PI0028960 (gene) Melon (PI 482460) v1

Overview


Name	PI0028960
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Calmodulin
Location	chr04: 28348513 .. 28350104 (-)
RNA-Seq Expression	PI0028960
Synteny	PI0028960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATTGTACGTCAATATTTTGTAAAAAAGTAAGGTTAGTTCCAATTTTGAAACTTAGGTATCAAATCTTAACAAACTTAAATCTTTAAGGGTAATAATTTGAACATCTTGAAATTTAAAGACCAGTTGAAATCGAATTTAAAATTAAGGAATAAAAATATAACAATTTGAAATATAAGGATGAAGTAAAAGCTAATAAATAAAAGTATTTTCCTTGATTTGCCTTCAACAACGAAAAATTGAAACATACTATGTTATTTATTCAATAGATATCTTAGTCTTGTCAATTTGGATGGAGCCCTACTCATACTAATAAATAAATACACTTCTTTTAATTTCCTCCAGAAAAGAAAAATTGAAACCGAAATATATATGTGGATACATCTTATTGATCTTAAGTATCTCATCTTTTTCGAAAGAAAGAAAAATTTGTCATATGCAAACTTACGATTTAGTAAGTTGCACAAAAATGAGCGTAATTTAAAATATATTCACCTTCTTTATTCACCAACTTTTCGTAAAAGAAGAAGATAGGTAAAAGAAGAAGATAGATTAGTGTGATGATAAATACCTAATTTAGATGCAGTTATTATATTATTAATTTTCTAACAAACATTTTAATTTAATACAACCACTATCAGCTGTTACTTTAAAAAGTATTACATATCAAACAATTAACCTTTTTTTTTTTTCTTCATTATATAGTAACAAAACATCTCATCTAGAAATTAATTTCGCAATAACTTCATAGTGATCCTTTTCCCCTTCCAAAACAACATAATTTTCAAGGAAATTTCCATGCAATTTCGAGTAGGGTCTTTTGCAATTTCTTCAAAAATTTTCCAAAAGACTTTTACACACTTATTCACACATATATATAATATCCCTTTCTATATAATATTTATATCACCATTCATGCTTCCTTCCTAACCACTAAATTTACCAAAATGGCCATTTCATCCATTTCCATTCCCTTCAAATGGTTTACCAAAACCAATTTCAAGCTCAATTTCCCTCTCCTTCACTCCAAACACAAACCAACTTCCACTAAACCTCCTACGCCGCTGCCCCTTGCCGAGGTCGCTTTTCGCCATCTCGACGTCAATGGAGATGGAAAAATCTCTGGCGACGAACTACGATCCTACTTTGCATCGATAGGCGAGTACATGACATGGGATGATGCTCGAAGTGTGATTGGAGATTTTGACGGAGACGGTGACGAGTTACTAGAGCTTGGAGATTTCGAGCGACTCATAAAGGGAGAGGAGGAGGAGGAGGATTTGAAAAGGGCTTTTGAGATGTTTGAAGGTGAAAAGGGATGTGGATTCATTGGGGCAACGGGATTGCAAAAGATGTTTGGGAGGCTTGGATACGTGAAATCAAAAGAAGAGTGCATGGCTATGATCAAAGTGTTTGATGTTGATGGCGATGGTGTAATTGATTATCATGAATTTCTTAGAATGATGACTTGACTATCTAATTTAACGTCCTAATAAGTTGTCTTTTGATTTTCTCTTTTGTTTGTTTCTTTTTTCCGTTTCTTGGTGAATGTTAATGAAAATTGTGATCGTAAATTTGAGGGGTGTTTTCTTT

mRNA sequence

AGATTGTACGTCAATATTTTGTAAAAAAGTAAGGTTAGTTCCAATTTTGAAACTTAGGTATCAAATCTTAACAAACTTAAATCTTTAAGGGTAATAATTTGAACATCTTGAAATTTAAAGACCAGTTGAAATCGAATTTAAAATTAAGGAATAAAAATATAACAATTTGAAATATAAGGATGAAGTAAAAGCTAATAAATAAAAGTATTTTCCTTGATTTGCCTTCAACAACGAAAAATTGAAACATACTATGTTATTTATTCAATAGATATCTTAGTCTTGTCAATTTGGATGGAGCCCTACTCATACTAATAAATAAATACACTTCTTTTAATTTCCTCCAGAAAAGAAAAATTGAAACCGAAATATATATGTGGATACATCTTATTGATCTTAAGTATCTCATCTTTTTCGAAAGAAAGAAAAATTTGTCATATGCAAACTTACGATTTAGTAAGTTGCACAAAAATGAGCGTAATTTAAAATATATTCACCTTCTTTATTCACCAACTTTTCGTAAAAGAAGAAGATAGGTAAAAGAAGAAGATAGATTAGTGTGATGATAAATACCTAATTTAGATGCAGTTATTATATTATTAATTTTCTAACAAACATTTTAATTTAATACAACCACTATCAGCTGTTACTTTAAAAAGTATTACATATCAAACAATTAACCTTTTTTTTTTTTCTTCATTATATAGTAACAAAACATCTCATCTAGAAATTAATTTCGCAATAACTTCATAGTGATCCTTTTCCCCTTCCAAAACAACATAATTTTCAAGGAAATTTCCATGCAATTTCGAGTAGGGTCTTTTGCAATTTCTTCAAAAATTTTCCAAAAGACTTTTACACACTTATTCACACATATATATAATATCCCTTTCTATATAATATTTATATCACCATTCATGCTTCCTTCCTAACCACTAAATTTACCAAAATGGCCATTTCATCCATTTCCATTCCCTTCAAATGGTTTACCAAAACCAATTTCAAGCTCAATTTCCCTCTCCTTCACTCCAAACACAAACCAACTTCCACTAAACCTCCTACGCCGCTGCCCCTTGCCGAGGTCGCTTTTCGCCATCTCGACGTCAATGGAGATGGAAAAATCTCTGGCGACGAACTACGATCCTACTTTGCATCGATAGGCGAGTACATGACATGGGATGATGCTCGAAGTGTGATTGGAGATTTTGACGGAGACGGTGACGAGTTACTAGAGCTTGGAGATTTCGAGCGACTCATAAAGGGAGAGGAGGAGGAGGAGGATTTGAAAAGGGCTTTTGAGATGTTTGAAGGTGAAAAGGGATGTGGATTCATTGGGGCAACGGGATTGCAAAAGATGTTTGGGAGGCTTGGATACGTGAAATCAAAAGAAGAGTGCATGGCTATGATCAAAGTGTTTGATGTTGATGGCGATGGTGTAATTGATTATCATGAATTTCTTAGAATGATGACTTGACTATCTAATTTAACGTCCTAATAAGTTGTCTTTTGATTTTCTCTTTTGTTTGTTTCTTTTTTCCGTTTCTTGGTGAATGTTAATGAAAATTGTGATCGTAAATTTGAGGGGTGTTTTCTTT

Coding sequence (CDS)

ATGGCCATTTCATCCATTTCCATTCCCTTCAAATGGTTTACCAAAACCAATTTCAAGCTCAATTTCCCTCTCCTTCACTCCAAACACAAACCAACTTCCACTAAACCTCCTACGCCGCTGCCCCTTGCCGAGGTCGCTTTTCGCCATCTCGACGTCAATGGAGATGGAAAAATCTCTGGCGACGAACTACGATCCTACTTTGCATCGATAGGCGAGTACATGACATGGGATGATGCTCGAAGTGTGATTGGAGATTTTGACGGAGACGGTGACGAGTTACTAGAGCTTGGAGATTTCGAGCGACTCATAAAGGGAGAGGAGGAGGAGGAGGATTTGAAAAGGGCTTTTGAGATGTTTGAAGGTGAAAAGGGATGTGGATTCATTGGGGCAACGGGATTGCAAAAGATGTTTGGGAGGCTTGGATACGTGAAATCAAAAGAAGAGTGCATGGCTATGATCAAAGTGTTTGATGTTGATGGCGATGGTGTAATTGATTATCATGAATTTCTTAGAATGATGACTTGA

Protein sequence

MAISSISIPFKWFTKTNFKLNFPLLHSKHKPTSTKPPTPLPLAEVAFRHLDVNGDGKISGDELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDFERLIKGEEEEEDLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVIDYHEFLRMMT

Homology

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BLAST of PI0028960 vs. ExPASy Swiss-Prot
Match: Q8L3R2 (Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 PE=2 SV=2)

HSP 1 Score: 125.9 bits (315), Expect = 4.3e-28
Identity = 77/192 (40.10%), Postives = 103/192 (53.65%), Query Frame = 0


Query: 10  FKWFTKTNFKLNFPLLHSKHKPTSTKPPT---PLPLAE----------------VAFRHL 69
           FKWF+    KLN    + +  P S    T   P   ++                  F H 
Sbjct: 13  FKWFSTKTLKLNLSFQNRRRSPKSNSSSTLNSPRSNSDDNNNIKSHQASKEELRQVFSHF 72

Query: 70  DVNGDGKISGDELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDF-----ERLIKG 129
           D +GDGKIS  ELR YF S+GEY++ + A+  I + D D D  L   DF      R + G
Sbjct: 73  DSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFEDFVGLMTRRDLYG 132

Query: 130 EEE---EEDLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDG 175
           + E   + +LK AFEMFE EKG G I   GLQKM  +LG  ++  EC AMIK +D+DG+G
Sbjct: 133 DGEVDGDGELKTAFEMFEVEKGSGCITPKGLQKMLVKLGESRTYGECEAMIKFYDIDGNG 192

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BLAST of PI0028960 vs. ExPASy Swiss-Prot
Match: O22845 (Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 3.1e-18
Identity = 65/181 (35.91%), Postives = 93/181 (51.38%), Query Frame = 0


Query: 9   PFKWFTKTNFKLNFPLLHSK-HKPTSTKPPT----PLPLAEVAFRHLDVNGDGKISGDEL 68
           P  WF KT  K + P   +    P+S+  PT    P  L  V F+  D NGDG+I+ +EL
Sbjct: 28  PLSWFDKTLHKNSPPSPSTMLPSPSSSSAPTKRIDPSELKRV-FQMFDKNGDGRITKEEL 87

Query: 69  RSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDFERLIK---------GEEEEEDLKR 128
                ++G Y+   D   +I   D +GD  +++ +FE L           GE EEED+K 
Sbjct: 88  NDSLENLGIYIPDKDLTQMIHKIDANGDGCVDIDEFESLYSSIVDEHHNDGETEEEDMKD 147

Query: 129 AFEMFEGEKGCGFIGATGLQKMFGRLGYVKSK--EECMAMIKVFDVDGDGVIDYHEFLRM 174
           AF +F+ + G GFI    L+ +   LG  + K  + C  MI   D DGDG ++Y EFL+M
Sbjct: 148 AFNVFD-QDGDGFITVEELKSVMASLGLKQGKTLDGCKKMIMQVDADGDGRVNYKEFLQM 206

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BLAST of PI0028960 vs. ExPASy Swiss-Prot
Match: Q9SRE6 (Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-17
Identity = 49/133 (36.84%), Postives = 81/133 (60.90%), Query Frame = 0


Query: 44  EVAFRHLDVNGDGKISGDELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDFERLI 103
           E  F ++D N DG+IS +EL+  F ++GE ++ ++A + +   D DGD +L+  +F +LI
Sbjct: 45  EAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLI 104

Query: 104 KGEEEEE---DLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEECMAMIKVFDVDG 163
           K ++EEE   +LK AF ++  E G   I    L+ M  +LG  ++ ++C  MI  FD++ 
Sbjct: 105 KVDDEEEKKMELKGAFRLYIAE-GEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNA 164

Query: 164 DGVIDYHEFLRMM 174
           DGV+ + EF  MM
Sbjct: 165 DGVLSFDEFALMM 176

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BLAST of PI0028960 vs. ExPASy Swiss-Prot
Match: Q9SRE7 (Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-17
Identity = 51/136 (37.50%), Postives = 82/136 (60.29%), Query Frame = 0


Query: 44  EVAFRHLDVNGDGKISGDELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDFERLI 103
           E  F ++D N DG+IS +EL+  F ++GE M+ ++A + +   D DGD +L++ +F  LI
Sbjct: 24  EAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLI 83

Query: 104 KGEEE--EEDLKR----AFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEECMAMIKVFD 163
           KG +E  EE+ KR    AF M+  + G   I    L+ M  +LG  ++ ++C  MI+ FD
Sbjct: 84  KGNDEFTEEEKKRKIMEAFRMYIAD-GEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFD 143

Query: 164 VDGDGVIDYHEFLRMM 174
           ++ DGV+ + EF  MM
Sbjct: 144 LNADGVLSFDEFALMM 158

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BLAST of PI0028960 vs. ExPASy Swiss-Prot
Match: Q9SU00 (Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.4e-17
Identity = 46/133 (34.59%), Postives = 82/133 (61.65%), Query Frame = 0


Query: 47  FRHLDVNGDGKISGDELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDF----ERL 106
           F+  D NGDGKI+ +EL+ +F S+G  +  ++   +I   D +GD  +++ +F    + +
Sbjct: 10  FQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDIDEFGSLYQEM 69

Query: 107 IKGEEEEEDLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSK--EECMAMIKVFDVDG 166
           ++ +EEEED++ AF +F+ + G GFI    L+ +   +G  + +  E+C  MI   DVDG
Sbjct: 70  VEEKEEEEDMREAFRVFD-QNGDGFITDEELRSVLASMGLKQGRTLEDCKKMISKVDVDG 129

Query: 167 DGVIDYHEFLRMM 174
           DG++++ EF +MM
Sbjct: 130 DGMVNFKEFKQMM 141

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BLAST of PI0028960 vs. ExPASy TrEMBL
Match: A0A5A7UHX6 (Putative calcium-binding protein CML41 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27333G00010 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.5e-87
Identity = 161/176 (91.48%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MAISSISIPFKWFTKTNFKLNFPLLHSKHKPTSTKPPTPLPLAEVAFRHLDVNGDGKISG 60
           MAIS+I+IPFKWFTKTNFKLNFPLLHSKHKP S+KPPTP PLAEVAFRHLD++GDGKISG
Sbjct: 1   MAISTIAIPFKWFTKTNFKLNFPLLHSKHKPISSKPPTPPPLAEVAFRHLDIDGDGKISG 60

Query: 61  DELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDFERLIKGEEE--EEDLKRAFEM 120
           DELRSYFASIGEYMTWD A+SVIGDFD DGDELLELGDFERL+KGEEE  EEDLKRAFEM
Sbjct: 61  DELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEEDLKRAFEM 120

Query: 121 FEGEKGCGFIGATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVIDYHEFLRMMT 175
           FEGEKGCGFIGATGLQKMFGRLGYVKSKE+CM MIKVFDVDGDGVIDYHEFLRMMT
Sbjct: 121 FEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFLRMMT 176

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BLAST of PI0028960 vs. ExPASy TrEMBL
Match: A0A1S3CT00 (probable calcium-binding protein CML41 OS=Cucumis melo OX=3656 GN=LOC103503982 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.5e-87
Identity = 161/176 (91.48%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MAISSISIPFKWFTKTNFKLNFPLLHSKHKPTSTKPPTPLPLAEVAFRHLDVNGDGKISG 60
           MAIS+I+IPFKWFTKTNFKLNFPLLHSKHKP S+KPPTP PLAEVAFRHLD++GDGKISG
Sbjct: 1   MAISTIAIPFKWFTKTNFKLNFPLLHSKHKPISSKPPTPPPLAEVAFRHLDIDGDGKISG 60

Query: 61  DELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDFERLIKGEEE--EEDLKRAFEM 120
           DELRSYFASIGEYMTWD A+SVIGDFD DGDELLELGDFERL+KGEEE  EEDLKRAFEM
Sbjct: 61  DELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEEDLKRAFEM 120

Query: 121 FEGEKGCGFIGATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVIDYHEFLRMMT 175
           FEGEKGCGFIGATGLQKMFGRLGYVKSKE+CM MIKVFDVDGDGVIDYHEFLRMMT
Sbjct: 121 FEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFLRMMT 176

[Close]

BLAST of PI0028960 vs. ExPASy TrEMBL
Match: A0A0A0LG17 (Calmodulin OS=Cucumis sativus OX=3659 GN=Csa_3G854250 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.9e-83
Identity = 161/180 (89.44%), Postives = 169/180 (93.89%), Query Frame = 0


Query: 1   MAISSIS-IPFKWFTKTNFKLNFPLLHSKHKPTSTKP----PTPLPLAEVAFRHLDVNGD 60
           MAISSI+ IPFKWFTKTNFKLNFPLLHSKHKPTS+KP    P P PLAEVAFRHLDV+GD
Sbjct: 1   MAISSIAVIPFKWFTKTNFKLNFPLLHSKHKPTSSKPSTSGPGPRPLAEVAFRHLDVDGD 60

Query: 61  GKISGDELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDFERLIKG-EEEEEDLKR 120
           GKIS +EL+SYFASIGEYMTW+DARSVIGDFD DGDELLELGDFER++KG EEEEEDLKR
Sbjct: 61  GKISCNELQSYFASIGEYMTWNDARSVIGDFDRDGDELLELGDFERMVKGEEEEEEDLKR 120

Query: 121 AFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVIDYHEFLRMMT 175
           AFEMFEGEKGCGFI ATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVIDYHEFLRMMT
Sbjct: 121 AFEMFEGEKGCGFIEATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVIDYHEFLRMMT 180

[Close]

BLAST of PI0028960 vs. ExPASy TrEMBL
Match: A0A6J1IIY2 (probable calcium-binding protein CML41 OS=Cucurbita maxima OX=3661 GN=LOC111473738 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.3e-72
Identity = 143/184 (77.72%), Postives = 153/184 (83.15%), Query Frame = 0


Query: 1   MAISSISIPFKWFTKTNFKLNFPLLHSKHKPTSTKPPTP--------LPLAEVAFRHLDV 60
           MA+S IS PFKWF+ TNFKLNFP L  KHKPT + PP P         PLAE AFRHLD 
Sbjct: 15  MALSPISTPFKWFSNTNFKLNFPRLRFKHKPTPSNPPPPPLLLLTPAPPLAEAAFRHLDA 74

Query: 61  NGDGKISGDELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDFERLIKG--EEEEE 120
           +GDGKISGDEL+SYFAS+GEYMT DDARS+I +FDGDGD LLELGDFERL+KG  EEE+E
Sbjct: 75  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE 134

Query: 121 DLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVIDYHEFL 175
           DLK AFEMFEGEKGCGFIG  GLQKMFGRLGYVKS EECMAMI VFDVDGDGVIDY EFL
Sbjct: 135 DLKMAFEMFEGEKGCGFIGPPGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 194

[Close]

BLAST of PI0028960 vs. ExPASy TrEMBL
Match: A0A6J1F7Y7 (probable calcium-binding protein CML41 OS=Cucurbita moschata OX=3662 GN=LOC111442970 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.6e-71
Identity = 140/183 (76.50%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MAISSISIPFKWFTKTNFKLNFPLLHSKHKPTSTKPPTP-------LPLAEVAFRHLDVN 60
           MA+S IS PFKWF+ TN KLN P L  KHKPT + PP P        PLAE AFRHLD +
Sbjct: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLTPAPPLAEAAFRHLDAD 60

Query: 61  GDGKISGDELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDFERLIKG--EEEEED 120
           GDGKISGDEL+SYFAS+GEYMT DDARS+I +FDGDGD LLELGDFERL+KG  +EE+ED
Sbjct: 61  GDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEQEEKED 120

Query: 121 LKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVIDYHEFLR 175
           LKRAFEMFEGEKGCGFIG  GLQKMFGRLGYVKS EECMAMI VFDVDG+GVIDY EFLR
Sbjct: 121 LKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGNGVIDYREFLR 180

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BLAST of PI0028960 vs. NCBI nr
Match: XP_008466624.1 (PREDICTED: probable calcium-binding protein CML41 [Cucumis melo] >KAA0055432.1 putative calcium-binding protein CML41 [Cucumis melo var. makuwa])

HSP 1 Score: 332.0 bits (850), Expect = 3.0e-87
Identity = 161/176 (91.48%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MAISSISIPFKWFTKTNFKLNFPLLHSKHKPTSTKPPTPLPLAEVAFRHLDVNGDGKISG 60
           MAIS+I+IPFKWFTKTNFKLNFPLLHSKHKP S+KPPTP PLAEVAFRHLD++GDGKISG
Sbjct: 1   MAISTIAIPFKWFTKTNFKLNFPLLHSKHKPISSKPPTPPPLAEVAFRHLDIDGDGKISG 60

Query: 61  DELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDFERLIKGEEE--EEDLKRAFEM 120
           DELRSYFASIGEYMTWD A+SVIGDFD DGDELLELGDFERL+KGEEE  EEDLKRAFEM
Sbjct: 61  DELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEEDLKRAFEM 120

Query: 121 FEGEKGCGFIGATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVIDYHEFLRMMT 175
           FEGEKGCGFIGATGLQKMFGRLGYVKSKE+CM MIKVFDVDGDGVIDYHEFLRMMT
Sbjct: 121 FEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFLRMMT 176

[Close]

BLAST of PI0028960 vs. NCBI nr
Match: XP_004147818.1 (probable calcium-binding protein CML41 [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 5.9e-83
Identity = 161/180 (89.44%), Postives = 169/180 (93.89%), Query Frame = 0


Query: 1   MAISSIS-IPFKWFTKTNFKLNFPLLHSKHKPTSTKP----PTPLPLAEVAFRHLDVNGD 60
           MAISSI+ IPFKWFTKTNFKLNFPLLHSKHKPTS+KP    P P PLAEVAFRHLDV+GD
Sbjct: 1   MAISSIAVIPFKWFTKTNFKLNFPLLHSKHKPTSSKPSTSGPGPRPLAEVAFRHLDVDGD 60

Query: 61  GKISGDELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDFERLIKG-EEEEEDLKR 120
           GKIS +EL+SYFASIGEYMTW+DARSVIGDFD DGDELLELGDFER++KG EEEEEDLKR
Sbjct: 61  GKISCNELQSYFASIGEYMTWNDARSVIGDFDRDGDELLELGDFERMVKGEEEEEEDLKR 120

Query: 121 AFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVIDYHEFLRMMT 175
           AFEMFEGEKGCGFI ATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVIDYHEFLRMMT
Sbjct: 121 AFEMFEGEKGCGFIEATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVIDYHEFLRMMT 180

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BLAST of PI0028960 vs. NCBI nr
Match: KAE8651319.1 (hypothetical protein Csa_001024 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 1.6e-75
Identity = 149/170 (87.65%), Postives = 158/170 (92.94%), Query Frame = 0


Query: 1   MAISSIS-IPFKWFTKTNFKLNFPLLHSKHKPTSTKP----PTPLPLAEVAFRHLDVNGD 60
           MAISSI+ IPFKWFTKTNFKLNFPLLHSKHKPTS+KP    P P PLAEVAFRHLDV+GD
Sbjct: 1   MAISSIAVIPFKWFTKTNFKLNFPLLHSKHKPTSSKPSTSGPGPRPLAEVAFRHLDVDGD 60

Query: 61  GKISGDELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDFERLIKG-EEEEEDLKR 120
           GKIS +EL+SYFASIGEYMTW+DARSVIGDFD DGDELLELGDFER++KG EEEEEDLKR
Sbjct: 61  GKISCNELQSYFASIGEYMTWNDARSVIGDFDRDGDELLELGDFERMVKGEEEEEEDLKR 120

Query: 121 AFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVI 165
           AFEMFEGEKGCGFI ATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDG +
Sbjct: 121 AFEMFEGEKGCGFIEATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGEV 170

[Close]

BLAST of PI0028960 vs. NCBI nr
Match: XP_038905487.1 (probable calcium-binding protein CML41 [Benincasa hispida])

HSP 1 Score: 290.8 bits (743), Expect = 7.7e-75
Identity = 149/175 (85.14%), Postives = 158/175 (90.29%), Query Frame = 0


Query: 1   MAISSISIPFKWFTKTNFKLNFPLLHSKHKPTSTKPPTPLPLAEVAFRHLDVNGDGKISG 60
           MAIS+ISIP KWF+    KLNFP LHSKHKPTS+KPP+ LPLAEVAFRHLDV+GDGKIS 
Sbjct: 1   MAISTISIPLKWFST---KLNFPRLHSKHKPTSSKPPS-LPLAEVAFRHLDVDGDGKISS 60

Query: 61  DELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDFERLIKG--EEEEEDLKRAFEM 120
           DELR+YFASIGEYMT D A+SVIGDFD DGDELLELGDF+RL+KG  EEEEEDLKRAFEM
Sbjct: 61  DELRTYFASIGEYMTRDGAQSVIGDFDEDGDELLELGDFQRLVKGEEEEEEEDLKRAFEM 120

Query: 121 FEGEKGCGFIGATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVIDYHEFLRMM 174
           FEGEKGCGFIG  GLQKMFGRLGYVKSKEEC AMIKVFDVDGDGVIDY EFLRMM
Sbjct: 121 FEGEKGCGFIGPAGLQKMFGRLGYVKSKEECSAMIKVFDVDGDGVIDYREFLRMM 171

[Close]

BLAST of PI0028960 vs. NCBI nr
Match: XP_022974919.1 (probable calcium-binding protein CML41 [Cucurbita maxima])

HSP 1 Score: 281.6 bits (719), Expect = 4.7e-72
Identity = 143/184 (77.72%), Postives = 153/184 (83.15%), Query Frame = 0


Query: 1   MAISSISIPFKWFTKTNFKLNFPLLHSKHKPTSTKPPTP--------LPLAEVAFRHLDV 60
           MA+S IS PFKWF+ TNFKLNFP L  KHKPT + PP P         PLAE AFRHLD 
Sbjct: 15  MALSPISTPFKWFSNTNFKLNFPRLRFKHKPTPSNPPPPPLLLLTPAPPLAEAAFRHLDA 74

Query: 61  NGDGKISGDELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDFERLIKG--EEEEE 120
           +GDGKISGDEL+SYFAS+GEYMT DDARS+I +FDGDGD LLELGDFERL+KG  EEE+E
Sbjct: 75  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE 134

Query: 121 DLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVIDYHEFL 175
           DLK AFEMFEGEKGCGFIG  GLQKMFGRLGYVKS EECMAMI VFDVDGDGVIDY EFL
Sbjct: 135 DLKMAFEMFEGEKGCGFIGPPGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 194

[Close]

BLAST of PI0028960 vs. TAIR 10
Match: AT3G50770.1 (calmodulin-like 41 )

HSP 1 Score: 125.9 bits (315), Expect = 3.1e-29
Identity = 77/192 (40.10%), Postives = 103/192 (53.65%), Query Frame = 0


Query: 10  FKWFTKTNFKLNFPLLHSKHKPTSTKPPT---PLPLAE----------------VAFRHL 69
           FKWF+    KLN    + +  P S    T   P   ++                  F H 
Sbjct: 13  FKWFSTKTLKLNLSFQNRRRSPKSNSSSTLNSPRSNSDDNNNIKSHQASKEELRQVFSHF 72

Query: 70  DVNGDGKISGDELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDF-----ERLIKG 129
           D +GDGKIS  ELR YF S+GEY++ + A+  I + D D D  L   DF      R + G
Sbjct: 73  DSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFEDFVGLMTRRDLYG 132

Query: 130 EEE---EEDLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDG 175
           + E   + +LK AFEMFE EKG G I   GLQKM  +LG  ++  EC AMIK +D+DG+G
Sbjct: 133 DGEVDGDGELKTAFEMFEVEKGSGCITPKGLQKMLVKLGESRTYGECEAMIKFYDIDGNG 192

[Close]

BLAST of PI0028960 vs. TAIR 10
Match: AT2G43290.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 93.2 bits (230), Expect = 2.2e-19
Identity = 65/181 (35.91%), Postives = 93/181 (51.38%), Query Frame = 0


Query: 9   PFKWFTKTNFKLNFPLLHSK-HKPTSTKPPT----PLPLAEVAFRHLDVNGDGKISGDEL 68
           P  WF KT  K + P   +    P+S+  PT    P  L  V F+  D NGDG+I+ +EL
Sbjct: 28  PLSWFDKTLHKNSPPSPSTMLPSPSSSSAPTKRIDPSELKRV-FQMFDKNGDGRITKEEL 87

Query: 69  RSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDFERLIK---------GEEEEEDLKR 128
                ++G Y+   D   +I   D +GD  +++ +FE L           GE EEED+K 
Sbjct: 88  NDSLENLGIYIPDKDLTQMIHKIDANGDGCVDIDEFESLYSSIVDEHHNDGETEEEDMKD 147

Query: 129 AFEMFEGEKGCGFIGATGLQKMFGRLGYVKSK--EECMAMIKVFDVDGDGVIDYHEFLRM 174
           AF +F+ + G GFI    L+ +   LG  + K  + C  MI   D DGDG ++Y EFL+M
Sbjct: 148 AFNVFD-QDGDGFITVEELKSVMASLGLKQGKTLDGCKKMIMQVDADGDGRVNYKEFLQM 206

[Close]

BLAST of PI0028960 vs. TAIR 10
Match: AT1G76640.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-18
Identity = 51/136 (37.50%), Postives = 82/136 (60.29%), Query Frame = 0


Query: 44  EVAFRHLDVNGDGKISGDELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDFERLI 103
           E  F ++D N DG+IS +EL+  F ++GE M+ ++A + +   D DGD +L++ +F  LI
Sbjct: 24  EAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLI 83

Query: 104 KGEEE--EEDLKR----AFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEECMAMIKVFD 163
           KG +E  EE+ KR    AF M+  + G   I    L+ M  +LG  ++ ++C  MI+ FD
Sbjct: 84  KGNDEFTEEEKKRKIMEAFRMYIAD-GEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFD 143

Query: 164 VDGDGVIDYHEFLRMM 174
           ++ DGV+ + EF  MM
Sbjct: 144 LNADGVLSFDEFALMM 158

[Close]

BLAST of PI0028960 vs. TAIR 10
Match: AT1G76650.1 (calmodulin-like 38 )

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-18
Identity = 49/133 (36.84%), Postives = 81/133 (60.90%), Query Frame = 0


Query: 44  EVAFRHLDVNGDGKISGDELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDFERLI 103
           E  F ++D N DG+IS +EL+  F ++GE ++ ++A + +   D DGD +L+  +F +LI
Sbjct: 45  EAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLI 104

Query: 104 KGEEEEE---DLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEECMAMIKVFDVDG 163
           K ++EEE   +LK AF ++  E G   I    L+ M  +LG  ++ ++C  MI  FD++ 
Sbjct: 105 KVDDEEEKKMELKGAFRLYIAE-GEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNA 164

Query: 164 DGVIDYHEFLRMM 174
           DGV+ + EF  MM
Sbjct: 165 DGVLSFDEFALMM 176

[Close]

BLAST of PI0028960 vs. TAIR 10
Match: AT1G76650.3 (calmodulin-like 38 )

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-18
Identity = 49/133 (36.84%), Postives = 81/133 (60.90%), Query Frame = 0


Query: 44  EVAFRHLDVNGDGKISGDELRSYFASIGEYMTWDDARSVIGDFDGDGDELLELGDFERLI 103
           E  F ++D N DG+IS +EL+  F ++GE ++ ++A + +   D DGD +L+  +F +LI
Sbjct: 45  EAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLI 104

Query: 104 KGEEEEE---DLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEECMAMIKVFDVDG 163
           K ++EEE   +LK AF ++  E G   I    L+ M  +LG  ++ ++C  MI  FD++ 
Sbjct: 105 KVDDEEEKKMELKGAFRLYIAE-GEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNA 164

Query: 164 DGVIDYHEFLRMM 174
           DGV+ + EF  MM
Sbjct: 165 DGVLSFDEFALMM 176

The following BLAST results are available for this feature:

BLAST of PI0028960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3R2	4.3e-28	40.10	Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 ...	[more]
O22845	3.1e-18	35.91	Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2	[more]
Q9SRE6	1.5e-17	36.84	Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1	[more]
Q9SRE7	1.5e-17	37.50	Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1	[more]
Q9SU00	3.4e-17	34.59	Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1	[more]

BLAST of PI0028960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UHX6	1.5e-87	91.48	Putative calcium-binding protein CML41 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CT00	1.5e-87	91.48	probable calcium-binding protein CML41 OS=Cucumis melo OX=3656 GN=LOC103503982 P...	[more]
A0A0A0LG17	2.9e-83	89.44	Calmodulin OS=Cucumis sativus OX=3659 GN=Csa_3G854250 PE=4 SV=1	[more]
A0A6J1IIY2	2.3e-72	77.72	probable calcium-binding protein CML41 OS=Cucurbita maxima OX=3661 GN=LOC1114737...	[more]
A0A6J1F7Y7	5.6e-71	76.50	probable calcium-binding protein CML41 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]

BLAST of PI0028960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466624.1	3.0e-87	91.48	PREDICTED: probable calcium-binding protein CML41 [Cucumis melo] >KAA0055432.1 p...	[more]
XP_004147818.1	5.9e-83	89.44	probable calcium-binding protein CML41 [Cucumis sativus]	[more]
KAE8651319.1	1.6e-75	87.65	hypothetical protein Csa_001024 [Cucumis sativus]	[more]
XP_038905487.1	7.7e-75	85.14	probable calcium-binding protein CML41 [Benincasa hispida]	[more]
XP_022974919.1	4.7e-72	77.72	probable calcium-binding protein CML41 [Cucurbita maxima]	[more]

BLAST of PI0028960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50770.1	3.1e-29	40.10	calmodulin-like 41	[more]
AT2G43290.1	2.2e-19	35.91	Calcium-binding EF-hand family protein	[more]
AT1G76640.1	1.1e-18	37.50	Calcium-binding EF-hand family protein	[more]
AT1G76650.1	1.1e-18	36.84	calmodulin-like 38	[more]
AT1G76650.3	1.1e-18	36.84	calmodulin-like 38	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 42..70 e-value: 0.0016 score: 27.7 coord: 148..174 e-value: 0.0088 score: 25.2 coord: 78..106 e-value: 30.0 score: 5.9
IPR002048	EF-hand domain	PFAM	PF00036	EF-hand_1	coord: 148..174 e-value: 2.3E-8 score: 33.0
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 46..103 e-value: 7.3E-8 score: 32.7
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 38..73 score: 12.923368
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 144..174 score: 15.629221
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 43..104 e-value: 1.01189E-9 score: 50.2389
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 111..174 e-value: 1.73022E-10 score: 52.1649
None	No IPR available	GENE3D	1.10.238.10		coord: 15..105 e-value: 1.6E-12 score: 49.7
None	No IPR available	GENE3D	1.10.238.10		coord: 106..174 e-value: 6.1E-17 score: 63.4
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 40..174
None	No IPR available	PANTHER	PTHR23050:SF393	CALMODULIN	coord: 40..174
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 51..63
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 157..169
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 45..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028960.1	PI0028960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050790	regulation of catalytic activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0030234	enzyme regulator activity