Pay0001713 (gene) Melon (Payzawat) v1

Overview


Name	Pay0001713
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Integrase
Location	chr09: 894068 .. 894583 (-)
RNA-Seq Expression	Pay0001713
Synteny	Pay0001713

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATACTTCATCTTGCAACACTCCCATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTGTATCGAAGCTTAATTGGAAGCTTAATGTACGTGACAGCAACAAGACCTAATATTTTATTTGCTGTAAGTATGTTAAGCAGATTTATGACAAACCCAAAAAGAAGTCATTGGGAAGCAGGCAAAAGAGTTCTTCGTTACATTATTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGTTGTTTGGTTTTTGTGATAGTGACAAGGGTGGTAATGTGGATGATCATAAAAGTACATCTGGTTATGTTTTTAGTATGGGTTCAGGTGTTTTTTCATGGACTTCAAAGAAACAATCTGTTGTTGCCCTTTCTACAACCGAAGCAGAATATATCTCGTTACCTGCAGCTGGATGTCAAGCTTTATGGCTTTGGTGGATGTTAAAAGAATTGAAGTGCATGTACTCAAAAATGTGA

mRNA sequence

ATGGAAAATACTTCATCTTGCAACACTCCCATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTGTATCGAAGCTTAATTGGAAGCTTAATGTACGTGACAGCAACAAGACCTAATATTTTATTTGCTGTAAGTATGTTAAGCAGATTTATGACAAACCCAAAAAGAAGTCATTGGGAAGCAGGCAAAAGAGTTCTTCGTTACATTATTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGTTGTTTGGTTTTTGTGATAGTGACAAGGGTGGTAATGTGGATGATCATAAAAGTACATCTGGTTATGTTTTTAGTATGGGTTCAGGTGTTTTTTCATGGACTTCAAAGAAACAATCTGTTGTTGCCCTTTCTACAACCGAAGCAGAATATATCTCGTTACCTGCAGCTGGATGTCAAGCTTTATGGCTTTGGTGGATGTTAAAAGAATTGAAGTGCATGTACTCAAAAATGTGA

Coding sequence (CDS)

ATGGAAAATACTTCATCTTGCAACACTCCCATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTGTATCGAAGCTTAATTGGAAGCTTAATGTACGTGACAGCAACAAGACCTAATATTTTATTTGCTGTAAGTATGTTAAGCAGATTTATGACAAACCCAAAAAGAAGTCATTGGGAAGCAGGCAAAAGAGTTCTTCGTTACATTATTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGTTGTTTGGTTTTTGTGATAGTGACAAGGGTGGTAATGTGGATGATCATAAAAGTACATCTGGTTATGTTTTTAGTATGGGTTCAGGTGTTTTTTCATGGACTTCAAAGAAACAATCTGTTGTTGCCCTTTCTACAACCGAAGCAGAATATATCTCGTTACCTGCAGCTGGATGTCAAGCTTTATGGCTTTGGTGGATGTTAAAAGAATTGAAGTGCATGTACTCAAAAATGTGA

Protein sequence

MENTSSCNTPMDANLKLCKDDIGEAVDPSLYRSLIGSLMYVTATRPNILFAVSMLSRFMTNPKRSHWEAGKRVLRYIIGTINFGIYYKKVSESVLFGFCDSDKGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLPAAGCQALWLWWMLKELKCMYSKM

Homology

[Close]

BLAST of Pay0001713 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.9e-28
Identity = 72/171 (42.11%), Postives = 103/171 (60.23%), Query Frame = 0


Query: 1    MENTSSCNTPMDANLKLCKDDIGEAVDPS------LYRSLIGSLMY-VTATRPNILFAVS 60
            M+N    +TP+  +LKL K      V+         Y S +GSLMY +  TRP+I  AV 
Sbjct: 1075 MKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVG 1134

Query: 61   MLSRFMTNPKRSHWEAGKRVLRYIIGTINFGIYYKKVSESVLFGFCDSDKGGNVDDHKST 120
            ++SRF+ NP + HWEA K +LRY+ GT    + +   S+ +L G+ D+D  G++D+ KS+
Sbjct: 1135 VVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG-SDPILKGYTDADMAGDIDNRKSS 1194

Query: 121  SGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLPAAGCQALWLWWMLKEL 165
            +GY+F+   G  SW SK Q  VALSTTEAEYI+    G + +WL   L+EL
Sbjct: 1195 TGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQEL 1244

[Close]

BLAST of Pay0001713 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 7.3e-28
Identity = 66/156 (42.31%), Postives = 95/156 (60.90%), Query Frame = 0


Query: 9    TPMDANLKLCKDDIGEAVDPSLYRSLIGSLMYVTATRPNILFAVSMLSRFMTNPKRSHWE 68
            TPM  + KL      +  DP+ YR ++GSL Y+  TRP++ +AV+ LS++M  P   HW 
Sbjct: 1206 TPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWN 1265

Query: 69   AGKRVLRYIIGTINFGIYYKKVSESVLFGFCDSDKGGNVDDHKSTSGYVFSMGSGVFSWT 128
            A KRVLRY+ GT + GI+ KK +   L  + D+D  G+ DD+ ST+GY+  +G    SW+
Sbjct: 1266 ALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWS 1325

Query: 129  SKKQSVVALSTTEAEYISLPAAGCQALWLWWMLKEL 165
            SKKQ  V  S+TEAEY S+     +  W+  +L EL
Sbjct: 1326 SKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTEL 1361

[Close]

BLAST of Pay0001713 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.6e-27
Identity = 67/156 (42.95%), Postives = 95/156 (60.90%), Query Frame = 0


Query: 9    TPMDANLKLCKDDIGEAVDPSLYRSLIGSLMYVTATRPNILFAVSMLSRFMTNPKRSHWE 68
            TPM  + KL      +  DP+ YR ++GSL Y+  TRP+I +AV+ LS+FM  P   H +
Sbjct: 1223 TPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQ 1282

Query: 69   AGKRVLRYIIGTINFGIYYKKVSESVLFGFCDSDKGGNVDDHKSTSGYVFSMGSGVFSWT 128
            A KR+LRY+ GT N GI+ KK +   L  + D+D  G+ DD+ ST+GY+  +G    SW+
Sbjct: 1283 ALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWS 1342

Query: 129  SKKQSVVALSTTEAEYISLPAAGCQALWLWWMLKEL 165
            SKKQ  V  S+TEAEY S+     +  W+  +L EL
Sbjct: 1343 SKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTEL 1378

[Close]

BLAST of Pay0001713 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-25
Identity = 57/128 (44.53%), Postives = 87/128 (67.97%), Query Frame = 0


Query: 31  YRSLIGSLMY-VTATRPNILFAVSMLSRFMTNPKRSHWEAGKRVLRYIIGTINFGIYYKK 90
           Y S +G++MY +  TRP++  AV +LS+F ++P  +HW+A KRVLRY+  T  +G+ + +
Sbjct: 6   YLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEFTR 65

Query: 91  VSESVLFGFCDSDKGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLPA 150
              + L G+ D+D  G+V+  +STSGY+F +  G  SW SKKQ  VALS+TE EY++L  
Sbjct: 66  AGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALSE 125

Query: 151 AGCQALWL 158
           A  +A+WL
Sbjct: 126 ATQEAVWL 133

[Close]

BLAST of Pay0001713 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 106.7 bits (265), Expect = 2.7e-22
Identity = 69/170 (40.59%), Postives = 105/170 (61.76%), Query Frame = 0


Query: 1    MENTSSCNTPMDA--NLKLCKDDIGEAVDPSLYRSLIGSLMYV-TATRPNILFAVSMLSR 60
            MEN ++ +TP+ +  N +L   D  +   P   RSLIG LMY+   TRP++  AV++LSR
Sbjct: 1152 MENCNAVSTPLPSKINYELLNSD-EDCNTPC--RSLIGCLMYIMLCTRPDLTTAVNILSR 1211

Query: 61   FMTNPKRSHWEAGKRVLRYIIGTINFGIYYKK--VSESVLFGFCDSDKGGNVDDHKSTSG 120
            + +      W+  KRVLRY+ GTI+  + +KK    E+ + G+ DSD  G+  D KST+G
Sbjct: 1212 YSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTG 1271

Query: 121  YVFSM-GSGVFSWTSKKQSVVALSTTEAEYISLPAAGCQALWLWWMLKEL 165
            Y+F M    +  W +K+Q+ VA S+TEAEY++L  A  +ALWL ++L  +
Sbjct: 1272 YLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSI 1318

[Close]

BLAST of Pay0001713 vs. ExPASy TrEMBL
Match: A0A5D3CLV1 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.4e-84
Identity = 156/167 (93.41%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1    MENTSSCNTPMDANLKLCKDDIGEAVDPSLYRSLIGSLMYVTATRPNILFAVSMLSRFMT 60
            MEN S CNTPMDANLKLCKDDIGEAVDPSLYRSL+GSLMY+TATRP+ILFAVSMLSRFMT
Sbjct: 1100 MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 1159

Query: 61   NPKRSHWEAGKRVLRYIIGTINFGIYYKKVSESVLFGFCDSDKGGNVDDHKSTSGYVFSM 120
            NPKRSHWEAGKRVLRYI+GTINFGIYYKKVSESV+FGFCDSD GGNVDDHKSTSGYVFSM
Sbjct: 1160 NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 1219

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLPAAGCQALWLWWMLKELKCM 168
            GSGVFSWTSKKQSVVALSTTEAEYISL AAGCQALWL WMLKELKC+
Sbjct: 1220 GSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCI 1266

[Close]

BLAST of Pay0001713 vs. ExPASy TrEMBL
Match: A0A5D3BQ81 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00890 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.4e-84
Identity = 156/167 (93.41%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1    MENTSSCNTPMDANLKLCKDDIGEAVDPSLYRSLIGSLMYVTATRPNILFAVSMLSRFMT 60
            MEN S CNTPMDANLKLCKDDIGEAVDPSLYRSL+GSLMY+TATRP+ILFAVSMLSRFMT
Sbjct: 1100 MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 1159

Query: 61   NPKRSHWEAGKRVLRYIIGTINFGIYYKKVSESVLFGFCDSDKGGNVDDHKSTSGYVFSM 120
            NPKRSHWEAGKRVLRYI+GTINFGIYYKKVSESV+FGFCDSD GGNVDDHKSTSGYVFSM
Sbjct: 1160 NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 1219

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLPAAGCQALWLWWMLKELKCM 168
            GSGVFSWTSKKQSVVALSTTEAEYISL AAGCQALWL WMLKELKC+
Sbjct: 1220 GSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCI 1266

[Close]

BLAST of Pay0001713 vs. ExPASy TrEMBL
Match: A0A5D3E3T2 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00030 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.4e-84
Identity = 156/167 (93.41%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1    MENTSSCNTPMDANLKLCKDDIGEAVDPSLYRSLIGSLMYVTATRPNILFAVSMLSRFMT 60
            MEN S CNTPMDANLKLCKDDIGEAVDPSLYRSL+GSLMY+TATRP+ILFAVSMLSRFMT
Sbjct: 1100 MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 1159

Query: 61   NPKRSHWEAGKRVLRYIIGTINFGIYYKKVSESVLFGFCDSDKGGNVDDHKSTSGYVFSM 120
            NPKRSHWEAGKRVLRYI+GTINFGIYYKKVSESV+FGFCDSD GGNVDDHKSTSGYVFSM
Sbjct: 1160 NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 1219

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLPAAGCQALWLWWMLKELKCM 168
            GSGVFSWTSKKQSVVALSTTEAEYISL AAGCQALWL WMLKELKC+
Sbjct: 1220 GSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCI 1266

[Close]

BLAST of Pay0001713 vs. ExPASy TrEMBL
Match: A0A5D3D538 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00090 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.4e-84
Identity = 156/167 (93.41%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MENTSSCNTPMDANLKLCKDDIGEAVDPSLYRSLIGSLMYVTATRPNILFAVSMLSRFMT 60
           MEN S CNTPMDANLKLCKDDIGEAVDPSLYRSL+GSLMY+TATRP+ILFAVSMLSRFMT
Sbjct: 45  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 104

Query: 61  NPKRSHWEAGKRVLRYIIGTINFGIYYKKVSESVLFGFCDSDKGGNVDDHKSTSGYVFSM 120
           NPKRSHWEAGKRVLRYI+GTINFGIYYKKVSESV+FGFCDSD GGNVDDHKSTSGYVFSM
Sbjct: 105 NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 164

Query: 121 GSGVFSWTSKKQSVVALSTTEAEYISLPAAGCQALWLWWMLKELKCM 168
           GSGVFSWTSKKQSVVALSTTEAEYISL AAGCQALWL WMLKELKC+
Sbjct: 165 GSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCI 211

[Close]

BLAST of Pay0001713 vs. ExPASy TrEMBL
Match: A0A5D3CXM6 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001540 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.4e-84
Identity = 156/167 (93.41%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1    MENTSSCNTPMDANLKLCKDDIGEAVDPSLYRSLIGSLMYVTATRPNILFAVSMLSRFMT 60
            MEN S CNTPMDANLKLCKDDIGEAVDPSLYRSL+GSLMY+TATRP+ILFAVSMLSRFMT
Sbjct: 1565 MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 1624

Query: 61   NPKRSHWEAGKRVLRYIIGTINFGIYYKKVSESVLFGFCDSDKGGNVDDHKSTSGYVFSM 120
            NPKRSHWEAGKRVLRYI+GTINFGIYYKKVSESV+FGFCDSD GGNVDDHKSTSGYVFSM
Sbjct: 1625 NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 1684

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLPAAGCQALWLWWMLKELKCM 168
            GSGVFSWTSKKQSVVALSTTEAEYISL AAGCQALWL WMLKELKC+
Sbjct: 1685 GSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCI 1731

[Close]

BLAST of Pay0001713 vs. NCBI nr
Match: TYJ95504.1 (integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. makuwa] >TYK12883.1 integrase [Cucumis melo var. makuwa] >TYK20599.1 integrase [Cucumis melo var. makuwa])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 156/167 (93.41%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1    MENTSSCNTPMDANLKLCKDDIGEAVDPSLYRSLIGSLMYVTATRPNILFAVSMLSRFMT 60
            MEN S CNTPMDANLKLCKDDIGEAVDPSLYRSL+GSLMY+TATRP+ILFAVSMLSRFMT
Sbjct: 1100 MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 1159

Query: 61   NPKRSHWEAGKRVLRYIIGTINFGIYYKKVSESVLFGFCDSDKGGNVDDHKSTSGYVFSM 120
            NPKRSHWEAGKRVLRYI+GTINFGIYYKKVSESV+FGFCDSD GGNVDDHKSTSGYVFSM
Sbjct: 1160 NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 1219

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLPAAGCQALWLWWMLKELKCM 168
            GSGVFSWTSKKQSVVALSTTEAEYISL AAGCQALWL WMLKELKC+
Sbjct: 1220 GSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCI 1266

[Close]

BLAST of Pay0001713 vs. NCBI nr
Match: KAA0060377.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 156/167 (93.41%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1    MENTSSCNTPMDANLKLCKDDIGEAVDPSLYRSLIGSLMYVTATRPNILFAVSMLSRFMT 60
            MEN S CNTPMDANLKLCKDDIGEAVDPSLYRSL+GSLMY+TATRP+ILFAVSMLSRFMT
Sbjct: 1100 MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 1159

Query: 61   NPKRSHWEAGKRVLRYIIGTINFGIYYKKVSESVLFGFCDSDKGGNVDDHKSTSGYVFSM 120
            NPKRSHWEAGKRVLRYI+GTINFGIYYKKVSESV+FGFCDSD GGNVDDHKSTSGYVFSM
Sbjct: 1160 NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 1219

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLPAAGCQALWLWWMLKELKCM 168
            GSGVFSWTSKKQSVVALSTTEAEYISL AAGCQALWL WMLKELKC+
Sbjct: 1220 GSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCI 1266

[Close]

BLAST of Pay0001713 vs. NCBI nr
Match: KAA0039947.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 156/167 (93.41%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1    MENTSSCNTPMDANLKLCKDDIGEAVDPSLYRSLIGSLMYVTATRPNILFAVSMLSRFMT 60
            MEN S CNTPMDANLKLCKDDIGEAVDPSLYRSL+GSLMY+TATRP+ILFAVSMLSRFMT
Sbjct: 1100 MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 1159

Query: 61   NPKRSHWEAGKRVLRYIIGTINFGIYYKKVSESVLFGFCDSDKGGNVDDHKSTSGYVFSM 120
            NPKRSHWEAGKRVLRYI+GTINFGIYYKKVSESV+FGFCDSD GGNVDDHKSTSGYVFSM
Sbjct: 1160 NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 1219

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLPAAGCQALWLWWMLKELKCM 168
            GSGVFSWTSKKQSVVALSTTEAEYISL AAGCQALWL WMLKELKC+
Sbjct: 1220 GSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCI 1266

[Close]

BLAST of Pay0001713 vs. NCBI nr
Match: KAA0038926.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 156/167 (93.41%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1    MENTSSCNTPMDANLKLCKDDIGEAVDPSLYRSLIGSLMYVTATRPNILFAVSMLSRFMT 60
            MEN S CNTPMDANLKLCKDDIGEAVDPSLYRSL+GSLMY+TATRP+ILFAVSMLSRFMT
Sbjct: 1100 MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 1159

Query: 61   NPKRSHWEAGKRVLRYIIGTINFGIYYKKVSESVLFGFCDSDKGGNVDDHKSTSGYVFSM 120
            NPKRSHWEAGKRVLRYI+GTINFGIYYKKVSESV+FGFCDSD GGNVDDHKSTSGYVFSM
Sbjct: 1160 NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 1219

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLPAAGCQALWLWWMLKELKCM 168
            GSGVFSWTSKKQSVVALSTTEAEYISL AAGCQALWL WMLKELKC+
Sbjct: 1220 GSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCI 1266

[Close]

BLAST of Pay0001713 vs. NCBI nr
Match: KAA0048003.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 156/167 (93.41%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1    MENTSSCNTPMDANLKLCKDDIGEAVDPSLYRSLIGSLMYVTATRPNILFAVSMLSRFMT 60
            MEN S CNTPMDANLKLCKDDIGEAVDPSLYRSL+GSLMY+TATRP+ILFAVSMLSRFMT
Sbjct: 885  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 944

Query: 61   NPKRSHWEAGKRVLRYIIGTINFGIYYKKVSESVLFGFCDSDKGGNVDDHKSTSGYVFSM 120
            NPKRSHWEAGKRVLRYI+GTINFGIYYKKVSESV+FGFCDSD GGNVDDHKSTSGYVFSM
Sbjct: 945  NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 1004

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLPAAGCQALWLWWMLKELKCM 168
            GSGVFSWTSKKQSVVALSTTEAEYISL AAGCQALWL WMLKELKC+
Sbjct: 1005 GSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCI 1051

[Close]

BLAST of Pay0001713 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 114.8 bits (286), Expect = 7.0e-26
Identity = 64/163 (39.26%), Postives = 94/163 (57.67%), Query Frame = 0


Query: 8   NTPMDANLKLCKDDIGEAVDPSLYRSLIGSLMYVTATRPNILFAVSMLSRFMTNPKRSHW 67
           + PMD ++       G+ VD   YR LIG LMY+  TR +I FAV+ LS+F   P+ +H 
Sbjct: 355 SVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQ 414

Query: 68  EAGKRVLRYIIGTINFGIYYKKVSESVLFGFCDSDKGGNVDDHKSTSGYVFSMGSGVFSW 127
           +A  ++L YI GT+  G++Y   +E  L  F D+      D  +ST+GY   +G+ + SW
Sbjct: 415 QAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISW 474

Query: 128 TSKKQSVVALSTTEAEYISLPAAGCQALWLWWMLKELKCMYSK 171
            SKKQ VV+ S+ EAEY +L  A  + +WL    +EL+   SK
Sbjct: 475 KSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSK 517

[Close]

BLAST of Pay0001713 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 3.2e-23
Identity = 52/130 (40.00%), Postives = 82/130 (63.08%), Query Frame = 0


Query: 27  DPSLYRSLIGSLMYVTATRPNILFAVSMLSRFMTNPKRSHWEAGKRVLRYIIGTINFGIY 86
           DPS +RS++G+L Y+T TRP+I +AV+++ + M  P  + ++  KRVLRY+ GTI  G+Y
Sbjct: 96  DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY 155

Query: 87  YKKVSESVLFGFCDSDKGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYIS 146
             K S+  +  FCDSD  G     +ST+G+   +G  + SW++K+Q  V+ S+TE EY +
Sbjct: 156 IHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRA 215

Query: 147 LPAAGCQALW 157
           L     +  W
Sbjct: 216 LALTAAELTW 225

[Close]

BLAST of Pay0001713 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09
Identity = 29/78 (37.18%), Postives = 47/78 (60.26%), Query Frame = 0


Query: 39  MYVTATRPNILFAVSMLSRFMTNPKRSHWEAGKRVLRYIIGTINFGIYYKKVSESVLFGF 98
           MY+T TRP++ FAV+ LS+F +  + +  +A  +VL Y+ GT+  G++Y   S+  L  F
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 99  CDSDKGGNVDDHKSTSGY 117
            DSD     D  +S +G+
Sbjct: 61  ADSDWASCPDTRRSVTGF 78

The following BLAST results are available for this feature:

BLAST of Pay0001713 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.9e-28	42.11	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q9ZT94	7.3e-28	42.31	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.6e-27	42.95	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P0CV72	2.0e-25	44.53	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
P04146	2.7e-22	40.59	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Pay0001713 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLV1	7.4e-84	93.41	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4...	[more]
A0A5D3BQ81	7.4e-84	93.41	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00890 PE=4...	[more]
A0A5D3E3T2	7.4e-84	93.41	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00030 PE=4...	[more]
A0A5D3D538	7.4e-84	93.41	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00090 PE=...	[more]
A0A5D3CXM6	7.4e-84	93.41	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001540 PE=...	[more]

BLAST of Pay0001713 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ95504.1	1.5e-83	93.41	integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. ma...	[more]
KAA0060377.1	1.5e-83	93.41	integrase [Cucumis melo var. makuwa]	[more]
KAA0039947.1	1.5e-83	93.41	integrase [Cucumis melo var. makuwa]	[more]
KAA0038926.1	1.5e-83	93.41	integrase [Cucumis melo var. makuwa]	[more]
KAA0048003.1	1.5e-83	93.41	integrase [Cucumis melo var. makuwa]	[more]

BLAST of Pay0001713 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	7.0e-26	39.26	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	3.2e-23	40.00	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	1.2e-09	37.18	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF335	SUBFAMILY NOT NAMED	coord: 17..147
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 17..147
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 97..165 e-value: 1.09603E-34 score: 116.799
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 23..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0001713.1	Pay0001713.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0008270	zinc ion binding