PI0028840 (gene) Melon (PI 482460) v1

Overview


Name	PI0028840
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	VQ domain-containing protein
Location	chr04: 32205020 .. 32207040 (-)
RNA-Seq Expression	PI0028840
Synteny	PI0028840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCATCTGTGAATGACAAGTAAAAGATCTTCCCCTCCTTCCAAGATTTTTATTCCTTCTCAATAAAAGCTGATCTTTCGAAGCTGATCTCGATCGATCTCCATCTTATTTATTTGTTTTTGGAAATTTTAATTTACTTGGTTTGCTAATGGATTCCGGTAGCGGAAGTTTGCAATCTTCTAGTGGTGGTGATGAAGAATATGATTCTCATCATCAACAACCTCAACTAGTTTTTCCTCCATCCCCACTTTTCTTCAATCTTCCTTCTTCTTCTTCTTCTTCTTGTTCCTCTTCATCTCTTCTTGCTTGTTCTTCTTCTTCTTCAATTCCTCATCATCAACAATCACTTCCTAATTTTCATAATTACCAAAATAATCATCACCTCCTTCCTTCTTTCTATGATTTCCCTTCGTCTAATTACAATTTCAACCCTGATTCTTCTTCCAATTCCTTTGTTAATCTCGACGTCTTAAGATCTGCAGAACCCACCCATTTCAAAAACCCTCCCGACGGATCTACCCAAAACCAAATCCCAACGATTCGTTCAACCCCATCAACATCTTCCGGCGCTTTACATCCCAAAGTCACTACCAAGAAACGAACTAGAGCTTCACGTCGAGCCCCCACGACCGTTCTCACAACAGACACTACTAATTTCAGAGCAATGGTACAAGAGTTCACTGGAATCCCTTCCCCGCCCTTCACTTCCGGTGGGTCATCCTATTCCCGGCGATTTGATCTGTTTGGGTTGGTTCGAACAACGAGCAATAACTCCACGGCTACGCGTCTAGAAGATTCTGGATTGGGAGTGGGTTCTTACCCTTCTCGATCAAAGGACGACAATGTTGGTGTTGGTGGGGTTTTTTCGTTTCAATCGGTATCTTCAGGGCATGATTTTAATTCTAATTCCAAGCAAGTTAGAGAAAATTAGAGATGGACCACAATGTTCATGGCAGTAATAGGCTGGTACAAAATGATGAAACCTGGAGAAGCAACCGCGGCGGTAGTACAACTGCAGCAACAGCAACAGCAGCAACAGCAGCGACAGTGACAGCAAGTTCCAACAATAACAATAATAATAATAATGCAGCAAATTGTAAGTTTTAAATTTTATGGGGTTGTTGTTCACTTTGTTCTTTCATTGAATAATTTGGGGAATATTTGTTTCAACTACCAAGAGGGTAAAAGTACAGTAGTAGATTAAAGAAAAAAAAAAAAAAAGGGAAATGGGTAAATTTTTCTTTTAGGTAATCAAAATGGCAATGATGATGATACTGATGATTTTAATGATGATTGTGGAGATTGTAGTGGTGGTGGTAGTGGTGGTGGTAAGTTGATGATGGAAAATAAGAACCCTCAAGCAACAACCCCTCTTCCCCCGTAGACCCGTCATCATAAAACCCTTTTGGCAGTTTATATACCAAGGAATATTATTATTAGTTTTCAAGGTCAAATATCAAACTTTCGCAAGTATATTAATTTAAACCTAAACTTTCATAAATATATTAATTTAAATCTTTAAATTTCATTAAACATAATGGTTTAATTGATTAACGATTAGTTTGAGGTTTAAACGGATACAAACAACCAAAGTTCAAGACTTAACGTGGTAAAATCGTAGAGCTGAAAGTGTATATTGATATTTTTTCTATTTTATATATTTTCATATAATAGAATGTTGTTTAGAGCATAAAATGATGAAAATTTAGGGTTTATAACGGTGGGTGTGTTTGGATTTTAGTGGATTCAGGTTACAATATAATGGCGTAAGGGGAAGGTGGAAGAATTTTTGCAACGCCGTAGAAGAAGCTGTGTTTTGGCAATTGCCGCAGTCTATGGCGGTTCGAAAATTTCCGGTCAGAAATGGGGCCCAGTCTCTCTACTACCGGTGATTTTGAAGGAAAAAGAAAAATTATATATATATTATGATGCTATGTTTGATAGGCTATTCTCTATTGCTACCCTAATATATATATATATCATCATCATATACTCTCTACCTGTTGTTATGTTATTAGTC

mRNA sequence

ATTCCATCTGTGAATGACAAGTAAAAGATCTTCCCCTCCTTCCAAGATTTTTATTCCTTCTCAATAAAAGCTGATCTTTCGAAGCTGATCTCGATCGATCTCCATCTTATTTATTTGTTTTTGGAAATTTTAATTTACTTGGTTTGCTAATGGATTCCGGTAGCGGAAGTTTGCAATCTTCTAGTGGTGGTGATGAAGAATATGATTCTCATCATCAACAACCTCAACTAGTTTTTCCTCCATCCCCACTTTTCTTCAATCTTCCTTCTTCTTCTTCTTCTTCTTGTTCCTCTTCATCTCTTCTTGCTTGTTCTTCTTCTTCTTCAATTCCTCATCATCAACAATCACTTCCTAATTTTCATAATTACCAAAATAATCATCACCTCCTTCCTTCTTTCTATGATTTCCCTTCGTCTAATTACAATTTCAACCCTGATTCTTCTTCCAATTCCTTTGTTAATCTCGACGTCTTAAGATCTGCAGAACCCACCCATTTCAAAAACCCTCCCGACGGATCTACCCAAAACCAAATCCCAACGATTCGTTCAACCCCATCAACATCTTCCGGCGCTTTACATCCCAAAGTCACTACCAAGAAACGAACTAGAGCTTCACGTCGAGCCCCCACGACCGTTCTCACAACAGACACTACTAATTTCAGAGCAATGGTACAAGAGTTCACTGGAATCCCTTCCCCGCCCTTCACTTCCGGTGGGTCATCCTATTCCCGGCGATTTGATCTGTTTGGGTTGGTTCGAACAACGAGCAATAACTCCACGGCTACGCGTCTAGAAGATTCTGGATTGGGAGTGGGTTCTTACCCTTCTCGATCAAAGGACGACAATGTTGGTGTTGGTGGGGTTTTTTCGTTTCAATCGGTATCTTCAGGGCATGATTTTAATTCTAATTCCAAGCAAGTTAGAGAAAATTAGAGATGGACCACAATGTTCATGGCAGTAATAGGCTGGTACAAAATGATGAAACCTGGAGAAGCAACCGCGGCGGTAGTACAACTGCAGCAACAGCAACAGCAGCAACAGCAGCGACAGTGACAGCAAGTTCCAACAATAACAATAATAATAATAATGCAGCAAATTTGGATTCAGGTTACAATATAATGGCGTAAGGGGAAGGTGGAAGAATTTTTGCAACGCCGTAGAAGAAGCTGTGTTTTGGCAATTGCCGCAGTCTATGGCGGTTCGAAAATTTCCGGTCAGAAATGGGGCCCAGTCTCTCTACTACCGGTGATTTTGAAGGAAAAAGAAAAATTATATATATATTATGATGCTATGTTTGATAGGCTATTCTCTATTGCTACCCTAATATATATATATATCATCATCATATACTCTCTACCTGTTGTTATGTTATTAGTC

Coding sequence (CDS)

ATGGATTCCGGTAGCGGAAGTTTGCAATCTTCTAGTGGTGGTGATGAAGAATATGATTCTCATCATCAACAACCTCAACTAGTTTTTCCTCCATCCCCACTTTTCTTCAATCTTCCTTCTTCTTCTTCTTCTTCTTGTTCCTCTTCATCTCTTCTTGCTTGTTCTTCTTCTTCTTCAATTCCTCATCATCAACAATCACTTCCTAATTTTCATAATTACCAAAATAATCATCACCTCCTTCCTTCTTTCTATGATTTCCCTTCGTCTAATTACAATTTCAACCCTGATTCTTCTTCCAATTCCTTTGTTAATCTCGACGTCTTAAGATCTGCAGAACCCACCCATTTCAAAAACCCTCCCGACGGATCTACCCAAAACCAAATCCCAACGATTCGTTCAACCCCATCAACATCTTCCGGCGCTTTACATCCCAAAGTCACTACCAAGAAACGAACTAGAGCTTCACGTCGAGCCCCCACGACCGTTCTCACAACAGACACTACTAATTTCAGAGCAATGGTACAAGAGTTCACTGGAATCCCTTCCCCGCCCTTCACTTCCGGTGGGTCATCCTATTCCCGGCGATTTGATCTGTTTGGGTTGGTTCGAACAACGAGCAATAACTCCACGGCTACGCGTCTAGAAGATTCTGGATTGGGAGTGGGTTCTTACCCTTCTCGATCAAAGGACGACAATGTTGGTGTTGGTGGGGTTTTTTCGTTTCAATCGGTATCTTCAGGGCATGATTTTAATTCTAATTCCAAGCAAGTTAGAGAAAATTAG

Protein sequence

MDSGSGSLQSSSGGDEEYDSHHQQPQLVFPPSPLFFNLPSSSSSSCSSSSLLACSSSSSIPHHQQSLPNFHNYQNNHHLLPSFYDFPSSNYNFNPDSSSNSFVNLDVLRSAEPTHFKNPPDGSTQNQIPTIRSTPSTSSGALHPKVTTKKRTRASRRAPTTVLTTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGGVFSFQSVSSGHDFNSNSKQVREN

Homology

[Close]

BLAST of PI0028840 vs. ExPASy Swiss-Prot
Match: Q9LIE6 (VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.5e-05
Identity = 37/85 (43.53%), Postives = 47/85 (55.29%), Query Frame = 0


Query: 114 THFKNPPDGSTQNQIPTIRSTPSTSSGALHPKV-----TTKKRTRASRRAPTTVLTTDTT 173
           T F      ST     T   T S  S  L P+       T++R+RASRR PTT+L TDT+
Sbjct: 16  TFFTTSTTASTAVTTTTAGDTTSIDS-RLSPETGRVTKPTRRRSRASRRTPTTLLNTDTS 75

Query: 174 NFRAMVQEFTGIPSPPFTSGGSSYS 194
           NFRAMVQ++TG PS      G++ S
Sbjct: 76  NFRAMVQQYTGGPSAMAFGSGNTTS 99

[Close]

BLAST of PI0028840 vs. ExPASy TrEMBL
Match: A0A5D3E5M3 (Anaphase-promoting complex subunit cdh1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004870 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.3e-128
Identity = 256/277 (92.42%), Postives = 257/277 (92.78%), Query Frame = 0


Query: 1   MDSGSGSLQSSSGGDEEYDSHH-----------QQPQLVFPPSPLFFNLP--SSSSSSCS 60
           MDSGSGSLQSSSGGDEEYDSHH           QQPQLVFPPSPLFFNLP  SSSSSSCS
Sbjct: 1   MDSGSGSLQSSSGGDEEYDSHHHHHHHHQQQQQQQPQLVFPPSPLFFNLPSSSSSSSSCS 60

Query: 61  SSSLLACSSSSSIPHHQQSLPNFHNYQNN----HHLLPSFYDFPSSNYNFNPDSSSNSFV 120
           SSSLLAC SSSSIPHHQQSLPNFHNYQNN    HHLLPSFYDFPSSNYNFNPDSSSNSFV
Sbjct: 61  SSSLLAC-SSSSIPHHQQSLPNFHNYQNNNNHHHHLLPSFYDFPSSNYNFNPDSSSNSFV 120

Query: 121 NLDVLRSAEPTHFKNPPDGSTQNQIPTIRSTPSTSSGALHPKVTTKKRTRASRRAPTTVL 180
           NLDVLRS EPTHF+NPPDGSTQNQIPT RSTPSTSSGALHPKVTTKKRTRASRRAPTTVL
Sbjct: 121 NLDVLRSGEPTHFRNPPDGSTQNQIPTNRSTPSTSSGALHPKVTTKKRTRASRRAPTTVL 180

Query: 181 TTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGS 240
           TTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGS
Sbjct: 181 TTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGS 240

Query: 241 YPSRSKDDNVGVGGVFSFQSVSSGHDFNSNSKQVREN 261
           YPSRSKDDNVGVGGVFSFQSVSSGHDFNSNSKQVREN
Sbjct: 241 YPSRSKDDNVGVGGVFSFQSVSSGHDFNSNSKQVREN 276

[Close]

BLAST of PI0028840 vs. ExPASy TrEMBL
Match: A0A1S4E5L0 (anaphase-promoting complex subunit cdh1-like OS=Cucumis melo OX=3656 GN=LOC103503584 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.3e-128
Identity = 256/277 (92.42%), Postives = 257/277 (92.78%), Query Frame = 0


Query: 1   MDSGSGSLQSSSGGDEEYDSHH-----------QQPQLVFPPSPLFFNLP--SSSSSSCS 60
           MDSGSGSLQSSSGGDEEYDSHH           QQPQLVFPPSPLFFNLP  SSSSSSCS
Sbjct: 1   MDSGSGSLQSSSGGDEEYDSHHHHHHHHQQQQQQQPQLVFPPSPLFFNLPSSSSSSSSCS 60

Query: 61  SSSLLACSSSSSIPHHQQSLPNFHNYQNN----HHLLPSFYDFPSSNYNFNPDSSSNSFV 120
           SSSLLAC SSSSIPHHQQSLPNFHNYQNN    HHLLPSFYDFPSSNYNFNPDSSSNSFV
Sbjct: 61  SSSLLAC-SSSSIPHHQQSLPNFHNYQNNNNHHHHLLPSFYDFPSSNYNFNPDSSSNSFV 120

Query: 121 NLDVLRSAEPTHFKNPPDGSTQNQIPTIRSTPSTSSGALHPKVTTKKRTRASRRAPTTVL 180
           NLDVLRS EPTHF+NPPDGSTQNQIPT RSTPSTSSGALHPKVTTKKRTRASRRAPTTVL
Sbjct: 121 NLDVLRSGEPTHFRNPPDGSTQNQIPTNRSTPSTSSGALHPKVTTKKRTRASRRAPTTVL 180

Query: 181 TTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGS 240
           TTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGS
Sbjct: 181 TTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGS 240

Query: 241 YPSRSKDDNVGVGGVFSFQSVSSGHDFNSNSKQVREN 261
           YPSRSKDDNVGVGGVFSFQSVSSGHDFNSNSKQVREN
Sbjct: 241 YPSRSKDDNVGVGGVFSFQSVSSGHDFNSNSKQVREN 276

[Close]

BLAST of PI0028840 vs. ExPASy TrEMBL
Match: A0A0A0LJY7 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G895870 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 1.0e-116
Identity = 232/240 (96.67%), Postives = 233/240 (97.08%), Query Frame = 0


Query: 1   MDSGSGSLQSSSGGDEEYDS-HHQQPQLVFPPSPLFFNLP-SSSSSSCSSSSLLACSSSS 60
           MDSGSGSLQSSSGGDEEYDS HHQQPQLVFPPSPLFFNLP SSSSSSCSSSSLLA SSSS
Sbjct: 1   MDSGSGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLASSSSS 60

Query: 61  SIPHHQQSLPNFHNYQNNHHLLPSFYDFP-SSNYNFNPDSSSNSFVNLDVLRSAEPTHFK 120
           SIPHHQQSLP+FHNYQNNHHLLPSFYDFP SSNYNFNPDSSSNSFVNLDVLRS EPTHFK
Sbjct: 61  SIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYNFNPDSSSNSFVNLDVLRSGEPTHFK 120

Query: 121 NPPDGSTQNQIPTIRSTPSTSSGALHPKVTTKKRTRASRRAPTTVLTTDTTNFRAMVQEF 180
            PPDGSTQNQIPTIRSTPSTSSGALHPKV TKKRTRASRRAPTTVLTTDTTNFRAMVQEF
Sbjct: 121 TPPDGSTQNQIPTIRSTPSTSSGALHPKVNTKKRTRASRRAPTTVLTTDTTNFRAMVQEF 180

Query: 181 TGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGG 238
           TGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGG
Sbjct: 181 TGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGG 240

[Close]

BLAST of PI0028840 vs. ExPASy TrEMBL
Match: A0A6J1IVA8 (mucin-5AC-like OS=Cucurbita maxima OX=3661 GN=LOC111480291 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.7e-42
Identity = 150/303 (49.50%), Postives = 174/303 (57.43%), Query Frame = 0


Query: 1   MDSGSGSLQSSSGGDEEYDSH------------HQQPQLV-FPPSPLFFNLPSSSSSSCS 60
           MDSGSGSLQSSSGGD++YDSH             QQP L   PP PLFFN          
Sbjct: 1   MDSGSGSLQSSSGGDDDYDSHRRRHHHYHHQEQQQQPHLFPPPPPPLFFN---------- 60

Query: 61  SSSLLACSSSSSIPHHQQSLPNFHNYQNNHHLLPSFYDFPSS----NYNFNPDSSSNSFV 120
                     +++P H Q LP    +  +HH   + YDFPS+      NFNPD SSNSF+
Sbjct: 61  ----------ATMPPH-QPLP----FHLSHHNFQNLYDFPSNFNLQPTNFNPD-SSNSFL 120

Query: 121 NLDVLR------SAEP---THFKNP--PDGSTQN-QIPTIRSTPSTSSGALHPKVTTKKR 180
           NLD  R       +EP   T FK P   +GST + QIP   + PS +   LHPK TTKKR
Sbjct: 121 NLDDDRPNPTSLRSEPTTTTTFKTPISAEGSTHHTQIPNRSTNPSPT--GLHPKPTTKKR 180

Query: 181 TRASRRAPTTVLTTDTTNFRAMVQEFTGIPSPPFTSGG------SSYSRRFDLFGLVRTT 240
           TRASRRAPTTVLTTDTTNFRAMVQEFTGIPSPPFT+ G      SS+SRRFDLF  VR  
Sbjct: 181 TRASRRAPTTVLTTDTTNFRAMVQEFTGIPSPPFTAPGSSSSSSSSFSRRFDLFASVR-- 240

Query: 241 SNNSTATRLEDSGLGVGSYPSRSK-----------DDNVGV----------GGVFSFQSV 248
           +N +T T LE SG G   +PSRSK           ++NV +           G+FSFQSV
Sbjct: 241 ANTTTTTNLEPSGSGF--HPSRSKVQLFSSLNNTNNNNVTIDDQNTSRVQPAGIFSFQSV 271

[Close]

BLAST of PI0028840 vs. ExPASy TrEMBL
Match: A0A6J1II30 (uncharacterized protein LOC111476479 OS=Cucurbita maxima OX=3661 GN=LOC111476479 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.1e-41
Identity = 132/229 (57.64%), Postives = 140/229 (61.14%), Query Frame = 0


Query: 1   MDSGSGSLQSSSGGDEEYDSHHQQPQLVFPPSPLFFNLPSSSSSSCSSSSLLACSSSSSI 60
           MDSGS SLQSSSGGDE+YDSH   P    PP PLFFN                       
Sbjct: 1   MDSGSPSLQSSSGGDEDYDSHQPFPPPP-PPPPLFFN----------------------- 60

Query: 61  PHHQQSLPNFHNYQNNHHLLPS--FYDFPSSNYNFNPDSSSNSFVNLDVLRSAEPTHFKN 120
                  PN  +YQ   HLLPS  FYDFP S+Y FNP +S  S        +AEP     
Sbjct: 61  -------PN--SYQT--HLLPSSPFYDFP-SDYTFNPSNSGTS-----QPAAAEP----- 120

Query: 121 PPDGSTQNQIPTIRSTPSTSSGALHPKVTTKKRTRASRRAPTTVLTTDTTNFRAMVQEFT 180
                TQNQIP        SSG LHPK TTKKRTRASRRAPTTVLTTDTTNFRAMVQEFT
Sbjct: 121 -----TQNQIPI------RSSGVLHPKATTKKRTRASRRAPTTVLTTDTTNFRAMVQEFT 168

Query: 181 GIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSR 228
           GIPSPPFT+GGSSYSRRFDLF LV+TTS  ST T LE SG G+  Y SR
Sbjct: 181 GIPSPPFTAGGSSYSRRFDLFNLVKTTS--STPTILETSGSGL--YSSR 168

[Close]

BLAST of PI0028840 vs. NCBI nr
Match: XP_011652626.1 (uncharacterized protein DDB_G0271670 [Cucumis sativus] >KAE8651421.1 hypothetical protein Csa_001203 [Cucumis sativus])

HSP 1 Score: 468.0 bits (1203), Expect = 5.3e-128
Identity = 255/264 (96.59%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MDSGSGSLQSSSGGDEEYDS-HHQQPQLVFPPSPLFFNLP-SSSSSSCSSSSLLACSSSS 60
           MDSGSGSLQSSSGGDEEYDS HHQQPQLVFPPSPLFFNLP SSSSSSCSSSSLLA SSSS
Sbjct: 1   MDSGSGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLASSSSS 60

Query: 61  SIPHHQQSLPNFHNYQNNHHLLPSFYDFP-SSNYNFNPDSSSNSFVNLDVLRSAEPTHFK 120
           SIPHHQQSLP+FHNYQNNHHLLPSFYDFP SSNYNFNPDSSSNSFVNLDVLRS EPTHFK
Sbjct: 61  SIPHHQQSLPSFHNYQNNHHLLPSFYDFPASSNYNFNPDSSSNSFVNLDVLRSGEPTHFK 120

Query: 121 NPPDGSTQNQIPTIRSTPSTSSGALHPKVTTKKRTRASRRAPTTVLTTDTTNFRAMVQEF 180
            PPDGSTQNQIPTIRSTPSTSSGALHPKV TKKRTRASRRAPTTVLTTDTTNFRAMVQEF
Sbjct: 121 TPPDGSTQNQIPTIRSTPSTSSGALHPKVNTKKRTRASRRAPTTVLTTDTTNFRAMVQEF 180

Query: 181 TGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGG 240
           TGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGG
Sbjct: 181 TGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGG 240

Query: 241 VFSFQSVSSGHDFNSN-SKQVREN 261
           VFSFQSVSSGHDFNSN SKQVREN
Sbjct: 241 VFSFQSVSSGHDFNSNISKQVREN 264

[Close]

BLAST of PI0028840 vs. NCBI nr
Match: XP_016903526.1 (PREDICTED: anaphase-promoting complex subunit cdh1-like [Cucumis melo])

HSP 1 Score: 467.6 bits (1202), Expect = 6.9e-128
Identity = 256/277 (92.42%), Postives = 257/277 (92.78%), Query Frame = 0


Query: 1   MDSGSGSLQSSSGGDEEYDSHH-----------QQPQLVFPPSPLFFNLP--SSSSSSCS 60
           MDSGSGSLQSSSGGDEEYDSHH           QQPQLVFPPSPLFFNLP  SSSSSSCS
Sbjct: 1   MDSGSGSLQSSSGGDEEYDSHHHHHHHHQQQQQQQPQLVFPPSPLFFNLPSSSSSSSSCS 60

Query: 61  SSSLLACSSSSSIPHHQQSLPNFHNYQNN----HHLLPSFYDFPSSNYNFNPDSSSNSFV 120
           SSSLLAC SSSSIPHHQQSLPNFHNYQNN    HHLLPSFYDFPSSNYNFNPDSSSNSFV
Sbjct: 61  SSSLLAC-SSSSIPHHQQSLPNFHNYQNNNNHHHHLLPSFYDFPSSNYNFNPDSSSNSFV 120

Query: 121 NLDVLRSAEPTHFKNPPDGSTQNQIPTIRSTPSTSSGALHPKVTTKKRTRASRRAPTTVL 180
           NLDVLRS EPTHF+NPPDGSTQNQIPT RSTPSTSSGALHPKVTTKKRTRASRRAPTTVL
Sbjct: 121 NLDVLRSGEPTHFRNPPDGSTQNQIPTNRSTPSTSSGALHPKVTTKKRTRASRRAPTTVL 180

Query: 181 TTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGS 240
           TTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGS
Sbjct: 181 TTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGS 240

Query: 241 YPSRSKDDNVGVGGVFSFQSVSSGHDFNSNSKQVREN 261
           YPSRSKDDNVGVGGVFSFQSVSSGHDFNSNSKQVREN
Sbjct: 241 YPSRSKDDNVGVGGVFSFQSVSSGHDFNSNSKQVREN 276

[Close]

BLAST of PI0028840 vs. NCBI nr
Match: KAA0038603.1 (anaphase-promoting complex subunit cdh1-like [Cucumis melo var. makuwa] >TYK31202.1 anaphase-promoting complex subunit cdh1-like [Cucumis melo var. makuwa])

HSP 1 Score: 467.6 bits (1202), Expect = 6.9e-128
Identity = 256/277 (92.42%), Postives = 257/277 (92.78%), Query Frame = 0


Query: 1   MDSGSGSLQSSSGGDEEYDSHH-----------QQPQLVFPPSPLFFNLP--SSSSSSCS 60
           MDSGSGSLQSSSGGDEEYDSHH           QQPQLVFPPSPLFFNLP  SSSSSSCS
Sbjct: 1   MDSGSGSLQSSSGGDEEYDSHHHHHHHHQQQQQQQPQLVFPPSPLFFNLPSSSSSSSSCS 60

Query: 61  SSSLLACSSSSSIPHHQQSLPNFHNYQNN----HHLLPSFYDFPSSNYNFNPDSSSNSFV 120
           SSSLLAC SSSSIPHHQQSLPNFHNYQNN    HHLLPSFYDFPSSNYNFNPDSSSNSFV
Sbjct: 61  SSSLLAC-SSSSIPHHQQSLPNFHNYQNNNNHHHHLLPSFYDFPSSNYNFNPDSSSNSFV 120

Query: 121 NLDVLRSAEPTHFKNPPDGSTQNQIPTIRSTPSTSSGALHPKVTTKKRTRASRRAPTTVL 180
           NLDVLRS EPTHF+NPPDGSTQNQIPT RSTPSTSSGALHPKVTTKKRTRASRRAPTTVL
Sbjct: 121 NLDVLRSGEPTHFRNPPDGSTQNQIPTNRSTPSTSSGALHPKVTTKKRTRASRRAPTTVL 180

Query: 181 TTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGS 240
           TTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGS
Sbjct: 181 TTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGS 240

Query: 241 YPSRSKDDNVGVGGVFSFQSVSSGHDFNSNSKQVREN 261
           YPSRSKDDNVGVGGVFSFQSVSSGHDFNSNSKQVREN
Sbjct: 241 YPSRSKDDNVGVGGVFSFQSVSSGHDFNSNSKQVREN 276

[Close]

BLAST of PI0028840 vs. NCBI nr
Match: XP_038898813.1 (uncharacterized serine-rich protein C215.13-like [Benincasa hispida])

HSP 1 Score: 337.0 bits (863), Expect = 1.4e-88
Identity = 219/280 (78.21%), Postives = 228/280 (81.43%), Query Frame = 0


Query: 1   MDSGSGSLQSSSGGD--EEYD-SHHQQPQLVFPPSPLFFN---LP----------SSSSS 60
           MDSGSGSLQSSSG D  EEYD S H QPQL FPP PLFFN   +P          SSSSS
Sbjct: 1   MDSGSGSLQSSSGADEVEEYDSSSHHQPQL-FPPPPLFFNNNIIPFSSSSSSSSSSSSSS 60

Query: 61  SCSSSSLLACSSSSSIPHHQQSLPNFHNYQNNHHLLPSFYDFPSSNYNFNPDSSSNSFVN 120
           S SSSSLL CSSSSSIPH    LP FH YQ NHHLLPSFYDFPSS +NFNPD+SSNSFVN
Sbjct: 61  SSSSSSLLGCSSSSSIPH---QLP-FH-YQ-NHHLLPSFYDFPSSYHNFNPDNSSNSFVN 120

Query: 121 LDVLRSAEPTHFKNPP--DGSTQNQIPTIRSTPSTSSGALHPKVTTKKRTRASRRAPTTV 180
           LDVLRS EPTHFKNPP  DGSTQNQI  IRSTPS+SSGALHPKVTTKKRTRASRRAPTTV
Sbjct: 121 LDVLRS-EPTHFKNPPISDGSTQNQI-QIRSTPSSSSGALHPKVTTKKRTRASRRAPTTV 180

Query: 181 LTTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVG 240
           LTTDTTNFRAMVQEFTGIPSPPFT+GGSSYSRRFDLFGLVRT  NNS AT LE SGLGV 
Sbjct: 181 LTTDTTNFRAMVQEFTGIPSPPFTAGGSSYSRRFDLFGLVRT--NNSAATNLEASGLGV- 240

Query: 241 SYPSRSKDDNV-----GVGGVFSFQSVSSGHDFNSNSKQV 258
            YPSRSK DNV       GG+FSFQ+V SGHDFN+NSK+V
Sbjct: 241 -YPSRSKVDNVVRQPAETGGIFSFQTV-SGHDFNANSKEV 266

[Close]

BLAST of PI0028840 vs. NCBI nr
Match: XP_023524775.1 (probable serine/threonine-protein kinase MARK-A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.0 bits (471), Expect = 4.0e-43
Identity = 146/296 (49.32%), Postives = 169/296 (57.09%), Query Frame = 0


Query: 1   MDSGSGSLQSSSGGDEEYDSHH-----------QQPQLVF-PPSPLFFNLPSSSSSSCSS 60
           MDSGSGSLQSSSGGD++YDSHH           QQP L   PP PLFFN           
Sbjct: 1   MDSGSGSLQSSSGGDDDYDSHHHHHNHHHHQQQQQPHLFSPPPPPLFFN----------- 60

Query: 61  SSLLACSSSSSIPHHQQSLPNFHNYQNNHHLLPSFYDFPSS----NYNFNPDSSSNSFVN 120
            + +       +P H       HN+QN        YDFPS+      NFNPD SSNSF+N
Sbjct: 61  -ATIPPPPHQPLPFHLSP----HNFQN-------LYDFPSNFNLQPTNFNPD-SSNSFLN 120

Query: 121 LDVLRSAEPTHFKNP--PDGSTQN-QIPTIRSTPSTSSGALHPKVTTKKRTRASRRAPTT 180
           LD +R    T FK P   +GST + QIP   + PS +   LHPK TTKKRTRASRRAPTT
Sbjct: 121 LDDVRPNPTTTFKTPTAAEGSTHHTQIPNRSTNPSPT--GLHPKPTTKKRTRASRRAPTT 180

Query: 181 VLTTDTTNFRAMVQEFTGIPSPPFTSGG------SSYSRRFDLFGLVRTTSNNSTATRLE 240
           VLTTDTTNFRAMVQEFTGIPSPPFT+ G      SS+SRRFDLF  VR T+ N  A+   
Sbjct: 181 VLTTDTTNFRAMVQEFTGIPSPPFTAPGSSSSSSSSFSRRFDLFASVRATTTNIEASG-S 240

Query: 241 DSGLGVGSYPSRSK--------------DDNVGV----------GGVFSFQSVSSG 248
            SG G G +PSRSK              ++NV +           G+FSFQS+S G
Sbjct: 241 GSGSGSGFHPSRSKVQLFSSLNNNNSNNNNNVTIDNQNTSRVHPAGIFSFQSLSEG 269

[Close]

BLAST of PI0028840 vs. TAIR 10
Match: AT1G35830.1 (VQ motif-containing protein )

HSP 1 Score: 72.0 bits (175), Expect = 7.9e-13
Identity = 77/200 (38.50%), Postives = 95/200 (47.50%), Query Frame = 0


Query: 1   MDS-GSGSLQSSSGGDEEYDSHHQQPQLVFPPSPLFFNLPSSSSSSCSSSSLLACSSSSS 60
           MDS  SGSLQSSS   E   +   Q    F   P  F  P SSS+     + L+ SSSSS
Sbjct: 1   MDSCNSGSLQSSSDDHESSSTGAPQDHSSFFLPP--FQPPPSSSTYYGDPTTLSSSSSSS 60

Query: 61  IPHHQQSLPNFHNYQNNHHLLPSFYDFPSSNYNFNPDSSSNSFVNLDVLRSAEPTHFKNP 120
                     + N+ NN                          ++ D+L     TH   P
Sbjct: 61  --------ATYLNFVNN-------------------------LISDDILNQ---THLLPP 120

Query: 121 PDGSTQNQIPTIRSTPSTSSGALHPKVTTKKRTRASRRAPTTVLTTDTTNFRAMVQEFTG 180
                    P     P   S + +P    +KRTRASRRAPTTVLTTDT+NFRAMVQEFTG
Sbjct: 121 Q--------PPPPPPPPPPSSSRNP----RKRTRASRRAPTTVLTTDTSNFRAMVQEFTG 150

Query: 181 IPSPPFTSGGSSYSRRFDLF 200
           +P+ PF+   SS +RRFD+F
Sbjct: 181 VPASPFSHPFSSTTRRFDIF 150

[Close]

BLAST of PI0028840 vs. TAIR 10
Match: AT5G65170.1 (VQ motif-containing protein )

HSP 1 Score: 69.3 bits (168), Expect = 5.1e-12
Identity = 82/225 (36.44%), Postives = 110/225 (48.89%), Query Frame = 0


Query: 1   MDSG-SGSLQSSSGG-----DEEYDSHHQQPQLVFPPSPLFFNLPSSSSSSCSSSSLLAC 60
           M+SG S S+QSSSGG      EEYDS   Q            ++ +  + + ++++    
Sbjct: 1   MESGNSSSMQSSSGGGGGGDQEEYDSRADQ------------SISALFNHNNNNNNPTTV 60

Query: 61  SSSSSIPHHQQSLPNFHNYQNNHHLLPSFYDFPSSNYNFNPDSSSNSFVNLDVLR----- 120
           S + ++P    +L    NY            F +S    NP  S+ +    D  R     
Sbjct: 61  SPNIAVPTQLDAL--IANY------------FNTSWSADNPLWSTTATQPTDGSRPVPPP 120

Query: 121 -SAEPTHFKNPPDGSTQ-----NQIPTIRSTPSTSSGALHPKVTTKKRTRASRRAPTTVL 180
            S+E   F NP   + +     N    I S P+     L      KKR+R SRRAPTTVL
Sbjct: 121 ISSEQVFFTNPLQQNLRTVPNTNTTSPICSVPTDKKNGLATTRNPKKRSRVSRRAPTTVL 180

Query: 181 TTDTTNFRAMVQEFTGIPSPPFTSGGSSYSR-RFDLFGLVRTTSN 208
           TTDT+NFRAMVQEFTG PS PFT   SS+ R RFDLFG   ++S+
Sbjct: 181 TTDTSNFRAMVQEFTGNPSTPFTGLSSSFPRSRFDLFGSSSSSSS 199

[Close]

BLAST of PI0028840 vs. TAIR 10
Match: AT4G39720.1 (VQ motif-containing protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.9e-11
Identity = 81/223 (36.32%), Postives = 111/223 (49.78%), Query Frame = 0


Query: 1   MDSG-SGSLQSSS----GGDEEYDSHHQQPQLVFPPSPLFFNLPSSSSSSCSSSSLLACS 60
           M+SG S S+QSSS    GG+EEYDS                    ++  S S+      +
Sbjct: 1   MESGNSSSMQSSSGGGGGGEEEYDSR-------------------AADQSISAFFDHHNN 60

Query: 61  SSSSIPHHQQSLPNF--HNYQNNHHLLPSFYDFPSSNYNFNPDSSSNSFVNLDVLRSAEP 120
             SSIP  QQ+  N    ++ NN+ L+P  Y        FN    +N+F  L V +  +P
Sbjct: 61  HVSSIPTPQQNHRNLLHFDHNNNNSLIPPNY--------FN----NNTF--LPVNQQPDP 120

Query: 121 THFKNPPDGSTQNQIPTIRSTPSTSSGALHPKVTTKKRTRASRRAPTTVLTTDTTNFRAM 180
               +    S  + +P     P+ + G +     TKKR+RASRRAPTTVLTTDT+NFRAM
Sbjct: 121 ISQLDLRTSSATSSLP-----PTNNIGVIK---KTKKRSRASRRAPTTVLTTDTSNFRAM 180

Query: 181 VQEFTGIPSPPFTSGGS--SYSRRFDLFGLVRTTSNNSTATRL 215
           VQEFTGIP+PP  +  S  + +R     GL  ++ N      L
Sbjct: 181 VQEFTGIPAPPLFNNNSIVNTTRLNTFLGLSSSSPNTYNTNNL 182

[Close]

BLAST of PI0028840 vs. TAIR 10
Match: AT4G15120.1 (VQ motif-containing protein )

HSP 1 Score: 52.4 bits (124), Expect = 6.5e-07
Identity = 40/90 (44.44%), Postives = 53/90 (58.89%), Query Frame = 0


Query: 130 TIRSTPSTSSGALHP--------KVTTKKRTRASRRAPTTVLTTDTTNFRAMVQEFTGIP 189
           T+ +T +T++ A  P           T++R+RASRR PTT+  TDT NFRAMVQ+FTG P
Sbjct: 24  TVTTTTTTATSADSPLSPDNRRVAKPTRRRSRASRRTPTTLFNTDTANFRAMVQQFTGGP 83

Query: 190 SPPFTSGGSSYSRRFDLFGLVRTTSNNSTA 212
           S    + GSS S  F L      TS++ TA
Sbjct: 84  SA--VAFGSSPSSGFSL------TSSDPTA 105

[Close]

BLAST of PI0028840 vs. TAIR 10
Match: AT3G22160.1 (VQ motif-containing protein )

HSP 1 Score: 50.1 bits (118), Expect = 3.2e-06
Identity = 37/85 (43.53%), Postives = 47/85 (55.29%), Query Frame = 0


Query: 114 THFKNPPDGSTQNQIPTIRSTPSTSSGALHPKV-----TTKKRTRASRRAPTTVLTTDTT 173
           T F      ST     T   T S  S  L P+       T++R+RASRR PTT+L TDT+
Sbjct: 16  TFFTTSTTASTAVTTTTAGDTTSIDS-RLSPETGRVTKPTRRRSRASRRTPTTLLNTDTS 75

Query: 174 NFRAMVQEFTGIPSPPFTSGGSSYS 194
           NFRAMVQ++TG PS      G++ S
Sbjct: 76  NFRAMVQQYTGGPSAMAFGSGNTTS 99

The following BLAST results are available for this feature:

BLAST of PI0028840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIE6	4.5e-05	43.53	VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1	[more]

BLAST of PI0028840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E5M3	3.3e-128	92.42	Anaphase-promoting complex subunit cdh1-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S4E5L0	3.3e-128	92.42	anaphase-promoting complex subunit cdh1-like OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A0A0LJY7	1.0e-116	96.67	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G895870 PE=4 SV=...	[more]
A0A6J1IVA8	3.7e-42	49.50	mucin-5AC-like OS=Cucurbita maxima OX=3661 GN=LOC111480291 PE=4 SV=1	[more]
A0A6J1II30	1.1e-41	57.64	uncharacterized protein LOC111476479 OS=Cucurbita maxima OX=3661 GN=LOC111476479...	[more]

BLAST of PI0028840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652626.1	5.3e-128	96.59	uncharacterized protein DDB_G0271670 [Cucumis sativus] >KAE8651421.1 hypothetica...	[more]
XP_016903526.1	6.9e-128	92.42	PREDICTED: anaphase-promoting complex subunit cdh1-like [Cucumis melo]	[more]
KAA0038603.1	6.9e-128	92.42	anaphase-promoting complex subunit cdh1-like [Cucumis melo var. makuwa] >TYK3120...	[more]
XP_038898813.1	1.4e-88	78.21	uncharacterized serine-rich protein C215.13-like [Benincasa hispida]	[more]
XP_023524775.1	4.0e-43	49.32	probable serine/threonine-protein kinase MARK-A [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0028840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G35830.1	7.9e-13	38.50	VQ motif-containing protein	[more]
AT5G65170.1	5.1e-12	36.44	VQ motif-containing protein	[more]
AT4G39720.1	1.9e-11	36.32	VQ motif-containing protein	[more]
AT4G15120.1	6.5e-07	44.44	VQ motif-containing protein	[more]
AT3G22160.1	3.2e-06	43.53	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 157..184 e-value: 9.5E-13 score: 47.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR33179:SF4	VQ MOTIF-CONTAINING PROTEIN	coord: 1..219
IPR039609	VQ motif-containing protein 15/22	PANTHER	PTHR33179	VQ MOTIF-CONTAINING PROTEIN	coord: 1..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028840.1	PI0028840.1	mRNA