PI0028754 (gene) Melon (PI 482460) v1

Overview


Name	PI0028754
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Copper-binding family protein
Location	chr05: 905204 .. 909712 (+)
RNA-Seq Expression	PI0028754
Synteny	PI0028754

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACACAATAATAGGCCAGCAAGTTAACCAGTACTATGCTAAACAAAATTATAAATTGAAAACAAAATCTGACATATTGGAAATAAAGTTTCACAATTATTAGAGGATAAAAATGGTATTATGGGTATATAAGTAAAGTCGGTTATCACTATTGGTGTGAGACATTTTAGGTGATTTATAAACTTAGTTGTGTTTTAAATAAGGATACTTACAACACACATGCTTCACATCACCCCTATTTAAGATATATATAGGTGTTCATCTTATATTGAGCTATATCTCTATATACAACTAATTGAAGACACGAAGTTCGATGCTTCAAATTAACAAATATTATATATGTGATACAACATAGCTCGTTAAAGAAAAAAATATCAATTTACAATGTTGACATTAGAAGTTTGATTCCCCACTTACATGTTAAAAAATTACCTAAAACTGACTTAATTATTTCAAGTTTAATAGACTGGTGGTGGTGGTGGTGGTGGTGGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGTGTATTATATATTACACAAATTACAAATAATAGATTTTTAATGCATTCTTTTACATAATCTGTCCTAAAAGTCTGGTGTGCATTTGAGGGTACAAATTTTGCCCTAAAAAATGTGCAAGACAATGAAAAAAACCTCCACTAATGAACTTGATCTTCATTCTGCATTGCATGGCAATTATCCTCACGTGAATAGCACGTGCACTGACATGGCGTGGCATATTGCACATGCTCTCTTTTATTTTTATTTTTATTTCCATTTTCATTTATCTTTCTGAGCTTCTTAAAAAAATTAATAAAAAAATATACTTTTTGAGCATCTTTGAATTATAATAATATTACAAGCACATGGACCAAGCTGGCTGCTCTTTAAAATATTATTATTATTATTATTAAGAATTTTGAATCTTCCAATCATGTTCTAGAAACAGGCACCGGTGGGCCAGGATTTTGCTTTTCTTTTGGGGAACCAAAGATTTACGAACCCCACGACATTGTTACCGTTTTTTGGTTTAAATAATATTTTGATACTCAAATTTTGTATTTTGTTATATTTTGATCTTAAATTTCTTAAAACATCTATTTGAATTCTTAATCTTCTAAGAAAAGCTTACTTTTGTTATTGTCATTAGAATTTTGTTAACTTTTCAATAGAATAACAACGTGGCTTCTATATTTAGATGACTAAACTATAGATTCATCATGTTAGTTAAATTGATTAATAATTGTGAGAATATTTATTTCAAATTTTGTAGAGTTTGTTTTTTATATAGAGTTGTTTTTAATTTTATTTCATCTCGCTATAGATGTTAACACCAATATGCGAGTTCTATTTTTTTATCATACTCAATGTTCTTATGATTTGTTTCAAGATTCCATTTTTTAAAAAAATCAAGATAAAGTGCGTGACGGGACATGAGAGAAAAAAAAAACAAAATTAGTTTTTTTTTGTTTATTTGATTATGTTTTGGAGAGCTAGTTTTGTGTTGATTATGTTTTTTGGTTGGCATAAAAGATTTATAAATAAATTAGCAAGATTTGTTTTGTTACTATAAATACCACCTCGTCATTTCGTTAAAAAGTCAATAGAATCGTAACGACAATGACCAAAGTAAGATATTTTTTCAAAGTTCATAGACTAAAACAAACGTTTTTAAAAGTTTAAAGACCATAATATAACAATATACAAAATTTAGGAATCATAATAAGAATTAAATCCCGTTTTTATCTATAAATTTTGGAACTCTTTTCGGGGATAGAACTATCGACTCTTCTCAACAAATTTAAAGGTGTTTTTAGCTTATCCATATATTAAAATATATTTAACTTCTATTTTCTATTCATTTATGGCAAAATAATCAATTTATTTATAAATGTAGCAAAATGAAATAAAAAATCTATTTCATTGTTGTGTTATCTTCCTATGTTTATAAATATTTTAGTCAATCTTTTTATTTAAAGTAATTTTTCCTATTTCCATTTTGTCACTTAAACAACGTTGGAAGTTGGAAGTTTTTGATAGATAACATTTTTGATTTTCATCTATGCTTATATTTTCTTGTATTTTCTATTATGACAATTGTCCCCCTCAAGAAAACACTTAAATTTGTAATAAAATTTTCGAAAAAGAAAATAGTTTTCGAAAATTCTCTCCAATTTCCAAACTGTAAAATTCACATAGGTTAAAAACAAACTTGAGTTCACAATCAAATTTTAAAAATAAAAAATATTTTTGAAATGTTTTTTAATTCTAATAATGTTGGGTTGTCTCTTTTGAAAACATTAAAAAAAATAGATAACAAAACAACACTTATTTGTTGAATTAGTATTTATAAACTTCAAATTTAAAAATATGGAGAGAAATTAGTTTTTAAAACTTCACTTAAGACACAGAATAAAAAAATAAAAAAAAAGTCTTCAAATAATTAAACTTTAATAAAATTGAAATTGAAATTGACTTGTATACATCCCCAATTGTTGTTGATGGTCTGCTAAGGATATCAAATTATCAGTATTTATATATTAAGTTATTAACTTGTGTCTCTCTTTAAATGGTGTCAATTTTCATCAACTAAAAAAGAACTTTGAGATTATTCTAATTATGCAAAATCAGATTTATGAAGCTAGAGAGCCGACATTTATTGGATCAAGTGATGCATTAAATATATTATGAATATGCAGTAAAGTCTTGAAATTTTTTAATACTTGATCTGTCAACTCAAAACCAGCATGTGATTTCATCAAACCATTTTTTTTTTTTCAAATCGATATAATTAGTTTGAATTAAGTATTTTTATCATTAATTAGTACATCCTAAACAAATAATTAATATTATCAAAGTGTAGTCACATGAGAGGTTTAGGTTTATCCAATTTCAAGTCTAAATAATTGCATCAGTCAATTTATACTGTTGATTAGTGATGCATGAATGGCTATTTTCACTTGTTTCATTTTAAAATCAACTTCAAATTACTTCTATTAACAAATTTTTATCCCAAATAAATATTAAAATGATAAGAAAATTTCCACAAACAAGTGGGAAAAGATACAAAAAAATTAAAAATTAAAATTTAAAAATAAAAAATTAAGGAATTGTGAAAAGGCCACATAACAAACTTTTATATTTTATCAAAAATAGTTATCAATGTTTTATCAATATATGAATAAATGCTTATATAAGTTTATCAATGTCTATCATTGTCCTATCATTTATAAAATATGAAAAAAATTTATATTTTATAAATAGTTTGGTTTATTGTGCTATATTTGAAAATGATCTAATATTAGTGAATCTTTGCACTTAAAATAGGTTCACACATATATGAGAATTACTTAATGATACTGAATTTAAAATGAAACATATAAAAAAATTATATGGATTGATTTATGAAATAGTTTAATATATTTTATAAACGAAGTGTTAGTTTTAAGTTTAGTTGGATGGAAAATTTTAGATTTGAGATATGTATCTATTTAGTCCTTAAAATTCAAACTATTACAATAATCGACAGATTTACTATAGGCATAGCGGCACTTGCAATCAACCATATGCTTCATATATATATCATAATATGAATACCATTAGCTAAACTAAAAAAAATTTGGTTTTTAGTTCCATCTGAACCTAGTTTCAAGCTCTAATTTTTACATTTTTTCATTTTTTTAAAATTATTTTTATTGTATTATAAAGTTCCTATAATAAAATTTCTAAATCCACCATGACTAGCAAAGTTATTTCCTCCACAATTTAGATGATTTAATTATTTACTTTATCCGCAGACTTAACTTTTAAGTAAATCAATAATTTTATAAAAAAACAAAAGAAAACTCGTCATACGAACCTCGAAAATATAGATTTGATTCTCTACCTGGGTAAAAAAAATTTCTCATTGTCATGTATATACGTGTATTATAATAATATTTTAAAAAAACATAGTCGCATATTGTGTGATTAAACAGCACATATATAAATGTGCATCGATTCATTTGTAAGGACAGAGGACAGGGAGGGAGAGCTTTGGGAATGGGGAAACTGGTGATGAGCATTGGGAAAGTATTTTCATGTTTCATAAATACAACAGATTCTTCCACTTCCTGCTTATACAGATTGGAAATTGAAGACAGTAATTTTGATCAGAAACAGCCATTAATGGCTAAACAAACAACATCAACTCATCTTCTAGGATTCAAGGATGTGATTACTCGTCAAAACAAAACTCTGCCTCTTCAATTCAACCCCAAGGTCAGATCACATTCCTAACCCTTTTTCCTCCTCCTGAATCTGCTTCTATTATTTACTGTTGGTTTAAACTTTAAACCTGCTTCATTACACTCATTTTGTTTCTTATAACTTCAATTTTGATTTACTTTTGTCTCTGATTATTTTTTCTATAGGTTTGTTTTGGTTTTTAA

mRNA sequence

ATGGCACACAATAATAGGCCAGCAAACTGGTGGTGGTGGTGGTGGTGGTGGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGATTCTTCCACTTCCTGCTTATACAGATTGGAAATTGAAGACAGTAATTTTGATCAGAAACAGCCATTAATGGCTAAACAAACAACATCAACTCATCTTCTAGGATTCAAGGATGTGATTACTCGTCAAAACAAAACTCTGCCTCTTCAATTCAACCCCAAGGTTTGTTTTGGTTTTTAA

Coding sequence (CDS)

ATGGCACACAATAATAGGCCAGCAAACTGGTGGTGGTGGTGGTGGTGGTGGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGATTCTTCCACTTCCTGCTTATACAGATTGGAAATTGAAGACAGTAATTTTGATCAGAAACAGCCATTAATGGCTAAACAAACAACATCAACTCATCTTCTAGGATTCAAGGATGTGATTACTCGTCAAAACAAAACTCTGCCTCTTCAATTCAACCCCAAGGTTTGTTTTGGTTTTTAA

Protein sequence

MAHNNRPANWWWWWWWWGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDSSTSCLYRLEIEDSNFDQKQPLMAKQTTSTHLLGFKDVITRQNKTLPLQFNPKVCFGF

Homology

[Close]

BLAST of PI0028754 vs. ExPASy TrEMBL
Match: A0A0A0LIU8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005290 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 4.3e-16
Identity = 53/63 (84.13%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 52  DSSTSC-LYRLEIEDS-NFDQKQPLMAKQTTST--HLLGFKDVITRQNKTLPLQFNPKVC 111
           DSSTSC LYRLEIEDS NFDQKQPLM KQTTST   LLGFKDVIT QN+TLPLQFNPK  
Sbjct: 20  DSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFKDVITHQNETLPLQFNPK-- 79

[Close]

BLAST of PI0028754 vs. ExPASy TrEMBL
Match: A0A1S3C8H9 (uncharacterized protein LOC103497691 OS=Cucumis melo OX=3656 GN=LOC103497691 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.8e-14
Identity = 48/58 (82.76%), Postives = 50/58 (86.21%), Query Frame = 0


Query: 53  SSTSCLYRLEIEDS-NFDQKQPLMAKQTTST--HLLGFKDVITRQNKTL-PLQFNPKV 107
           S++ CLYR EIEDS NFDQKQPLMAKQTTST   LLGFKDVIT QNKTL PLQFNPKV
Sbjct: 23  STSCCLYRFEIEDSNNFDQKQPLMAKQTTSTTHDLLGFKDVITHQNKTLRPLQFNPKV 80

[Close]

BLAST of PI0028754 vs. NCBI nr
Match: XP_031736582.1 (uncharacterized protein LOC116402031 [Cucumis sativus] >KAE8651518.1 hypothetical protein Csa_019330 [Cucumis sativus])

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-15
Identity = 51/59 (86.44%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 52  DSSTSC-LYRLEIEDS-NFDQKQPLMAKQTTST--HLLGFKDVITRQNKTLPLQFNPKV 107
           DSSTSC LYRLEIEDS NFDQKQPLM KQTTST   LLGFKDVIT QN+TLPLQFNPKV
Sbjct: 20  DSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFKDVITHQNETLPLQFNPKV 78

[Close]

BLAST of PI0028754 vs. NCBI nr
Match: XP_008458177.1 (PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo] >KAA0061568.1 copper-binding family protein [Cucumis melo var. makuwa])

HSP 1 Score: 88.6 bits (218), Expect = 3.7e-14
Identity = 48/58 (82.76%), Postives = 50/58 (86.21%), Query Frame = 0


Query: 53  SSTSCLYRLEIEDS-NFDQKQPLMAKQTTST--HLLGFKDVITRQNKTL-PLQFNPKV 107
           S++ CLYR EIEDS NFDQKQPLMAKQTTST   LLGFKDVIT QNKTL PLQFNPKV
Sbjct: 23  STSCCLYRFEIEDSNNFDQKQPLMAKQTTSTTHDLLGFKDVITHQNKTLRPLQFNPKV 80

The following BLAST results are available for this feature:

BLAST of PI0028754 vs.


Match Name	E-value	Identity	Description

BLAST of PI0028754 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIU8	4.3e-16	84.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005290 PE=4 SV=1	[more]
A0A1S3C8H9	1.8e-14	82.76	uncharacterized protein LOC103497691 OS=Cucumis melo OX=3656 GN=LOC103497691 PE=...	[more]

BLAST of PI0028754 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031736582.1	1.5e-15	86.44	uncharacterized protein LOC116402031 [Cucumis sativus] >KAE8651518.1 hypothetica...	[more]
XP_008458177.1	3.7e-14	82.76	PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo] >KAA0061568.1 cop...	[more]

BLAST of PI0028754 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028754.1	PI0028754.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding