucurbita ...	[more]

BLAST of Pay0001905 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53440.1	1.2e-07	34.25	Leucine-rich repeat transmembrane protein kinase	[more]
AT1G53430.1	5.9e-07	40.74	Leucine-rich repeat transmembrane protein kinase	[more]
AT1G53430.2	5.9e-07	40.74	Leucine-rich repeat transmembrane protein kinase	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR27006	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	coord: 2..66
None	No IPR available	PANTHER	PTHR27006:SF330	SUBFAMILY NOT NAMED	coord: 2..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0001905.1	Pay0001905.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity