PI0028901 (gene) Melon (PI 482460) v1

Overview


Name	PI0028901
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr04: 17741068 .. 17741310 (+)
RNA-Seq Expression	PI0028901
Synteny	PI0028901

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAAAAAGCTCATACAACCAGATTAAGGCGATGCTGGATACTATGGCCAACAGTAATGAAGAATGGGATGAAGATGATTTCGACAATCGTCGAGGAAGAAGAGGAAAAAGCGAGGAAGGGTTGGATAAGAACGTCGTGGTGGCATTGCAAGGACAAATGACTGCGATGAATAACCTGCTGAAATCAATGACGATTTCGCAAGTTAACGATGCAGACAACTCCATTCAAGTAGTCAATTAA

mRNA sequence

ATGTTAAAAAGCTCATACAACCAGATTAAGGCGATGCTGGATACTATGGCCAACAGTAATGAAGAATGGGATGAAGATGATTTCGACAATCGTCGAGGAAGAAGAGGAAAAAGCGAGGAAGGGTTGGATAAGAACGTCGTGGTGGCATTGCAAGGACAAATGACTGCGATGAATAACCTGCTGAAATCAATGACGATTTCGCAAGTTAACGATGCAGACAACTCCATTCAAGTAGTCAATTAA

Coding sequence (CDS)

ATGTTAAAAAGCTCATACAACCAGATTAAGGCGATGCTGGATACTATGGCCAACAGTAATGAAGAATGGGATGAAGATGATTTCGACAATCGTCGAGGAAGAAGAGGAAAAAGCGAGGAAGGGTTGGATAAGAACGTCGTGGTGGCATTGCAAGGACAAATGACTGCGATGAATAACCTGCTGAAATCAATGACGATTTCGCAAGTTAACGATGCAGACAACTCCATTCAAGTAGTCAATTAA

Protein sequence

MLKSSYNQIKAMLDTMANSNEEWDEDDFDNRRGRRGKSEEGLDKNVVVALQGQMTAMNNLLKSMTISQVNDADNSIQVVN

Homology

[Close]

BLAST of PI0028901 vs. ExPASy TrEMBL
Match: A0A5A7SYS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00380 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.8e-17
Identity = 54/79 (68.35%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 1   MLKSSYNQIKAMLDTMANSNEEWDEDDFDNRRGRRGKSEEGLDKNVVVALQGQMTAMNNL 60
           MLKSS NQIKA LD+M N+NEE D+DDF + R  RGK+EEGLD N VVALQGQMT MNNL
Sbjct: 32  MLKSSCNQIKATLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMTVMNNL 91

Query: 61  LKSMTISQVNDADNSIQVV 80
           L+S+ +SQVN   +S QVV
Sbjct: 92  LQSIVLSQVNVRSSSFQVV 110

[Close]

BLAST of PI0028901 vs. ExPASy TrEMBL
Match: A0A5D3E1V8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G001000 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.7e-17
Identity = 54/79 (68.35%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 1  MLKSSYNQIKAMLDTMANSNEEWDEDDFDNRRGRRGKSEEGLDKNVVVALQGQMTAMNNL 60
          MLKSS NQIKA LD+M N+NEE D+DDF + R  RGK+EEGLD N VVALQGQM AMNNL
Sbjct: 1  MLKSSCNQIKASLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMAAMNNL 60

Query: 61 LKSMTISQVNDADNSIQVV 80
          L+S+ +SQVN   +S QVV
Sbjct: 61 LQSIVLSQVNVRSSSFQVV 79

[Close]

BLAST of PI0028901 vs. ExPASy TrEMBL
Match: A0A0A0K6F9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G307410 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.4e-16
Identity = 51/79 (64.56%), Postives = 66/79 (83.54%), Query Frame = 0


Query: 1   MLKSSYNQIKAMLDTMANSNEEWDEDDFDNRRGRRGKSEEGLDKNVVVALQGQMTAMNNL 60
           ML+SSYNQIKA LD+M+N+++EWD+  F +R   RG+++EGLDK+VVV LQGQM AMNNL
Sbjct: 59  MLRSSYNQIKATLDSMSNNSQEWDDIGFGSR--HRGRTKEGLDKSVVVVLQGQMIAMNNL 118

Query: 61  LKSMTISQVNDADNSIQVV 80
           L+SMT+SQVN A+N I  V
Sbjct: 119 LQSMTLSQVNAANNYIHAV 135

[Close]

BLAST of PI0028901 vs. ExPASy TrEMBL
Match: A0A5D3CSC7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1610G00360 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.3e-16
Identity = 49/76 (64.47%), Postives = 59/76 (77.63%), Query Frame = 0


Query: 4   SSYNQIKAMLDTMANSNEEWDEDDFDNRRGRRGKSEEGLDKNVVVALQGQMTAMNNLLKS 63
           SSYNQI   LD++A +NEEWD+D FD+ RG RGK+EEGLD+NV+V  QGQMTAMNNLL+ 
Sbjct: 25  SSYNQINETLDSIAINNEEWDDDGFDSHRGGRGKNEEGLDRNVMVVPQGQMTAMNNLLQL 84

Query: 64  MTISQVNDADNSIQVV 80
           M   QVN A +S Q V
Sbjct: 85  MVFLQVNAASSSFQSV 100

[Close]

BLAST of PI0028901 vs. ExPASy TrEMBL
Match: A0A5D3DIM8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold605G00460 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.6e-12
Identity = 45/82 (54.88%), Postives = 55/82 (67.07%), Query Frame = 0


Query: 1   MLKSSYNQIKAMLDTMANSNEEWDEDDFDNR-------RGRRGKSEEGLDKNVVVALQGQ 60
           MLKSSY QIK     MA +NEEWD+DDFD+R       +   G +E+G DKNVVVA QG 
Sbjct: 167 MLKSSYTQIKTTSGFMATNNEEWDDDDFDSRQEGIGKDKNHDGSNEKGFDKNVVVASQGP 226

Query: 61  MTAMNNLLKSMTISQVNDADNS 76
           M  MNN+L+SM + QVN A +S
Sbjct: 227 MIVMNNILQSMALLQVNAASSS 248

[Close]

BLAST of PI0028901 vs. NCBI nr
Match: KAA0035763.1 (hypothetical protein E6C27_scaffold403G00380 [Cucumis melo var. makuwa])

HSP 1 Score: 97.4 bits (241), Expect = 5.8e-17
Identity = 54/79 (68.35%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 1   MLKSSYNQIKAMLDTMANSNEEWDEDDFDNRRGRRGKSEEGLDKNVVVALQGQMTAMNNL 60
           MLKSS NQIKA LD+M N+NEE D+DDF + R  RGK+EEGLD N VVALQGQMT MNNL
Sbjct: 32  MLKSSCNQIKATLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMTVMNNL 91

Query: 61  LKSMTISQVNDADNSIQVV 80
           L+S+ +SQVN   +S QVV
Sbjct: 92  LQSIVLSQVNVRSSSFQVV 110

[Close]

BLAST of PI0028901 vs. NCBI nr
Match: TYK29856.1 (hypothetical protein E5676_scaffold208G001000 [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 7.5e-17
Identity = 54/79 (68.35%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 1  MLKSSYNQIKAMLDTMANSNEEWDEDDFDNRRGRRGKSEEGLDKNVVVALQGQMTAMNNL 60
          MLKSS NQIKA LD+M N+NEE D+DDF + R  RGK+EEGLD N VVALQGQM AMNNL
Sbjct: 1  MLKSSCNQIKASLDSMTNNNEECDDDDFCSHRRGRGKNEEGLDGNEVVALQGQMAAMNNL 60

Query: 61 LKSMTISQVNDADNSIQVV 80
          L+S+ +SQVN   +S QVV
Sbjct: 61 LQSIVLSQVNVRSSSFQVV 79

[Close]

BLAST of PI0028901 vs. NCBI nr
Match: KGN44484.1 (hypothetical protein Csa_015918 [Cucumis sativus])

HSP 1 Score: 95.1 bits (235), Expect = 2.9e-16
Identity = 51/79 (64.56%), Postives = 66/79 (83.54%), Query Frame = 0


Query: 1   MLKSSYNQIKAMLDTMANSNEEWDEDDFDNRRGRRGKSEEGLDKNVVVALQGQMTAMNNL 60
           ML+SSYNQIKA LD+M+N+++EWD+  F +R   RG+++EGLDK+VVV LQGQM AMNNL
Sbjct: 59  MLRSSYNQIKATLDSMSNNSQEWDDIGFGSR--HRGRTKEGLDKSVVVVLQGQMIAMNNL 118

Query: 61  LKSMTISQVNDADNSIQVV 80
           L+SMT+SQVN A+N I  V
Sbjct: 119 LQSMTLSQVNAANNYIHAV 135

[Close]

BLAST of PI0028901 vs. NCBI nr
Match: KAA0038192.1 (hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa] >TYK14793.1 hypothetical protein E5676_scaffold1610G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 93.2 bits (230), Expect = 1.1e-15
Identity = 49/76 (64.47%), Postives = 59/76 (77.63%), Query Frame = 0


Query: 4   SSYNQIKAMLDTMANSNEEWDEDDFDNRRGRRGKSEEGLDKNVVVALQGQMTAMNNLLKS 63
           SSYNQI   LD++A +NEEWD+D FD+ RG RGK+EEGLD+NV+V  QGQMTAMNNLL+ 
Sbjct: 25  SSYNQINETLDSIAINNEEWDDDGFDSHRGGRGKNEEGLDRNVMVVPQGQMTAMNNLLQL 84

Query: 64  MTISQVNDADNSIQVV 80
           M   QVN A +S Q V
Sbjct: 85  MVFLQVNAASSSFQSV 100

[Close]

BLAST of PI0028901 vs. NCBI nr
Match: KAA0025357.1 (hypothetical protein E6C27_scaffold1204G00410 [Cucumis melo var. makuwa] >TYK23443.1 hypothetical protein E5676_scaffold605G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 9.6e-12
Identity = 45/82 (54.88%), Postives = 55/82 (67.07%), Query Frame = 0


Query: 1   MLKSSYNQIKAMLDTMANSNEEWDEDDFDNR-------RGRRGKSEEGLDKNVVVALQGQ 60
           MLKSSY QIK     MA +NEEWD+DDFD+R       +   G +E+G DKNVVVA QG 
Sbjct: 167 MLKSSYTQIKTTSGFMATNNEEWDDDDFDSRQEGIGKDKNHDGSNEKGFDKNVVVASQGP 226

Query: 61  MTAMNNLLKSMTISQVNDADNS 76
           M  MNN+L+SM + QVN A +S
Sbjct: 227 MIVMNNILQSMALLQVNAASSS 248

The following BLAST results are available for this feature:

BLAST of PI0028901 vs.


Match Name	E-value	Identity	Description

BLAST of PI0028901 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SYS5	2.8e-17	68.35	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3E1V8	3.7e-17	68.35	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K6F9	1.4e-16	64.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G307410 PE=4 SV=1	[more]
A0A5D3CSC7	5.3e-16	64.47	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DIM8	4.6e-12	54.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0028901 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035763.1	5.8e-17	68.35	hypothetical protein E6C27_scaffold403G00380 [Cucumis melo var. makuwa]	[more]
TYK29856.1	7.5e-17	68.35	hypothetical protein E5676_scaffold208G001000 [Cucumis melo var. makuwa]	[more]
KGN44484.1	2.9e-16	64.56	hypothetical protein Csa_015918 [Cucumis sativus]	[more]
KAA0038192.1	1.1e-15	64.47	hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa] >TYK1479...	[more]
KAA0025357.1	9.6e-12	54.88	hypothetical protein E6C27_scaffold1204G00410 [Cucumis melo var. makuwa] >TYK234...	[more]

BLAST of PI0028901 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..41

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028901.1	PI0028901.1	mRNA