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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGTGCAAATTGCCAATGAACGAGCTCAGTTTACCTGAATTAAACGAGCTCCACTAATTCACAAGCATGTACATAACATATATTTTCACTTACCATTGTTTCTCAGGAAGTTGCCAATAAACAAGCAACATACGTTCAAGCTACAAAACGAATCAGCTCGAAAATTCACGTTACATACAATTCACAAATAAAAATCACCAATTCCAGACAGCACCTCGTATGTCCCAAGGATAAATTGGTAAGGCGAAGAGAGAAACTTCGGAAGGTTGGGGAGATGGAATGAACTTCAGTTGGAGCTGATCGTGTGAGTCTGTATATTCGATTATTACAAACAAAGCCTACCTGGTCAGATCGCCAGCTCAAATTCAGGAATGGAATCCAATGATTATGGATGCAGGGCAAGGGATCTCAAGTGGAGCTTCTTCAATGGCGACGGAAGATGAACGGAAGCGAGAGCGGTGTGTGTAG mRNA sequence ATGTGCAAATTGCCAATGAACGAGCTCACCTACCTGGTCAGATCGCCAGCTCAAATTCAGGAATGGAATCCAATGATTATGGATGCAGGGCAAGGGATCTCAAGTGGAGCTTCTTCAATGGCGACGGAAGATGAACGGAAGCGAGAGCGGTGTGTGTAG Coding sequence (CDS) ATGTGCAAATTGCCAATGAACGAGCTCACCTACCTGGTCAGATCGCCAGCTCAAATTCAGGAATGGAATCCAATGATTATGGATGCAGGGCAAGGGATCTCAAGTGGAGCTTCTTCAATGGCGACGGAAGATGAACGGAAGCGAGAGCGGTGTGTGTAG Protein sequence MCKLPMNELTYLVRSPAQIQEWNPMIMDAGQGISSGASSMATEDERKRERCV
Homology
BLAST of PI0028530 vs. ExPASy TrEMBL
Match: A0A0A0LEQ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G892710 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.3e-11 Identity = 41/60 (68.33%), Postives = 44/60 (73.33%), Query Frame = 0 Query: 3 KLPMNELTY--------------LVRSPAQIQEWNPMIMDAGQGISSGASSMATEDERKR 49 KLP+NE TY LVRSPAQI++WNPMIMDAG GISSGASSMATEDERKR Sbjct: 5 KLPINEATYVQATNESARKSTGCLVRSPAQIRKWNPMIMDAGGGISSGASSMATEDERKR 64
BLAST of PI0028530 vs. NCBI nr
Match: KGN60268.1 (hypothetical protein Csa_001550 [Cucumis sativus]) HSP 1 Score: 76.3 bits (186), Expect = 9.0e-11 Identity = 41/60 (68.33%), Postives = 44/60 (73.33%), Query Frame = 0 Query: 3 KLPMNELTY--------------LVRSPAQIQEWNPMIMDAGQGISSGASSMATEDERKR 49 KLP+NE TY LVRSPAQI++WNPMIMDAG GISSGASSMATEDERKR Sbjct: 5 KLPINEATYVQATNESARKSTGCLVRSPAQIRKWNPMIMDAGGGISSGASSMATEDERKR 64
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LEQ5 | 4.3e-11 | 68.33 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G892710 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KGN60268.1 | 9.0e-11 | 68.33 | hypothetical protein Csa_001550 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 30..52 |
Relationships
The following mRNA feature(s) are a part of this gene:
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