PI0028888 (gene) Melon (PI 482460) v1

Overview


Name	PI0028888
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	CASP-like protein
Location	chr06: 26322253 .. 26324133 (+)
RNA-Seq Expression	PI0028888
Synteny	PI0028888

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCATTCAACATAAATCCCAAACCAAACACAAACCCATCATTCCAATTCAGAAAAAAAAAAAAAGAAGAAAACCCCACTAATCCACTAATCCACTAATCTTCACTCCATAAAAGGGCAAAGAAAAGTTCTCAACTTTCATTTCATACCTTCTTATTCATCTACATCCCCTCCTTCACCAAACCCCATCAAAAAATTAGCTTCAAAAATGGCAGAAACCAACAATCCTTCACTCTTCAAATTTCTTGATTTCTCTTTAAGATTATGCTCTGTTCCTTTCAGCATCGCTGCTCTGTGGCTCACTGTCACCAACCGACAAGACAATCCAGATTATGGCAACTTAGAGTTTCATAATCTCAGTGGTCTCAAGTAATTAATTATGAAATTTCATCAAATTTTCTCTTAATCTTCTTAATGGGGTTGTTTGTAATTAGTAATTTCTTCTCTGTTTCAGGTACTTGGTTTGCATATCTGCCATCGCCGCCGTCTATGCTTTTCTCGCCGCCGCCGTTTCTTGCTTCCGGTGGTTCATTGTTAGGGCTTGGGTATTCTTCGTTTCCGATCAGGTTTGTGAATTTCCGTTTGGATTGAATTGTTATCTATCTCTTCGAATTTACTATTTTTATGTCGAAATTTTCTATTTTAGAAGATTGGGTTTCTAATGGTTAATTTAATTGGGATTTTTCATATCATATTGAAAGAATTAGCCAATGTAAGATTCTCACTATAATTTAATGAAATTTGTTTCTATTTTTCTTTTGTAAAAAAGAAATTGGGAAAGGATAAACACCGGTGATAGCTGTTATTATACTCTCGACTTCTCGAATTTTTTATGGTAAAAATTGAATCCTAAATTTTATACAAATGTTATTACTATTGTATAAGTTTTGAAAGTTCGATTTATGCAATTATTGTAGTTTTGAAGGTCTAATTTTAATATTTGTTAAAGTTGTAGAGGTCCAAGTCTTACCATTTAAAGATGGTGAGAGTTTTGCAATTTACCCTTATTTTTTTCTTTTATTACTATTGTATCAGTTTCGAAGATAGAGGTTTCTCTTAGTAACCATGTATGATTATTATTATTTTAAATTTTTTTAGAGGTAAAGAATACAAACAGTAAACAGACAACCCAAACAATCAATTTCGAGGCACCTCATATTTTTCTATCAGAAAAAACATATTTCCATATTAGAGAGCATCAAAGGAGGAAGTCAAAGGTGCAATAGCATGAGTGACATTATTTTCCTTTCTAGAAATGTGACAAAAAGACATAATATTAACAAAAGTTGTCTCAAATTCATTAGTACTTCTAAGGTAGGATTCCTAGTAGCTAGCCATTTATAGAATTTATTTCCTATTAGTCTACGTTATTAATTCAATTCAAATTTAAATCAAAACTAATACTTGAGTGCATTTATACATCTACGTCTATGTTTATGTTATAGACTTAGGAATTGAGTTTTGTTTTAATTTGATTTTTTTTGTTGTGATTTAGATTGTGGCTTATTTGATGGTTGCATCGGGCGCGGCGGTGGGAGAGATATTATACATAGCATACAATGGAGATAGAGAAGTTTCATGGAGTGAAGCTTGTAGTTCATATGGCAAATTTTGCAACAACATGAAAATGGCTCTCATTTTTCAAGCTTTAGGATTTGCTTGCTTCTTTCTCTTGGCTATCATCTCTGCTTTTAGGGCTTTTAGTGTCTTCCCCCCTCCCCTAATCTCTTCCCAATGAACTAATTAGATATTAATTAAACTATTCGTAATAAACATTGGTGTAATCGTGATGAGATTTTATTGATATAGCTCGCTCTTAATAAGTCATATAATCGCAAATGTAATTTGATTACTTTTGATTACACAGTAAATGTGACAAATTC

mRNA sequence

TTCATTCAACATAAATCCCAAACCAAACACAAACCCATCATTCCAATTCAGAAAAAAAAAAAAAGAAGAAAACCCCACTAATCCACTAATCCACTAATCTTCACTCCATAAAAGGGCAAAGAAAAGTTCTCAACTTTCATTTCATACCTTCTTATTCATCTACATCCCCTCCTTCACCAAACCCCATCAAAAAATTAGCTTCAAAAATGGCAGAAACCAACAATCCTTCACTCTTCAAATTTCTTGATTTCTCTTTAAGATTATGCTCTGTTCCTTTCAGCATCGCTGCTCTGTGGCTCACTGTCACCAACCGACAAGACAATCCAGATTATGGCAACTTAGAGTTTCATAATCTCAGTGGTCTCAAGTACTTGGTTTGCATATCTGCCATCGCCGCCGTCTATGCTTTTCTCGCCGCCGCCGTTTCTTGCTTCCGGTGGTTCATTGTTAGGGCTTGGGTATTCTTCGTTTCCGATCAGATTGTGGCTTATTTGATGGTTGCATCGGGCGCGGCGGTGGGAGAGATATTATACATAGCATACAATGGAGATAGAGAAGTTTCATGGAGTGAAGCTTGTAGTTCATATGGCAAATTTTGCAACAACATGAAAATGGCTCTCATTTTTCAAGCTTTAGGATTTGCTTGCTTCTTTCTCTTGGCTATCATCTCTGCTTTTAGGGCTTTTAGTGTCTTCCCCCCTCCCCTAATCTCTTCCCAATGAACTAATTAGATATTAATTAAACTATTCGTAATAAACATTGGTGTAATCGTGATGAGATTTTATTGATATAGCTCGCTCTTAATAAGTCATATAATCGCAAATGTAATTTGATTACTTTTGATTACACAGTAAATGTGACAAATTC

Coding sequence (CDS)

ATGGCAGAAACCAACAATCCTTCACTCTTCAAATTTCTTGATTTCTCTTTAAGATTATGCTCTGTTCCTTTCAGCATCGCTGCTCTGTGGCTCACTGTCACCAACCGACAAGACAATCCAGATTATGGCAACTTAGAGTTTCATAATCTCAGTGGTCTCAAGTACTTGGTTTGCATATCTGCCATCGCCGCCGTCTATGCTTTTCTCGCCGCCGCCGTTTCTTGCTTCCGGTGGTTCATTGTTAGGGCTTGGGTATTCTTCGTTTCCGATCAGATTGTGGCTTATTTGATGGTTGCATCGGGCGCGGCGGTGGGAGAGATATTATACATAGCATACAATGGAGATAGAGAAGTTTCATGGAGTGAAGCTTGTAGTTCATATGGCAAATTTTGCAACAACATGAAAATGGCTCTCATTTTTCAAGCTTTAGGATTTGCTTGCTTCTTTCTCTTGGCTATCATCTCTGCTTTTAGGGCTTTTAGTGTCTTCCCCCCTCCCCTAATCTCTTCCCAATGA

Protein sequence

MAETNNPSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYGKFCNNMKMALIFQALGFACFFLLAIISAFRAFSVFPPPLISSQ

Homology

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BLAST of PI0028888 vs. ExPASy Swiss-Prot
Match: B9HTL5 (CASP-like protein 2D1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_833824 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.9e-53
Identity = 103/163 (63.19%), Postives = 129/163 (79.14%), Query Frame = 0


Query: 9   LFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAF 68
           + K LDFSLRL  +P S+A +WLTVTN+QDN  YG L++ +L+GLKY+V IS I A YAF
Sbjct: 1   MLKLLDFSLRLSVIPLSVATIWLTVTNKQDNSIYGYLKYSDLTGLKYMVFISGICASYAF 60

Query: 69  LAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYG 128
           +AA  +  R  + + W+FFVSDQIVAYLMV SG AV EILY+AYNGDREVSWSEAC+SYG
Sbjct: 61  IAAVSTWIRCIVTKTWLFFVSDQIVAYLMVTSGTAVLEILYLAYNGDREVSWSEACTSYG 120

Query: 129 KFCNNMKMALIFQALGFACFFLLAIISAFRAFSVFPPPLISSQ 172
           KFC  MK+A+I  AL  +CF +LA+ISA+RAFS+F PPL+ S+
Sbjct: 121 KFCYRMKLAVILHALALSCFIILAVISAYRAFSIFEPPLVPSK 163

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BLAST of PI0028888 vs. ExPASy Swiss-Prot
Match: C6T2J5 (CASP-like protein 2D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.5e-52
Identity = 98/160 (61.25%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 12  FLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAFLAA 71
           F D SLRLC++P S+A +W+TVTN++DN  YG L+++NLS LKY+V +SA+ A YA LAA
Sbjct: 21  FFDSSLRLCAIPLSVATMWITVTNKEDNSSYGMLKYNNLSALKYMVLVSALCACYALLAA 80

Query: 72  AVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYGKFC 131
           A S  R F+ +AW+FFVSDQIVAYL + S AAV E+ Y+AYNG +E SWSEACSSYG FC
Sbjct: 81  ACSLVRCFVSKAWIFFVSDQIVAYLAITSVAAVMEMYYLAYNGAKEDSWSEACSSYGSFC 140

Query: 132 NNMKMALIFQALGFACFFLLAIISAFRAFSVFPPPLISSQ 172
           + +K+ALI   + F CFF++A+ISAFRAFSVF PP ++SQ
Sbjct: 141 SKVKLALILHTITFCCFFVIAVISAFRAFSVFDPPFVNSQ 180

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BLAST of PI0028888 vs. ExPASy Swiss-Prot
Match: A7P0P3 (CASP-like protein 2D1 OS=Vitis vinifera OX=29760 GN=VIT_19s0090g00570 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.7e-51
Identity = 100/161 (62.11%), Postives = 124/161 (77.02%), Query Frame = 0


Query: 11  KFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAFLA 70
           K +D SLRLC +P S+A +WLTVTN+QDN  YG LEF NL+GLKY+VCIS I+A YA +A
Sbjct: 19  KLIDCSLRLCVIPLSVATIWLTVTNQQDNSIYGKLEFSNLTGLKYMVCISGISAGYALVA 78

Query: 71  AAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYGKF 130
              S  R  + +AW+FFVSDQI+AYLMV SGAAV EILY+AY GDR VSWSEACSSYG+F
Sbjct: 79  VVASWVRCLVNKAWLFFVSDQIMAYLMVTSGAAVLEILYLAYKGDRGVSWSEACSSYGRF 138

Query: 131 CNNMKMALIFQALGFACFFLLAIISAFRAFSVFPPPLISSQ 172
           C+ + +AL   AL   CF +LA+ISA+R FS+F PP+ S +
Sbjct: 139 CSRVNLALALHALALCCFLVLAVISAYRVFSMFEPPVSSKE 179

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BLAST of PI0028888 vs. ExPASy Swiss-Prot
Match: B9SV84 (CASP-like protein 2D1 OS=Ricinus communis OX=3988 GN=RCOM_1302390 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.6e-49
Identity = 99/163 (60.74%), Postives = 123/163 (75.46%), Query Frame = 0


Query: 9   LFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAF 68
           L K LD SLR+  +P S A +WLTVTN QDN  YGNL++ N+ GLKY+VCISAI A YAF
Sbjct: 4   LLKLLDSSLRVSVIPLSAATIWLTVTNHQDNSSYGNLKYSNIMGLKYMVCISAICASYAF 63

Query: 69  LAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYG 128
           +AA     +  + + W+FFVSDQI+AYLMV S AA  EILYIAYNGD++V+WSEAC+SYG
Sbjct: 64  VAAVSIWIKCLVNKVWLFFVSDQIIAYLMVTSVAAAMEILYIAYNGDQKVTWSEACTSYG 123

Query: 129 KFCNNMKMALIFQALGFACFFLLAIISAFRAFSVFPPPLISSQ 172
           KFCN MK ALI  AL    F +LA+ISA+RAFS++ PP+ S +
Sbjct: 124 KFCNGMKTALILHALTLCFFIVLAVISAYRAFSMYQPPVSSKE 166

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BLAST of PI0028888 vs. ExPASy Swiss-Prot
Match: Q9FFT2 (CASP-like protein 2D1 OS=Arabidopsis thaliana OX=3702 GN=At5g54980 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.6e-37
Identity = 76/160 (47.50%), Postives = 107/160 (66.88%), Query Frame = 0


Query: 7   PSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVY 66
           P   K +D  LRL  VP S+A +WLTVTN + NPDYGNLE++++ GLKY+V +SAI+A+Y
Sbjct: 26  PMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAIY 85

Query: 67  AFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSS 126
           A L+   S     + +AW+FF+ DQ++AY+M  S A   EI+Y+   GD+ V+WSE CSS
Sbjct: 86  ALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSS 145

Query: 127 YGKFCNNMKMALIFQALGFACFFLLAIISAFRAFSVFPPP 167
           Y  +C+ + +AL         F  L++ISA+RAFS F PP
Sbjct: 146 YPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPP 185

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BLAST of PI0028888 vs. ExPASy TrEMBL
Match: A0A5D3BS29 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00020 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.9e-88
Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MAETNNPSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60
           MAETNNPSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS
Sbjct: 1   MAETNNPSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60

Query: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120
           AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW
Sbjct: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120

Query: 121 SEACSSYGKFCNNMKMALIFQALGFACFFLLAIISAFRAFSVFPPPLISS 171
           SEACSSYGKFCNNMKMALIFQALGF CFFLLAIISAFRAFSVFPPPLISS
Sbjct: 121 SEACSSYGKFCNNMKMALIFQALGFGCFFLLAIISAFRAFSVFPPPLISS 170

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BLAST of PI0028888 vs. ExPASy TrEMBL
Match: A0A1S3CJM6 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103501577 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.9e-88
Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MAETNNPSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60
           MAETNNPSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS
Sbjct: 1   MAETNNPSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60

Query: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120
           AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW
Sbjct: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120

Query: 121 SEACSSYGKFCNNMKMALIFQALGFACFFLLAIISAFRAFSVFPPPLISS 171
           SEACSSYGKFCNNMKMALIFQALGF CFFLLAIISAFRAFSVFPPPLISS
Sbjct: 121 SEACSSYGKFCNNMKMALIFQALGFGCFFLLAIISAFRAFSVFPPPLISS 170

[Close]

BLAST of PI0028888 vs. ExPASy TrEMBL
Match: A0A0A0L6A1 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G076530 PE=3 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.2e-87
Identity = 166/171 (97.08%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MAETNNPSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60
           M ETN+PSLFKFLDFSLRLCSVPF++AALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS
Sbjct: 1   MTETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60

Query: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120
           AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW
Sbjct: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120

Query: 121 SEACSSYGKFCNNMKMALIFQALGFACFFLLAIISAFRAFSVFPPPLISSQ 172
           SEACSSYGKFCNNMKMALIFQALGFACFF LAIISAFRAFSVFPPPLISSQ
Sbjct: 121 SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 171

[Close]

BLAST of PI0028888 vs. ExPASy TrEMBL
Match: A0A6J1J679 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482956 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.3e-61
Identity = 127/171 (74.27%), Postives = 143/171 (83.63%), Query Frame = 0


Query: 1   MAETNN--PSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60
           M ET+N  P + K LD SLRL SVP +IA++ LTVTNRQDNPDYG LEFHNLSGLKY+VC
Sbjct: 1   MEETHNSHPPILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVC 60

Query: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120

Query: 121 SWSEACSSYGKFCNNMKMALIFQALGFACFFLLAIISAFRAFSVFPPPLIS 170
           SWSEA S+YGKFC+ MKMAL+FQALGF CFF++A++SAFRAFS+F PPL S
Sbjct: 121 SWSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPS 171

[Close]

BLAST of PI0028888 vs. ExPASy TrEMBL
Match: A0A6J1FRA5 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111447478 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 3.0e-61
Identity = 127/171 (74.27%), Postives = 143/171 (83.63%), Query Frame = 0


Query: 1   MAETNN--PSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60
           M ET+N  P + K LD SLRL SVP +IA++ LTVTNRQDNPDYG LEFHNLSGLKY+VC
Sbjct: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVC 60

Query: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120

Query: 121 SWSEACSSYGKFCNNMKMALIFQALGFACFFLLAIISAFRAFSVFPPPLIS 170
           SWSEA S+YGKFC+ MKMAL+FQALGF CFF++A++SAFRAFS+F PPL S
Sbjct: 121 SWSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPS 171

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BLAST of PI0028888 vs. NCBI nr
Match: XP_008463406.1 (PREDICTED: CASP-like protein 2D1 [Cucumis melo] >KAA0033994.1 CASP-like protein 2D1 [Cucumis melo var. makuwa] >TYK02551.1 CASP-like protein 2D1 [Cucumis melo var. makuwa])

HSP 1 Score: 334.3 bits (856), Expect = 6.0e-88
Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MAETNNPSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60
           MAETNNPSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS
Sbjct: 1   MAETNNPSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60

Query: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120
           AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW
Sbjct: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120

Query: 121 SEACSSYGKFCNNMKMALIFQALGFACFFLLAIISAFRAFSVFPPPLISS 171
           SEACSSYGKFCNNMKMALIFQALGF CFFLLAIISAFRAFSVFPPPLISS
Sbjct: 121 SEACSSYGKFCNNMKMALIFQALGFGCFFLLAIISAFRAFSVFPPPLISS 170

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BLAST of PI0028888 vs. NCBI nr
Match: XP_004149352.1 (CASP-like protein 2D1 [Cucumis sativus] >KGN56117.1 hypothetical protein Csa_010913 [Cucumis sativus])

HSP 1 Score: 330.5 bits (846), Expect = 8.7e-87
Identity = 166/171 (97.08%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MAETNNPSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60
           M ETN+PSLFKFLDFSLRLCSVPF++AALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS
Sbjct: 1   MTETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60

Query: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120
           AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW
Sbjct: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120

Query: 121 SEACSSYGKFCNNMKMALIFQALGFACFFLLAIISAFRAFSVFPPPLISSQ 172
           SEACSSYGKFCNNMKMALIFQALGFACFF LAIISAFRAFSVFPPPLISSQ
Sbjct: 121 SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 171

[Close]

BLAST of PI0028888 vs. NCBI nr
Match: XP_038903731.1 (CASP-like protein 2D1 [Benincasa hispida])

HSP 1 Score: 310.5 bits (794), Expect = 9.3e-81
Identity = 156/171 (91.23%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 1   MAETNNPSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60
           MAE NN S  K +DFSLRLCSVP SIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS
Sbjct: 1   MAEPNNSSPIKLVDFSLRLCSVPLSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60

Query: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120
           AIAA YAFLAA VSCFRWF+V+AWVFFVSDQIVAYLMV SGAAVGEILY+AYNGDREVSW
Sbjct: 61  AIAATYAFLAAVVSCFRWFLVKAWVFFVSDQIVAYLMVTSGAAVGEILYLAYNGDREVSW 120

Query: 121 SEACSSYGKFCNNMKMALIFQALGFACFFLLAIISAFRAFSVFPPPLISSQ 172
           SEACSSYGKFCNNMKMALIFQALGFACFF+LAIISAFRAFSVF PPLISSQ
Sbjct: 121 SEACSSYGKFCNNMKMALIFQALGFACFFILAIISAFRAFSVFHPPLISSQ 171

[Close]

BLAST of PI0028888 vs. NCBI nr
Match: XP_022984776.1 (CASP-like protein 2D1 [Cucurbita maxima])

HSP 1 Score: 245.0 bits (624), Expect = 4.8e-61
Identity = 127/171 (74.27%), Postives = 143/171 (83.63%), Query Frame = 0


Query: 1   MAETNN--PSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60
           M ET+N  P + K LD SLRL SVP +IA++ LTVTNRQDNPDYG LEFHNLSGLKY+VC
Sbjct: 1   MEETHNSHPPILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVC 60

Query: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120

Query: 121 SWSEACSSYGKFCNNMKMALIFQALGFACFFLLAIISAFRAFSVFPPPLIS 170
           SWSEA S+YGKFC+ MKMAL+FQALGF CFF++A++SAFRAFS+F PPL S
Sbjct: 121 SWSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPS 171

[Close]

BLAST of PI0028888 vs. NCBI nr
Match: XP_022942434.1 (CASP-like protein 2D1 [Cucurbita moschata])

HSP 1 Score: 244.6 bits (623), Expect = 6.3e-61
Identity = 127/171 (74.27%), Postives = 143/171 (83.63%), Query Frame = 0


Query: 1   MAETNN--PSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60
           M ET+N  P + K LD SLRL SVP +IA++ LTVTNRQDNPDYG LEFHNLSGLKY+VC
Sbjct: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVC 60

Query: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120

Query: 121 SWSEACSSYGKFCNNMKMALIFQALGFACFFLLAIISAFRAFSVFPPPLIS 170
           SWSEA S+YGKFC+ MKMAL+FQALGF CFF++A++SAFRAFS+F PPL S
Sbjct: 121 SWSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPS 171

[Close]

BLAST of PI0028888 vs. TAIR 10
Match: AT5G54980.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 154.8 bits (390), Expect = 6.1e-38
Identity = 76/160 (47.50%), Postives = 107/160 (66.88%), Query Frame = 0


Query: 7   PSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVY 66
           P   K +D  LRL  VP S+A +WLTVTN + NPDYGNLE++++ GLKY+V +SAI+A+Y
Sbjct: 26  PMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAIY 85

Query: 67  AFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSS 126
           A L+   S     + +AW+FF+ DQ++AY+M  S A   EI+Y+   GD+ V+WSE CSS
Sbjct: 86  ALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSS 145

Query: 127 YGKFCNNMKMALIFQALGFACFFLLAIISAFRAFSVFPPP 167
           Y  +C+ + +AL         F  L++ISA+RAFS F PP
Sbjct: 146 YPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPP 185

[Close]

BLAST of PI0028888 vs. TAIR 10
Match: AT1G17200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 108.2 bits (269), Expect = 6.5e-24
Identity = 58/155 (37.42%), Postives = 97/155 (62.58%), Query Frame = 0


Query: 17  LRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAFLAAAVSCF 76
           LRL  V   +AAL + + + + N ++G++ + NL+  +YLV  + I A Y+ L+AA++  
Sbjct: 37  LRLAPVGLCVAALVVMLKDSETN-EFGSISYSNLTAFRYLVHANGICAGYSLLSAAIAAM 96

Query: 77  ---RWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYGKFCNN 136
                 + R W FF  DQ++ YL++A+GA   E+LY+AYNGD  ++WS+ACSSYG FC+ 
Sbjct: 97  PRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSSYGGFCHR 156

Query: 137 MKMALIFQALGFACFFLLAIISAFRAFSVFPPPLI 169
              ++I        + +L++IS+++ F+ F PP I
Sbjct: 157 ATASVIITFFVVCFYIVLSLISSYKLFTRFDPPSI 190

[Close]

BLAST of PI0028888 vs. TAIR 10
Match: AT3G14380.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 91.3 bits (225), Expect = 8.2e-19
Identity = 52/154 (33.77%), Postives = 91/154 (59.09%), Query Frame = 0


Query: 17  LRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAFLAA----A 76
           LR+ S+  SI  L + + N   N ++G++ + N+    YLV  + + A Y+ L+A    A
Sbjct: 27  LRVASMALSITGLVIMIKNSISN-EFGSVSYSNIGAFMYLVSANGVCAAYSLLSALAILA 86

Query: 77  VSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYGKFCN 136
           + C     V+    F+ DQ+V Y+++A+GA   E +Y+AY G+  ++WS AC SYG FC+
Sbjct: 87  LPC-PISKVQVRTLFLLDQVVTYVVLAAGAVSAETVYLAYYGNIPITWSSACDSYGSFCH 146

Query: 137 NMKMALIFQALGFACFFLLAIISAFRAFSVFPPP 167
           N  ++++F  +    + LL++IS++R F+ F  P
Sbjct: 147 NALISVVFTFVVSLLYMLLSLISSYRLFTRFEAP 178

[Close]

BLAST of PI0028888 vs. TAIR 10
Match: AT1G17200.2 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 82.8 bits (203), Expect = 2.9e-16
Identity = 46/122 (37.70%), Postives = 76/122 (62.30%), Query Frame = 0


Query: 50  LSGLKYLVCISAIAAVYAFLAAAVSCF---RWFIVRAWVFFVSDQIVAYLMVASGAAVGE 109
           +S +++L  IS     Y+ L+AA++        + R W FF  DQ++ YL++A+GA   E
Sbjct: 1   MSSVQFLTPISQPLG-YSLLSAAIAAMPRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAE 60

Query: 110 ILYIAYNGDREVSWSEACSSYGKFCNNMKMALIFQALGFACFFLLAIISAFRAFSVFPPP 169
           +LY+AYNGD  ++WS+ACSSYG FC+    ++I        + +L++IS+++ F+ F PP
Sbjct: 61  VLYLAYNGDSAITWSDACSSYGGFCHRATASVIITFFVVCFYIVLSLISSYKLFTRFDPP 120

[Close]

BLAST of PI0028888 vs. TAIR 10
Match: AT4G16442.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-11
Identity = 53/170 (31.18%), Postives = 85/170 (50.00%), Query Frame = 0


Query: 11  KFLDFSLRL------CSVP-FSIAALWLTVTNRQDNPDY---GNLEFHNLSGLKYLVCIS 70
           K +D  +RL      CS+  F++ AL L VT+ +    +      ++ ++  + +LV  +
Sbjct: 2   KLIDRRMRLTELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVAN 61

Query: 71  AIAAVYAFLAA---AVSCFRWFIV----RAWVFFVSDQIVAYLMVASGAAVGEILYIAYN 130
            IAAVY+ L +    V   +  ++     AW FF  DQ +AYL VA+ AA  E   IA  
Sbjct: 62  GIAAVYSLLQSVRCVVGTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIARE 121

Query: 131 GDREVSWSEACSSYGKFCNNMKMALIFQALGFACFFLLAIISAFRAFSVF 164
           G+ ++ W   C+ YGKFCN M + +    L       ++ ISAF  F ++
Sbjct: 122 GEEDLQWMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLY 171

The following BLAST results are available for this feature:

BLAST of PI0028888 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9HTL5	2.9e-53	63.19	CASP-like protein 2D1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_833824 PE=3 S...	[more]
C6T2J5	5.5e-52	61.25	CASP-like protein 2D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
A7P0P3	2.7e-51	62.11	CASP-like protein 2D1 OS=Vitis vinifera OX=29760 GN=VIT_19s0090g00570 PE=2 SV=1	[more]
B9SV84	2.6e-49	60.74	CASP-like protein 2D1 OS=Ricinus communis OX=3988 GN=RCOM_1302390 PE=2 SV=1	[more]
Q9FFT2	8.6e-37	47.50	CASP-like protein 2D1 OS=Arabidopsis thaliana OX=3702 GN=At5g54980 PE=2 SV=1	[more]

BLAST of PI0028888 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BS29	2.9e-88	99.41	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00...	[more]
A0A1S3CJM6	2.9e-88	99.41	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103501577 PE=3 SV=1	[more]
A0A0A0L6A1	4.2e-87	97.08	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G076530 PE=3 SV=1	[more]
A0A6J1J679	2.3e-61	74.27	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482956 PE=3 SV=1	[more]
A0A6J1FRA5	3.0e-61	74.27	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111447478 PE=3 SV=1	[more]

BLAST of PI0028888 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463406.1	6.0e-88	99.41	PREDICTED: CASP-like protein 2D1 [Cucumis melo] >KAA0033994.1 CASP-like protein ...	[more]
XP_004149352.1	8.7e-87	97.08	CASP-like protein 2D1 [Cucumis sativus] >KGN56117.1 hypothetical protein Csa_010...	[more]
XP_038903731.1	9.3e-81	91.23	CASP-like protein 2D1 [Benincasa hispida]	[more]
XP_022984776.1	4.8e-61	74.27	CASP-like protein 2D1 [Cucurbita maxima]	[more]
XP_022942434.1	6.3e-61	74.27	CASP-like protein 2D1 [Cucurbita moschata]	[more]

BLAST of PI0028888 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54980.1	6.1e-38	47.50	Uncharacterised protein family (UPF0497)	[more]
AT1G17200.1	6.5e-24	37.42	Uncharacterised protein family (UPF0497)	[more]
AT3G14380.1	8.2e-19	33.77	Uncharacterised protein family (UPF0497)	[more]
AT1G17200.2	2.9e-16	37.70	Uncharacterised protein family (UPF0497)	[more]
AT4G16442.1	1.7e-11	31.18	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 11..147 e-value: 1.4E-32 score: 112.6
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 16..158 e-value: 7.1E-23 score: 79.1
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 5..170
None	No IPR available	PANTHER	PTHR11615:SF143	CASP-LIKE PROTEIN 2D1	coord: 5..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028888.1	PI0028888.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding