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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAAAACAACAACACATCTTCGGAATCGGTTCCTGCATTTTTGTGCATGCCGGGATTTGATTTTCAGGTATTTACGAATCTAATATTTTCTCTCTGTACTTTTCTTTCCCCTTGAGATTTTGTTTTTTTATTTTTTAATTGATTACAGGCTAGATTTCTATGGGTTTCGAGGATTTTTCCTTGTGTTGGAGATAGACTGGAGCCGCTTATCGCCGGTGTCGCTTCCGGCGAGGTTTAG mRNA sequence ATGAAAAACAACAACACATCTTCGGAATCGGTTCCTGCATTTTTGTGCATGCCGGGATTTGATTTTCAGGCTAGATTTCTATGGGTTTCGAGGATTTTTCCTTGTGTTGGAGATAGACTGGAGCCGCTTATCGCCGGTGTCGCTTCCGGCGAGGTTTAG Coding sequence (CDS) ATGAAAAACAACAACACATCTTCGGAATCGGTTCCTGCATTTTTGTGCATGCCGGGATTTGATTTTCAGGCTAGATTTCTATGGGTTTCGAGGATTTTTCCTTGTGTTGGAGATAGACTGGAGCCGCTTATCGCCGGTGTCGCTTCCGGCGAGGTTTAG Protein sequence MKNNNTSSESVPAFLCMPGFDFQARFLWVSRIFPCVGDRLEPLIAGVASGEV
Homology
BLAST of PI0028448 vs. ExPASy TrEMBL
Match: A0A0A0KQU5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606700 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.3e-12 Identity = 41/50 (82.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query: 4 NNTSSESVPAFLCMPGFDFQARFLWVSRIFPCVGDR-LEPLIAGVASGEV 53
NNTSSESVPAFLC GF FQARFLWVSRIFPCV DR LE IAGV GEV
Sbjct: 3 NNTSSESVPAFLCFSGFYFQARFLWVSRIFPCVRDRVLELHIAGVGPGEV 52
BLAST of PI0028448 vs. NCBI nr
Match: KGN51980.1 (hypothetical protein Csa_007755 [Cucumis sativus]) HSP 1 Score: 80.5 bits (197), Expect = 4.8e-12 Identity = 41/50 (82.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query: 4 NNTSSESVPAFLCMPGFDFQARFLWVSRIFPCVGDR-LEPLIAGVASGEV 53
NNTSSESVPAFLC GF FQARFLWVSRIFPCV DR LE IAGV GEV
Sbjct: 3 NNTSSESVPAFLCFSGFYFQARFLWVSRIFPCVRDRVLELHIAGVGPGEV 52
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KQU5 | 2.3e-12 | 82.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606700 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN51980.1 | 4.8e-12 | 82.00 | hypothetical protein Csa_007755 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | COILS | Coil | Coil | coord: 45..52 |
Relationships
The following mRNA feature(s) are a part of this gene:
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