PI0029041 (gene) Melon (PI 482460) v1

Overview


Name	PI0029041
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	dynamin-like protein
Location	chr08: 22753461 .. 22754053 (+)
RNA-Seq Expression	PI0029041
Synteny	PI0029041

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCGTACTTTTACAGCCCAATTGCATTATTCTAACAATATCTCCTGCCAATCAAGACGCAGCAACTTCTGATGCCATTAAACTTGCAAGGGAAGTGCACCCATCTGGTATGTTCTGCTTGTAGTTCCCTTTCTTTTCTTCTTCTCTTCCCTTTTTGTCCTTTAAATTTCTGTAAAATTTGTAGCTTTTCAAGCTGGTAATTGTTTTTTTTGTTTTTTTTTTTTGCGATGAGTAGGGGAAAGGACTTTTGGGGTTGGGGTGTTGACGAAGCATGACTTGATGGACAAAGGAACTCTAATGCTTTGGATGTAAGTTGTTATCCTGTTATTAGTTTTTGAGGCTTTGCTAGGAGAAATCTTATTTTAGCAAAGATTGAATTGTTAATGAGTAATCTTGAATGCTCAAAGATTTACAGTTGAACTTCGCAGTTATTTTTCGTTAATTATAATTCCTACAGTATCAAAGAATTAGATATATGCTTTAGTTTAAAGGAGGAAGTGAAACATATACGTTCATTTTTTTAAAAGGTTTTGGAAGGAAGATCATTTCAACTACAACATCCACTGGCATAGTGAACCGATCTCAAGCTGA

mRNA sequence

ATGTGCGTACTTTTACAGCCCAATTGCATTATTCTAACAATATCTCCTGCCAATCAAGACGCAGCAACTTCTGATGCCATTAAACTTGCAAGGGAAGTGCACCCATCTGGGGAAAGGACTTTTGGGGTTGGGGTGTTGACGAAGCATGACTTGATGGACAAAGGAACTCTAATGCTTTGGATGTTTTGGAAGGAAGATCATTTCAACTACAACATCCACTGGCATAGTGAACCGATCTCAAGCTGA

Coding sequence (CDS)

ATGTGCGTACTTTTACAGCCCAATTGCATTATTCTAACAATATCTCCTGCCAATCAAGACGCAGCAACTTCTGATGCCATTAAACTTGCAAGGGAAGTGCACCCATCTGGGGAAAGGACTTTTGGGGTTGGGGTGTTGACGAAGCATGACTTGATGGACAAAGGAACTCTAATGCTTTGGATGTTTTGGAAGGAAGATCATTTCAACTACAACATCCACTGGCATAGTGAACCGATCTCAAGCTGA

Protein sequence

MCVLLQPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGTLMLWMFWKEDHFNYNIHWHSEPISS

Homology

[Close]

BLAST of PI0029041 vs. ExPASy Swiss-Prot
Match: P42697 (Phragmoplastin DRP1A OS=Arabidopsis thaliana OX=3702 GN=DRP1A PE=1 SV=3)

HSP 1 Score: 81.3 bits (199), Expect = 5.7e-15
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 6   QPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
           +PNCIIL ISPANQD ATSDAIK++REV PSG+RTF  GVLTK DLMDKGT
Sbjct: 172 KPNCIILAISPANQDLATSDAIKISREVDPSGDRTF--GVLTKIDLMDKGT 220

[Close]

BLAST of PI0029041 vs. ExPASy Swiss-Prot
Match: Q8LF21 (Phragmoplastin DRP1C OS=Arabidopsis thaliana OX=3702 GN=DRP1C PE=1 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 7.4e-15
Identity = 41/51 (80.39%), Postives = 44/51 (86.27%), Query Frame = 0


Query: 6   QPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
           +PNCIIL ISPANQD ATSDAIKLAREV P+GERTFGV   TK D+MDKGT
Sbjct: 173 KPNCIILAISPANQDIATSDAIKLAREVDPTGERTFGVA--TKLDIMDKGT 221

[Close]

BLAST of PI0029041 vs. ExPASy Swiss-Prot
Match: Q9FNX5 (Phragmoplastin DRP1E OS=Arabidopsis thaliana OX=3702 GN=DRP1E PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 7.4e-15
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 6   QPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
           +PNCIIL ISPANQD ATSDAIKLA++V P+GERTF  GVLTK DLMDKGT
Sbjct: 178 KPNCIILAISPANQDIATSDAIKLAKDVDPTGERTF--GVLTKLDLMDKGT 226

[Close]

BLAST of PI0029041 vs. ExPASy Swiss-Prot
Match: Q39828 (Dynamin-related protein 5A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.8e-14
Identity = 39/51 (76.47%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 6   QPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
           +PNCIIL ISPANQD ATSDAIK++REV P+G+RT  +GVLTK DLMDKGT
Sbjct: 172 KPNCIILAISPANQDLATSDAIKISREVDPTGDRT--IGVLTKIDLMDKGT 220

[Close]

BLAST of PI0029041 vs. ExPASy Swiss-Prot
Match: Q39821 (Dynamin-related protein 12A OS=Glycine max OX=3847 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.8e-14
Identity = 39/51 (76.47%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 6   QPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
           +PNCIIL ISPANQD ATSDAIK++REV P+G+RT  +GVLTK DLMDKGT
Sbjct: 172 KPNCIILAISPANQDLATSDAIKISREVDPTGDRT--IGVLTKIDLMDKGT 220

[Close]

BLAST of PI0029041 vs. ExPASy TrEMBL
Match: A0A445LLF4 (Dynamin-related protein 1C isoform B OS=Glycine soja OX=3848 GN=D0Y65_003354 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-13
Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 0


Query: 3  VLLQPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
          +++QPNCIIL ISPANQD ATSDAIK+AREV PSGERTF  GV+TK DLMDKGT
Sbjct: 11 LIVQPNCIILAISPANQDIATSDAIKIAREVDPSGERTF--GVVTKLDLMDKGT 62

[Close]

BLAST of PI0029041 vs. ExPASy TrEMBL
Match: A0A445D777 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A05g024724 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.9e-13
Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 4  LLQPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
          +LQPNCIIL ISPANQD ATSDAIK++REV P+GERTF  GVLTK DLMDKGT
Sbjct: 49 ILQPNCIILAISPANQDLATSDAIKISREVDPTGERTF--GVLTKIDLMDKGT 99

[Close]

BLAST of PI0029041 vs. ExPASy TrEMBL
Match: A0A7J8MF03 (Dynamin-type G domain-containing protein OS=Gossypium lobatum OX=34289 GN=Golob_008266 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.9e-13
Identity = 44/53 (83.02%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 4  LLQPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
          L+ PNCIIL ISPANQD ATSDAIKLAR+V PSGERTF  GVLTK DLMDKGT
Sbjct: 25 LIHPNCIILAISPANQDIATSDAIKLARDVDPSGERTF--GVLTKLDLMDKGT 75

[Close]

BLAST of PI0029041 vs. ExPASy TrEMBL
Match: A0A2G5C772 (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_09100067v1 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.5e-13
Identity = 44/51 (86.27%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 6   QPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
           +PNCIIL ISPANQD ATSDAIKLAREV PSGERTF  GVLTK DLMDKGT
Sbjct: 214 KPNCIILAISPANQDIATSDAIKLAREVDPSGERTF--GVLTKLDLMDKGT 262

[Close]

BLAST of PI0029041 vs. ExPASy TrEMBL
Match: A0A218W4L5 (dynamin-related protein 1C OS=Punica granatum OX=22663 GN=LOC116194582 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.5e-13
Identity = 44/51 (86.27%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 6   QPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
           +PNCIIL ISPANQD ATSDAIKLAREV PSGERTF  GVLTK DLMDKGT
Sbjct: 172 KPNCIILAISPANQDIATSDAIKLAREVDPSGERTF--GVLTKLDLMDKGT 220

[Close]

BLAST of PI0029041 vs. NCBI nr
Match: KAF9673785.1 (hypothetical protein SADUNF_Sadunf10G0060000 [Salix dunnii])

HSP 1 Score: 85.5 bits (210), Expect = 2.3e-13
Identity = 45/54 (83.33%), Postives = 47/54 (87.04%), Query Frame = 0


Query: 3   VLLQPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
           +L+ PNCIIL ISPANQD ATSDAIKLAREV PSGERTF  GVLTK DLMDKGT
Sbjct: 182 LLVAPNCIILAISPANQDIATSDAIKLAREVDPSGERTF--GVLTKLDLMDKGT 233

[Close]

BLAST of PI0029041 vs. NCBI nr
Match: KAG4401895.1 (hypothetical protein GLYMA_02G085700v4 [Glycine max] >RZC24005.1 Dynamin-related protein 1C isoform B [Glycine soja])

HSP 1 Score: 85.1 bits (209), Expect = 3.0e-13
Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 0


Query: 3  VLLQPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
          +++QPNCIIL ISPANQD ATSDAIK+AREV PSGERTF  GV+TK DLMDKGT
Sbjct: 11 LIVQPNCIILAISPANQDIATSDAIKIAREVDPSGERTF--GVVTKLDLMDKGT 62

[Close]

BLAST of PI0029041 vs. NCBI nr
Match: KAG0455749.1 (hypothetical protein HPP92_023537 [Vanilla planifolia])

HSP 1 Score: 85.1 bits (209), Expect = 3.0e-13
Identity = 44/52 (84.62%), Postives = 45/52 (86.54%), Query Frame = 0


Query: 5  LQPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
          LQPNCIIL ISPANQD ATSDAIK+AREV P GERTF  GVLTK DLMDKGT
Sbjct: 28 LQPNCIILAISPANQDLATSDAIKIAREVDPKGERTF--GVLTKIDLMDKGT 77

[Close]

BLAST of PI0029041 vs. NCBI nr
Match: KAG5021737.1 (hypothetical protein JHK85_018079 [Glycine max])

HSP 1 Score: 85.1 bits (209), Expect = 3.0e-13
Identity = 44/53 (83.02%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 4   LLQPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
           LLQPNCIIL ISPANQD ATSDAIK++REV P GERTF  GVLTK DLMDKGT
Sbjct: 114 LLQPNCIILAISPANQDLATSDAIKISREVDPKGERTF--GVLTKIDLMDKGT 164

[Close]

BLAST of PI0029041 vs. NCBI nr
Match: CAA2945746.1 (dynamin-related 1E [Olea europaea subsp. europaea])

HSP 1 Score: 84.7 bits (208), Expect = 3.9e-13
Identity = 44/51 (86.27%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 6  QPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
          QPNCIIL ISPANQD ATSDAIKLAREV PSG+RTF  GVLTK DLMDKGT
Sbjct: 7  QPNCIILAISPANQDIATSDAIKLAREVDPSGDRTF--GVLTKLDLMDKGT 55

[Close]

BLAST of PI0029041 vs. TAIR 10
Match: AT5G42080.1 (dynamin-like protein )

HSP 1 Score: 81.3 bits (199), Expect = 4.0e-16
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 6   QPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
           +PNCIIL ISPANQD ATSDAIK++REV PSG+RTF  GVLTK DLMDKGT
Sbjct: 172 KPNCIILAISPANQDLATSDAIKISREVDPSGDRTF--GVLTKIDLMDKGT 220

[Close]

BLAST of PI0029041 vs. TAIR 10
Match: AT5G42080.2 (dynamin-like protein )

HSP 1 Score: 81.3 bits (199), Expect = 4.0e-16
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 6   QPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
           +PNCIIL ISPANQD ATSDAIK++REV PSG+RTF  GVLTK DLMDKGT
Sbjct: 172 KPNCIILAISPANQDLATSDAIKISREVDPSGDRTF--GVLTKIDLMDKGT 220

[Close]

BLAST of PI0029041 vs. TAIR 10
Match: AT5G42080.3 (dynamin-like protein )

HSP 1 Score: 81.3 bits (199), Expect = 4.0e-16
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 6   QPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
           +PNCIIL ISPANQD ATSDAIK++REV PSG+RTF  GVLTK DLMDKGT
Sbjct: 172 KPNCIILAISPANQDLATSDAIKISREVDPSGDRTF--GVLTKIDLMDKGT 220

[Close]

BLAST of PI0029041 vs. TAIR 10
Match: AT1G14830.1 (DYNAMIN-like 1C )

HSP 1 Score: 80.9 bits (198), Expect = 5.3e-16
Identity = 41/51 (80.39%), Postives = 44/51 (86.27%), Query Frame = 0


Query: 6   QPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
           +PNCIIL ISPANQD ATSDAIKLAREV P+GERTFGV   TK D+MDKGT
Sbjct: 173 KPNCIILAISPANQDIATSDAIKLAREVDPTGERTFGVA--TKLDIMDKGT 221

[Close]

BLAST of PI0029041 vs. TAIR 10
Match: AT3G60190.1 (DYNAMIN-like 1E )

HSP 1 Score: 80.9 bits (198), Expect = 5.3e-16
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 6   QPNCIILTISPANQDAATSDAIKLAREVHPSGERTFGVGVLTKHDLMDKGT 57
           +PNCIIL ISPANQD ATSDAIKLA++V P+GERTF  GVLTK DLMDKGT
Sbjct: 178 KPNCIILAISPANQDIATSDAIKLAKDVDPTGERTF--GVLTKLDLMDKGT 226

The following BLAST results are available for this feature:

BLAST of PI0029041 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42697	5.7e-15	80.39	Phragmoplastin DRP1A OS=Arabidopsis thaliana OX=3702 GN=DRP1A PE=1 SV=3	[more]
Q8LF21	7.4e-15	80.39	Phragmoplastin DRP1C OS=Arabidopsis thaliana OX=3702 GN=DRP1C PE=1 SV=2	[more]
Q9FNX5	7.4e-15	80.39	Phragmoplastin DRP1E OS=Arabidopsis thaliana OX=3702 GN=DRP1E PE=1 SV=1	[more]
Q39828	2.8e-14	76.47	Dynamin-related protein 5A OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q39821	2.8e-14	76.47	Dynamin-related protein 12A OS=Glycine max OX=3847 PE=1 SV=1	[more]

BLAST of PI0029041 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A445LLF4	1.5e-13	79.63	Dynamin-related protein 1C isoform B OS=Glycine soja OX=3848 GN=D0Y65_003354 PE=...	[more]
A0A445D777	1.9e-13	81.13	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A05g024724 PE=4 SV=1	[more]
A0A7J8MF03	1.9e-13	83.02	Dynamin-type G domain-containing protein OS=Gossypium lobatum OX=34289 GN=Golob_...	[more]
A0A2G5C772	2.5e-13	86.27	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_09100067v1 PE=3...	[more]
A0A218W4L5	2.5e-13	86.27	dynamin-related protein 1C OS=Punica granatum OX=22663 GN=LOC116194582 PE=3 SV=1	[more]

BLAST of PI0029041 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF9673785.1	2.3e-13	83.33	hypothetical protein SADUNF_Sadunf10G0060000 [Salix dunnii]	[more]
KAG4401895.1	3.0e-13	79.63	hypothetical protein GLYMA_02G085700v4 [Glycine max] >RZC24005.1 Dynamin-related...	[more]
KAG0455749.1	3.0e-13	84.62	hypothetical protein HPP92_023537 [Vanilla planifolia]	[more]
KAG5021737.1	3.0e-13	83.02	hypothetical protein JHK85_018079 [Glycine max]	[more]
CAA2945746.1	3.9e-13	86.27	dynamin-related 1E [Olea europaea subsp. europaea]	[more]

BLAST of PI0029041 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42080.1	4.0e-16	80.39	dynamin-like protein	[more]
AT5G42080.2	4.0e-16	80.39	dynamin-like protein	[more]
AT5G42080.3	4.0e-16	80.39	dynamin-like protein	[more]
AT1G14830.1	5.3e-16	80.39	DYNAMIN-like 1C	[more]
AT3G60190.1	5.3e-16	80.39	DYNAMIN-like 1E	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022812	Dynamin	PRINTS	PR00195	DYNAMIN	coord: 16..34 score: 58.43 coord: 35..51 score: 33.97
IPR022812	Dynamin	PANTHER	PTHR11566	DYNAMIN	coord: 6..56
IPR045063	Dynamin, N-terminal	PFAM	PF00350	Dynamin_N	coord: 5..43 e-value: 7.5E-8 score: 32.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..75 e-value: 1.3E-17 score: 65.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..60
None	No IPR available	PANTHER	PTHR11566:SF179	BNAC06G13930D PROTEIN	coord: 6..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0029041.1	PI0029041.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding