Pay0001534 (gene) Melon (Payzawat) v1

Overview


Name	Pay0001534
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	agamous-like MADS-box protein AGL62
Location	chr11: 1994338 .. 1995064 (+)
RNA-Seq Expression	Pay0001534
Synteny	Pay0001534

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCTATTTTCATCTTCTTCTTCTTCTTCTTCACAATGAAGAAATCATCAGGCCGTCAAAAAATCGAAATCAAGAAGCTAAATGTGAAGAGTAGGCGGCAAGTAACCTTCTCCAAACGCCGTGCCGGACTCTTCAACAAGGCAGCGGAACTCTCCATTCTTTCCGGCGCTGAGATTGCTATCCTCGTCTTCTCTTCCACCGGCAAAATCTATACATTCGGACATCCTAACGTTGATATGCTCATAGATCGTTTCCTGACGTCGAATTTTGTTCCGACGAAGCCGGCGGAAGCCTACCTCCCTTTGGAGGAGTTGAATCGTGATTTGAAGGATGCGACTGCGGAGTTTGAAATAGAGAAGATGCGGGCTGAGAGAATGAGGAATACCGGGGGGTTTTGGTGGGATGAGACGGAGATGGAATGTATGGGAATTGAGGAGTTGAAGCGATTCCGGTCGTCGTTGATGGAACTCAGGGGAAAAGTTGCGGAGAAAGTGGAGGAATTGGCGGCGGTGAATCAAGAGGTTCTAATCACTTCCCCGTCGTTTCATCATCACGCGACGACGATTGAGGATTTGGGGTTAGGGTTTCTCTAATTTTAGTGTTTAATTAAAAAGATAGAAAGATTTCAGATTAAGAGTGATTGATTTTAGATTAATTACTTCATTCTAAGTATGATTTTAAGAAATTAGTCGAACAAGAGTTTAGTTTTGTATACATAATCGATTAT

mRNA sequence

ACTCTATTTTCATCTTCTTCTTCTTCTTCTTCACAATGAAGAAATCATCAGGCCGTCAAAAAATCGAAATCAAGAAGCTAAATGTGAAGAGTAGGCGGCAAGTAACCTTCTCCAAACGCCGTGCCGGACTCTTCAACAAGGCAGCGGAACTCTCCATTCTTTCCGGCGCTGAGATTGCTATCCTCGTCTTCTCTTCCACCGGCAAAATCTATACATTCGGACATCCTAACGTTGATATGCTCATAGATCGTTTCCTGACGTCGAATTTTGTTCCGACGAAGCCGGCGGAAGCCTACCTCCCTTTGGAGGAGTTGAATCGTGATTTGAAGGATGCGACTGCGGAGTTTGAAATAGAGAAGATGCGGGCTGAGAGAATGAGGAATACCGGGGGGTTTTGGTGGGATGAGACGGAGATGGAATGTATGGGAATTGAGGAGTTGAAGCGATTCCGGTCGTCGTTGATGGAACTCAGGGGAAAAGTTGCGGAGAAAGTGGAGGAATTGGCGGCGGTGAATCAAGAGGTTCTAATCACTTCCCCGTCGTTTCATCATCACGCGACGACGATTGAGGATTTGGGGTTAGGGTTTCTCTAATTTTAGTGTTTAATTAAAAAGATAGAAAGATTTCAGATTAAGAGTGATTGATTTTAGATTAATTACTTCATTCTAAGTATGATTTTAAGAAATTAGTCGAACAAGAGTTTAGTTTTGTATACATAATCGATTAT

Coding sequence (CDS)

ATGAAGAAATCATCAGGCCGTCAAAAAATCGAAATCAAGAAGCTAAATGTGAAGAGTAGGCGGCAAGTAACCTTCTCCAAACGCCGTGCCGGACTCTTCAACAAGGCAGCGGAACTCTCCATTCTTTCCGGCGCTGAGATTGCTATCCTCGTCTTCTCTTCCACCGGCAAAATCTATACATTCGGACATCCTAACGTTGATATGCTCATAGATCGTTTCCTGACGTCGAATTTTGTTCCGACGAAGCCGGCGGAAGCCTACCTCCCTTTGGAGGAGTTGAATCGTGATTTGAAGGATGCGACTGCGGAGTTTGAAATAGAGAAGATGCGGGCTGAGAGAATGAGGAATACCGGGGGGTTTTGGTGGGATGAGACGGAGATGGAATGTATGGGAATTGAGGAGTTGAAGCGATTCCGGTCGTCGTTGATGGAACTCAGGGGAAAAGTTGCGGAGAAAGTGGAGGAATTGGCGGCGGTGAATCAAGAGGTTCTAATCACTTCCCCGTCGTTTCATCATCACGCGACGACGATTGAGGATTTGGGGTTAGGGTTTCTCTAA

Protein sequence

MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTFGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDLGLGFL

Homology

[Close]

BLAST of Pay0001534 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.3e-24
Identity = 70/193 (36.27%), Postives = 107/193 (55.44%), Query Frame = 0


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           +KKS GRQKIE+ K+  +S  QVTFSKRR+GLF KA+EL  L GAE+AI+VFS   K+++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVDMLIDRFLTSNFVP--------TKPAEAYLPLEELNRDLKDATAEFEIEKMRAE 120
           FGHPNVD +IDRF+ +N +P         +       +++LN  L    ++ E EK + +
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 RMRNTG------GFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLIT 180
            ++         G WW E  +E + + +L+ F+ +L  L+  V  +       N      
Sbjct: 122 ELKKIREKTKALGNWW-EDPVEELALSQLEGFKGNLENLKKVVTVEASRFFQANVPNFYV 181

[Close]

BLAST of Pay0001534 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-20
Identity = 69/172 (40.12%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 2   KKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTF 61
           K+S GRQKI + K+  +S RQVTFSKRRAGLF KA+EL  L GAEI I+VFS   K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVDMLIDRFLTSNFVPTKPAEAYLPLE----ELNRDLKDATAEFE--------IEKM 121
           GHP+V+ ++DR+++ N +    ++          ELN  L    +E E        +E+M
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 RAERMRNTGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQ 162
           R E +R +   WW E  +E M + +L+  + +L ELR  V   V  +A+ N+
Sbjct: 179 RKESVRRSMINWW-EKPVEEMNMVQLQEMKYALEELRKTV---VTNMASFNE 226

[Close]

BLAST of Pay0001534 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.9e-20
Identity = 67/178 (37.64%), Postives = 97/178 (54.49%), Query Frame = 0


Query: 2   KKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTF 61
           +K+ GR+KIE+ K+  +S  QVTFSKRR+GLF K +EL  L  AEIAI+VFS +GK Y+F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVDMLID----RFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEK------MRA 121
           GHPNV+ L+D    R +  N      +   L ++ LN  L +  AE E E+      ++ 
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQN 122

Query: 122 ERMRNTGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPS 170
           ER       WW  +  E + + +    +  L  L+ +V EKV +L   N    + S S
Sbjct: 123 ERENKDAEKWWRNSPTE-LNLAQSTSMKCDLEALKKEVDEKVAQLHHRNLNFYVGSSS 179

[Close]

BLAST of Pay0001534 vs. ExPASy Swiss-Prot
Match: O80807 (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.0e-19
Identity = 65/181 (35.91%), Postives = 103/181 (56.91%), Query Frame = 0


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           +KK+ GR+K+EI K+  +S  QVTFSKR+AGLF KA+E   L  A+IA++VFS  GK+++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVDMLIDRF----LTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIE------KMR 120
           FGHPNVD+L+D F    +  N      +   L ++ LN+   +  AE E E      + +
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

Query: 121 AERMRNTGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSF 172
            ER       WW ++ +E + + +       L +L+  V EK  +L  ++Q    T+P+F
Sbjct: 122 NERENENAEEWWSKSPLE-LNLSQSTCMIRVLKDLKKIVDEKAIQL--IHQ----TNPNF 175

[Close]

BLAST of Pay0001534 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.3e-16
Identity = 58/169 (34.32%), Postives = 96/169 (56.80%), Query Frame = 0


Query: 6   GRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTFGHPN 65
           GR+KI+++ +   + RQVTFSKRR GLF KA+EL+ L  AE+ I+VFS  GK +++G PN
Sbjct: 2   GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPN 61

Query: 66  VDMLIDRFL----TSNFVPTKPAEAYLP-LEELNRDLKDATAEFEIEKMRAERMRNTGGF 125
           +D + +RF+     S+    + +  Y P L+ L+  L     E E EK R E+ +     
Sbjct: 62  LDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLES 121

Query: 126 WWDE---TEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLIT 167
             DE     +E + ++EL  ++  L  + G++  +V  L A +  +L++
Sbjct: 122 AGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQASSCLMLLS 170

[Close]

BLAST of Pay0001534 vs. ExPASy TrEMBL
Match: A0A5A7TV93 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003090 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.0e-96
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120
           FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120

Query: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDL 180
           WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDL
Sbjct: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDL 180

Query: 181 GLGFL 186
           GLGFL
Sbjct: 181 GLGFL 185

[Close]

BLAST of Pay0001534 vs. ExPASy TrEMBL
Match: A0A1S3C5V9 (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103497390 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.0e-96
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120
           FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120

Query: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDL 180
           WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDL
Sbjct: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDL 180

Query: 181 GLGFL 186
           GLGFL
Sbjct: 181 GLGFL 185

[Close]

BLAST of Pay0001534 vs. ExPASy TrEMBL
Match: A0A5D3BKF4 (Aspartic proteinase CDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00600 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.5e-93
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120
           FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120

Query: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDL 180
           WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDL
Sbjct: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDL 180

Query: 181 G 182
           G
Sbjct: 181 G 181

[Close]

BLAST of Pay0001534 vs. ExPASy TrEMBL
Match: A0A0A0LLS2 (Mads box protein OS=Cucumis sativus OX=3659 GN=Csa_2G277060 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.2e-76
Identity = 161/183 (87.98%), Postives = 164/183 (89.62%), Query Frame = 0


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           MKKS GRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSST KIYT
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120
           FGHPNVD LIDRFLTSNFVP KP EAYLPLEELNRDLKD TAEFE EK RAERMR TGGF
Sbjct: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120

Query: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFHH--HATTI 180
           WWDE  MECMGIE+LKRFRSSLMELRGKVAE+VEELAAV NQ  L TSPSFHH   AT I
Sbjct: 121 WWDEA-MECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNQGFLTTSPSFHHLSVATEI 180

[Close]

BLAST of Pay0001534 vs. ExPASy TrEMBL
Match: A0A5D3CLQ1 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001380 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 6.2e-52
Identity = 118/158 (74.68%), Postives = 133/158 (84.18%), Query Frame = 0


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           MKKS GR+KIEIKKL+ KS +QVTFSKRRAGLFNKAAELSIL GAEIA+LVFSS GKIYT
Sbjct: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60

Query: 61  FGHPNVDMLIDRFLT-SNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMR-AERMRNTG 120
           FGHPNVD L+DRFLT +N VP KPAEAYLP+ ELNRDL  A AEFEIEK R AER RN+ 
Sbjct: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120

Query: 121 GFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEEL 157
            FWWDE  +E M I+ELKRFRSSL+ELR  V E++E++
Sbjct: 121 RFWWDE-PLESMKIDELKRFRSSLVELRANVVERLEKI 157

[Close]

BLAST of Pay0001534 vs. NCBI nr
Match: XP_008457781.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo] >KAA0045787.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa])

HSP 1 Score: 359.8 bits (922), Expect = 1.4e-95
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120
           FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120

Query: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDL 180
           WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDL
Sbjct: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDL 180

Query: 181 GLGFL 186
           GLGFL
Sbjct: 181 GLGFL 185

[Close]

BLAST of Pay0001534 vs. NCBI nr
Match: TYJ99494.1 (aspartic proteinase CDR1-like [Cucumis melo var. makuwa])

HSP 1 Score: 352.1 bits (902), Expect = 3.0e-93
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120
           FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120

Query: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDL 180
           WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDL
Sbjct: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDL 180

Query: 181 G 182
           G
Sbjct: 181 G 181

[Close]

BLAST of Pay0001534 vs. NCBI nr
Match: XP_004149713.1 (agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN61964.1 hypothetical protein Csa_006560 [Cucumis sativus])

HSP 1 Score: 295.8 bits (756), Expect = 2.6e-76
Identity = 161/183 (87.98%), Postives = 164/183 (89.62%), Query Frame = 0


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           MKKS GRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSST KIYT
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120
           FGHPNVD LIDRFLTSNFVP KP EAYLPLEELNRDLKD TAEFE EK RAERMR TGGF
Sbjct: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120

Query: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFHH--HATTI 180
           WWDE  MECMGIE+LKRFRSSLMELRGKVAE+VEELAAV NQ  L TSPSFHH   AT I
Sbjct: 121 WWDEA-MECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNQGFLTTSPSFHHLSVATEI 180

[Close]

BLAST of Pay0001534 vs. NCBI nr
Match: XP_038902722.1 (agamous-like MADS-box protein AGL62 [Benincasa hispida])

HSP 1 Score: 263.1 bits (671), Expect = 1.8e-66
Identity = 150/208 (72.12%), Postives = 166/208 (79.81%), Query Frame = 0


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           MKKS GRQKIEIKKL VKSR+QVTFSKRRAGLFNKAAELSIL GAEIAILVFS TGKIYT
Sbjct: 1   MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIAILVFSPTGKIYT 60

Query: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRA---ERMRNT 120
           FGHPNVD+L+DR LT+NF P KPAE+YLPL ELNRD  DA AEFEIEK RA   ERMR++
Sbjct: 61  FGHPNVDLLLDRSLTANFAPPKPAESYLPLAELNRDFDDAMAEFEIEKRRAAEVERMRSS 120

Query: 121 GGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFH----- 180
           GGFWWDE  +ECMGIE+LKRFRSSL+ELRGKVAE+VE+LAAV N  +L+ + SFH     
Sbjct: 121 GGFWWDE-PVECMGIEDLKRFRSSLVELRGKVAERVEKLAAVRNGGLLMPAASFHLTGNL 180

Query: 181 ------------HH--ATTIEDLGLGFL 186
                       +H  AT IEDLGLGFL
Sbjct: 181 QCAPLPPFHLAGNHSVATEIEDLGLGFL 207

[Close]

BLAST of Pay0001534 vs. NCBI nr
Match: KAE8637358.1 (hypothetical protein CSA_011908 [Cucumis sativus])

HSP 1 Score: 213.8 bits (543), Expect = 1.3e-51
Identity = 115/171 (67.25%), Postives = 138/171 (80.70%), Query Frame = 0


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           MKKSSGR+KIEIK+L+  + RQVTFSKRR GLFNKAAELS+L GAEIAIL+FSS GK+YT
Sbjct: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60

Query: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRA-ERMRNTGG 120
           FGHPNVD L+DRFLT NF+P KPAEAYLPL ELN DL  A AEFEIEK RA ER+RN+  
Sbjct: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSER 120

Query: 121 FWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSF 171
           FWWDE  +E M ++ELK FRSSL++LR  VA ++E++ A+  E    +PS+
Sbjct: 121 FWWDEA-LERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSW 170

[Close]

BLAST of Pay0001534 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 112.5 bits (280), Expect = 3.7e-25
Identity = 70/193 (36.27%), Postives = 107/193 (55.44%), Query Frame = 0


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           +KKS GRQKIE+ K+  +S  QVTFSKRR+GLF KA+EL  L GAE+AI+VFS   K+++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVDMLIDRFLTSNFVP--------TKPAEAYLPLEELNRDLKDATAEFEIEKMRAE 120
           FGHPNVD +IDRF+ +N +P         +       +++LN  L    ++ E EK + +
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 RMRNTG------GFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLIT 180
            ++         G WW E  +E + + +L+ F+ +L  L+  V  +       N      
Sbjct: 122 ELKKIREKTKALGNWW-EDPVEELALSQLEGFKGNLENLKKVVTVEASRFFQANVPNFYV 181

[Close]

BLAST of Pay0001534 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 101.3 bits (251), Expect = 8.6e-22
Identity = 69/172 (40.12%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 2   KKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTF 61
           K+S GRQKI + K+  +S RQVTFSKRRAGLF KA+EL  L GAEI I+VFS   K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVDMLIDRFLTSNFVPTKPAEAYLPLE----ELNRDLKDATAEFE--------IEKM 121
           GHP+V+ ++DR+++ N +    ++          ELN  L    +E E        +E+M
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 RAERMRNTGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQ 162
           R E +R +   WW E  +E M + +L+  + +L ELR  V   V  +A+ N+
Sbjct: 179 RKESVRRSMINWW-EKPVEEMNMVQLQEMKYALEELRKTV---VTNMASFNE 226

[Close]

BLAST of Pay0001534 vs. TAIR 10
Match: AT1G01530.1 (AGAMOUS-like 28 )

HSP 1 Score: 98.6 bits (244), Expect = 5.6e-21
Identity = 67/178 (37.64%), Postives = 97/178 (54.49%), Query Frame = 0


Query: 2   KKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTF 61
           +K+ GR+KIE+ K+  +S  QVTFSKRR+GLF K +EL  L  AEIAI+VFS +GK Y+F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVDMLID----RFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEK------MRA 121
           GHPNV+ L+D    R +  N      +   L ++ LN  L +  AE E E+      ++ 
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQN 122

Query: 122 ERMRNTGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPS 170
           ER       WW  +  E + + +    +  L  L+ +V EKV +L   N    + S S
Sbjct: 123 ERENKDAEKWWRNSPTE-LNLAQSTSMKCDLEALKKEVDEKVAQLHHRNLNFYVGSSS 179

[Close]

BLAST of Pay0001534 vs. TAIR 10
Match: AT4G36590.1 (MADS-box transcription factor family protein )

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-20
Identity = 65/180 (36.11%), Postives = 100/180 (55.56%), Query Frame = 0


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           ++ + GRQKIE+KK+  +S  QVTFSKRR GLF KA+EL  LSGAEI ++VFS  GK+++
Sbjct: 2   VRSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFS 61

Query: 61  FGHPNVDMLIDRFLTSN--------------FVPTKPAEAYLPLEELNRDLKDATAEFEI 120
           FGHP+V  LI RF   N               V T+P      ++ LN  L +  A  E 
Sbjct: 62  FGHPSVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDR---NIQYLNNILTEVLANQEK 121

Query: 121 EKMR------AERMRNTGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVN 161
           EK +       +  R   G W+ E +++ + + E  +  S+L +++ K+  ++ + + VN
Sbjct: 122 EKQKRMVLDLLKESREQVGNWY-EKDVKDLDMNETNQLISALQDVKKKLVREMSQYSQVN 177

[Close]

BLAST of Pay0001534 vs. TAIR 10
Match: AT1G65360.1 (AGAMOUS-like 23 )

HSP 1 Score: 96.7 bits (239), Expect = 2.1e-20
Identity = 65/181 (35.91%), Postives = 103/181 (56.91%), Query Frame = 0


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           +KK+ GR+K+EI K+  +S  QVTFSKR+AGLF KA+E   L  A+IA++VFS  GK+++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVDMLIDRF----LTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIE------KMR 120
           FGHPNVD+L+D F    +  N      +   L ++ LN+   +  AE E E      + +
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

Query: 121 AERMRNTGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSF 172
            ER       WW ++ +E + + +       L +L+  V EK  +L  ++Q    T+P+F
Sbjct: 122 NERENENAEEWWSKSPLE-LNLSQSTCMIRVLKDLKKIVDEKAIQL--IHQ----TNPNF 175

The following BLAST results are available for this feature:

BLAST of Pay0001534 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK2	5.3e-24	36.27	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
Q4PSU4	1.2e-20	40.12	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
Q9LMM8	7.9e-20	37.64	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]
O80807	3.0e-19	35.91	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]
O64703	5.3e-16	34.32	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]

BLAST of Pay0001534 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TV93	7.0e-96	100.00	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3C5V9	7.0e-96	100.00	agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103497390 PE=4...	[more]
A0A5D3BKF4	1.5e-93	100.00	Aspartic proteinase CDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A0A0LLS2	1.2e-76	87.98	Mads box protein OS=Cucumis sativus OX=3659 GN=Csa_2G277060 PE=4 SV=1	[more]
A0A5D3CLQ1	6.2e-52	74.68	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Pay0001534 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457781.1	1.4e-95	100.00	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo] >KAA0045787.1 agam...	[more]
TYJ99494.1	3.0e-93	100.00	aspartic proteinase CDR1-like [Cucumis melo var. makuwa]	[more]
XP_004149713.1	2.6e-76	87.98	agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN61964.1 hypothetical p...	[more]
XP_038902722.1	1.8e-66	72.12	agamous-like MADS-box protein AGL62 [Benincasa hispida]	[more]
KAE8637358.1	1.3e-51	67.25	hypothetical protein CSA_011908 [Cucumis sativus]	[more]

BLAST of Pay0001534 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60440.1	3.7e-25	36.27	AGAMOUS-like 62	[more]
AT2G24840.1	8.6e-22	40.12	AGAMOUS-like 61	[more]
AT1G01530.1	5.6e-21	37.64	AGAMOUS-like 28	[more]
AT4G36590.1	1.6e-20	36.11	MADS-box transcription factor family protein	[more]
AT1G65360.1	2.1e-20	35.91	AGAMOUS-like 23	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 90..117
None	No IPR available	COILS	Coil	Coil	coord: 142..162
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 5..157
None	No IPR available	PANTHER	PTHR11945:SF618	AGAMOUS-LIKE MADS-BOX PROTEIN AGL61	coord: 5..157
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 42..63 score: 40.28 coord: 27..42 score: 65.84 coord: 7..27 score: 51.63
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 5..64 e-value: 6.1E-29 score: 112.1
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 18..61 e-value: 2.8E-21 score: 74.8
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 5..65 score: 25.553116
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 18..83 e-value: 5.4E-26 score: 92.2
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 6..79
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 6..77 e-value: 6.76009E-34 score: 113.416

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0001534.1	Pay0001534.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006508	proteolysis
cellular_component	GO:0072546	EMC complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding