PI0028927 (gene) Melon (PI 482460) v1

Overview


Name	PI0028927
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	protein LOW PSII ACCUMULATION 3, chloroplastic
Location	chr01: 26834758 .. 26839530 (-)
RNA-Seq Expression	PI0028927
Synteny	PI0028927

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATCATGGCGTTTCTCTCTTCACCACCCCACATTCCCTCTCTTTCTCGACCGTTTCATAGCAACTTTCTCTTCTCTCCCATTTCCTCTTCCTTACGCCGTTCTACTCGATCCAGTTTATTTGGCGCTCAAACTTTGGCGGCTTCGGGATTTTGCTTTAGAATACACTGTCGTGACAAAGAACGAGCTGCACCGGTTACTCAGAGCTCCGATCCTAAGGCTGGAGTTCCGATTTATAAGCCCAAAACCTACGAGGTGTTAGTCTCCGATGCTGCGAATTCTCTTGCTTATGCTCTGGAAGATGGAAAGATGCGGTTGGAGATTGATTTCCCGTAATCTTTCTTTTTCTCTATGAATATTGATGGTCTTACTTTTCAGTTCTATTAGGCTCTTTCTTTTGAGAAATGCTGTCCATTCCTTCAATTTGTAACTTGGCAAGTTAGCATCAGAGTTACTACTACCATGCTGTACGTTTGTTTTCGTCTCTTCTAATCCTCATTCCTCAAGTATCGTAATTGGTTGGGCTTTTGTTAAGATAATCTAGTGGGTTTAATTTCGGAGCTTCCTTCTTGCAGAGGACCCAATTTAAAATTTGAAACTGAGATTCCAACCGTAGTCCGTTTAGGTAAATTGTTCGTGCGATGATCGAGTAGTTCCTTCTCCATCTGCCTTTTAGGAAGAAAAGCAGCTTATTATGGGTTGTTAGGGGAGAGGAGAGACAGTGTTTTAGAGGTGTGGTCGTTGGAGTTTAGTTTCAAAGGCTTTTTGTAATTATTCTTTTAAGTAGAATCTTATATAGTTGAAACCCTTTTTAAGATGGGATTTCGCAGACTTGATTTTTTGTAGTAGTAAATTGTTTCTGAACATCTTTGCAGCTTATGAGAAGTAACAATATCCTTTGCTTTAGTGTCGGAATTGGTTTATTCTCGAATTTATTATCTAGTTCTTCATAGTATAATTTTCATTGTTTTCTAATCTTGTTTTTTCTTTTTGTCCTTTTTGGTGGGATTTCCCATATTCAGACCCCTGCCTAGCAACATTTCTTCATATAAGGTATCTTTCTCCAGCATGTTCTTAATGGAATTTTCTGCTTAGAACATTTTGTTTTCTCATTTATTAAAATATTCCTCATATAGGCTTTTCCCCCCTATACATACGGAAACCCAGTCTGTTTTGCAGCTCGTATTAGTTCTTGATTTTGAATGTACTCATTTAAAATAGGTCATAGGGTCATTTTATAATGTCCAAGAATTTTATGTTTGTGTATTTTTCTTGTATGAGCGAGCCATGAACATTAAGACTGTACTATTCTGTGCGATGAAACCAGTTGAAAAGAAGTTGTGAATAGTAAACCATGAGATATGGGTAAATTAAATGTGCCACCAAGATTTAACACTTGATGTACTAGAGCATGGGTTAGATTCAAAACTTTGTTGGTTTAGGTTCTTTTCAATATTCTCGATTGTTGATAGCATATGAATATTTGATTTGAGAAAATTTCTAAATATGTAAAGGGATCTTCAGATGAGTTCATTGATGCAAATATTCAACTGGCCCTAGCTGTTGCAAGGAATCTTCAAGAAAAGAGAGGAACTAGATCTTGCATTGTAAGCAACTATGTATATATACACACTTATATATTGCAAACCTCTTCTGAATTTTGTGCAGCTGTTAAAAACTCATGTTATAAATTTAGGTGTTTCCAGATAAGCCAGAGAAGCGCAGAGCTTCACAGTTGTTCAAAACAGCTCTTGACTCGGTAACTAGTTAACTCTTCAAACTCCTTTGTTTTGCTTCAATCGTAAGAAGTAAATATTTTGTTTAGGATAGTAAGAGTACGAAAAGAGAGGGAAGATGCGAACCAAGTGAAAAGATATTTCAGCAGAAACTCTTTGGTTGTCATTAATCGGTTAGATAAATAATTCTGGAGGATTTGGTAATAGCACTCCAAGAAAAAGGACATCCTAAAGATGTGAAAAAAAATTCTGTGTACTCCATGGAAAATTCTCCTATTTGTCTCAAATCAGTCCTTCCAAAGATATTGAAAAGAGCATCCACCCAAAGCCACAAATGCTTCATTTTAAGGGGGTTTTTCTTTTTAAAAAATGTATATTTGTTCCCACAATGATGAGGCTCTTTATTTGCTTGTGGCATTGTCCATAAAAAAAAGGGACAAGTTTAAGGTTTCAGCTTATTTATCACGAGAAGCATAGTGAATAAATGAAAGATTAAAAGCAACTCAAACCTAGAAGGTGAGTGGTTGCAGGCCAGATGTGCGTATACTAGCAGCAAAGATATGCATGAATTCAAGATTGTTCATGCCACTTAGATTGTTTAATATCCAGCATCTTCTCACATATATTTTAGTGTCACATAGTATAGTTGAAAAATAAATAAATAATCTGACGACACAATATAATTACTAGTAACAAATGATGTGAGCTAATCGAAGGCATGCTTGTCCACACAATATAAATCTTGGTCTCCGTTTTATATGCTCATTTGACTTCATTTTCCCCTTTTGTCTTTCAGATCGATGGTATAACTGTAAGTTCCCTGGACGATGTTCCTGCTGGAGCTGTCACATCTTTCTTCAGATCTGTTAGAAACACCCTTGATTTTGATTTTGAAGACGACAATGCAGGTTGGTTCTAAAGGCATGGATCTCACAAGATGTTTTACATTCTTATCCTCTTTTTTTTCTTCTTTTATTCTGTGCATGTCATGGCCATGTATTTCTCTATCAAATGCGTTTTACAAATATATGACATATTTTACGTGACCCTAACCATTATGGCAAGACTGCAACCTACGTTCATAGACTGTAAAAAACTTGATTTAGAAGAAAGAAAATGTCAGGAAATAAAAAGAAGAGCCAGAGGGAGAAAATATTGATGAGAGGAAAAAAAACTATATGAATTGTGATAGACCTTTATTCTCATATGAGAAAGCTATTTATTAACTTAAAACTACCTCTTCCAATGTATTTCACTTCACTTTTGAGGATATAAGCATGTTTCTTCTTCCTCAGCATGTTTGTATATTTCACATTGTAATCATCTTTTATTTTTTTACCTGCTTCTTTCCAGAACCAACATTCTCATTTAATGATCTCTCACTCTTTGCAATCCATCTGATTTGCAGGTCGTTGGACATCTAGTGACCCTCCATCTTTGTATATATTCATTAATTGTAGCACGCGTGAACTTGGTTTGATAGAGAAGTATGTGGTATGATGTCTATGCTAATTGCAAGATAGCAGTTTTTGAACCTTTGGCATACCTTGATTAGTTTCTGATTAAAAGTTTTCACGATTTCTTCTCTAATTGGTCACATTATGCTAATTTCCATTTTCAGTACAAATTATAATTTTTTTCTTAAAAATGTATTCCTCCCATCGATTATGATTCAGCTGTCGACAAAATACTGATATTTTAGATGCCTTGGGGTGAATTCTTATAATTATTTCCATTATATAAGCGACTTTTTTCATTGTGGGATTGATAGTTATAGAATGTTTTTTTCCAAACTTAGTGAGCACGAGCTGAGTAAGACATATTATTGACTTTCTAAGTGACATTTTTTGACACAATAGGTAATGTGTTTAGTTAACTTCATTTTCGGATTTGCAGGAAACTTTTGCTTCGTCAATCCCTACCCTGTTGTTTAATCTAGAACTTGAAACCTTGCGGTAATGGTCCTCTTCATCCATCTTTGAAAGATGCTTGGTTCATATATGCAACTAGTGATCAAAAGTTTGTAAACTTACAGTGCGGACTTGGGCTTACTGGGATTTCCCCCCAAAGATTTGCATTATCGATTTCTCTCTCAGTTTATCCCAGTGTTCTACGTTCGAATCAGAGAGTATTCTAAGGTCTTGGATCTCATCTTGGAACCCTTTCTAATTATATTGACATATATATGTTTTGACTAAATTCTCTATTCTTGGTTCTCTTTGTGGGAGGGATACCAAGACAGTAGCAGTAGCACCTTATATTGTTAATTACAGTGGAGCATTGTTTCGTCAATACCCTGGTGCGTCTACTGTTTGATTGAACTTGGTGTTGGAGATTTTTTTTTCTTTTTTTAATTCTCTTGATATCTTTCTCGGTCCAAATTGGTTCACCACCCACTTAAGTTTTGCTAGCTGAGTTTTAGATTCATCTGCTTTTTTACATCATTCTGTTGTCATTTCTATTCATCTTCATAATACTTTCAGGACCTTGGCAAGTGATGCTGAAACAATCTGATAATTCTTATGCCTGCGTTGCAGAGAGTGAAACAAGGTTCACCCTTGGTGAAGTATGTTAAACTAAAGTACTTTGAACTTTTAGCTGTTTTATCATTTGTCTGGTGTTTTTGGACTAACTGTTGCTCGTAATTTAGACCAAAGATGAACTACTGAGGGTCCTTGGACTACAGGAGGAGCAAGGAAGCTCACTAGAATTTCTCCGCAGGGGCTACAAGGTTCTCTCTTTGTATTTGTGATTCTGTTTTATATTTTTCCTTCTATATTTATTGCTACTTTTTCTCGTACTATTAATTCTTATTTGCTTCCTCACCAACCTACCAGAAATTTGAAGAGAAATCTGCTTCATATTTTGCTGCCTACGTTTTTTATTCAGTGAAATGATCCTTTATGAAGCTAACACTTCAAATCTGCTTCAATAAAATTATGGGATACTGTTGAAATCTAGTCTACTTTTGCAGGCTGCCACTTGGTGGGAAGAAGATGTTGATTCTGAAGTATCTTCCGCATGGCGTAGTTGA

mRNA sequence

ATGGCGATCATGGCGTTTCTCTCTTCACCACCCCACATTCCCTCTCTTTCTCGACCGTTTCATAGCAACTTTCTCTTCTCTCCCATTTCCTCTTCCTTACGCCGTTCTACTCGATCCAGTTTATTTGGCGCTCAAACTTTGGCGGCTTCGGGATTTTGCTTTAGAATACACTGTCGTGACAAAGAACGAGCTGCACCGGTTACTCAGAGCTCCGATCCTAAGGCTGGAGTTCCGATTTATAAGCCCAAAACCTACGAGGTGTTAGTCTCCGATGCTGCGAATTCTCTTGCTTATGCTCTGGAAGATGGAAAGATGCGGTTGGAGATTGATTTCCCACCCCTGCCTAGCAACATTTCTTCATATAAGGGATCTTCAGATGAGTTCATTGATGCAAATATTCAACTGGCCCTAGCTGTTGCAAGGAATCTTCAAGAAAAGAGAGGAACTAGATCTTGCATTGTGTTTCCAGATAAGCCAGAGAAGCGCAGAGCTTCACAGTTGTTCAAAACAGCTCTTGACTCGATCGATGGTATAACTGTAAGTTCCCTGGACGATGTTCCTGCTGGAGCTGTCACATCTTTCTTCAGATCTGTTAGAAACACCCTTGATTTTGATTTTGAAGACGACAATGCAGGTCGTTGGACATCTAGTGACCCTCCATCTTTGTATATATTCATTAATTGTAGCACGCGTGAACTTGGTTTGATAGAGAAGTATGTGGAAACTTTTGCTTCGTCAATCCCTACCCTGTTGTTTAATCTAGAACTTGAAACCTTGCGTGCGGACTTGGGCTTACTGGGATTTCCCCCCAAAGATTTGCATTATCGATTTCTCTCTCAGTTTATCCCAGTGTTCTACGTTCGAATCAGAGAGTATTCTAAGACAGTAGCAGTAGCACCTTATATTGTTAATTACAGTGGAGCATTGTTTCGTCAATACCCTGGACCTTGGCAAGTGATGCTGAAACAATCTGATAATTCTTATGCCTGCGTTGCAGAGAGTGAAACAAGGTTCACCCTTGGTGAAACCAAAGATGAACTACTGAGGGTCCTTGGACTACAGGAGGAGCAAGGAAGCTCACTAGAATTTCTCCGCAGGGGCTACAAGGCTGCCACTTGGTGGGAAGAAGATGTTGATTCTGAAGTATCTTCCGCATGGCGTAGTTGA

Coding sequence (CDS)

ATGGCGATCATGGCGTTTCTCTCTTCACCACCCCACATTCCCTCTCTTTCTCGACCGTTTCATAGCAACTTTCTCTTCTCTCCCATTTCCTCTTCCTTACGCCGTTCTACTCGATCCAGTTTATTTGGCGCTCAAACTTTGGCGGCTTCGGGATTTTGCTTTAGAATACACTGTCGTGACAAAGAACGAGCTGCACCGGTTACTCAGAGCTCCGATCCTAAGGCTGGAGTTCCGATTTATAAGCCCAAAACCTACGAGGTGTTAGTCTCCGATGCTGCGAATTCTCTTGCTTATGCTCTGGAAGATGGAAAGATGCGGTTGGAGATTGATTTCCCACCCCTGCCTAGCAACATTTCTTCATATAAGGGATCTTCAGATGAGTTCATTGATGCAAATATTCAACTGGCCCTAGCTGTTGCAAGGAATCTTCAAGAAAAGAGAGGAACTAGATCTTGCATTGTGTTTCCAGATAAGCCAGAGAAGCGCAGAGCTTCACAGTTGTTCAAAACAGCTCTTGACTCGATCGATGGTATAACTGTAAGTTCCCTGGACGATGTTCCTGCTGGAGCTGTCACATCTTTCTTCAGATCTGTTAGAAACACCCTTGATTTTGATTTTGAAGACGACAATGCAGGTCGTTGGACATCTAGTGACCCTCCATCTTTGTATATATTCATTAATTGTAGCACGCGTGAACTTGGTTTGATAGAGAAGTATGTGGAAACTTTTGCTTCGTCAATCCCTACCCTGTTGTTTAATCTAGAACTTGAAACCTTGCGTGCGGACTTGGGCTTACTGGGATTTCCCCCCAAAGATTTGCATTATCGATTTCTCTCTCAGTTTATCCCAGTGTTCTACGTTCGAATCAGAGAGTATTCTAAGACAGTAGCAGTAGCACCTTATATTGTTAATTACAGTGGAGCATTGTTTCGTCAATACCCTGGACCTTGGCAAGTGATGCTGAAACAATCTGATAATTCTTATGCCTGCGTTGCAGAGAGTGAAACAAGGTTCACCCTTGGTGAAACCAAAGATGAACTACTGAGGGTCCTTGGACTACAGGAGGAGCAAGGAAGCTCACTAGAATTTCTCCGCAGGGGCTACAAGGCTGCCACTTGGTGGGAAGAAGATGTTGATTCTGAAGTATCTTCCGCATGGCGTAGTTGA

Protein sequence

MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

Homology

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BLAST of PI0028927 vs. ExPASy Swiss-Prot
Match: Q8H0W0 (Protein LPA3 OS=Arabidopsis thaliana OX=3702 GN=LPA3 PE=1 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 1.2e-150
Identity = 252/321 (78.50%), Postives = 290/321 (90.34%), Query Frame = 0


Query: 68  TQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDE 127
           + +SDP+ GVP+YKPK+YEVL +DAANSLA+AL+D K RLEIDFPPLPS+ISSYKGSSD+
Sbjct: 38  SSNSDPRRGVPLYKPKSYEVLATDAANSLAFALQDSKSRLEIDFPPLPSSISSYKGSSDD 97

Query: 128 FIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVP 187
           FIDANIQLA+ V R LQEK  TR+CIVFPDKPEKRRASQ FK A DS+DGI++ SLDD+P
Sbjct: 98  FIDANIQLAVTVVRKLQEKIETRACIVFPDKPEKRRASQRFKAAFDSVDGISIGSLDDIP 157

Query: 188 AGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSI 247
             +VT+FFRS+R+TLDFDFED+N G W   +PP+LYIFINCSTREL  IEK+VETFASS 
Sbjct: 158 GTSVTNFFRSIRSTLDFDFEDENEGTWEPKEPPTLYIFINCSTRELSFIEKFVETFASST 217

Query: 248 PTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAPYIVNYSG 307
           P LLFNLEL+TLRADLGLLGFPPKDLHYRFLSQFIPVFY+R REYSKTVAVAP+++NY+G
Sbjct: 218 PALLFNLELDTLRADLGLLGFPPKDLHYRFLSQFIPVFYIRTREYSKTVAVAPFVLNYNG 277

Query: 308 ALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG 367
           ALFRQYPGPWQVMLKQ+D S+ACVAES TRFTLGETK+ELL+VLGLQEE+GSSLEFLRRG
Sbjct: 278 ALFRQYPGPWQVMLKQTDGSFACVAESPTRFTLGETKEELLQVLGLQEEKGSSLEFLRRG 337

Query: 368 YKAATWWEEDVDSEVSSAWRS 389
           YK+ATWWEEDV+ E SS WR+
Sbjct: 338 YKSATWWEEDVELEASSNWRN 358

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BLAST of PI0028927 vs. ExPASy TrEMBL
Match: A0A5A7UU42 (Protein LOW PSII ACCUMULATION 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001640 PE=4 SV=1)

HSP 1 Score: 761.9 bits (1966), Expect = 1.3e-216
Identity = 381/388 (98.20%), Postives = 385/388 (99.23%), Query Frame = 0


Query: 1   MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRD 60
           M IMAFLSSPP+IPSLSRPFHSNFLFSPISSSLRRST SSLFGAQTLAASGFCFRIHCRD
Sbjct: 1   MPIMAFLSSPPYIPSLSRPFHSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRD 60

Query: 61  KERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS 120
           KERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS
Sbjct: 61  KERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS 120

Query: 121 YKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITV 180
           YKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRAS+LFKTA+DSIDGITV
Sbjct: 121 YKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITV 180

Query: 181 SSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV 240
           SSLDDVPAG VTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV
Sbjct: 181 SSLDDVPAGPVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV 240

Query: 241 ETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAP 300
           ETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTVAVAP
Sbjct: 241 ETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP 300

Query: 301 YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSS 360
           YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSS
Sbjct: 301 YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSS 360

Query: 361 LEFLRRGYKAATWWEEDVDSEVSSAWRS 389
           LEFLRRGYKAATWWEEDVDSEVSSAWRS
Sbjct: 361 LEFLRRGYKAATWWEEDVDSEVSSAWRS 388

[Close]

BLAST of PI0028927 vs. ExPASy TrEMBL
Match: A0A1S3CFB8 (protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499841 PE=4 SV=1)

HSP 1 Score: 758.1 bits (1956), Expect = 1.8e-215
Identity = 379/388 (97.68%), Postives = 384/388 (98.97%), Query Frame = 0


Query: 1   MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRD 60
           M IMAF+SSPP+IPSLSRPF SNFLFSPISSSLRRST SSLFGAQTLAASGFCFRIHCRD
Sbjct: 1   MPIMAFISSPPYIPSLSRPFQSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRD 60

Query: 61  KERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS 120
           KERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS
Sbjct: 61  KERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS 120

Query: 121 YKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITV 180
           YKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRAS+LFKTA+DSIDGITV
Sbjct: 121 YKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITV 180

Query: 181 SSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV 240
           SSLDDVPAG VTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV
Sbjct: 181 SSLDDVPAGPVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV 240

Query: 241 ETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAP 300
           ETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTVAVAP
Sbjct: 241 ETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP 300

Query: 301 YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSS 360
           YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSS
Sbjct: 301 YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSS 360

Query: 361 LEFLRRGYKAATWWEEDVDSEVSSAWRS 389
           LEFLRRGYKAATWWEEDVDSEVSSAWRS
Sbjct: 361 LEFLRRGYKAATWWEEDVDSEVSSAWRS 388

[Close]

BLAST of PI0028927 vs. ExPASy TrEMBL
Match: A0A0A0KA03 (DUF1995 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G431980 PE=4 SV=1)

HSP 1 Score: 755.7 bits (1950), Expect = 9.2e-215
Identity = 379/388 (97.68%), Postives = 382/388 (98.45%), Query Frame = 0


Query: 1   MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRD 60
           MAIMAFLSSPPHIPSLS PFH+NFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHC D
Sbjct: 1   MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCLD 60

Query: 61  KERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS 120
           KERAAPVTQ SDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS
Sbjct: 61  KERAAPVTQRSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS 120

Query: 121 YKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITV 180
           YKGSSD+FIDANIQLALAVARNLQEKRG RSCIVFPDKPEKRRASQLFKTALDSIDGITV
Sbjct: 121 YKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITV 180

Query: 181 SSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV 240
           SSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV
Sbjct: 181 SSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV 240

Query: 241 ETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAP 300
           ETFASSIP LLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTVAVAP
Sbjct: 241 ETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP 300

Query: 301 YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSS 360
           YIVNYSGALFRQY GPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSS
Sbjct: 301 YIVNYSGALFRQYAGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSS 360

Query: 361 LEFLRRGYKAATWWEEDVDSEVSSAWRS 389
           LEFLRRGYKAATWWEEDVDSEVSSAWRS
Sbjct: 361 LEFLRRGYKAATWWEEDVDSEVSSAWRS 388

[Close]

BLAST of PI0028927 vs. ExPASy TrEMBL
Match: A0A6J1JTN7 (protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111488800 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 6.8e-210
Identity = 368/391 (94.12%), Postives = 380/391 (97.19%), Query Frame = 0


Query: 1   MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIH 60
           MAIMAFLSSPPHIPSL RPFHSNFLFSPISSS   LRRSTRSSLFGAQTLA SGFCFRIH
Sbjct: 1   MAIMAFLSSPPHIPSLVRPFHSNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIH 60

Query: 61  CRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSN 120
           C DKERAAPVT+SSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSN
Sbjct: 61  CSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSN 120

Query: 121 ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDG 180
           ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKP+K RASQLFKTALDSIDG
Sbjct: 121 ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSIDG 180

Query: 181 ITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIE 240
           IT+SSLDD+PAG VTSFFRS+RNTLDFDFED+NAGRWTSS+PPSLYIFINCSTREL +IE
Sbjct: 181 ITISSLDDIPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIE 240

Query: 241 KYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVA 300
           KYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTV 
Sbjct: 241 KYVETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVP 300

Query: 301 VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQ 360
           +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQ
Sbjct: 301 IAPYIVNYSGALFRQYPGPWQVMLKQTDNSYACVAESETRFTLGETKDELLRVLGLQEEQ 360

Query: 361 GSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 389
           GSSLEFLRRGYKAATWWEED DSEVSSAWRS
Sbjct: 361 GSSLEFLRRGYKAATWWEEDNDSEVSSAWRS 391

[Close]

BLAST of PI0028927 vs. ExPASy TrEMBL
Match: A0A6J1GQW6 (protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456648 PE=4 SV=1)

HSP 1 Score: 738.8 bits (1906), Expect = 1.2e-209
Identity = 368/391 (94.12%), Postives = 380/391 (97.19%), Query Frame = 0


Query: 1   MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIH 60
           MAIMAFLSSPPHIPSL RPFHSNFLFSPI+SS   LRRSTRSSLFGAQTLA SGFCFRIH
Sbjct: 1   MAIMAFLSSPPHIPSLVRPFHSNFLFSPIASSFSALRRSTRSSLFGAQTLATSGFCFRIH 60

Query: 61  CRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSN 120
           C DKERAAPVT+SSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSN
Sbjct: 61  CSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSN 120

Query: 121 ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDG 180
           ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKP+K RASQLFKTALDSIDG
Sbjct: 121 ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSIDG 180

Query: 181 ITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIE 240
           IT+SSLDDVPAG VTSFFRS+RNTLDFDFED+NAGRWTSS+PPSLYIFINCSTREL +IE
Sbjct: 181 ITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIE 240

Query: 241 KYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVA 300
           KYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTV 
Sbjct: 241 KYVETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVP 300

Query: 301 VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQ 360
           +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQ
Sbjct: 301 IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQ 360

Query: 361 GSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 389
           GSSLEFLRRGYKAATWWEED DSEVSSAWRS
Sbjct: 361 GSSLEFLRRGYKAATWWEEDNDSEVSSAWRS 391

[Close]

BLAST of PI0028927 vs. NCBI nr
Match: KAA0058708.1 (protein LOW PSII ACCUMULATION 3 [Cucumis melo var. makuwa] >TYK10514.1 protein LOW PSII ACCUMULATION 3 [Cucumis melo var. makuwa])

HSP 1 Score: 761.9 bits (1966), Expect = 2.6e-216
Identity = 381/388 (98.20%), Postives = 385/388 (99.23%), Query Frame = 0


Query: 1   MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRD 60
           M IMAFLSSPP+IPSLSRPFHSNFLFSPISSSLRRST SSLFGAQTLAASGFCFRIHCRD
Sbjct: 1   MPIMAFLSSPPYIPSLSRPFHSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRD 60

Query: 61  KERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS 120
           KERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS
Sbjct: 61  KERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS 120

Query: 121 YKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITV 180
           YKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRAS+LFKTA+DSIDGITV
Sbjct: 121 YKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITV 180

Query: 181 SSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV 240
           SSLDDVPAG VTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV
Sbjct: 181 SSLDDVPAGPVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV 240

Query: 241 ETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAP 300
           ETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTVAVAP
Sbjct: 241 ETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP 300

Query: 301 YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSS 360
           YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSS
Sbjct: 301 YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSS 360

Query: 361 LEFLRRGYKAATWWEEDVDSEVSSAWRS 389
           LEFLRRGYKAATWWEEDVDSEVSSAWRS
Sbjct: 361 LEFLRRGYKAATWWEEDVDSEVSSAWRS 388

[Close]

BLAST of PI0028927 vs. NCBI nr
Match: XP_008461181.1 (PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis melo])

HSP 1 Score: 758.1 bits (1956), Expect = 3.8e-215
Identity = 379/388 (97.68%), Postives = 384/388 (98.97%), Query Frame = 0


Query: 1   MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRD 60
           M IMAF+SSPP+IPSLSRPF SNFLFSPISSSLRRST SSLFGAQTLAASGFCFRIHCRD
Sbjct: 1   MPIMAFISSPPYIPSLSRPFQSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRD 60

Query: 61  KERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS 120
           KERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS
Sbjct: 61  KERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS 120

Query: 121 YKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITV 180
           YKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRAS+LFKTA+DSIDGITV
Sbjct: 121 YKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITV 180

Query: 181 SSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV 240
           SSLDDVPAG VTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV
Sbjct: 181 SSLDDVPAGPVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV 240

Query: 241 ETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAP 300
           ETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTVAVAP
Sbjct: 241 ETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP 300

Query: 301 YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSS 360
           YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSS
Sbjct: 301 YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSS 360

Query: 361 LEFLRRGYKAATWWEEDVDSEVSSAWRS 389
           LEFLRRGYKAATWWEEDVDSEVSSAWRS
Sbjct: 361 LEFLRRGYKAATWWEEDVDSEVSSAWRS 388

[Close]

BLAST of PI0028927 vs. NCBI nr
Match: XP_004135877.1 (protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis sativus] >KGN45217.1 hypothetical protein Csa_016225 [Cucumis sativus])

HSP 1 Score: 755.7 bits (1950), Expect = 1.9e-214
Identity = 379/388 (97.68%), Postives = 382/388 (98.45%), Query Frame = 0


Query: 1   MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCRD 60
           MAIMAFLSSPPHIPSLS PFH+NFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHC D
Sbjct: 1   MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSSLRRSTRSSLFGAQTLAASGFCFRIHCLD 60

Query: 61  KERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS 120
           KERAAPVTQ SDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS
Sbjct: 61  KERAAPVTQRSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS 120

Query: 121 YKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITV 180
           YKGSSD+FIDANIQLALAVARNLQEKRG RSCIVFPDKPEKRRASQLFKTALDSIDGITV
Sbjct: 121 YKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITV 180

Query: 181 SSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV 240
           SSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV
Sbjct: 181 SSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV 240

Query: 241 ETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAP 300
           ETFASSIP LLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTVAVAP
Sbjct: 241 ETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP 300

Query: 301 YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSS 360
           YIVNYSGALFRQY GPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSS
Sbjct: 301 YIVNYSGALFRQYAGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSS 360

Query: 361 LEFLRRGYKAATWWEEDVDSEVSSAWRS 389
           LEFLRRGYKAATWWEEDVDSEVSSAWRS
Sbjct: 361 LEFLRRGYKAATWWEEDVDSEVSSAWRS 388

[Close]

BLAST of PI0028927 vs. NCBI nr
Match: XP_038900014.1 (protein LOW PSII ACCUMULATION 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 749.6 bits (1934), Expect = 1.4e-212
Identity = 377/391 (96.42%), Postives = 383/391 (97.95%), Query Frame = 0


Query: 1   MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIH 60
           MAIMAF+SSPP IPSLSR FHSNFLFSPISSS   LRRSTRSSLFGAQTLA SGFCFRIH
Sbjct: 1   MAIMAFVSSPPQIPSLSRSFHSNFLFSPISSSFCALRRSTRSSLFGAQTLATSGFCFRIH 60

Query: 61  CRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSN 120
           CRDKER +PVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGK+RLEIDFPPLPSN
Sbjct: 61  CRDKERTSPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKIRLEIDFPPLPSN 120

Query: 121 ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDG 180
           ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDG
Sbjct: 121 ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDG 180

Query: 181 ITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIE 240
           ITVSSLDDVPAG VTSFFRSVRNTLDFDFED+N+GRWTSSDPPSLYIFINCSTRELGLIE
Sbjct: 181 ITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENSGRWTSSDPPSLYIFINCSTRELGLIE 240

Query: 241 KYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVA 300
           KYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTVA
Sbjct: 241 KYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA 300

Query: 301 VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQ 360
           VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQ
Sbjct: 301 VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQ 360

Query: 361 GSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 389
           GSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Sbjct: 361 GSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 391

[Close]

BLAST of PI0028927 vs. NCBI nr
Match: XP_022992481.1 (protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita maxima])

HSP 1 Score: 739.6 bits (1908), Expect = 1.4e-209
Identity = 368/391 (94.12%), Postives = 380/391 (97.19%), Query Frame = 0


Query: 1   MAIMAFLSSPPHIPSLSRPFHSNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIH 60
           MAIMAFLSSPPHIPSL RPFHSNFLFSPISSS   LRRSTRSSLFGAQTLA SGFCFRIH
Sbjct: 1   MAIMAFLSSPPHIPSLVRPFHSNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIH 60

Query: 61  CRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSN 120
           C DKERAAPVT+SSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSN
Sbjct: 61  CSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSN 120

Query: 121 ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDG 180
           ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKP+K RASQLFKTALDSIDG
Sbjct: 121 ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSIDG 180

Query: 181 ITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIE 240
           IT+SSLDD+PAG VTSFFRS+RNTLDFDFED+NAGRWTSS+PPSLYIFINCSTREL +IE
Sbjct: 181 ITISSLDDIPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIE 240

Query: 241 KYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVA 300
           KYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFY+RIREYSKTV 
Sbjct: 241 KYVETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVP 300

Query: 301 VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQ 360
           +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQ
Sbjct: 301 IAPYIVNYSGALFRQYPGPWQVMLKQTDNSYACVAESETRFTLGETKDELLRVLGLQEEQ 360

Query: 361 GSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 389
           GSSLEFLRRGYKAATWWEED DSEVSSAWRS
Sbjct: 361 GSSLEFLRRGYKAATWWEEDNDSEVSSAWRS 391

[Close]

BLAST of PI0028927 vs. TAIR 10
Match: AT1G73060.1 (Low PSII Accumulation 3 )

HSP 1 Score: 534.3 bits (1375), Expect = 8.4e-152
Identity = 252/321 (78.50%), Postives = 290/321 (90.34%), Query Frame = 0


Query: 68  TQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDE 127
           + +SDP+ GVP+YKPK+YEVL +DAANSLA+AL+D K RLEIDFPPLPS+ISSYKGSSD+
Sbjct: 38  SSNSDPRRGVPLYKPKSYEVLATDAANSLAFALQDSKSRLEIDFPPLPSSISSYKGSSDD 97

Query: 128 FIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVP 187
           FIDANIQLA+ V R LQEK  TR+CIVFPDKPEKRRASQ FK A DS+DGI++ SLDD+P
Sbjct: 98  FIDANIQLAVTVVRKLQEKIETRACIVFPDKPEKRRASQRFKAAFDSVDGISIGSLDDIP 157

Query: 188 AGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSI 247
             +VT+FFRS+R+TLDFDFED+N G W   +PP+LYIFINCSTREL  IEK+VETFASS 
Sbjct: 158 GTSVTNFFRSIRSTLDFDFEDENEGTWEPKEPPTLYIFINCSTRELSFIEKFVETFASST 217

Query: 248 PTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKTVAVAPYIVNYSG 307
           P LLFNLEL+TLRADLGLLGFPPKDLHYRFLSQFIPVFY+R REYSKTVAVAP+++NY+G
Sbjct: 218 PALLFNLELDTLRADLGLLGFPPKDLHYRFLSQFIPVFYIRTREYSKTVAVAPFVLNYNG 277

Query: 308 ALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG 367
           ALFRQYPGPWQVMLKQ+D S+ACVAES TRFTLGETK+ELL+VLGLQEE+GSSLEFLRRG
Sbjct: 278 ALFRQYPGPWQVMLKQTDGSFACVAESPTRFTLGETKEELLQVLGLQEEKGSSLEFLRRG 337

Query: 368 YKAATWWEEDVDSEVSSAWRS 389
           YK+ATWWEEDV+ E SS WR+
Sbjct: 338 YKSATWWEEDVELEASSNWRN 358

[Close]

BLAST of PI0028927 vs. TAIR 10
Match: AT5G48790.1 (Domain of unknown function (DUF1995) )

HSP 1 Score: 68.6 bits (166), Expect = 1.3e-11
Identity = 75/281 (26.69%), Postives = 126/281 (44.84%), Query Frame = 0


Query: 82  PKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSD---EFIDANIQLALA 141
           P+ Y  L++ A  ++  AL+D K  +EI+FP   S ++S  G  +   E  ++   +   
Sbjct: 68  PRDYVELINQAKEAVEMALKDEKQLMEIEFP--TSGLASVPGDGEGATEMTESINMIREF 127

Query: 142 VARNLQEKRGTRSCIVFPDKPEKRRASQ-LFKTALDSIDGITVSSLDDVPAGAVTSFFRS 201
             R L  ++   + I FP+  E + A + +F      +D +T  SL +        FF  
Sbjct: 128 CDRLLAPEKARSTRIFFPEANEVKFAQKTVFGGTYFKLDYLTKPSLFE-----DFGFFER 187

Query: 202 VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEK-YVETFASSIPTL-LFNLE 261
           V+           A R    D   L  +   +  E+ ++E+ Y E   ++   L +FN E
Sbjct: 188 VK----------MADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVVNTDRKLIIFNGE 247

Query: 262 LETLRADLGLLGFPPKDLHYRFLSQFIPVFYVRIREYSKT----VAVAPYIVNY----SG 321
           L+ +R+     G+ PK             FY ++   +KT    +    YI N+     G
Sbjct: 248 LDRIRS-----GYYPK------------FFYPKLAALTKTLLPKMETVYYIHNFKGQKGG 307

Query: 322 ALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELL 349
            LFR YPGPWQV L+++ N Y CV + E+  +L E   ++L
Sbjct: 308 VLFRCYPGPWQV-LRRTRNKYICVHQQESMPSLKEVALDIL 313

The following BLAST results are available for this feature:

BLAST of PI0028927 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H0W0	1.2e-150	78.50	Protein LPA3 OS=Arabidopsis thaliana OX=3702 GN=LPA3 PE=1 SV=1	[more]

BLAST of PI0028927 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UU42	1.3e-216	98.20	Protein LOW PSII ACCUMULATION 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CFB8	1.8e-215	97.68	protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KA03	9.2e-215	97.68	DUF1995 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G431980 PE=...	[more]
A0A6J1JTN7	6.8e-210	94.12	protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1GQW6	1.2e-209	94.12	protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of PI0028927 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0058708.1	2.6e-216	98.20	protein LOW PSII ACCUMULATION 3 [Cucumis melo var. makuwa] >TYK10514.1 protein L...	[more]
XP_008461181.1	3.8e-215	97.68	PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis melo]	[more]
XP_004135877.1	1.9e-214	97.68	protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis sativus] >KGN45217.1 hyp...	[more]
XP_038900014.1	1.4e-212	96.42	protein LOW PSII ACCUMULATION 3, chloroplastic [Benincasa hispida]	[more]
XP_022992481.1	1.4e-209	94.12	protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita maxima]	[more]

BLAST of PI0028927 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73060.1	8.4e-152	78.50	Low PSII Accumulation 3	[more]
AT5G48790.1	1.3e-11	26.69	Domain of unknown function (DUF1995)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018962	Domain of unknown function DUF1995	PFAM	PF09353	DUF1995	coord: 82..344 e-value: 1.9E-50 score: 171.7
None	No IPR available	PANTHER	PTHR34051:SF2	PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC	coord: 40..388
IPR044687	Protein LOW PSII ACCUMULATION 3	PANTHER	PTHR34051	PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC	coord: 40..388

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028927.1	PI0028927.1	mRNA