PI0029062 (gene) Melon (PI 482460) v1

Overview


Name	PI0029062
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr01: 3579927 .. 3581217 (+)
RNA-Seq Expression	PI0029062
Synteny	PI0029062

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTTCTGTCTCATGTTCTTTCATTTTTCTTTGTTATTTTTCTTGTTAGATGGTCATAAGTTGCAACTTGAATCTATCAATGTTGAGATGCTTTGAAGAGGGAAGAAACTTATAGAATATTAAAACTTTAGGTGTTGGCGGAAAATCTCAGGTTTAGAAATCGGAGCCTTCATCTTCCTTTGATCTGGTAAATGCCCAAACCACACGAAATAATCCCCTTCTACGCCGCTCTCCTCGAATCATGCTCCTCCACCAAGAACCTCCACACTCTCAAGCAAATTCACGCTCTTACCATAAGACTTCAAATCTCTCACCACCATTTCATTCGAACCAAGCTCGCTTCAACCTACGCCGCCTGCGCCCAACTCCCACAAGCCACCACCATCTTCTCCTTCGCCACTCGCCGCCCCACCTACCTCTTCAATGCTCTCATCAGAGCCCACTCTTCTCTCCGTCTCTTCTCCCAATCCCTCTCCATTTTCCGCCAGATGCTCCTTTCTGGAAAATCCATTGATCGCCATACTTTCCCGCCGGTGCTCAAGTCATGTACCGGCCTCTCCTCCTTGAGCCTTGGCCGCCAGGTTCATGGGGCTCTTCTGATTAATGGCTTCTCTGCAGATTTGCCTAGTTTGAATGCTTTGATTACCATGTATGGCAAATGCGGGGATTTGGGTGTTGCACGGAAGGTGTTTGATGGAATGCCTGAGAGGAATGAGGTGTCGTGGTCGGCTTTGATGGCGGGTTATGGTGTTCATGGGATGTTTGGGGAGGTGTTTGGGTTGTTTGAGAGGATGGTGGAAGAAGGGCAAAAGCCGGATGAGCTCACTTTTACATCTCTTCTCACGGCGTGTAGCCATGGAGGGATGATTGAGAAAGGGAAGGAGTATTTTGGTATGATGAGAATGGAGTTTGATTTGAGGCCTGGGTTGCAACATTATACTTGCATGGTGGATTTGCTTGGGAGATTGGGGCAAGTGGAAGAAGCAGAGAAGTTGATAATGAAGATGGAGATGGAGCCTGATGAGGCTTTGTGGGGTGCCATGTTGAGTGCTTGTAGGATTCATGGGAAGGCCGATGTGGCTGATAGGGTGCAAAAACGGTTTATCAAACAACAATGAGTGTATAAACTATTGTGTAAGTTATGTTTGATAGTTGGTTTCATAAGTCTCCATTGATTCAATTTTAAAAAATTGGCCTTCGACATCCATTTGTCCAAAGAAACAGCACAAATTTGACTCGCTTACAGTCTAGAACAACTTTATGTATGAAATCAAGTGGTGTTAGTAATGCC

mRNA sequence

CGTTTCTGTCTCATGTTCTTTCATTTTTCTTTGTTATTTTTCTTGTTAGATGGTCATAAGTTGCAACTTGAATCTATCAATGTTGAGATGCTTTGAAGAGGGAAGAAACTTATAGAATATTAAAACTTTAGGTGTTGGCGGAAAATCTCAGGTTTAGAAATCGGAGCCTTCATCTTCCTTTGATCTGGTAAATGCCCAAACCACACGAAATAATCCCCTTCTACGCCGCTCTCCTCGAATCATGCTCCTCCACCAAGAACCTCCACACTCTCAAGCAAATTCACGCTCTTACCATAAGACTTCAAATCTCTCACCACCATTTCATTCGAACCAAGCTCGCTTCAACCTACGCCGCCTGCGCCCAACTCCCACAAGCCACCACCATCTTCTCCTTCGCCACTCGCCGCCCCACCTACCTCTTCAATGCTCTCATCAGAGCCCACTCTTCTCTCCGTCTCTTCTCCCAATCCCTCTCCATTTTCCGCCAGATGCTCCTTTCTGGAAAATCCATTGATCGCCATACTTTCCCGCCGGTGCTCAAGTCATGTACCGGCCTCTCCTCCTTGAGCCTTGGCCGCCAGGTTCATGGGGCTCTTCTGATTAATGGCTTCTCTGCAGATTTGCCTAGTTTGAATGCTTTGATTACCATGTATGGCAAATGCGGGGATTTGGGTGTTGCACGGAAGGTGTTTGATGGAATGCCTGAGAGGAATGAGGTGTCGTGGTCGGCTTTGATGGCGGGTTATGGTGTTCATGGGATGTTTGGGGAGGTGTTTGGGTTGTTTGAGAGGATGGTGGAAGAAGGGCAAAAGCCGGATGAGCTCACTTTTACATCTCTTCTCACGGCGTGTAGCCATGGAGGGATGATTGAGAAAGGGAAGGAGTATTTTGGTATGATGAGAATGGAGTTTGATTTGAGGCCTGGGTTGCAACATTATACTTGCATGGTGGATTTGCTTGGGAGATTGGGGCAAGTGGAAGAAGCAGAGAAGTTGATAATGAAGATGGAGATGGAGCCTGATGAGGCTTTGTGGGGTGCCATGTTGAGTGCTTGTAGGATTCATGGGAAGGCCGATGTGGCTGATAGGGTGCAAAAACGGTTTATCAAACAACAATGAGTGTATAAACTATTGTGTAAGTTATGTTTGATAGTTGGTTTCATAAGTCTCCATTGATTCAATTTTAAAAAATTGGCCTTCGACATCCATTTGTCCAAAGAAACAGCACAAATTTGACTCGCTTACAGTCTAGAACAACTTTATGTATGAAATCAAGTGGTGTTAGTAATGCC

Coding sequence (CDS)

ATGCCCAAACCACACGAAATAATCCCCTTCTACGCCGCTCTCCTCGAATCATGCTCCTCCACCAAGAACCTCCACACTCTCAAGCAAATTCACGCTCTTACCATAAGACTTCAAATCTCTCACCACCATTTCATTCGAACCAAGCTCGCTTCAACCTACGCCGCCTGCGCCCAACTCCCACAAGCCACCACCATCTTCTCCTTCGCCACTCGCCGCCCCACCTACCTCTTCAATGCTCTCATCAGAGCCCACTCTTCTCTCCGTCTCTTCTCCCAATCCCTCTCCATTTTCCGCCAGATGCTCCTTTCTGGAAAATCCATTGATCGCCATACTTTCCCGCCGGTGCTCAAGTCATGTACCGGCCTCTCCTCCTTGAGCCTTGGCCGCCAGGTTCATGGGGCTCTTCTGATTAATGGCTTCTCTGCAGATTTGCCTAGTTTGAATGCTTTGATTACCATGTATGGCAAATGCGGGGATTTGGGTGTTGCACGGAAGGTGTTTGATGGAATGCCTGAGAGGAATGAGGTGTCGTGGTCGGCTTTGATGGCGGGTTATGGTGTTCATGGGATGTTTGGGGAGGTGTTTGGGTTGTTTGAGAGGATGGTGGAAGAAGGGCAAAAGCCGGATGAGCTCACTTTTACATCTCTTCTCACGGCGTGTAGCCATGGAGGGATGATTGAGAAAGGGAAGGAGTATTTTGGTATGATGAGAATGGAGTTTGATTTGAGGCCTGGGTTGCAACATTATACTTGCATGGTGGATTTGCTTGGGAGATTGGGGCAAGTGGAAGAAGCAGAGAAGTTGATAATGAAGATGGAGATGGAGCCTGATGAGGCTTTGTGGGGTGCCATGTTGAGTGCTTGTAGGATTCATGGGAAGGCCGATGTGGCTGATAGGGTGCAAAAACGGTTTATCAAACAACAATGA

Protein sequence

MPKPHEIIPFYAALLESCSSTKNLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCTGLSSLSLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEFDLRPGLQHYTCMVDLLGRLGQVEEAEKLIMKMEMEPDEALWGAMLSACRIHGKADVADRVQKRFIKQQ

Homology

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BLAST of PI0029062 vs. ExPASy Swiss-Prot
Match: Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.5e-55
Identity = 111/299 (37.12%), Postives = 179/299 (59.87%), Query Frame = 0


Query: 11  YAALLESCSSTK----NLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLPQATTIF 70
           Y  +L++C +++    +L   K+IHA   R   S H +I T L   YA    +  A+ +F
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF 240

Query: 71  SFATRRPTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGK--SIDRHTFPPVLKSCTGLSS 130
                R    ++A+I  ++      ++L  FR+M+   K  S +  T   VL++C  L++
Sbjct: 241 GGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAA 300

Query: 131 LSLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAG 190
           L  G+ +HG +L  G  + LP ++AL+TMYG+CG L V ++VFD M +R+ VSW++L++ 
Sbjct: 301 LEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISS 360

Query: 191 YGVHGMFGEVFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEFDLRP 250
           YGVHG   +   +FE M+  G  P  +TF S+L ACSH G++E+GK  F  M  +  ++P
Sbjct: 361 YGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKP 420

Query: 251 GLQHYTCMVDLLGRLGQVEEAEKLIMKMEMEPDEALWGAMLSACRIHGKADVADRVQKR 304
            ++HY CMVDLLGR  +++EA K++  M  EP   +WG++L +CRIHG  ++A+R  +R
Sbjct: 421 QIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRR 479

[Close]

BLAST of PI0029062 vs. ExPASy Swiss-Prot
Match: Q9LND4 (Pentatricopeptide repeat-containing protein At1g06140, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E61 PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.6e-52
Identity = 101/296 (34.12%), Postives = 168/296 (56.76%), Query Frame = 0


Query: 14  LLESCSSTKNLHTLKQIHALTIRLQ-ISHHHFIRTKLASTYAACAQLPQATTIFSFATRR 73
           L+++C +       K +H ++IR   I    +++  +   Y  C  L  A  +F  +  R
Sbjct: 216 LVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDR 275

Query: 74  PTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCTGLSSLSLGRQVH 133
              ++  LI   +      ++  +FRQML      ++ T   +L SC+ L SL  G+ VH
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335

Query: 134 GALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFG 193
           G ++ NG   D  +  + I MY +CG++ +AR VFD MPERN +SWS+++  +G++G+F 
Sbjct: 336 GYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFE 395

Query: 194 EVFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEFDLRPGLQHYTCM 253
           E    F +M  +   P+ +TF SLL+ACSH G +++G + F  M  ++ + P  +HY CM
Sbjct: 396 EALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACM 455

Query: 254 VDLLGRLGQVEEAEKLIMKMEMEPDEALWGAMLSACRIHGKADVADRVQKRFIKQQ 309
           VDLLGR G++ EA+  I  M ++P  + WGA+LSACRIH + D+A  + ++ +  +
Sbjct: 456 VDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSME 511

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BLAST of PI0029062 vs. ExPASy Swiss-Prot
Match: Q9LIC3 (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H85 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.8e-52
Identity = 111/306 (36.27%), Postives = 172/306 (56.21%), Query Frame = 0


Query: 3   KPHEIIPFYAALLESCSSTKNLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLPQA 62
           KP+E    +A +L SC     L   KQIH L ++     H F+ + L   YA   Q+ +A
Sbjct: 150 KPNEFT--FATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEA 209

Query: 63  TTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCTGL 122
             IF     R      A+I  ++ L L  ++L +F ++   G S +  T+  +L + +GL
Sbjct: 210 REIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGL 269

Query: 123 SSLSLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALM 182
           + L  G+Q H  +L           N+LI MY KCG+L  AR++FD MPER  +SW+A++
Sbjct: 270 ALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAML 329

Query: 183 AGYGVHGMFGEVFGLFERMVEEGQ-KPDELTFTSLLTACSHGGMIEKGKEYF-GMMRMEF 242
            GY  HG+  EV  LF  M +E + KPD +T  ++L+ CSHG M + G   F GM+  E+
Sbjct: 330 VGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEY 389

Query: 243 DLRPGLQHYTCMVDLLGRLGQVEEAEKLIMKMEMEPDEALWGAMLSACRIHGKADVADRV 302
             +PG +HY C+VD+LGR G+++EA + I +M  +P   + G++L ACR+H   D+ + V
Sbjct: 390 GTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESV 449

Query: 303 QKRFIK 307
            +R I+
Sbjct: 450 GRRLIE 453

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BLAST of PI0029062 vs. ExPASy Swiss-Prot
Match: Q0WN60 (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)

HSP 1 Score: 204.1 bits (518), Expect = 2.2e-51
Identity = 102/295 (34.58%), Postives = 166/295 (56.27%), Query Frame = 0


Query: 13  ALLESCSSTKNLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLPQATTIFSFATRR 72
           +LL +CS  K+L   K++H   IR  +    F+   + S Y  C +L     +F     +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560

Query: 73  PTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCTGLSSLSLGRQVH 132
               +N +I  +       ++L +FRQM+L G  +   +  PV  +C+ L SL LGR+ H
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620

Query: 133 GALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFG 192
              L +    D     +LI MY K G +  + KVF+G+ E++  SW+A++ GYG+HG+  
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680

Query: 193 EVFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEFDLRPGLQHYTCM 252
           E   LFE M   G  PD+LTF  +LTAC+H G+I +G  Y   M+  F L+P L+HY C+
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 740

Query: 253 VDLLGRLGQVEEAEKLIM-KMEMEPDEALWGAMLSACRIHGKADVADRVQKRFIK 307
           +D+LGR GQ+++A +++  +M  E D  +W ++LS+CRIH   ++ ++V  +  +
Sbjct: 741 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFE 795

[Close]

BLAST of PI0029062 vs. ExPASy Swiss-Prot
Match: P93005 (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E19 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.9e-51
Identity = 106/283 (37.46%), Postives = 161/283 (56.89%), Query Frame = 0


Query: 14  LLESCSSTKNLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLPQATTIFSFATRRP 73
           +L +CS    L   KQ+H+  ++L    H F  T L   YA    L  A   F     R 
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERD 387

Query: 74  TYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCTGLSSLSLGRQVHG 133
             L+ +LI  +       ++L ++R+M  +G   +  T   VLK+C+ L++L LG+QVHG
Sbjct: 388 VALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHG 447

Query: 134 ALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGE 193
             + +GF  ++P  +AL TMY KCG L     VF   P ++ VSW+A+++G   +G   E
Sbjct: 448 HTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDE 507

Query: 194 VFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEFDLRPGLQHYTCMV 253
              LFE M+ EG +PD++TF ++++ACSH G +E+G  YF MM  +  L P + HY CMV
Sbjct: 508 ALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMV 567

Query: 254 DLLGRLGQVEEAEKLIMKMEMEPDEALWGAMLSACRIHGKADV 297
           DLL R GQ++EA++ I    ++    LW  +LSAC+ HGK ++
Sbjct: 568 DLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCEL 610

[Close]

BLAST of PI0029062 vs. ExPASy TrEMBL
Match: A0A0A0K1F7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041310 PE=4 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 5.3e-165
Identity = 292/308 (94.81%), Postives = 297/308 (96.43%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLESCSSTKNLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLP 60
           MPKPHEIIPFYAALL++CSST NLHTLKQIHALTI L ISHHHFIRTKLASTYAACAQLP
Sbjct: 1   MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60

Query: 61  QATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCT 120
           QATTIFSFATRRPTYLFN LIRAHSSLRLFSQSLSIFR MLLSGKSIDRHT PPVLKSCT
Sbjct: 61  QATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCT 120

Query: 121 GLSSLSLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSL LGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEF 240
           LMAGYGVHGMFGEVF LFERMVEEGQKPDELTFTSLLTACSHGG+IEKGKEYFGMMRMEF
Sbjct: 181 LMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEF 240

Query: 241 DLRPGLQHYTCMVDLLGRLGQVEEAEKLIMKMEMEPDEALWGAMLSACRIHGKADVADRV 300
            LRPGLQHYTCMVDLLGR GQVEEAEKLIM+ME+EPDEALWGAMLSACRIHGK DVADRV
Sbjct: 241 HLRPGLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRV 300

Query: 301 QKRFIKQQ 309
           QKRFIKQQ
Sbjct: 301 QKRFIKQQ 308

[Close]

BLAST of PI0029062 vs. ExPASy TrEMBL
Match: A0A5A7UT42 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold786G00080 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 1.9e-162
Identity = 289/308 (93.83%), Postives = 295/308 (95.78%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLESCSSTKNLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLP 60
           MPKPHEIIPFYAALLE+CSSTKNLHTLKQIHALTI L ISHHHFIRTKLASTYAACAQLP
Sbjct: 1   MPKPHEIIPFYAALLEACSSTKNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60

Query: 61  QATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCT 120
           QA TIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFR MLLSGKS DRHTFP VLKSCT
Sbjct: 61  QANTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSGKSTDRHTFPLVLKSCT 120

Query: 121 GLSSLSLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSL LGRQVHGALLINGFSADLPSLNALITMY KCGDLGVARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYSKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEF 240
           LMAGYGVHGMFGEVF LFERMV+EGQ+PDELTFTSLLTACSHGG+IEKGKEYF  MRMEF
Sbjct: 181 LMAGYGVHGMFGEVFRLFERMVKEGQRPDELTFTSLLTACSHGGLIEKGKEYFRTMRMEF 240

Query: 241 DLRPGLQHYTCMVDLLGRLGQVEEAEKLIMKMEMEPDEALWGAMLSACRIHGKADVADRV 300
            LRPGLQHYTCMVDLLGRLGQVEEAEKLIM+MEMEPDEALWGAMLSACRIHG+ DVADRV
Sbjct: 241 HLRPGLQHYTCMVDLLGRLGQVEEAEKLIMEMEMEPDEALWGAMLSACRIHGRVDVADRV 300

Query: 301 QKRFIKQQ 309
           QKRFIKQQ
Sbjct: 301 QKRFIKQQ 308

[Close]

BLAST of PI0029062 vs. ExPASy TrEMBL
Match: A0A1S3C0K0 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103495634 PE=4 SV=1)

HSP 1 Score: 578.9 bits (1491), Expect = 1.2e-161
Identity = 288/308 (93.51%), Postives = 294/308 (95.45%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLESCSSTKNLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLP 60
           MPKPHEIIPFYAALLE+CSSTKNLHTLKQIHALTI L ISHHHFIRTKLASTYAACAQLP
Sbjct: 1   MPKPHEIIPFYAALLEACSSTKNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60

Query: 61  QATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCT 120
           QA TIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFR MLLSGKS DRHTFP VLKSCT
Sbjct: 61  QANTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSGKSTDRHTFPLVLKSCT 120

Query: 121 GLSSLSLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSL LGRQVHGALLINGFSADLPSLNALITMY KCGDLGVARKVFDGMPERN VSWSA
Sbjct: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYSKCGDLGVARKVFDGMPERNGVSWSA 180

Query: 181 LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEF 240
           LMAGYGVHGMFGEVF LFERMV+EGQ+PDELTFTSLLTACSHGG+IEKGKEYF  MRMEF
Sbjct: 181 LMAGYGVHGMFGEVFRLFERMVKEGQRPDELTFTSLLTACSHGGLIEKGKEYFRTMRMEF 240

Query: 241 DLRPGLQHYTCMVDLLGRLGQVEEAEKLIMKMEMEPDEALWGAMLSACRIHGKADVADRV 300
            LRPGLQHYTCMVDLLGRLGQVEEAEKLIM+MEMEPDEALWGAMLSACRIHG+ DVADRV
Sbjct: 241 HLRPGLQHYTCMVDLLGRLGQVEEAEKLIMEMEMEPDEALWGAMLSACRIHGRVDVADRV 300

Query: 301 QKRFIKQQ 309
           QKRFIKQQ
Sbjct: 301 QKRFIKQQ 308

[Close]

BLAST of PI0029062 vs. ExPASy TrEMBL
Match: A0A6J1EHW3 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111434233 PE=4 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 3.8e-155
Identity = 272/307 (88.60%), Postives = 292/307 (95.11%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLESCSSTKNLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLP 60
           MPKP +IIPFYAALL++CSSTKN  TLKQIHALTIRL ISHH FIRTKLASTYAAC  LP
Sbjct: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60

Query: 61  QATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCT 120
           QATTIFSFATRRPT+LFNALIRAHSSLRLFSQSLSIFR+MLLSGK IDRHT PPV+KSCT
Sbjct: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRRMLLSGKPIDRHTLPPVIKSCT 120

Query: 121 GLSSLSLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSL LGRQVHGA++INGFS DLP+LNALITMYGKCGDLGVARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEF 240
           LMAGYGVHGMF EVFGLFERMVEEGQKPDELTFT+LLTACSHGG+IE+GKEYFGMM+M F
Sbjct: 181 LMAGYGVHGMFDEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMQMGF 240

Query: 241 DLRPGLQHYTCMVDLLGRLGQVEEAEKLIMKMEMEPDEALWGAMLSACRIHGKADVADRV 300
           DLRPGL+HYTCMVDLLGR+GQVEEAEKLIM+ME+EPDEALWGA+LSACRIHGK +VADRV
Sbjct: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKGEVADRV 300

Query: 301 QKRFIKQ 308
           Q RF+KQ
Sbjct: 301 QTRFMKQ 307

[Close]

BLAST of PI0029062 vs. ExPASy TrEMBL
Match: A0A6J1I7X0 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111471666 PE=4 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 8.5e-155
Identity = 273/309 (88.35%), Postives = 293/309 (94.82%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLESCSSTKNLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLP 60
           MPKP +IIPFYAALL++CSSTKN HTLKQIHALTIRL ISHH FIRTKLASTYAAC  LP
Sbjct: 1   MPKPQDIIPFYAALLQACSSTKNHHTLKQIHALTIRLGISHHDFIRTKLASTYAACDHLP 60

Query: 61  QATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCT 120
           QATTIFSFATRRPT+LFNALIRAHSSLRLFSQSLSIFR MLLSGK IDRHT PPVLKSCT
Sbjct: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVLKSCT 120

Query: 121 GLSSLSLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSL LGRQVHG ++INGFS DLP+LNALITMYGKCGDLG+ARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGFVVINGFSTDLPNLNALITMYGKCGDLGIARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEF 240
           LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFT+LLTACSHGG+IE+GKEYFGMM+M F
Sbjct: 181 LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMKMGF 240

Query: 241 DLRPGLQHYTCMVDLLGRLGQVEEAEKLIMKMEM--EPDEALWGAMLSACRIHGKADVAD 300
           +L+PGL+HYTCMVDLLGR+GQVEEAEKLIM+MEM  EPDEALWGA+LSACRIHGKA+VAD
Sbjct: 241 NLKPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEMEIEPDEALWGALLSACRIHGKAEVAD 300

Query: 301 RVQKRFIKQ 308
           RVQ RF+KQ
Sbjct: 301 RVQTRFMKQ 309

[Close]

BLAST of PI0029062 vs. NCBI nr
Match: XP_004144516.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucumis sativus] >KGN43485.1 hypothetical protein Csa_020556 [Cucumis sativus])

HSP 1 Score: 590.1 bits (1520), Expect = 1.1e-164
Identity = 292/308 (94.81%), Postives = 297/308 (96.43%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLESCSSTKNLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLP 60
           MPKPHEIIPFYAALL++CSST NLHTLKQIHALTI L ISHHHFIRTKLASTYAACAQLP
Sbjct: 1   MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60

Query: 61  QATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCT 120
           QATTIFSFATRRPTYLFN LIRAHSSLRLFSQSLSIFR MLLSGKSIDRHT PPVLKSCT
Sbjct: 61  QATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCT 120

Query: 121 GLSSLSLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSL LGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEF 240
           LMAGYGVHGMFGEVF LFERMVEEGQKPDELTFTSLLTACSHGG+IEKGKEYFGMMRMEF
Sbjct: 181 LMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEF 240

Query: 241 DLRPGLQHYTCMVDLLGRLGQVEEAEKLIMKMEMEPDEALWGAMLSACRIHGKADVADRV 300
            LRPGLQHYTCMVDLLGR GQVEEAEKLIM+ME+EPDEALWGAMLSACRIHGK DVADRV
Sbjct: 241 HLRPGLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRV 300

Query: 301 QKRFIKQQ 309
           QKRFIKQQ
Sbjct: 301 QKRFIKQQ 308

[Close]

BLAST of PI0029062 vs. NCBI nr
Match: KAA0059103.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ99627.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 581.6 bits (1498), Expect = 3.9e-162
Identity = 289/308 (93.83%), Postives = 295/308 (95.78%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLESCSSTKNLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLP 60
           MPKPHEIIPFYAALLE+CSSTKNLHTLKQIHALTI L ISHHHFIRTKLASTYAACAQLP
Sbjct: 1   MPKPHEIIPFYAALLEACSSTKNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60

Query: 61  QATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCT 120
           QA TIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFR MLLSGKS DRHTFP VLKSCT
Sbjct: 61  QANTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSGKSTDRHTFPLVLKSCT 120

Query: 121 GLSSLSLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSL LGRQVHGALLINGFSADLPSLNALITMY KCGDLGVARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYSKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEF 240
           LMAGYGVHGMFGEVF LFERMV+EGQ+PDELTFTSLLTACSHGG+IEKGKEYF  MRMEF
Sbjct: 181 LMAGYGVHGMFGEVFRLFERMVKEGQRPDELTFTSLLTACSHGGLIEKGKEYFRTMRMEF 240

Query: 241 DLRPGLQHYTCMVDLLGRLGQVEEAEKLIMKMEMEPDEALWGAMLSACRIHGKADVADRV 300
            LRPGLQHYTCMVDLLGRLGQVEEAEKLIM+MEMEPDEALWGAMLSACRIHG+ DVADRV
Sbjct: 241 HLRPGLQHYTCMVDLLGRLGQVEEAEKLIMEMEMEPDEALWGAMLSACRIHGRVDVADRV 300

Query: 301 QKRFIKQQ 309
           QKRFIKQQ
Sbjct: 301 QKRFIKQQ 308

[Close]

BLAST of PI0029062 vs. NCBI nr
Match: XP_008455480.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucumis melo])

HSP 1 Score: 578.9 bits (1491), Expect = 2.5e-161
Identity = 288/308 (93.51%), Postives = 294/308 (95.45%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLESCSSTKNLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLP 60
           MPKPHEIIPFYAALLE+CSSTKNLHTLKQIHALTI L ISHHHFIRTKLASTYAACAQLP
Sbjct: 1   MPKPHEIIPFYAALLEACSSTKNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60

Query: 61  QATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCT 120
           QA TIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFR MLLSGKS DRHTFP VLKSCT
Sbjct: 61  QANTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSGKSTDRHTFPLVLKSCT 120

Query: 121 GLSSLSLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSL LGRQVHGALLINGFSADLPSLNALITMY KCGDLGVARKVFDGMPERN VSWSA
Sbjct: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYSKCGDLGVARKVFDGMPERNGVSWSA 180

Query: 181 LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEF 240
           LMAGYGVHGMFGEVF LFERMV+EGQ+PDELTFTSLLTACSHGG+IEKGKEYF  MRMEF
Sbjct: 181 LMAGYGVHGMFGEVFRLFERMVKEGQRPDELTFTSLLTACSHGGLIEKGKEYFRTMRMEF 240

Query: 241 DLRPGLQHYTCMVDLLGRLGQVEEAEKLIMKMEMEPDEALWGAMLSACRIHGKADVADRV 300
            LRPGLQHYTCMVDLLGRLGQVEEAEKLIM+MEMEPDEALWGAMLSACRIHG+ DVADRV
Sbjct: 241 HLRPGLQHYTCMVDLLGRLGQVEEAEKLIMEMEMEPDEALWGAMLSACRIHGRVDVADRV 300

Query: 301 QKRFIKQQ 309
           QKRFIKQQ
Sbjct: 301 QKRFIKQQ 308

[Close]

BLAST of PI0029062 vs. NCBI nr
Match: XP_023520705.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 559.7 bits (1441), Expect = 1.6e-155
Identity = 273/307 (88.93%), Postives = 292/307 (95.11%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLESCSSTKNLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLP 60
           MPKP +IIPFYAALL++CSSTKN  TLKQIHALTIRL ISHH FIRTKLASTYAAC  LP
Sbjct: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60

Query: 61  QATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCT 120
           QATTIFSFATRRPT+LFNALIRAHSSLRLFSQSLSIFR ML+SGK IDRHT PPVLKSCT
Sbjct: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLVSGKPIDRHTLPPVLKSCT 120

Query: 121 GLSSLSLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSL LGRQVHGA++INGFS DLP+LNALITMYGKCGDLGVARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEF 240
           LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFT+LLTACSHGG+IE+GKEYFGMM+M F
Sbjct: 181 LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMKMGF 240

Query: 241 DLRPGLQHYTCMVDLLGRLGQVEEAEKLIMKMEMEPDEALWGAMLSACRIHGKADVADRV 300
           DLRPGL+HYTCMVDLLGR+GQVEEAEKLIM+ME+EPDEALWGA+L ACRIHGKA+VADRV
Sbjct: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLGACRIHGKAEVADRV 300

Query: 301 QKRFIKQ 308
           Q RF+KQ
Sbjct: 301 QTRFMKQ 307

[Close]

BLAST of PI0029062 vs. NCBI nr
Match: KAG6583697.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 559.7 bits (1441), Expect = 1.6e-155
Identity = 274/307 (89.25%), Postives = 291/307 (94.79%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLESCSSTKNLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLP 60
           MPKP +IIPFYAALL++CSSTKN  TLKQIHALTIRL ISHH FIRTKLASTYAAC  LP
Sbjct: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60

Query: 61  QATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCT 120
           QATTIFSFATRRPT+LFNALIRAHSSLRLFSQSLSIFR MLLSGK IDRHT PPV+KSCT
Sbjct: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCT 120

Query: 121 GLSSLSLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSL LGRQVHGA++INGFS DLP+LNALITMYGKCGDLGVARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEF 240
           LMAGYGVHGMF EVFGLFERMVEEGQKPDELTFT+LLTACSHGG+IE+GKEYFGMM M F
Sbjct: 181 LMAGYGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGF 240

Query: 241 DLRPGLQHYTCMVDLLGRLGQVEEAEKLIMKMEMEPDEALWGAMLSACRIHGKADVADRV 300
           DLRPGL+HYTCMVDLLGR+GQVEEAEKLIM+ME+EPDEALWGA+LSACRIHGKA+VADRV
Sbjct: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADRV 300

Query: 301 QKRFIKQ 308
           Q RFIKQ
Sbjct: 301 QTRFIKQ 307

[Close]

BLAST of PI0029062 vs. TAIR 10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 217.2 bits (552), Expect = 1.8e-56
Identity = 111/299 (37.12%), Postives = 179/299 (59.87%), Query Frame = 0


Query: 11  YAALLESCSSTK----NLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLPQATTIF 70
           Y  +L++C +++    +L   K+IHA   R   S H +I T L   YA    +  A+ +F
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF 240

Query: 71  SFATRRPTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGK--SIDRHTFPPVLKSCTGLSS 130
                R    ++A+I  ++      ++L  FR+M+   K  S +  T   VL++C  L++
Sbjct: 241 GGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAA 300

Query: 131 LSLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAG 190
           L  G+ +HG +L  G  + LP ++AL+TMYG+CG L V ++VFD M +R+ VSW++L++ 
Sbjct: 301 LEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISS 360

Query: 191 YGVHGMFGEVFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEFDLRP 250
           YGVHG   +   +FE M+  G  P  +TF S+L ACSH G++E+GK  F  M  +  ++P
Sbjct: 361 YGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKP 420

Query: 251 GLQHYTCMVDLLGRLGQVEEAEKLIMKMEMEPDEALWGAMLSACRIHGKADVADRVQKR 304
            ++HY CMVDLLGR  +++EA K++  M  EP   +WG++L +CRIHG  ++A+R  +R
Sbjct: 421 QIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRR 479

[Close]

BLAST of PI0029062 vs. TAIR 10
Match: AT1G06140.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 207.2 bits (526), Expect = 1.9e-53
Identity = 101/296 (34.12%), Postives = 168/296 (56.76%), Query Frame = 0


Query: 14  LLESCSSTKNLHTLKQIHALTIRLQ-ISHHHFIRTKLASTYAACAQLPQATTIFSFATRR 73
           L+++C +       K +H ++IR   I    +++  +   Y  C  L  A  +F  +  R
Sbjct: 216 LVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDR 275

Query: 74  PTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCTGLSSLSLGRQVH 133
              ++  LI   +      ++  +FRQML      ++ T   +L SC+ L SL  G+ VH
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335

Query: 134 GALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFG 193
           G ++ NG   D  +  + I MY +CG++ +AR VFD MPERN +SWS+++  +G++G+F 
Sbjct: 336 GYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFE 395

Query: 194 EVFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEFDLRPGLQHYTCM 253
           E    F +M  +   P+ +TF SLL+ACSH G +++G + F  M  ++ + P  +HY CM
Sbjct: 396 EALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACM 455

Query: 254 VDLLGRLGQVEEAEKLIMKMEMEPDEALWGAMLSACRIHGKADVADRVQKRFIKQQ 309
           VDLLGR G++ EA+  I  M ++P  + WGA+LSACRIH + D+A  + ++ +  +
Sbjct: 456 VDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSME 511

[Close]

BLAST of PI0029062 vs. TAIR 10
Match: AT3G13770.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 206.1 bits (523), Expect = 4.1e-53
Identity = 111/306 (36.27%), Postives = 172/306 (56.21%), Query Frame = 0


Query: 3   KPHEIIPFYAALLESCSSTKNLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLPQA 62
           KP+E    +A +L SC     L   KQIH L ++     H F+ + L   YA   Q+ +A
Sbjct: 150 KPNEFT--FATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEA 209

Query: 63  TTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCTGL 122
             IF     R      A+I  ++ L L  ++L +F ++   G S +  T+  +L + +GL
Sbjct: 210 REIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGL 269

Query: 123 SSLSLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALM 182
           + L  G+Q H  +L           N+LI MY KCG+L  AR++FD MPER  +SW+A++
Sbjct: 270 ALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAML 329

Query: 183 AGYGVHGMFGEVFGLFERMVEEGQ-KPDELTFTSLLTACSHGGMIEKGKEYF-GMMRMEF 242
            GY  HG+  EV  LF  M +E + KPD +T  ++L+ CSHG M + G   F GM+  E+
Sbjct: 330 VGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEY 389

Query: 243 DLRPGLQHYTCMVDLLGRLGQVEEAEKLIMKMEMEPDEALWGAMLSACRIHGKADVADRV 302
             +PG +HY C+VD+LGR G+++EA + I +M  +P   + G++L ACR+H   D+ + V
Sbjct: 390 GTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESV 449

Query: 303 QKRFIK 307
            +R I+
Sbjct: 450 GRRLIE 453

[Close]

BLAST of PI0029062 vs. TAIR 10
Match: AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 204.1 bits (518), Expect = 1.6e-52
Identity = 102/295 (34.58%), Postives = 166/295 (56.27%), Query Frame = 0


Query: 13  ALLESCSSTKNLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLPQATTIFSFATRR 72
           +LL +CS  K+L   K++H   IR  +    F+   + S Y  C +L     +F     +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560

Query: 73  PTYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCTGLSSLSLGRQVH 132
               +N +I  +       ++L +FRQM+L G  +   +  PV  +C+ L SL LGR+ H
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620

Query: 133 GALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFG 192
              L +    D     +LI MY K G +  + KVF+G+ E++  SW+A++ GYG+HG+  
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680

Query: 193 EVFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEFDLRPGLQHYTCM 252
           E   LFE M   G  PD+LTF  +LTAC+H G+I +G  Y   M+  F L+P L+HY C+
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 740

Query: 253 VDLLGRLGQVEEAEKLIM-KMEMEPDEALWGAMLSACRIHGKADVADRVQKRFIK 307
           +D+LGR GQ+++A +++  +M  E D  +W ++LS+CRIH   ++ ++V  +  +
Sbjct: 741 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFE 795

[Close]

BLAST of PI0029062 vs. TAIR 10
Match: AT2G33680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 203.8 bits (517), Expect = 2.1e-52
Identity = 106/283 (37.46%), Postives = 161/283 (56.89%), Query Frame = 0


Query: 14  LLESCSSTKNLHTLKQIHALTIRLQISHHHFIRTKLASTYAACAQLPQATTIFSFATRRP 73
           +L +CS    L   KQ+H+  ++L    H F  T L   YA    L  A   F     R 
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERD 387

Query: 74  TYLFNALIRAHSSLRLFSQSLSIFRQMLLSGKSIDRHTFPPVLKSCTGLSSLSLGRQVHG 133
             L+ +LI  +       ++L ++R+M  +G   +  T   VLK+C+ L++L LG+QVHG
Sbjct: 388 VALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHG 447

Query: 134 ALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGE 193
             + +GF  ++P  +AL TMY KCG L     VF   P ++ VSW+A+++G   +G   E
Sbjct: 448 HTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDE 507

Query: 194 VFGLFERMVEEGQKPDELTFTSLLTACSHGGMIEKGKEYFGMMRMEFDLRPGLQHYTCMV 253
              LFE M+ EG +PD++TF ++++ACSH G +E+G  YF MM  +  L P + HY CMV
Sbjct: 508 ALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMV 567

Query: 254 DLLGRLGQVEEAEKLIMKMEMEPDEALWGAMLSACRIHGKADV 297
           DLL R GQ++EA++ I    ++    LW  +LSAC+ HGK ++
Sbjct: 568 DLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCEL 610

The following BLAST results are available for this feature:

BLAST of PI0029062 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STF3	2.5e-55	37.12	Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop...	[more]
Q9LND4	2.6e-52	34.12	Pentatricopeptide repeat-containing protein At1g06140, mitochondrial OS=Arabidop...	[more]
Q9LIC3	5.8e-52	36.27	Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS...	[more]
Q0WN60	2.2e-51	34.58	Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX...	[more]
P93005	2.9e-51	37.46	Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX...	[more]

BLAST of PI0029062 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1F7	5.3e-165	94.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041310 PE=4 SV=1	[more]
A0A5A7UT42	1.9e-162	93.83	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C0K0	1.2e-161	93.51	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cuc...	[more]
A0A6J1EHW3	3.8e-155	88.60	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cuc...	[more]
A0A6J1I7X0	8.5e-155	88.35	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cuc...	[more]

BLAST of PI0029062 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144516.1	1.1e-164	94.81	pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucumis sa...	[more]
KAA0059103.1	3.9e-162	93.83	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ99627...	[more]
XP_008455480.1	2.5e-161	93.51	PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic-...	[more]
XP_023520705.1	1.6e-155	88.93	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur...	[more]
KAG6583697.1	1.6e-155	89.25	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of PI0029062 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46790.1	1.8e-56	37.12	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G06140.1	1.9e-53	34.12	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G13770.1	4.1e-53	36.27	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G18485.1	1.6e-52	34.58	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G33680.1	2.1e-52	37.46	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 76..104 e-value: 0.015 score: 15.5 coord: 249..273 e-value: 1.5E-4 score: 21.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 176..210 e-value: 2.7E-7 score: 28.3 coord: 76..107 e-value: 0.0022 score: 16.0 coord: 212..244 e-value: 1.4E-4 score: 19.8 coord: 147..174 e-value: 5.4E-4 score: 18.0 coord: 249..273 e-value: 5.2E-4 score: 18.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 174..221 e-value: 1.0E-10 score: 41.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 174..208 score: 11.575191
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 143..173 score: 8.637562
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 72..239 e-value: 1.1E-34 score: 122.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 240..308 e-value: 3.3E-9 score: 38.6
None	No IPR available	PANTHER	PTHR47929	FAMILY NOT NAMED	coord: 16..185 coord: 119..306
None	No IPR available	PANTHER	PTHR47929:SF22	SUBFAMILY NOT NAMED	coord: 16..185 coord: 119..306

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0029062.1	PI0029062.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding