Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATGCTCGTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAGAAATATTACCAGGCTCTATATCACTCGACCGGGAGCAGCTGTAGGTCATCTGGTACGTATTTAAATATTGTCTAATTGTTTTTAGTACAAATTAATTTTTAATAGTTTCTAATTAATTTTAATATTTCACAGAGGTCGAACAATAGTAGACTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAATAACGAGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACAAGTGCAAGAAGTGCCTCCTGTGAAACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATGATGATGATGCCGGCATTTGGAACAGGATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTCGGGACAGGATATTATAATTCAGAGGCAGGTCCATCGTCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCGTCTTCATACATGCATGGACATGGGCGTGGTCGTGGAGAACATAACGAATATTTGTACTACGAACCACCTGCAACGGTACTCGAGCAGCCAGATGAGCAACAACAAGAGAATCAGGAGGGACTAGAGCAACAAAGAGTGCATGATCGACGACGGCAACCAGCAAGAAATCGGCGACGTCCAGATTGTGGAACACATTGA
mRNA sequence
ATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATGCTCGTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAGAAATATTACCAGGCTCTATATCACTCGACCGGGAGCAGCTGTAGGTCATCTGAGGTCGAACAATAGTAGACTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAATAACGAGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACAAGTGCAAGAAGTGCCTCCTGTGAAACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATGATGATGATGCCGGCATTTGGAACAGGATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTCGGGACAGGATATTATAATTCAGAGGCAGGTCCATCGTCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCGTCTTCATACATGCATGGACATGGGCGTGGTCGTGGAGAACATAACGAATATTTGTACTACGAACCACCTGCAACGGTACTCGAGCAGCCAGATGAGCAACAACAAGAGAATCAGGAGGGACTAGAGCAACAAAGAGTGCATGATCGACGACGGCAACCAGCAAGAAATCGGCGACGTCCAGATTGTGGAACACATTGA
Coding sequence (CDS)
ATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATGCTCGTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAGAAATATTACCAGGCTCTATATCACTCGACCGGGAGCAGCTGTAGGTCATCTGAGGTCGAACAATAGTAGACTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAATAACGAGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACAAGTGCAAGAAGTGCCTCCTGTGAAACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATGATGATGATGCCGGCATTTGGAACAGGATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTCGGGACAGGATATTATAATTCAGAGGCAGGTCCATCGTCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCGTCTTCATACATGCATGGACATGGGCGTGGTCGTGGAGAACATAACGAATATTTGTACTACGAACCACCTGCAACGGTACTCGAGCAGCCAGATGAGCAACAACAAGAGAATCAGGAGGGACTAGAGCAACAAAGAGTGCATGATCGACGACGGCAACCAGCAAGAAATCGGCGACGTCCAGATTGTGGAACACATTGA
Protein sequence
MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPVKQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLYYEPPATVLEQPDEQQQENQEGLEQQRVHDRRRQPARNRRRPDCGTH
Homology
BLAST of PI0028977 vs. ExPASy TrEMBL
Match:
A0A5A7VIP6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001330 PE=4 SV=1)
HSP 1 Score: 372.9 bits (956), Expect = 1.1e-99
Identity = 192/262 (73.28%), Postives = 213/262 (81.30%), Query Frame = 0
Query: 1 MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVA 60
MRW NRRRF ATG QFD+DVT EYINWY+NI++LYIT+PGA + HLRSNN RLR+VA
Sbjct: 366 MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMSHLRSNNIRLRNVA 425
Query: 61 DDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPVK 120
DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+
Sbjct: 426 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 485
Query: 121 QTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDP 180
QTQS VSP+MMMP FGT YYDS VGQSSDFG GYYNSEAG SS++FGQ YYDLG+DP
Sbjct: 486 QTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDP 545
Query: 181 SSSYMHGHGRGRGEHNEYLYYEPPATVLEQPDE----------------QQQENQEGLEQ 240
SSSYMHGHGRGRGEHNEYLYYE PA V EQ +E QQQENQE ++Q
Sbjct: 546 SSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQ 605
Query: 241 QRVHDRRRQPARNRRRPDCGTH 247
QRV RRRQPARNRRRP CGTH
Sbjct: 606 QRVQSRRRQPARNRRRPGCGTH 627
BLAST of PI0028977 vs. ExPASy TrEMBL
Match:
A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)
HSP 1 Score: 372.1 bits (954), Expect = 1.8e-99
Identity = 191/262 (72.90%), Postives = 214/262 (81.68%), Query Frame = 0
Query: 1 MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVA 60
MRW NRRRF ATG QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR+VA
Sbjct: 1014 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 1073
Query: 61 DDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPVK 120
DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+
Sbjct: 1074 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMT 1133
Query: 121 QTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDP 180
QTQS VSP+MMMP FGT YYDSGVGQSSDFG GYYNS+AG SS++FGQ YYDLG+DP
Sbjct: 1134 QTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDP 1193
Query: 181 SSSYMHGHGRGRGEHNEYLYYEPPATVLEQPDE----------------QQQENQEGLEQ 240
SSSYMHGHGRGRG+HNEYLYYE PA V EQ DE QQQEN E ++Q
Sbjct: 1194 SSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEIQQ 1253
Query: 241 QRVHDRRRQPARNRRRPDCGTH 247
QRV RRRQPARNRRRP CGTH
Sbjct: 1254 QRVQSRRRQPARNRRRPGCGTH 1275
BLAST of PI0028977 vs. ExPASy TrEMBL
Match:
A0A5A7T598 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00500 PE=4 SV=1)
HSP 1 Score: 372.1 bits (954), Expect = 1.8e-99
Identity = 191/262 (72.90%), Postives = 214/262 (81.68%), Query Frame = 0
Query: 1 MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVA 60
MRW NRRRF ATG QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR+VA
Sbjct: 253 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 312
Query: 61 DDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPVK 120
DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+
Sbjct: 313 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMT 372
Query: 121 QTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDP 180
QTQS VSP+MMMP FGT YYDSGVGQSSDFG GYYNS+AG SS++FGQ YYDLG+DP
Sbjct: 373 QTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDP 432
Query: 181 SSSYMHGHGRGRGEHNEYLYYEPPATVLEQPDE----------------QQQENQEGLEQ 240
SSSYMHGHGRGRG+HNEYLYYE PA V EQ DE QQQEN E ++Q
Sbjct: 433 SSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEIQQ 492
Query: 241 QRVHDRRRQPARNRRRPDCGTH 247
QRV RRRQPARNRRRP CGTH
Sbjct: 493 QRVQSRRRQPARNRRRPGCGTH 514
BLAST of PI0028977 vs. ExPASy TrEMBL
Match:
A0A5D3DUI1 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001210 PE=4 SV=1)
HSP 1 Score: 356.7 bits (914), Expect = 7.9e-95
Identity = 186/264 (70.45%), Postives = 212/264 (80.30%), Query Frame = 0
Query: 1 MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVA 60
MRW NRRRF ATG QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN+RLR++A
Sbjct: 744 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 803
Query: 61 DDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPV- 120
DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR VQE D+LEEV+Q +EVPP+
Sbjct: 804 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 863
Query: 121 -KQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGT 180
QTQS VSP+MMMP FG YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG+
Sbjct: 864 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 923
Query: 181 DPSSSYMHGHGRGRGEHNEYLYYEPPATVLEQPDE----------------QQQENQEGL 240
DPSSSYMHGHGRGRGEHNEYLYY+ PA V EQ DE QQQEN E +
Sbjct: 924 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 983
Query: 241 EQQRVHDRRRQPARNRRRPDCGTH 247
+QQRV RRRQ A+NR+RP CGTH
Sbjct: 984 QQQRVQIRRRQLAKNRQRPGCGTH 1007
BLAST of PI0028977 vs. ExPASy TrEMBL
Match:
A0A1S3BLK4 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491376 PE=4 SV=1)
HSP 1 Score: 356.7 bits (914), Expect = 7.9e-95
Identity = 186/264 (70.45%), Postives = 212/264 (80.30%), Query Frame = 0
Query: 1 MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVA 60
MRW NRRRF ATG QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN+RLR++A
Sbjct: 1 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 60
Query: 61 DDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPV- 120
DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR VQE D+LEEV+Q +EVPP+
Sbjct: 61 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 120
Query: 121 -KQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGT 180
QTQS VSP+MMMP FG YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG+
Sbjct: 121 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180
Query: 181 DPSSSYMHGHGRGRGEHNEYLYYEPPATVLEQPDE----------------QQQENQEGL 240
DPSSSYMHGHGRGRGEHNEYLYY+ PA V EQ DE QQQEN E +
Sbjct: 181 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240
Query: 241 EQQRVHDRRRQPARNRRRPDCGTH 247
+QQRV RRRQ A+NR+RP CGTH
Sbjct: 241 QQQRVQIRRRQLAKNRQRPGCGTH 264
BLAST of PI0028977 vs. NCBI nr
Match:
KAA0067080.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 372.9 bits (956), Expect = 2.2e-99
Identity = 192/262 (73.28%), Postives = 213/262 (81.30%), Query Frame = 0
Query: 1 MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVA 60
MRW NRRRF ATG QFD+DVT EYINWY+NI++LYIT+PGA + HLRSNN RLR+VA
Sbjct: 366 MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMSHLRSNNIRLRNVA 425
Query: 61 DDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPVK 120
DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+
Sbjct: 426 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 485
Query: 121 QTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDP 180
QTQS VSP+MMMP FGT YYDS VGQSSDFG GYYNSEAG SS++FGQ YYDLG+DP
Sbjct: 486 QTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDP 545
Query: 181 SSSYMHGHGRGRGEHNEYLYYEPPATVLEQPDE----------------QQQENQEGLEQ 240
SSSYMHGHGRGRGEHNEYLYYE PA V EQ +E QQQENQE ++Q
Sbjct: 546 SSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQ 605
Query: 241 QRVHDRRRQPARNRRRPDCGTH 247
QRV RRRQPARNRRRP CGTH
Sbjct: 606 QRVQSRRRQPARNRRRPGCGTH 627
BLAST of PI0028977 vs. NCBI nr
Match:
KAA0036767.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 372.1 bits (954), Expect = 3.7e-99
Identity = 191/262 (72.90%), Postives = 214/262 (81.68%), Query Frame = 0
Query: 1 MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVA 60
MRW NRRRF ATG QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR+VA
Sbjct: 253 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 312
Query: 61 DDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPVK 120
DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+
Sbjct: 313 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMT 372
Query: 121 QTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDP 180
QTQS VSP+MMMP FGT YYDSGVGQSSDFG GYYNS+AG SS++FGQ YYDLG+DP
Sbjct: 373 QTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDP 432
Query: 181 SSSYMHGHGRGRGEHNEYLYYEPPATVLEQPDE----------------QQQENQEGLEQ 240
SSSYMHGHGRGRG+HNEYLYYE PA V EQ DE QQQEN E ++Q
Sbjct: 433 SSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEIQQ 492
Query: 241 QRVHDRRRQPARNRRRPDCGTH 247
QRV RRRQPARNRRRP CGTH
Sbjct: 493 QRVQSRRRQPARNRRRPGCGTH 514
BLAST of PI0028977 vs. NCBI nr
Match:
TYJ95836.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 372.1 bits (954), Expect = 3.7e-99
Identity = 191/262 (72.90%), Postives = 214/262 (81.68%), Query Frame = 0
Query: 1 MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVA 60
MRW NRRRF ATG QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR+VA
Sbjct: 1014 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 1073
Query: 61 DDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPVK 120
DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+
Sbjct: 1074 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMT 1133
Query: 121 QTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDP 180
QTQS VSP+MMMP FGT YYDSGVGQSSDFG GYYNS+AG SS++FGQ YYDLG+DP
Sbjct: 1134 QTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDP 1193
Query: 181 SSSYMHGHGRGRGEHNEYLYYEPPATVLEQPDE----------------QQQENQEGLEQ 240
SSSYMHGHGRGRG+HNEYLYYE PA V EQ DE QQQEN E ++Q
Sbjct: 1194 SSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEIQQ 1253
Query: 241 QRVHDRRRQPARNRRRPDCGTH 247
QRV RRRQPARNRRRP CGTH
Sbjct: 1254 QRVQSRRRQPARNRRRPGCGTH 1275
BLAST of PI0028977 vs. NCBI nr
Match:
XP_008449513.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo])
HSP 1 Score: 356.7 bits (914), Expect = 1.6e-94
Identity = 186/264 (70.45%), Postives = 212/264 (80.30%), Query Frame = 0
Query: 1 MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVA 60
MRW NRRRF ATG QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN+RLR++A
Sbjct: 1 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 60
Query: 61 DDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPV- 120
DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR VQE D+LEEV+Q +EVPP+
Sbjct: 61 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 120
Query: 121 -KQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGT 180
QTQS VSP+MMMP FG YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG+
Sbjct: 121 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180
Query: 181 DPSSSYMHGHGRGRGEHNEYLYYEPPATVLEQPDE----------------QQQENQEGL 240
DPSSSYMHGHGRGRGEHNEYLYY+ PA V EQ DE QQQEN E +
Sbjct: 181 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240
Query: 241 EQQRVHDRRRQPARNRRRPDCGTH 247
+QQRV RRRQ A+NR+RP CGTH
Sbjct: 241 QQQRVQIRRRQLAKNRQRPGCGTH 264
BLAST of PI0028977 vs. NCBI nr
Match:
TYK27427.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 356.7 bits (914), Expect = 1.6e-94
Identity = 186/264 (70.45%), Postives = 212/264 (80.30%), Query Frame = 0
Query: 1 MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNSRLRDVA 60
MRW NRRRF ATG QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN+RLR++A
Sbjct: 744 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 803
Query: 61 DDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPV- 120
DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR VQE D+LEEV+Q +EVPP+
Sbjct: 804 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 863
Query: 121 -KQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGT 180
QTQS VSP+MMMP FG YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG+
Sbjct: 864 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 923
Query: 181 DPSSSYMHGHGRGRGEHNEYLYYEPPATVLEQPDE----------------QQQENQEGL 240
DPSSSYMHGHGRGRGEHNEYLYY+ PA V EQ DE QQQEN E +
Sbjct: 924 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 983
Query: 241 EQQRVHDRRRQPARNRRRPDCGTH 247
+QQRV RRRQ A+NR+RP CGTH
Sbjct: 984 QQQRVQIRRRQLAKNRQRPGCGTH 1007
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7VIP6 | 1.1e-99 | 73.28 | Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
A0A5D3BAB0 | 1.8e-99 | 72.90 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
A0A5A7T598 | 1.8e-99 | 72.90 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
A0A5D3DUI1 | 7.9e-95 | 70.45 | Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
A0A1S3BLK4 | 7.9e-95 | 70.45 | mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
Match Name | E-value | Identity | Description | |
KAA0067080.1 | 2.2e-99 | 73.28 | mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... | [more] |
KAA0036767.1 | 3.7e-99 | 72.90 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
TYJ95836.1 | 3.7e-99 | 72.90 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
XP_008449513.1 | 1.6e-94 | 70.45 | PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X... | [more] |
TYK27427.1 | 1.6e-94 | 70.45 | mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... | [more] |
Match Name | E-value | Identity | Description | |