PI0028529 (gene) Melon (PI 482460) v1

Overview
NamePI0028529
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionStress response protein NST1-like
Locationchr06: 15716268 .. 15716777 (+)
RNA-Seq ExpressionPI0028529
SyntenyPI0028529
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAAAGGACGGGGGCAAGCGTCTTGAAGAATGCTCTCTACCCAACGACGTCGCCTTGATTCATCATAAGATCAAGGAGAAACTCTCCAAGGTCTCTCTTGGGAAGACGAAGGAGATGATGGCGGTGCTGAAGACTGCCATCCAAAAGAAAGAGAAGAACAAAAAGATGCTCGTCCAATTGGACAAACAGGTTGTGGAGCTCCCAGCGAAATGTCAGGCGCTGGGAGGAGAGAAAGATCTCGAGACTTTGGCGGAAGACCTCGAGGAAGAGCTGGAGGCGATGAGTCCAATTGAACAAGGACCATTGCCTAAGAAACAAAAGGGGATCGCCAGGCCATCCAAGAGAAAGAAGAAAACGGGGATGTCCAAACCTGAGGAGCCCCAACCTAGCAGCGAAGCAAAAGCAAAAGAGCCCTCAATCCACACTATCATCAAAATAGAAAAATGGCTCTTTCCCTTCAACGGACCCCTTTCTGACTTCCTCTACGTGGCAATCCAGGTGTTTTGA

mRNA sequence

ATGCTAAAGGACGGGGGCAAGCGTCTTGAAGAATGCTCTCTACCCAACGACGTCGCCTTGATTCATCATAAGATCAAGGAGAAACTCTCCAAGGTCTCTCTTGGGAAGACGAAGGAGATGATGGCGGTGCTGAAGACTGCCATCCAAAAGAAAGAGAAGAACAAAAAGATGCTCGTCCAATTGGACAAACAGGTTGTGGAGCTCCCAGCGAAATGTCAGGCGCTGGGAGGAGAGAAAGATCTCGAGACTTTGGCGGAAGACCTCGAGGAAGAGCTGGAGGCGATGAGTCCAATTGAACAAGGACCATTGCCTAAGAAACAAAAGGGGATCGCCAGGCCATCCAAGAGAAAGAAGAAAACGGGGATGTCCAAACCTGAGGAGCCCCAACCTAGCAGCGAAGCAAAAGCAAAAGAGCCCTCAATCCACACTATCATCAAAATAGAAAAATGGCTCTTTCCCTTCAACGGACCCCTTTCTGACTTCCTCTACGTGGCAATCCAGGTGTTTTGA

Coding sequence (CDS)

ATGCTAAAGGACGGGGGCAAGCGTCTTGAAGAATGCTCTCTACCCAACGACGTCGCCTTGATTCATCATAAGATCAAGGAGAAACTCTCCAAGGTCTCTCTTGGGAAGACGAAGGAGATGATGGCGGTGCTGAAGACTGCCATCCAAAAGAAAGAGAAGAACAAAAAGATGCTCGTCCAATTGGACAAACAGGTTGTGGAGCTCCCAGCGAAATGTCAGGCGCTGGGAGGAGAGAAAGATCTCGAGACTTTGGCGGAAGACCTCGAGGAAGAGCTGGAGGCGATGAGTCCAATTGAACAAGGACCATTGCCTAAGAAACAAAAGGGGATCGCCAGGCCATCCAAGAGAAAGAAGAAAACGGGGATGTCCAAACCTGAGGAGCCCCAACCTAGCAGCGAAGCAAAAGCAAAAGAGCCCTCAATCCACACTATCATCAAAATAGAAAAATGGCTCTTTCCCTTCAACGGACCCCTTTCTGACTTCCTCTACGTGGCAATCCAGGTGTTTTGA

Protein sequence

MLKDGGKRLEECSLPNDVALIHHKIKEKLSKVSLGKTKEMMAVLKTAIQKKEKNKKMLVQLDKQVVELPAKCQALGGEKDLETLAEDLEEELEAMSPIEQGPLPKKQKGIARPSKRKKKTGMSKPEEPQPSSEAKAKEPSIHTIIKIEKWLFPFNGPLSDFLYVAIQVF
Homology
[Close]
BLAST of PI0028529 vs. ExPASy TrEMBL
Match: A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.4e-04
Identity = 46/154 (29.87%), Postives = 84/154 (54.55%), Query Frame = 0 

Query: 25  IKEKLSKVSLGKTKEMMAVLKTAIQK----KEKNKKMLVQLDKQVVELPAKCQALGGEK- 84
           +K + +KV +G  +      KT + +    K+K ++ L  L +QV  +  + +    ++ 
Sbjct: 102 LKHEANKVLVGHREASKKEAKTKLAEIQTTKKKKQETLASLSEQVESVVTRSKVAEHQEV 161

Query: 85  -DLETLAEDLEEELEAMSPIEQGPLPKKQKGIA-----RPSKRKKKTGMSKPEEPQPSSE 144
             ++ + E+   E+E MSP+   P P ++KG+      + SK K+K G S+P++ Q  ++
Sbjct: 162 DRVDVMVEEFSREIEGMSPLGPRPRP-EEKGLTNIEFPKKSKSKRKAGTSRPKDIQRGNK 221

Query: 145 AKAKEPSIHTIIKIEKWLFPFNGPLSDFLYVAIQ 168
             A++  +  +IKIEK L PFN PL +FLY  I+
Sbjct: 222 MSAQK--LDKLIKIEKGLLPFNDPLLNFLYGLIK 252

[Close]
BLAST of PI0028529 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 55.1 bits (131), Expect = 7.0e-04
Identity = 46/154 (29.87%), Postives = 84/154 (54.55%), Query Frame = 0 

Query: 25  IKEKLSKVSLGKTKEMMAVLKTAIQK----KEKNKKMLVQLDKQVVELPAKCQALGGEK- 84
           +K + +KV +G  +      KT + +    K+K ++ L  L +QV  +  + +    ++ 
Sbjct: 102 LKHEANKVLVGHREASKKEAKTKLAEIQTTKKKKQETLASLSEQVESVVTRSKVAEHQEV 161

Query: 85  -DLETLAEDLEEELEAMSPIEQGPLPKKQKGIA-----RPSKRKKKTGMSKPEEPQPSSE 144
             ++ + E+   E+E MSP+   P P ++KG+      + SK K+K G S+P++ Q  ++
Sbjct: 162 DRVDVMVEEFSREIEGMSPLGPRPRP-EEKGLTNIEFPKKSKSKRKAGTSRPKDIQRGNK 221

Query: 145 AKAKEPSIHTIIKIEKWLFPFNGPLSDFLYVAIQ 168
             A++  +  +IKIEK L PFN PL +FLY  I+
Sbjct: 222 MSAQK--LDKLIKIEKGLLPFNDPLLNFLYGLIK 252

The following BLAST results are available for this feature:
BLAST of PI0028529 vs.
Match NameE-valueIdentityDescription
BLAST of PI0028529 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DQE73.4e-0429.87Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
BLAST of PI0028529 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK25768.17.0e-0429.87stress response protein NST1-like [Cucumis melo var. makuwa][more]
BLAST of PI0028529 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..139

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0028529.1PI0028529.1mRNA