Pay0000111 (gene) Melon (Payzawat) v1

Overview
NamePay0000111
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description40S ribosomal protein S25
Locationchr03: 21818314 .. 21820850 (+)
RNA-Seq ExpressionPay0000111
SyntenyPay0000111
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCCCTTCCAGCCGAAGCCCTTGGAACTCCTTCACTCAAACCCTAGAAACCAAATCTCATGGTGAGTTTCTTTCCTCTTTTGTTTATTCGAATAGTTTGTTCTTCCTTCTGATTCTCGTTTCGTCTTTGTAACTTCCGATGTACTGATTATACATGATGTGTGATGTCGTTTCGTTTGTTGTCATCGTTTTGAATCTTAGGCGCCGAAGAAGGACAAGGCTCCTCCACCGTCCTCTAAGCCTGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGGTAAGCTTCTTAAATTTAAGTTCTGCTTGCTCCTTCATGATTAGTATGCCAATACTTGCTTATCTCATCGTTCAAGATCATTAGGTAAGATTTAATCGTTTTAATTTCCTCGTGTTACTGCATTGCTAGCGTTAAGTGCTCTTTCCGAAGTTAGTATCGTTGTATTTTATTTCGATACTGGAATTTGGAATTATCTTTTGTAATTTGATCTTTTTATGTCGTGTAGCATATAATTTTTTCGTCATACTGATAATGAGATAGTGACGTTTATATTCGATTAGAATTAGAATGAAGGGACGATAAAAACCTTGAAAAATACAAGAGATTTTTGAAAGTTGGTGATGTTTGTTGAGTTTGAGGAAGAGTTTGCTTGTAATATGGCCATTATTGTTATTTTACATGTCATTTGGTTTGCAGAAATGGAGCAAGGGTAAGCAAAAGGAGAAGGTGAACAACATGGTTTTGTTTGATCAGGGGACTTATGATAAGCTCCTTTCTGAAGTTCCCAAGTACAAGCTAGTCACTCCGTCTATCCTTTCTGATAGATTGAGGGTATGTTTTTTTTTTTTAATTTTTTTTTTCTGTTTCCATCCATCAATTCCTCAATTTTATTGATTTATTTTTTTGTTCGTGTTTAGAATATATTGTAAAGAAGCTGAGATTTGTCCAAACCTATCAAAATGAGTTTTGAAATGTAGTGGTGATTGGACTGGTGATTCCTAAGGTTTTTAATTAATTAAAAAAGAGCCCCACCTAGTTAAGTGTACTGATGACCATGAAATTTATGCTCAAGACCCCCTTGAAAATCAAGCCAATAAACATCCCTTCTACTTCTAAATTTCTTTGCTTTTGTTATCTACTTTCTACCTTTACTTTGAAAAACCAAGTGAGGCTTTGAGAGCTAGAAAAAGTTGTTTTTTACAAATCTGCTTTTGTTTTTGGCAAGGGTTTTTAAAATATTGGTATTGAATGAGTGTTTATAAGCCTAAGAAAGCAAGGAATTTATATGTGGAATGAGTGTTTGTAGGCTTAATTTTCAAAAACTTGTATTTATACGTGGAAGGAGTGTAAGTGTGTATAGGCTTAATTTGAATTTAGACGTGGGATGAGGGTTTATAGGCGTAATTTTCAAAAACTAAAAATCATTAAGACAGACCTAAAGTGTTTTCCAAATGATTGACTGACTTATCCTGATAGCACCTTCTACAGCAATTCACTAATGGTTTCCTTTGTCATGTACAATTACCAGATCAATGGATCATTAGCACGAAGAGCAATTAAGGATTTGATGGCTCGAGGTTCCATCAGAATGATATCGGCTCACTCGAGTCAGCAGATCTACACCAGAGCAACCAACACCTAAGGACAACAATTCATTTCACTTATGCCCGAGAGGGTATATAATAGATATGTAGTTGCCTTTCCATTTTGCAAGTCCAAATTTTGTTGAGTGATCAAATTATCATTTTAGTTTGTTAACGGCAGAATGAACTCTAAAAGAGACGTTTTTAATTTGTTAATGTGCACGAATTTGTTTGCGGTGCGGGTCTTAACTTGTGTGATGAATTGTGTCGCATTGGCTGTTGTCTGCCTTTTCTCTTTCCTACTGCCAAGTACTAATCATAATGTTTGTATGTAGAATCTCGTTTTAGATGAAAGTTGGTAATCTAACGTGGCTTTGACATTAGCGTTGTTTGAACAACTCTTGGATTTCGTTTCACTATGTTGAGAAAAACATGATGATTTGAGGGTCGGGTTTAATCTAAAATCTACATTGCATGTTGATGTTCTTTTTGTTTAATTTTGAAACACAAGTCATTTTTAAAAGAAATGAATCAAAATGATTTTTTGAAAAGGTATTTTAAATTGCTTGAGCTTGAATAAAAATGACTTCGAATAGCATTTGTTAAAATTATTCTATCTTGACTATACGCTACACATTTGATACACGTATCAATGGCAGTGGCGTGATGAAGGAGACGACTAAGGGGTGTGGAGAGGTAGACAGCACGCGAAGGGATTGAGTGTGTGAAGAGGGAGATGGCGTGCGACGGAGACTGAGTGTGAAGAAGAAGGAGACGACAAATGAAGGATAAAGAATCTGAGAAGAGAGAATGACCTAAGTTCTTAATACTTTATTCAATAAATAATAAAAAATATATAACATAAATATATGTATATATATATTATTAGTTCAGGTTGTCGGATTATTCAGGTTGGACTTACCCCTATTTTTTACACAAAATGCTGCAAAGTTGAG

mRNA sequence

CTTTCCCTTCCAGCCGAAGCCCTTGGAACTCCTTCACTCAAACCCTAGAAACCAAATCTCATGGCGCCGAAGAAGGACAAGGCTCCTCCACCGTCCTCTAAGCCTGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGTAAGCAAAAGGAGAAGGTGAACAACATGGTTTTGTTTGATCAGGGGACTTATGATAAGCTCCTTTCTGAAGTTCCCAAGTACAAGCTAGTCACTCCGTCTATCCTTTCTGATAGATTGAGGATCAATGGATCATTAGCACGAAGAGCAATTAAGGATTTGATGGCTCGAGGTTCCATCAGAATGATATCGGCTCACTCGAGTCAGCAGATCTACACCAGAGCAACCAACACCTAAGGACAACAATTCATTTCACTTATGCCCGAGAGGTGGCGTGATGAAGGAGACGACTAAGGGGTGTGGAGAGGTAGACAGCACGCGAAGGGATTGAGTGTGTGAAGAGGGAGATGGCGTGCGACGGAGACTGAGTGTGAAGAAGAAGGAGACGACAAATGAAGGATAAAGAATCTGAGAAGAGAGAATGACCTAAGTTCTTAATACTTTATTCAATAAATAATAAAAAATATATAACATAAATATATGTATATATATATTATTAGTTCAGGTTGTCGGATTATTCAGGTTGGACTTACCCCTATTTTTTACACAAAATGCTGCAAAGTTGAG

Coding sequence (CDS)

ATGGCGCCGAAGAAGGACAAGGCTCCTCCACCGTCCTCTAAGCCTGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGTAAGCAAAAGGAGAAGGTGAACAACATGGTTTTGTTTGATCAGGGGACTTATGATAAGCTCCTTTCTGAAGTTCCCAAGTACAAGCTAGTCACTCCGTCTATCCTTTCTGATAGATTGAGGATCAATGGATCATTAGCACGAAGAGCAATTAAGGATTTGATGGCTCGAGGTTCCATCAGAATGATATCGGCTCACTCGAGTCAGCAGATCTACACCAGAGCAACCAACACCTAA

Protein sequence

MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Homology
[Close]
BLAST of Pay0000111 vs. ExPASy Swiss-Prot
Match: Q9SIK2 (40S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 4.4e-47
Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G IRM+SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]
BLAST of Pay0000111 vs. ExPASy Swiss-Prot
Match: Q8GYL5 (40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2)

HSP 1 Score: 185.3 bits (469), Expect = 3.7e-46
Identity = 96/107 (89.72%), Postives = 104/107 (97.20%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSE PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATN 108
           +TPSILSDRLRINGSLARRAI++LMA+G+IRM+SAHSSQQIYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]
BLAST of Pay0000111 vs. ExPASy Swiss-Prot
Match: P46301 (40S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 3.7e-46
Identity = 96/108 (88.89%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ TYDKLLSE PKYKL
Sbjct: 1   MAPKKAQAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDKSTYDKLLSEAPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPS+LSDRLRI+GSLAR+AI+DLMARGSIRM+SAH+SQQIYTRATNT
Sbjct: 61  ITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAHASQQIYTRATNT 108

[Close]
BLAST of Pay0000111 vs. ExPASy Swiss-Prot
Match: Q9T029 (40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 4.9e-46
Identity = 95/108 (87.96%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G IRM++AHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]
BLAST of Pay0000111 vs. ExPASy Swiss-Prot
Match: Q9SIW5 (40S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3)

HSP 1 Score: 178.3 bits (451), Expect = 4.6e-44
Identity = 92/106 (86.79%), Postives = 100/106 (94.34%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL+SE PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRAT 107
           +TPSILSDRLRINGSLAR+AI+DLM +G+IRM+S HSSQQI TRAT
Sbjct: 61  ITPSILSDRLRINGSLARKAIRDLMVKGTIRMVSTHSSQQINTRAT 106

[Close]
BLAST of Pay0000111 vs. ExPASy TrEMBL
Match: A0A5D3CKR9 (40S ribosomal protein S25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00850 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]
BLAST of Pay0000111 vs. ExPASy TrEMBL
Match: A0A6J1BYI5 (40S ribosomal protein S25 OS=Momordica charantia OX=3673 GN=LOC111006746 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]
BLAST of Pay0000111 vs. ExPASy TrEMBL
Match: A0A1S3C4W3 (40S ribosomal protein S25 OS=Cucumis melo OX=3656 GN=LOC103496510 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]
BLAST of Pay0000111 vs. ExPASy TrEMBL
Match: A0A0A0KB40 (40S ribosomal protein S25 OS=Cucumis sativus OX=3659 GN=Csa_6G045180 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.2e-48
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDR+R+NGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]
BLAST of Pay0000111 vs. ExPASy TrEMBL
Match: A0A6J1GMB9 (40S ribosomal protein S25 OS=Cucurbita moschata OX=3662 GN=LOC111455806 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.1e-48
Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAIKDLMARGSIRMISAHSSQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQEIYTRATNT 108

[Close]
BLAST of Pay0000111 vs. NCBI nr
Match: XP_008456601.1 (PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo] >XP_022134525.1 40S ribosomal protein S25-2-like [Momordica charantia] >TYK11764.1 40S ribosomal protein S25-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 201.8 bits (512), Expect = 2.9e-48
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]
BLAST of Pay0000111 vs. NCBI nr
Match: XP_004140903.1 (40S ribosomal protein S25-2 [Cucumis sativus] >KGN46039.1 hypothetical protein Csa_005769 [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 6.5e-48
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDR+R+NGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]
BLAST of Pay0000111 vs. NCBI nr
Match: XP_038885543.1 (40S ribosomal protein S25 [Benincasa hispida])

HSP 1 Score: 199.9 bits (507), Expect = 1.1e-47
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAH SQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHPSQQIYTRATNT 108

[Close]
BLAST of Pay0000111 vs. NCBI nr
Match: XP_022953196.1 (40S ribosomal protein S25-2 [Cucurbita moschata] >XP_023533034.1 40S ribosomal protein S25-2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023533042.1 40S ribosomal protein S25-2 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6602255.1 40S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47
Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAIKDLMARGSIRMISAHSSQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQEIYTRATNT 108

[Close]
BLAST of Pay0000111 vs. NCBI nr
Match: XP_021897361.1 (40S ribosomal protein S25 [Carica papaya])

HSP 1 Score: 198.7 bits (504), Expect = 2.5e-47
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDRLRI+GSLARRAIKDLMARGSIRMISAH+SQQIYTRATNT
Sbjct: 61  VTPSILSDRLRISGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT 108

[Close]
BLAST of Pay0000111 vs. TAIR 10
Match: AT2G21580.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 188.3 bits (477), Expect = 3.1e-48
Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G IRM+SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]
BLAST of Pay0000111 vs. TAIR 10
Match: AT4G34555.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 185.3 bits (469), Expect = 2.7e-47
Identity = 96/107 (89.72%), Postives = 104/107 (97.20%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSE PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATN 108
           +TPSILSDRLRINGSLARRAI++LMA+G+IRM+SAHSSQQIYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]
BLAST of Pay0000111 vs. TAIR 10
Match: AT4G39200.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 184.9 bits (468), Expect = 3.5e-47
Identity = 95/108 (87.96%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G IRM++AHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]
BLAST of Pay0000111 vs. TAIR 10
Match: AT2G21580.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 182.2 bits (461), Expect = 2.2e-46
Identity = 96/108 (88.89%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQGTYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G IRM+SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 107

[Close]
BLAST of Pay0000111 vs. TAIR 10
Match: AT4G39200.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 178.7 bits (452), Expect = 2.5e-45
Identity = 94/108 (87.04%), Postives = 103/108 (95.37%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G IRM++AHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 107

The following BLAST results are available for this feature:
BLAST of Pay0000111 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SIK24.4e-4789.8140S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1[more]
Q8GYL53.7e-4689.7240S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2[more]
P463013.7e-4688.8940S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1[more]
Q9T0294.9e-4687.9640S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1[more]
Q9SIW54.6e-4486.7940S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3[more]
BLAST of Pay0000111 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CKR91.4e-48100.0040S ribosomal protein S25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A6J1BYI51.4e-48100.0040S ribosomal protein S25 OS=Momordica charantia OX=3673 GN=LOC111006746 PE=3 SV... [more]
A0A1S3C4W31.4e-48100.0040S ribosomal protein S25 OS=Cucumis melo OX=3656 GN=LOC103496510 PE=3 SV=1[more]
A0A0A0KB403.2e-4898.1540S ribosomal protein S25 OS=Cucumis sativus OX=3659 GN=Csa_6G045180 PE=3 SV=1[more]
A0A6J1GMB97.1e-4897.2240S ribosomal protein S25 OS=Cucurbita moschata OX=3662 GN=LOC111455806 PE=3 SV=... [more]
BLAST of Pay0000111 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008456601.12.9e-48100.00PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo] >XP_022134525.1 40S r... [more]
XP_004140903.16.5e-4898.1540S ribosomal protein S25-2 [Cucumis sativus] >KGN46039.1 hypothetical protein C... [more]
XP_038885543.11.1e-4799.0740S ribosomal protein S25 [Benincasa hispida][more]
XP_022953196.11.5e-4797.2240S ribosomal protein S25-2 [Cucurbita moschata] >XP_023533034.1 40S ribosomal p... [more]
XP_021897361.12.5e-4798.1540S ribosomal protein S25 [Carica papaya][more]
BLAST of Pay0000111 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G21580.13.1e-4889.81Ribosomal protein S25 family protein [more]
AT4G34555.12.7e-4789.72Ribosomal protein S25 family protein [more]
AT4G39200.13.5e-4787.96Ribosomal protein S25 family protein [more]
AT2G21580.22.2e-4688.89Ribosomal protein S25 family protein [more]
AT4G39200.22.5e-4587.04Ribosomal protein S25 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004977Ribosomal protein S25PFAMPF03297Ribosomal_S25coord: 7..105
e-value: 6.1E-42
score: 141.9
IPR004977Ribosomal protein S25PANTHERPTHR1285040S RIBOSOMAL PROTEIN S25coord: 2..108
NoneNo IPR availableGENE3D3.30.63.20coord: 21..108
e-value: 3.0E-41
score: 141.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availablePANTHERPTHR12850:SF31BNAA04G12260D PROTEINcoord: 2..108

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0000111.2Pay0000111.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0022627 cytosolic small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome