PI0029064 (gene) Melon (PI 482460) v1

Overview


Name	PI0029064
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	E3 ubiquitin-protein ligase ATL42-like
Location	chr02: 15359169 .. 15360857 (-)
RNA-Seq Expression	PI0029064
Synteny	PI0029064

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGATTGTTTCTTTTGGCTGCTAGAAATTTTGTGCAACTTATCATTTGATGTAAATATTCAACCTACCAATCTTCAAATGATTCACAAAGTTAATTCTCAACAACTCCAAGTCCTTAGAAAGCTACAAAAGGCTATAATTTCAACCAGAGATAGGAAGTGTTCTTGTTCTTGCAAAGTTCCATTTAGAGTTTAAAAGAGTTTTTTCATGAGTTTTCATGAGTTTTCTCCATGGGTAAGTTGAGTAGAATCATTATGATCATTTTGACTATTTTTCTTTTTCCTGTCATTGCACAAGCACCTTCTCCACCAAAAGCTGGTTCTGGTATTCCACAAAATTTCACCATTGTTATTGGAATCCTCTCCATCATGTTCTCCATGGTCTTCATCCTTGTTGTTTATGCAAAATTCTGTCACCCGACTTCCCATTTTCGTGGCGAACCCCAAGCTCATCTCGGGCATGGACTTCTCAGATCAGACTCAAGATTTTCTGGGGTTGATCAAAAGGTGATTGATGCACTTCCTTTCTTTAGATTCTCATCACTCAAAGGATCAAGGGAAGGGCTGGAATGTGCTGTTTGCTTATCCAAATTTGAGGAAATTGAAGTCCTTCGGTTGCTACCAAAATGCAAGCATGCCTTTCACATTGGCTGTATTGACCATTGGCTCGAAAAGCACTCGAGCTGTCCCATTTGTCGGTGTAGAATAAGTGTCGAGGACGTTGCATTCTTTAAATCTAACAGTATAAGACTAATGAGGAACAACAGCCAGCCAGAGCTGCCACAAGATTCATACATGGAGCTCTTTGTGCAGAGAGAGGAAAATCATCATAACTCTTCCAGGTCCAACAATGGAACCAGCTTCAGGAAAATAGGAAAAGGTAACAAGGAAAAAGAAGTATTGATCGAAAGTGAAGCTGGTGCATGCGAAAGTGAGGAGCGAGTGCTCTTTCACAAGCATAAACACAAGATTCTTGTATCCGACTTTGTTTTCATGAACAGATGGAGCAACTTGAGTTCTTCTGACCTTATGTTCTTGAACACAGAAATGCTTGGGGCCATGTCTAGCAATAGATTCTCTTCTTTGGATTCAGAAAGCATTCGCGGATCAGCAACAAGAGAAAGAGAAGGCAAAAGGACTTTACAAATTAAGGAAGAAATGGAAATGAAGAGATCATTTGAGAGAAGGATAAGCATAGCTGAGAAAAATAGCTTAGTTTCAATCTCAGGTATTTCCTCTACATCAGATTCTAATTCAAGTACATCAAGGACAACAAATCTTAATGAAAGATCTGTCTCAGACACCACTGCTTTTTCAAGATTTGGTTATTTTAATGAGAATGCAATAAGAGACAGTTCTATGATTGAAGCTGATGCAAAAAATTACAGAATTAGGCAGCTATGGTTGCCAATAGCTAGAAGAACAGTGCAATGGTTTGCCAATAGGGAACAAAGGTCTCGACTGTCAAAGTACACACAGCAGCCAGATGCATAGACAAAATGAATCTCAAGGGTTTGCTATCCTTGTTTAAAAATATAGTCATTTGATTCTTTTCTAATCATGTAAAATGGATCTTTTTGTTCTTTTTTCTCTTGGGTGTTGTTACAGAGGTGAGAGGCTGCTGTCTTCTAATCCAAAAGTTTGAGTTATTTTGGAGACTTTTCTTAAACATGAACCCAATTTAGTCATAA

mRNA sequence

AAGATTGTTTCTTTTGGCTGCTAGAAATTTTGTGCAACTTATCATTTGATGTAAATATTCAACCTACCAATCTTCAAATGATTCACAAAGTTAATTCTCAACAACTCCAAGTCCTTAGAAAGCTACAAAAGGCTATAATTTCAACCAGAGATAGGAAGTGTTCTTGTTCTTGCAAAGTTCCATTTAGAGTTTAAAAGAGTTTTTTCATGAGTTTTCATGAGTTTTCTCCATGGGTAAGTTGAGTAGAATCATTATGATCATTTTGACTATTTTTCTTTTTCCTGTCATTGCACAAGCACCTTCTCCACCAAAAGCTGGTTCTGGTATTCCACAAAATTTCACCATTGTTATTGGAATCCTCTCCATCATGTTCTCCATGGTCTTCATCCTTGTTGTTTATGCAAAATTCTGTCACCCGACTTCCCATTTTCGTGGCGAACCCCAAGCTCATCTCGGGCATGGACTTCTCAGATCAGACTCAAGATTTTCTGGGGTTGATCAAAAGGTGATTGATGCACTTCCTTTCTTTAGATTCTCATCACTCAAAGGATCAAGGGAAGGGCTGGAATGTGCTGTTTGCTTATCCAAATTTGAGGAAATTGAAGTCCTTCGGTTGCTACCAAAATGCAAGCATGCCTTTCACATTGGCTGTATTGACCATTGGCTCGAAAAGCACTCGAGCTGTCCCATTTGTCGGTGTAGAATAAGTGTCGAGGACGTTGCATTCTTTAAATCTAACAGTATAAGACTAATGAGGAACAACAGCCAGCCAGAGCTGCCACAAGATTCATACATGGAGCTCTTTGTGCAGAGAGAGGAAAATCATCATAACTCTTCCAGGTCCAACAATGGAACCAGCTTCAGGAAAATAGGAAAAGAAATGCTTGGGGCCATGTCTAGCAATAGATTCTCTTCTTTGGATTCAGAAAGCATTCGCGGATCAGCAACAAGAGAAAGAGAAGGCAAAAGGACTTTACAAATTAAGGAAGAAATGGAAATGAAGAGATCATTTGAGAGAAGGATAAGCATAGCTGAGAAAAATAGCTTAGTTTCAATCTCAGGTATTTCCTCTACATCAGATTCTAATTCAAGTACATCAAGGACAACAAATCTTAATGAAAGATCTGTCTCAGACACCACTGCTTTTTCAAGATTTGGTTATTTTAATGAGAATGCAATAAGAGACAGTTCTATGATTGAAGCTGATGCAAAAAATTACAGAATTAGGCAGCTATGGTTGCCAATAGCTAGAAGAACAGTGCAATGGTTTGCCAATAGGGAACAAAGGTCTCGACTGTCAAAGTACACACAGCAGCCAGATGCATAGACAAAATGAATCTCAAGGGTTTGCTATCCTTGTTTAAAAATATAGTCATTTGATTCTTTTCTAATCATGTAAAATGGATCTTTTTGTTCTTTTTTCTCTTGGGTGTTGTTACAGAGGTGAGAGGCTGCTGTCTTCTAATCCAAAAGTTTGAGTTATTTTGGAGACTTTTCTTAAACATGAACCCAATTTAGTCATAA

Coding sequence (CDS)

ATGGGTAAGTTGAGTAGAATCATTATGATCATTTTGACTATTTTTCTTTTTCCTGTCATTGCACAAGCACCTTCTCCACCAAAAGCTGGTTCTGGTATTCCACAAAATTTCACCATTGTTATTGGAATCCTCTCCATCATGTTCTCCATGGTCTTCATCCTTGTTGTTTATGCAAAATTCTGTCACCCGACTTCCCATTTTCGTGGCGAACCCCAAGCTCATCTCGGGCATGGACTTCTCAGATCAGACTCAAGATTTTCTGGGGTTGATCAAAAGGTGATTGATGCACTTCCTTTCTTTAGATTCTCATCACTCAAAGGATCAAGGGAAGGGCTGGAATGTGCTGTTTGCTTATCCAAATTTGAGGAAATTGAAGTCCTTCGGTTGCTACCAAAATGCAAGCATGCCTTTCACATTGGCTGTATTGACCATTGGCTCGAAAAGCACTCGAGCTGTCCCATTTGTCGGTGTAGAATAAGTGTCGAGGACGTTGCATTCTTTAAATCTAACAGTATAAGACTAATGAGGAACAACAGCCAGCCAGAGCTGCCACAAGATTCATACATGGAGCTCTTTGTGCAGAGAGAGGAAAATCATCATAACTCTTCCAGGTCCAACAATGGAACCAGCTTCAGGAAAATAGGAAAAGAAATGCTTGGGGCCATGTCTAGCAATAGATTCTCTTCTTTGGATTCAGAAAGCATTCGCGGATCAGCAACAAGAGAAAGAGAAGGCAAAAGGACTTTACAAATTAAGGAAGAAATGGAAATGAAGAGATCATTTGAGAGAAGGATAAGCATAGCTGAGAAAAATAGCTTAGTTTCAATCTCAGGTATTTCCTCTACATCAGATTCTAATTCAAGTACATCAAGGACAACAAATCTTAATGAAAGATCTGTCTCAGACACCACTGCTTTTTCAAGATTTGGTTATTTTAATGAGAATGCAATAAGAGACAGTTCTATGATTGAAGCTGATGCAAAAAATTACAGAATTAGGCAGCTATGGTTGCCAATAGCTAGAAGAACAGTGCAATGGTTTGCCAATAGGGAACAAAGGTCTCGACTGTCAAAGTACACACAGCAGCCAGATGCATAG

Protein sequence

MGKLSRIIMIILTIFLFPVIAQAPSPPKAGSGIPQNFTIVIGILSIMFSMVFILVVYAKFCHPTSHFRGEPQAHLGHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSKFEEIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFKSNSIRLMRNNSQPELPQDSYMELFVQREENHHNSSRSNNGTSFRKIGKEMLGAMSSNRFSSLDSESIRGSATREREGKRTLQIKEEMEMKRSFERRISIAEKNSLVSISGISSTSDSNSSTSRTTNLNERSVSDTTAFSRFGYFNENAIRDSSMIEADAKNYRIRQLWLPIARRTVQWFANREQRSRLSKYTQQPDA

Homology

[Close]

BLAST of PI0029064 vs. ExPASy Swiss-Prot
Match: Q5XF85 (E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana OX=3702 GN=ATL42 PE=1 SV=2)

HSP 1 Score: 218.8 bits (556), Expect = 1.0e-55
Identity = 166/446 (37.22%), Postives = 233/446 (52.24%), Query Frame = 0


Query: 9   MIILTIFLFPVI-----AQAPSPPKAG---SGIPQNFTIVIGILSIMFSMVFILVVYAKF 68
           M  +  F  P++     AQ P P + G   +    +  +V G+L+IMF++ F+L+VYAK 
Sbjct: 1   MYQIFFFFLPLLHSYASAQTPPPFRNGDLVANFEPSLAVVTGVLAIMFALTFVLLVYAKC 60

Query: 69  CH----PTSHFRGEPQAHLGHGLL-----RSDSRFSGVDQKVIDALPFFRFSSLKGSREG 128
           CH      S  R      L  G+       S  RFSG+D+  I++LP FRFS+LKGS++G
Sbjct: 61  CHIDLRSGSGDRRRHDRRLRQGIFFNRSTASSDRFSGLDKTAIESLPLFRFSALKGSKQG 120

Query: 129 LECAVCLSKFEEIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVED--VAFFKS 188
           L+C+VCLSKFE +E+LRLLPKC+HAFHIGCID WLE+H++CP+CR R+S+E+        
Sbjct: 121 LDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEEDSSVLTNG 180

Query: 189 NSIRLMRNNSQPELPQDSYMELFVQREENHH--------NSSRSNNGTSFRKIGK----- 248
           NS R +   +Q E+ +DS +EL+++REE            SSR + G SFRKI K     
Sbjct: 181 NSFRFL---NQSEIREDSSLELYIEREEEEERIHREELSGSSRFSIGESFRKILKLGNKE 240

Query: 249 ------------------------------------------------EMLGAMSSNRFS 308
                                                           EM+ ++SS RFS
Sbjct: 241 KTLLDEHVNDKDEKKLMHKFNHRIVVSDVVFKNRWSNVSSSDLMFLNSEMVNSISSERFS 300

Query: 309 SLDSESIRGSATREREGKRTLQIKEEMEMKRSFERRISIAEKNSLVSISGISSTSDSNS- 365
           SLD    RG    E +    L+IKEEME KR  E        N L S++ + S+ + +S 
Sbjct: 301 SLDHVK-RGD---EEDQIGILRIKEEMEAKRMLE--------NKLTSMTTMFSSENGDSG 360

[Close]

BLAST of PI0029064 vs. ExPASy Swiss-Prot
Match: Q9SL78 (Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana OX=3702 GN=ATL12 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 6.9e-52
Identity = 148/403 (36.72%), Postives = 209/403 (51.86%), Query Frame = 0


Query: 8   IMIILTIFLFPVIAQAPSPPK---AGSGIPQNFTIVIGILSIMFSMVFILVVYAKFCH-- 67
           I+    IFL  V AQ+P PP           +  I+ G+ SI+F++ F+L+VYAK  H  
Sbjct: 9   ILFFFIIFLDYVSAQSPPPPNLYATSDLFKPSLAIITGVFSIVFTLTFVLLVYAKCFHND 68

Query: 68  --PTSHFRGEPQAH--LGHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCL 127
               +   GE   H  L  GL    SRFSG+D+K I++LPFFRFS+LKG ++GLEC+VCL
Sbjct: 69  LRSETDSDGERIRHDRLWQGLFNRSSRFSGLDKKAIESLPFFRFSALKGLKQGLECSVCL 128

Query: 128 SKFEEIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFKSNSIRLMRNN 187
           SKFE++E+LRLLPKC+HAFHIGCID WLE+H++CP+CR R+++ED      NS   +R  
Sbjct: 129 SKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIEDDLSVLGNSSTSLRIL 188

Query: 188 SQPEL-PQDSYMELFVQREENHHNSSRSNNGTSFRKIGKEMLGAMSSNRFSSLDSESIRG 247
           +Q E   +DS +E++++REE  ++   S+  +SFRKI                    ++ 
Sbjct: 189 NQSETREEDSRLEIYIEREEGTNDG--SSRFSSFRKI--------------------LKK 248

Query: 248 SATREREGKRTLQIKEEMEMKRSFERRISIAE---KNSLVSISGI-----------SSTS 307
           S   EREG   +   +E ++   F  RI +++   KN   +I+             S +S
Sbjct: 249 SLLLEREGNENI---DEKKLMHKFNHRIVVSDAVFKNRWSNITSSDLTFLTSEMLNSVSS 308

Query: 308 DSNSSTSRTTNLN--------------------ERSVSDTTAFSR-----FGYFNENAIR 362
           D  SS  R    N                     R+VS+ T  SR       Y    A  
Sbjct: 309 DRFSSVDRVHRGNLRDKEDMEMKRMLIKHKDSSRRTVSEITTVSREKAVGGSYRGSTAST 368

[Close]

BLAST of PI0029064 vs. ExPASy Swiss-Prot
Match: Q5EAE9 (RING-H2 finger protein ATL43 OS=Arabidopsis thaliana OX=3702 GN=ATL43 PE=2 SV=2)

HSP 1 Score: 134.4 bits (337), Expect = 2.6e-30
Identity = 99/304 (32.57%), Postives = 150/304 (49.34%), Query Frame = 0


Query: 10  IILTIFLFPVIAQAPSPP---KAGSGIPQNFTIVIGILSIMFSMVFILVVYAKFC--HPT 69
           +++T    P     PSPP      S +     +VI +L+  FS+ F+L++Y K C     
Sbjct: 28  VVITTSDTPPPLPPPSPPPRHNFTSSLMPGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNG 87

Query: 70  SHFRGEPQ---------AHLGHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECA 129
           S +   PQ          +   G +    + SG+D+ VI++LP FRF +L G ++GLECA
Sbjct: 88  SVYVNHPQRFAITRYGGGYYNGGGVVGGRKNSGIDRSVIESLPVFRFGALSGHKDGLECA 147

Query: 130 VCLSKFEEIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFF-------- 189
           VCL++FE  EVLRLLPKCKHAFH+ C+D WL+ HS+CP+CR R+  ED+           
Sbjct: 148 VCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLIGDCNSWFE 207

Query: 190 ------KSNSIRLMRNNSQPELPQ-----------DSYMELFVQREENHHNSSRSNNGTS 249
                 +SNS+    NN+ P L +            S  E   +  E   +SS  +N  S
Sbjct: 208 LQFSKDESNSV----NNNPPGLTRFIPVSRISGRHSSAGERASRLNEIRTSSSYKSNPMS 267

Query: 250 FRKIGKEMLGAMSSNRFSSLDSESIRGSA---TREREGKRTLQIKEEMEMKRSFERRISI 272
           FR   + +  ++  N      SES+  +     + ++G   +  +E  E +  FE RI I
Sbjct: 268 FR---RSLDSSLKVNDAGEEKSESVAVNCLDRLQRKDGLLLIPNRESFEGR--FEHRIII 322

[Close]

BLAST of PI0029064 vs. ExPASy Swiss-Prot
Match: Q8W571 (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3)

HSP 1 Score: 108.2 bits (269), Expect = 2.0e-22
Identity = 55/146 (37.67%), Postives = 85/146 (58.22%), Query Frame = 0


Query: 23  APSPPKAGSGIPQNFTIVIGILSIMFSMVFILVVYAKFCHPTSHFRGEPQAHLGHGLLRS 82
           +PSPP   +G   + T V  +L  +F +  +L VY + C      R  P +   +   R+
Sbjct: 32  SPSPPDLQTGHTPSKTTVFAVLVTLFFLTGLLSVYIRHC-----ARSNPDSSTRYFRNRA 91

Query: 83  D---SRFSGVDQKVIDALPFFRFSSLKGSREG---LECAVCLSKFEEIEVLRLLPKCKHA 142
           +   SR  G+D  V+++ P F +SS+K S+ G   LECA+CL++ E+ E +RLLP C H 
Sbjct: 92  NDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHL 151

Query: 143 FHIGCIDHWLEKHSSCPICRCRISVE 163
           FHI CID WL  H++CP+CR  ++ +
Sbjct: 152 FHIDCIDTWLYSHATCPVCRSNLTAK 172

[Close]

BLAST of PI0029064 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.8e-21
Identity = 52/128 (40.62%), Postives = 77/128 (60.16%), Query Frame = 0


Query: 40  VIGILSIMFSMVFILVVYAKFC---HPTSHFRGEPQAHLGHGLLRSDSRFS----GVDQK 99
           +IGIL+    +V    + +K+C   H TS        H G G   S  R S    G+++ 
Sbjct: 61  LIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLNES 120

Query: 100 VIDALPFFRFSSLKGSREGLECAVCLSKFEEIEVLRLLPKCKHAFHIGCIDHWLEKHSSC 159
           +I ++  +++ S  G  +G +C+VCLS+FEE E LRLLPKC HAFH+ CID WL+ HS+C
Sbjct: 121 MIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNC 180

Query: 160 PICRCRIS 161
           P+CR  ++
Sbjct: 181 PLCRAFVT 188

[Close]

BLAST of PI0029064 vs. ExPASy TrEMBL
Match: A0A1S3CHH4 (E3 ubiquitin-protein ligase ATL42-like OS=Cucumis melo OX=3656 GN=LOC103500996 PE=4 SV=1)

HSP 1 Score: 660.6 bits (1703), Expect = 3.8e-186
Identity = 342/365 (93.70%), Postives = 356/365 (97.53%), Query Frame = 0


Query: 1   MGKLSRIIMIILTIFLFPVIAQAPSPPKAGSGIPQNFTIVIGILSIMFSMVFILVVYAKF 60
           MG+ +RIIMIIL IFLFPVIAQAPSPPKAGS IPQNFTIVIGILSIMFSMVFILVVYAKF
Sbjct: 1   MGRFNRIIMIILIIFLFPVIAQAPSPPKAGSVIPQNFTIVIGILSIMFSMVFILVVYAKF 60

Query: 61  CHPTSHFRGEPQAHLGHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSK 120
           CHPTSHFRGEPQA+L HGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSK
Sbjct: 61  CHPTSHFRGEPQANLRHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSK 120

Query: 121 FEEIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFKSNSIRLMRNNSQ 180
           FE+IEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFKSNSIRL+RNNSQ
Sbjct: 121 FEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFKSNSIRLIRNNSQ 180

Query: 181 PELPQDSYMELFVQREENHHNSSRSNNGTSFRKIGKEMLGAMSSNRFSSLDSESIRGSAT 240
           P+LPQDS+MELFV REENHH SSRSN+GTSFRKIGKEMLGAMSS+RFSSL+SESIR SAT
Sbjct: 181 PDLPQDSHMELFVLREENHHYSSRSNDGTSFRKIGKEMLGAMSSSRFSSLESESIRRSAT 240

Query: 241 REREGKRTLQIKEEMEMKRSFERRISIAEKNSLVSISGISSTSDSNSSTSRTTNLNERSV 300
           REREGKRT QIKE MEMKRSFERRISIAEKNSLVSISGISSTSDSN+STS+TTNLNERSV
Sbjct: 241 REREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSV 300

Query: 301 SDTTAFSRFGYFNENAIRDSSMIEADAKNYRIRQLWLPIARRTVQWFANREQRSRLSKYT 360
           SDTTAFSRFGYFNENAIRDSSMIEADAK+YRIRQLWLPIARRTVQWFANRE+RSRLSKYT
Sbjct: 301 SDTTAFSRFGYFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYT 360

Query: 361 QQPDA 366
           QQPDA
Sbjct: 361 QQPDA 365

[Close]

BLAST of PI0029064 vs. ExPASy TrEMBL
Match: A0A5D3DZA7 (E3 ubiquitin-protein ligase ATL42-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G00780 PE=4 SV=1)

HSP 1 Score: 651.4 bits (1679), Expect = 2.3e-183
Identity = 342/378 (90.48%), Postives = 356/378 (94.18%), Query Frame = 0


Query: 1   MGKLSRIIMIILTIFLFPVIAQAPSPPKAGSGIPQNFTIVIGILSIMFSMVFILVVYAKF 60
           MG+ +RIIMIIL IFLFPVIAQAPSPPKAGS IPQNFTIVIGILSIMFSMVFILVVYAKF
Sbjct: 1   MGRFNRIIMIILIIFLFPVIAQAPSPPKAGSVIPQNFTIVIGILSIMFSMVFILVVYAKF 60

Query: 61  CHPTSHFRGEPQAHLGHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSK 120
           CHPTSHFRGEPQA+L HGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSK
Sbjct: 61  CHPTSHFRGEPQANLRHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSK 120

Query: 121 FEEIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFKSNSIRLMRNNSQ 180
           FE+IEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFKSNSIRL+RNNSQ
Sbjct: 121 FEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFKSNSIRLIRNNSQ 180

Query: 181 PELPQDSYMELFVQREENHHNSSRSNNGTSFRKIGK-------------EMLGAMSSNRF 240
           P+LPQDS+MELFV REENHH SSRSN+GTSFRKIGK             EMLGAMSS+RF
Sbjct: 181 PDLPQDSHMELFVLREENHHYSSRSNDGTSFRKIGKGSKEKEVLIESEAEMLGAMSSSRF 240

Query: 241 SSLDSESIRGSATREREGKRTLQIKEEMEMKRSFERRISIAEKNSLVSISGISSTSDSNS 300
           SSL+SESIR SATREREGKRT QIKE MEMKRSFERRISIAEKNSLVSISGISSTSDSN+
Sbjct: 241 SSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNA 300

Query: 301 STSRTTNLNERSVSDTTAFSRFGYFNENAIRDSSMIEADAKNYRIRQLWLPIARRTVQWF 360
           STS+TTNLNERSVSDTTAFSRFGYFNENAIRDSSMIEADAK+YRIRQLWLPIARRTVQWF
Sbjct: 301 STSKTTNLNERSVSDTTAFSRFGYFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWF 360

Query: 361 ANREQRSRLSKYTQQPDA 366
           ANRE+RSRLSKYTQQPDA
Sbjct: 361 ANREERSRLSKYTQQPDA 378

[Close]

BLAST of PI0029064 vs. ExPASy TrEMBL
Match: A0A6J1CUV0 (E3 ubiquitin-protein ligase ATL42-like OS=Momordica charantia OX=3673 GN=LOC111014428 PE=4 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 1.2e-139
Identity = 285/416 (68.51%), Postives = 319/416 (76.68%), Query Frame = 0


Query: 1   MGKLSRIIMIILTIFLFPVIAQAPSPPKAGSGIPQNFTIVIGILSIMFSMVFILVVYAKF 60
           M K SRII+II    L    AQ  SPPKA SGIP+N T++IGI+SIM S+ FILV+YAKF
Sbjct: 1   MSKFSRIILIITATLLVHANAQV-SPPKADSGIPENLTMLIGIISIMLSLAFILVLYAKF 60

Query: 61  CHPTSHFRGEPQAHLGHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSK 120
           CH  S  RG P+AHLG GLLRSD RFSGVDQKVID+LPFFRFSSLKGSREGLECAVCLSK
Sbjct: 61  CHRNS--RG-PRAHLGVGLLRSDLRFSGVDQKVIDSLPFFRFSSLKGSREGLECAVCLSK 120

Query: 121 FEEIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFK-SNSIRLMRNNS 180
           FE+IEVLRLLPKCKHAFHIGC+DHWLE HSSCP+CRCRISVEDVAFF  SNS+RLMRNNS
Sbjct: 121 FEDIEVLRLLPKCKHAFHIGCVDHWLENHSSCPMCRCRISVEDVAFFTCSNSMRLMRNNS 180

Query: 181 QPELPQDSYMELFVQREENHHNSSRSNNGTSFRKIGK----------------------- 240
           Q ELPQD  MELFVQREE+HHNSSR N G+SF KIGK                       
Sbjct: 181 QSELPQDPNMELFVQREEDHHNSSRFNIGSSFGKIGKGSKEKDGARERQSEEHVVFHKHK 240

Query: 241 ---------------------------EMLGAMSSNRFSSLDSESIRGSATREREGKRTL 300
                                      EMLGAMSSNRFSSLD+++IR S T E E KR  
Sbjct: 241 HKILVSDFVFMNRWSNLSSSDLMFLNTEMLGAMSSNRFSSLDTDNIRRSETGETEDKRIS 300

Query: 301 QIKEEMEMKRSFERRISIAEKNSLVSISGISSTSDSNSSTSRTTNLNE-RSVSDTTAFSR 360
            IKEEMEMKRSFE RISIAEKN+L+SI+G+ S SDSN+STSRT NLNE RSVSDTTAFSR
Sbjct: 301 NIKEEMEMKRSFETRISIAEKNTLISITGMPSISDSNASTSRTINLNERRSVSDTTAFSR 360

Query: 361 FGYFNENAIRDSSMIEADAKNYRIRQLWLPIARRTVQWFANREQRSRLSKYTQQPD 365
           FG FNENAIR++S+IE++A++YRIR++WLPIARRTVQWFANRE R++LSKYTQQPD
Sbjct: 361 FGNFNENAIRETSVIESNAEDYRIRKIWLPIARRTVQWFANREHRAQLSKYTQQPD 412

[Close]

BLAST of PI0029064 vs. ExPASy TrEMBL
Match: A0A2N9GBZ7 (RING-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24653 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 9.3e-84
Identity = 198/417 (47.48%), Postives = 257/417 (61.63%), Query Frame = 0


Query: 7   IIMIILTIFLFPVIAQAPSPPKAGSGIPQNFTIVIGILSIMFSMVFILVVYAKFCHPTSH 66
           +++ +L  F F V AQ       GS  P + T+VIGILS+MFS+  +L+VYAKFCH    
Sbjct: 6   LLIFVLHFFFFHVKAQYTGD---GSASPGSLTVVIGILSLMFSLTILLLVYAKFCHRRGP 65

Query: 67  FRGEPQAHLGHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSKFEEIEV 126
              +PQ      L+RS SRFSG+D+ VI++LPFFRFSSLKGSR+GLECAVCLSKFE+ E+
Sbjct: 66  IHSDPQ---NFALIRSSSRFSGIDKTVIESLPFFRFSSLKGSRDGLECAVCLSKFEDTEI 125

Query: 127 LRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFK-SNSIRLMRNNSQPELPQ 186
           LRLLPKCKHAFHI CID+WLEKH+SCP+CR ++S ED + F  +NS+RL+   +Q EL Q
Sbjct: 126 LRLLPKCKHAFHIECIDNWLEKHASCPLCRHKVSAEDPSIFTYTNSMRLI---NQSELRQ 185

Query: 187 DSYMELFVQREENHHNSSRSNNGTSFRK-------------------------------- 246
           DS +ELFVQREE+HH SSR + G SFRK                                
Sbjct: 186 DSNIELFVQREEDHHGSSRFSIGNSFRKTEKGDKEENPLIQEEADNSFDENHIVLHKHNH 245

Query: 247 -----------------------IGKEMLGAMSSNRFSSLDSESIRGSATREREGKRTLQ 306
                                  +  EMLGA SS RF+S D  + + S  RE E    ++
Sbjct: 246 KIIVPDFVFKNRWSNLSSSDLMFLNSEMLGATSSYRFASFDLNNEQSSTARENE--HIVK 305

Query: 307 IKEEMEMKRSFERRISIAEKNSLVSISGISSTSDSNSSTSRTTN----LNERSVSDTTAF 363
           IKEEM+MKR FE ++S   K S VS  GI STSDS S+ S+T+        RS+S+ TA 
Sbjct: 306 IKEEMDMKRLFENKVSTLNKTSAVSFPGIPSTSDSTSNLSQTSRYMNPTERRSMSEITAL 365

[Close]

BLAST of PI0029064 vs. ExPASy TrEMBL
Match: A0A7N2KVY2 (RING-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 1.3e-82
Identity = 193/396 (48.74%), Postives = 248/396 (62.63%), Query Frame = 0


Query: 29  AGSGIPQNFTIVIGILSIMFSMVFILVVYAKFCHPTSHFRGEPQAHLGHGLLRSDSRFSG 88
           A   +  +  +VIGILSIMFS+ F+L+VYAKFCH       +PQ     G +RS SRFSG
Sbjct: 24  ASQPVQPSLAVVIGILSIMFSLTFLLLVYAKFCHRRGSIHSDPQ---NFGFIRSSSRFSG 83

Query: 89  VDQKVIDALPFFRFSSLKGSREGLECAVCLSKFEEIEVLRLLPKCKHAFHIGCIDHWLEK 148
           +D+ VI++LPFFRFSSLKG++EGLEC+VCLSKFE+ E+LRLLPKCKHAFHI CID+WL K
Sbjct: 84  IDKTVIESLPFFRFSSLKGTKEGLECSVCLSKFEDTEMLRLLPKCKHAFHIDCIDNWLIK 143

Query: 149 HSSCPICRCRISVEDVAFFK-SNSIRLMRNNSQPELPQDSYMELFVQREENHHNSSRSNN 208
           HSSCP+CR ++S ED   F  +NS+RLM   +Q EL QDS +ELFVQREE+HH SSR + 
Sbjct: 144 HSSCPLCRHKVSPEDPTIFTYTNSMRLM---NQSELRQDSNIELFVQREEDHHGSSRFSI 203

Query: 209 GTSFRK------------------------------------------------------ 268
           G+SFRK                                                      
Sbjct: 204 GSSFRKTEKGNTEEKPLIFQEEADNNDENNKVLHKHNHKIIVSDFIFNNRWSSVSSSDLM 263

Query: 269 -IGKEMLGAMSSNRFSSLDSESIRGSATREREGKRTLQIKEEMEMKRSFERRISIAEKNS 328
            +  E+L A SS RFSSLD  + + S  R  E    ++IKEEME+KRSFE ++S   K S
Sbjct: 264 FLNSELLSATSSYRFSSLDWNNEQSSTPRSLENGHIVKIKEEMELKRSFETKVSTLNKTS 323

Query: 329 LVSISGISSTSDSN---SSTSRTTNLNE-RSVSDTTAFSRFGYFN--ENAIRDSSMIEAD 363
            VS  G+ STSDS    S TSR  N  E RS+S+ TA SR+   +  +N IR+SS+IE +
Sbjct: 324 PVSFPGLPSTSDSTPNLSQTSRYMNPTERRSMSEITALSRYEDISGIKNRIRESSLIENN 383

[Close]

BLAST of PI0029064 vs. NCBI nr
Match: XP_008462696.1 (PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis melo])

HSP 1 Score: 660.6 bits (1703), Expect = 7.8e-186
Identity = 342/365 (93.70%), Postives = 356/365 (97.53%), Query Frame = 0


Query: 1   MGKLSRIIMIILTIFLFPVIAQAPSPPKAGSGIPQNFTIVIGILSIMFSMVFILVVYAKF 60
           MG+ +RIIMIIL IFLFPVIAQAPSPPKAGS IPQNFTIVIGILSIMFSMVFILVVYAKF
Sbjct: 1   MGRFNRIIMIILIIFLFPVIAQAPSPPKAGSVIPQNFTIVIGILSIMFSMVFILVVYAKF 60

Query: 61  CHPTSHFRGEPQAHLGHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSK 120
           CHPTSHFRGEPQA+L HGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSK
Sbjct: 61  CHPTSHFRGEPQANLRHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSK 120

Query: 121 FEEIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFKSNSIRLMRNNSQ 180
           FE+IEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFKSNSIRL+RNNSQ
Sbjct: 121 FEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFKSNSIRLIRNNSQ 180

Query: 181 PELPQDSYMELFVQREENHHNSSRSNNGTSFRKIGKEMLGAMSSNRFSSLDSESIRGSAT 240
           P+LPQDS+MELFV REENHH SSRSN+GTSFRKIGKEMLGAMSS+RFSSL+SESIR SAT
Sbjct: 181 PDLPQDSHMELFVLREENHHYSSRSNDGTSFRKIGKEMLGAMSSSRFSSLESESIRRSAT 240

Query: 241 REREGKRTLQIKEEMEMKRSFERRISIAEKNSLVSISGISSTSDSNSSTSRTTNLNERSV 300
           REREGKRT QIKE MEMKRSFERRISIAEKNSLVSISGISSTSDSN+STS+TTNLNERSV
Sbjct: 241 REREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSV 300

Query: 301 SDTTAFSRFGYFNENAIRDSSMIEADAKNYRIRQLWLPIARRTVQWFANREQRSRLSKYT 360
           SDTTAFSRFGYFNENAIRDSSMIEADAK+YRIRQLWLPIARRTVQWFANRE+RSRLSKYT
Sbjct: 301 SDTTAFSRFGYFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYT 360

Query: 361 QQPDA 366
           QQPDA
Sbjct: 361 QQPDA 365

[Close]

BLAST of PI0029064 vs. NCBI nr
Match: KAA0046520.1 (E3 ubiquitin-protein ligase ATL42-like [Cucumis melo var. makuwa] >TYK28739.1 E3 ubiquitin-protein ligase ATL42-like [Cucumis melo var. makuwa])

HSP 1 Score: 651.4 bits (1679), Expect = 4.7e-183
Identity = 342/378 (90.48%), Postives = 356/378 (94.18%), Query Frame = 0


Query: 1   MGKLSRIIMIILTIFLFPVIAQAPSPPKAGSGIPQNFTIVIGILSIMFSMVFILVVYAKF 60
           MG+ +RIIMIIL IFLFPVIAQAPSPPKAGS IPQNFTIVIGILSIMFSMVFILVVYAKF
Sbjct: 1   MGRFNRIIMIILIIFLFPVIAQAPSPPKAGSVIPQNFTIVIGILSIMFSMVFILVVYAKF 60

Query: 61  CHPTSHFRGEPQAHLGHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSK 120
           CHPTSHFRGEPQA+L HGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSK
Sbjct: 61  CHPTSHFRGEPQANLRHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSK 120

Query: 121 FEEIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFKSNSIRLMRNNSQ 180
           FE+IEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFKSNSIRL+RNNSQ
Sbjct: 121 FEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFKSNSIRLIRNNSQ 180

Query: 181 PELPQDSYMELFVQREENHHNSSRSNNGTSFRKIGK-------------EMLGAMSSNRF 240
           P+LPQDS+MELFV REENHH SSRSN+GTSFRKIGK             EMLGAMSS+RF
Sbjct: 181 PDLPQDSHMELFVLREENHHYSSRSNDGTSFRKIGKGSKEKEVLIESEAEMLGAMSSSRF 240

Query: 241 SSLDSESIRGSATREREGKRTLQIKEEMEMKRSFERRISIAEKNSLVSISGISSTSDSNS 300
           SSL+SESIR SATREREGKRT QIKE MEMKRSFERRISIAEKNSLVSISGISSTSDSN+
Sbjct: 241 SSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNA 300

Query: 301 STSRTTNLNERSVSDTTAFSRFGYFNENAIRDSSMIEADAKNYRIRQLWLPIARRTVQWF 360
           STS+TTNLNERSVSDTTAFSRFGYFNENAIRDSSMIEADAK+YRIRQLWLPIARRTVQWF
Sbjct: 301 STSKTTNLNERSVSDTTAFSRFGYFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWF 360

Query: 361 ANREQRSRLSKYTQQPDA 366
           ANRE+RSRLSKYTQQPDA
Sbjct: 361 ANREERSRLSKYTQQPDA 378

[Close]

BLAST of PI0029064 vs. NCBI nr
Match: XP_031738779.1 (putative RING-H2 finger protein ATL12 [Cucumis sativus] >KAE8652892.1 hypothetical protein Csa_022677 [Cucumis sativus])

HSP 1 Score: 627.9 bits (1618), Expect = 5.6e-176
Identity = 342/422 (81.04%), Postives = 352/422 (83.41%), Query Frame = 0


Query: 1   MGKLSRIIMIILTIFLFPVIAQAPSPPKAGSGIPQNFTIVIGILSIMFSMVFILVVYAKF 60
           MGK SRIIMIILTIFLFPVIAQAPSPPKAGSGIPQNFTIVIGILSIMFSMVFILVVYAKF
Sbjct: 1   MGKFSRIIMIILTIFLFPVIAQAPSPPKAGSGIPQNFTIVIGILSIMFSMVFILVVYAKF 60

Query: 61  CHPTSHFRGEPQAHLGHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSK 120
           CHPTSHFRGEPQAHLGHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLS 
Sbjct: 61  CHPTSHFRGEPQAHLGHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSN 120

Query: 121 FEEIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFKSNSIRLMRNNSQ 180
           FE+IEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRI VED+AFFKSNSIRL+RNNS+
Sbjct: 121 FEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRIGVEDIAFFKSNSIRLIRNNSR 180

Query: 181 PELPQDSYMELFVQREENHHNSSRSNNGTSFRKIGK------------------------ 240
            ELPQDS +ELFVQREENHHNSSRSNNGTSFR IGK                        
Sbjct: 181 SELPQDSRIELFVQREENHHNSSRSNNGTSFRNIGKGNKEKEVLIENEAGECESEERVLF 240

Query: 241 -------------------------------EMLGAMSSNRFSSLDSESIRGSATREREG 300
                                          EMLG MSSNRFSSLDSESI  SATRE+EG
Sbjct: 241 HKHKHKILVSDFVFMNRWSNLSSSDLVFLNTEMLGVMSSNRFSSLDSESISQSATREKEG 300

Query: 301 KRTLQIKEEMEMKRSFERRISIAEKNSLVSISGISST-SDSNSSTSRTTNLNE-RSVSDT 360
           K+T QIKEEMEMKRSFERRISIAEKNSLVSISGISST SDSN+STSRTT LNE RSVSDT
Sbjct: 301 KKTSQIKEEMEMKRSFERRISIAEKNSLVSISGISSTSSDSNASTSRTTILNERRSVSDT 360

Query: 361 TAFSRFGYFNENAIRDSSMIEADAKNYRIRQLWLPIARRTVQWFANREQRSRLSKYTQQP 366
           TAFSRFGYFNENA RDSSMIEADAK++RIRQLWLPIARRTVQWFANREQR RLSKYTQQP
Sbjct: 361 TAFSRFGYFNENATRDSSMIEADAKSFRIRQLWLPIARRTVQWFANREQRFRLSKYTQQP 420

[Close]

BLAST of PI0029064 vs. NCBI nr
Match: XP_031742649.1 (E3 ubiquitin-protein ligase ATL42-like, partial [Cucumis sativus])

HSP 1 Score: 607.8 bits (1566), Expect = 6.0e-170
Identity = 329/408 (80.64%), Postives = 339/408 (83.09%), Query Frame = 0


Query: 15  FLFPVIAQAPSPPKAGSGIPQNFTIVIGILSIMFSMVFILVVYAKFCHPTSHFRGEPQAH 74
           F FPVIAQAPSPPKAGSGIPQNFTIVIGILSIMFSMVFILVVYAKFCHPTSHFRGEPQAH
Sbjct: 3   FFFPVIAQAPSPPKAGSGIPQNFTIVIGILSIMFSMVFILVVYAKFCHPTSHFRGEPQAH 62

Query: 75  LGHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSKFEEIEVLRLLPKCK 134
           LGHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSKFE+IEVLRLLPKCK
Sbjct: 63  LGHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSKFEDIEVLRLLPKCK 122

Query: 135 HAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFKSNSIRLMRNNSQPELPQDSYMELFVQ 194
           HAFHIGCIDHWLEKHSSCPICRCRI VED+AFFKSNSIRL+RNNS+PELPQDS +ELFVQ
Sbjct: 123 HAFHIGCIDHWLEKHSSCPICRCRIGVEDIAFFKSNSIRLIRNNSRPELPQDSRIELFVQ 182

Query: 195 REENHHNSSRSNNGTSFRKIGK-------------------------------------- 254
           REENHHNSSRSNNGTSFR IGK                                      
Sbjct: 183 REENHHNSSRSNNGTSFRNIGKGNKEKEVLIENEAGECESEERVLFHKHKHKILVSDFVF 242

Query: 255 -----------------EMLGAMSSNRFSSLDSESIRGSATREREGKRTLQIKEEMEMKR 314
                            EMLG MSSNRFSSLDSESI  SATRE+EGK+T QIKEEMEMKR
Sbjct: 243 MNRWSNLSSSDLVFLNTEMLGVMSSNRFSSLDSESISQSATREKEGKKTSQIKEEMEMKR 302

Query: 315 SFERRISIAEKNSLVSISGISST-SDSNSSTSRTTNLNE-RSVSDTTAFSRFGYFNENAI 366
           SFERRISIAEKNSLVSISGISST SD N+STSRTT LNE RSVSDTTAFSRFGYFNENA 
Sbjct: 303 SFERRISIAEKNSLVSISGISSTSSDPNASTSRTTILNERRSVSDTTAFSRFGYFNENAT 362

[Close]

BLAST of PI0029064 vs. NCBI nr
Match: KAE8647036.1 (hypothetical protein Csa_023000 [Cucumis sativus])

HSP 1 Score: 548.1 bits (1411), Expect = 5.6e-152
Identity = 298/376 (79.26%), Postives = 308/376 (81.91%), Query Frame = 0


Query: 47  MFSMVFILVVYAKFCHPTSHFRGEPQAHLGHGLLRSDSRFSGVDQKVIDALPFFRFSSLK 106
           MFSMVFILVVYAKFCHPTSHFRGEPQAHLGHGLLRSDSRFSGVDQKVIDALPFFRFSSLK
Sbjct: 1   MFSMVFILVVYAKFCHPTSHFRGEPQAHLGHGLLRSDSRFSGVDQKVIDALPFFRFSSLK 60

Query: 107 GSREGLECAVCLSKFEEIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAF 166
           GSREGLECAVCLSKFE+IEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRI VED+AF
Sbjct: 61  GSREGLECAVCLSKFEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRIGVEDIAF 120

Query: 167 FKSNSIRLMRNNSQPELPQDSYMELFVQREENHHNSSRSNNGTSFRKIGK---------- 226
           FKSNSIRL+RNNS+PELPQDS +ELFVQREENHHNSSRSNNGTSFR IGK          
Sbjct: 121 FKSNSIRLIRNNSRPELPQDSRIELFVQREENHHNSSRSNNGTSFRNIGKGNKEKEVLIE 180

Query: 227 ---------------------------------------------EMLGAMSSNRFSSLD 286
                                                        EMLG MSSNRFSSLD
Sbjct: 181 NEAGECESEERVLFHKHKHKILVSDFVFMNRWSNLSSSDLVFLNTEMLGVMSSNRFSSLD 240

Query: 287 SESIRGSATREREGKRTLQIKEEMEMKRSFERRISIAEKNSLVSISGISST-SDSNSSTS 346
           SESI  SATRE+EGK+T QIKEEMEMKRSFERRISIAEKNSLVSISGISST SD N+STS
Sbjct: 241 SESISQSATREKEGKKTSQIKEEMEMKRSFERRISIAEKNSLVSISGISSTSSDPNASTS 300

Query: 347 RTTNLNE-RSVSDTTAFSRFGYFNENAIRDSSMIEADAKNYRIRQLWLPIARRTVQWFAN 366
           RTT LNE RSVSDTTAFSRFGYFNENA RDSSMIEADAK++RIRQLWLPIARRTVQWFAN
Sbjct: 301 RTTILNERRSVSDTTAFSRFGYFNENATRDSSMIEADAKSFRIRQLWLPIARRTVQWFAN 360

[Close]

BLAST of PI0029064 vs. TAIR 10
Match: AT4G28890.1 (RING/U-box superfamily protein )

HSP 1 Score: 218.8 bits (556), Expect = 7.3e-57
Identity = 166/446 (37.22%), Postives = 233/446 (52.24%), Query Frame = 0


Query: 9   MIILTIFLFPVI-----AQAPSPPKAG---SGIPQNFTIVIGILSIMFSMVFILVVYAKF 68
           M  +  F  P++     AQ P P + G   +    +  +V G+L+IMF++ F+L+VYAK 
Sbjct: 1   MYQIFFFFLPLLHSYASAQTPPPFRNGDLVANFEPSLAVVTGVLAIMFALTFVLLVYAKC 60

Query: 69  CH----PTSHFRGEPQAHLGHGLL-----RSDSRFSGVDQKVIDALPFFRFSSLKGSREG 128
           CH      S  R      L  G+       S  RFSG+D+  I++LP FRFS+LKGS++G
Sbjct: 61  CHIDLRSGSGDRRRHDRRLRQGIFFNRSTASSDRFSGLDKTAIESLPLFRFSALKGSKQG 120

Query: 129 LECAVCLSKFEEIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVED--VAFFKS 188
           L+C+VCLSKFE +E+LRLLPKC+HAFHIGCID WLE+H++CP+CR R+S+E+        
Sbjct: 121 LDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEEDSSVLTNG 180

Query: 189 NSIRLMRNNSQPELPQDSYMELFVQREENHH--------NSSRSNNGTSFRKIGK----- 248
           NS R +   +Q E+ +DS +EL+++REE            SSR + G SFRKI K     
Sbjct: 181 NSFRFL---NQSEIREDSSLELYIEREEEEERIHREELSGSSRFSIGESFRKILKLGNKE 240

Query: 249 ------------------------------------------------EMLGAMSSNRFS 308
                                                           EM+ ++SS RFS
Sbjct: 241 KTLLDEHVNDKDEKKLMHKFNHRIVVSDVVFKNRWSNVSSSDLMFLNSEMVNSISSERFS 300

Query: 309 SLDSESIRGSATREREGKRTLQIKEEMEMKRSFERRISIAEKNSLVSISGISSTSDSNS- 365
           SLD    RG    E +    L+IKEEME KR  E        N L S++ + S+ + +S 
Sbjct: 301 SLDHVK-RGD---EEDQIGILRIKEEMEAKRMLE--------NKLTSMTTMFSSENGDSG 360

[Close]

BLAST of PI0029064 vs. TAIR 10
Match: AT2G20030.1 (RING/U-box superfamily protein )

HSP 1 Score: 206.1 bits (523), Expect = 4.9e-53
Identity = 148/403 (36.72%), Postives = 209/403 (51.86%), Query Frame = 0


Query: 8   IMIILTIFLFPVIAQAPSPPK---AGSGIPQNFTIVIGILSIMFSMVFILVVYAKFCH-- 67
           I+    IFL  V AQ+P PP           +  I+ G+ SI+F++ F+L+VYAK  H  
Sbjct: 9   ILFFFIIFLDYVSAQSPPPPNLYATSDLFKPSLAIITGVFSIVFTLTFVLLVYAKCFHND 68

Query: 68  --PTSHFRGEPQAH--LGHGLLRSDSRFSGVDQKVIDALPFFRFSSLKGSREGLECAVCL 127
               +   GE   H  L  GL    SRFSG+D+K I++LPFFRFS+LKG ++GLEC+VCL
Sbjct: 69  LRSETDSDGERIRHDRLWQGLFNRSSRFSGLDKKAIESLPFFRFSALKGLKQGLECSVCL 128

Query: 128 SKFEEIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRISVEDVAFFKSNSIRLMRNN 187
           SKFE++E+LRLLPKC+HAFHIGCID WLE+H++CP+CR R+++ED      NS   +R  
Sbjct: 129 SKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIEDDLSVLGNSSTSLRIL 188

Query: 188 SQPEL-PQDSYMELFVQREENHHNSSRSNNGTSFRKIGKEMLGAMSSNRFSSLDSESIRG 247
           +Q E   +DS +E++++REE  ++   S+  +SFRKI                    ++ 
Sbjct: 189 NQSETREEDSRLEIYIEREEGTNDG--SSRFSSFRKI--------------------LKK 248

Query: 248 SATREREGKRTLQIKEEMEMKRSFERRISIAE---KNSLVSISGI-----------SSTS 307
           S   EREG   +   +E ++   F  RI +++   KN   +I+             S +S
Sbjct: 249 SLLLEREGNENI---DEKKLMHKFNHRIVVSDAVFKNRWSNITSSDLTFLTSEMLNSVSS 308

Query: 308 DSNSSTSRTTNLN--------------------ERSVSDTTAFSR-----FGYFNENAIR 362
           D  SS  R    N                     R+VS+ T  SR       Y    A  
Sbjct: 309 DRFSSVDRVHRGNLRDKEDMEMKRMLIKHKDSSRRTVSEITTVSREKAVGGSYRGSTAST 368

[Close]

BLAST of PI0029064 vs. TAIR 10
Match: AT5G05810.1 (RING/U-box superfamily protein )

HSP 1 Score: 129.8 bits (325), Expect = 4.5e-30
Identity = 92/272 (33.82%), Postives = 139/272 (51.10%), Query Frame = 0


Query: 39  IVIGILSIMFSMVFILVVYAKFC--HPTSHFRGEPQ---------AHLGHGLLRSDSRFS 98
           +VI +L+  FS+ F+L++Y K C     S +   PQ          +   G +    + S
Sbjct: 6   VVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGGGVVGGRKNS 65

Query: 99  GVDQKVIDALPFFRFSSLKGSREGLECAVCLSKFEEIEVLRLLPKCKHAFHIGCIDHWLE 158
           G+D+ VI++LP FRF +L G ++GLECAVCL++FE  EVLRLLPKCKHAFH+ C+D WL+
Sbjct: 66  GIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLD 125

Query: 159 KHSSCPICRCRISVEDVAFF--------------KSNSIRLMRNNSQPELPQ-------- 218
            HS+CP+CR R+  ED+                 +SNS+    NN+ P L +        
Sbjct: 126 AHSTCPLCRYRVDPEDILLIGDCNSWFELQFSKDESNSV----NNNPPGLTRFIPVSRIS 185

Query: 219 ---DSYMELFVQREENHHNSSRSNNGTSFRKIGKEMLGAMSSNRFSSLDSESIRGSA--- 272
               S  E   +  E   +SS  +N  SFR   + +  ++  N      SES+  +    
Sbjct: 186 GRHSSAGERASRLNEIRTSSSYKSNPMSFR---RSLDSSLKVNDAGEEKSESVAVNCLDR 245

[Close]

BLAST of PI0029064 vs. TAIR 10
Match: AT4G40070.1 (RING/U-box superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-23
Identity = 55/146 (37.67%), Postives = 85/146 (58.22%), Query Frame = 0


Query: 23  APSPPKAGSGIPQNFTIVIGILSIMFSMVFILVVYAKFCHPTSHFRGEPQAHLGHGLLRS 82
           +PSPP   +G   + T V  +L  +F +  +L VY + C      R  P +   +   R+
Sbjct: 32  SPSPPDLQTGHTPSKTTVFAVLVTLFFLTGLLSVYIRHC-----ARSNPDSSTRYFRNRA 91

Query: 83  D---SRFSGVDQKVIDALPFFRFSSLKGSREG---LECAVCLSKFEEIEVLRLLPKCKHA 142
           +   SR  G+D  V+++ P F +SS+K S+ G   LECA+CL++ E+ E +RLLP C H 
Sbjct: 92  NDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHL 151

Query: 143 FHIGCIDHWLEKHSSCPICRCRISVE 163
           FHI CID WL  H++CP+CR  ++ +
Sbjct: 152 FHIDCIDTWLYSHATCPVCRSNLTAK 172

[Close]

BLAST of PI0029064 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 2.0e-22
Identity = 52/128 (40.62%), Postives = 77/128 (60.16%), Query Frame = 0


Query: 40  VIGILSIMFSMVFILVVYAKFC---HPTSHFRGEPQAHLGHGLLRSDSRFS----GVDQK 99
           +IGIL+    +V    + +K+C   H TS        H G G   S  R S    G+++ 
Sbjct: 61  LIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLNES 120

Query: 100 VIDALPFFRFSSLKGSREGLECAVCLSKFEEIEVLRLLPKCKHAFHIGCIDHWLEKHSSC 159
           +I ++  +++ S  G  +G +C+VCLS+FEE E LRLLPKC HAFH+ CID WL+ HS+C
Sbjct: 121 MIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNC 180

Query: 160 PICRCRIS 161
           P+CR  ++
Sbjct: 181 PLCRAFVT 188

The following BLAST results are available for this feature:

BLAST of PI0029064 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XF85	1.0e-55	37.22	E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana OX=3702 GN=ATL42 PE=1 ...	[more]
Q9SL78	6.9e-52	36.72	Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana OX=3702 GN=ATL12 P...	[more]
Q5EAE9	2.6e-30	32.57	RING-H2 finger protein ATL43 OS=Arabidopsis thaliana OX=3702 GN=ATL43 PE=2 SV=2	[more]
Q8W571	2.0e-22	37.67	RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3	[more]
Q9LF64	2.8e-21	40.63	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]

BLAST of PI0029064 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CHH4	3.8e-186	93.70	E3 ubiquitin-protein ligase ATL42-like OS=Cucumis melo OX=3656 GN=LOC103500996 P...	[more]
A0A5D3DZA7	2.3e-183	90.48	E3 ubiquitin-protein ligase ATL42-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1CUV0	1.2e-139	68.51	E3 ubiquitin-protein ligase ATL42-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A2N9GBZ7	9.3e-84	47.48	RING-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2465...	[more]
A0A7N2KVY2	1.3e-82	48.74	RING-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of PI0029064 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462696.1	7.8e-186	93.70	PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis melo]	[more]
KAA0046520.1	4.7e-183	90.48	E3 ubiquitin-protein ligase ATL42-like [Cucumis melo var. makuwa] >TYK28739.1 E3...	[more]
XP_031738779.1	5.6e-176	81.04	putative RING-H2 finger protein ATL12 [Cucumis sativus] >KAE8652892.1 hypothetic...	[more]
XP_031742649.1	6.0e-170	80.64	E3 ubiquitin-protein ligase ATL42-like, partial [Cucumis sativus]	[more]
KAE8647036.1	5.6e-152	79.26	hypothetical protein Csa_023000 [Cucumis sativus]	[more]

BLAST of PI0029064 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28890.1	7.3e-57	37.22	RING/U-box superfamily protein	[more]
AT2G20030.1	4.9e-53	36.72	RING/U-box superfamily protein	[more]
AT5G05810.1	4.5e-30	33.82	RING/U-box superfamily protein	[more]
AT4G40070.1	1.4e-23	37.67	RING/U-box superfamily protein	[more]
AT5G17600.1	2.0e-22	40.63	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 251..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 277..298
None	No IPR available	PANTHER	PTHR46539	E3 UBIQUITIN-PROTEIN LIGASE ATL42	coord: 216..357
None	No IPR available	PANTHER	PTHR46539:SF1	E3 UBIQUITIN-PROTEIN LIGASE ATL42	coord: 31..215
None	No IPR available	PANTHER	PTHR46539	E3 UBIQUITIN-PROTEIN LIGASE ATL42	coord: 31..215
None	No IPR available	PANTHER	PTHR46539:SF1	E3 UBIQUITIN-PROTEIN LIGASE ATL42	coord: 216..357
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 113..156 e-value: 1.66152E-20 score: 81.5793
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 94..161
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 114..155 e-value: 6.7E-7 score: 38.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 113..156 e-value: 2.0E-12 score: 47.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 114..156 score: 12.445019
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 88..164 e-value: 1.2E-21 score: 77.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0029064.1	PI0029064.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane