PI0028442 (gene) Melon (PI 482460) v1

Overview


Name	PI0028442
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	histone deacetylase HDT1-like
Location	chr11: 5184192 .. 5187898 (+)
RNA-Seq Expression	PI0028442
Synteny	PI0028442

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAAAGAAGCTGGCGGCAATTCCCTTATAAATTGCTTCAAACTTCGTTTTGCACTTTGCTTCTCTCTCATCATTGTGTTCTTAAACAGTTCAATCCTTCGTTCTTTCTCCTAAACATTTCTAAAACCCTAAATTTTTCTTCCTTCACTATTAATGGAGTTTTGGGGTAAGTTTCTTTTACATATTCCATCTATGCTTTTGTTTGTGCTATATGTTTTCTTCATCAGTTTTTGTTTATCGAAAGCTTTAGCACGTTCTTGAATAAATTTGTTTGCTTCTTTTGGGAGTACATATACTAGGCTAATTCGGAAGCAGATGCATAGAATTTTATGGTTTTTGAGCAATGTTTCAATATTTAGTGTATGGTTATTTCTTGAGAGTATGTAAAAGTTCATAAGGGGGTTTGGGATTTTAGGTGTTGAAGTTAAGCCTGGTCAGGCACTCTCTGTGCAGCCTGGAGACCTAAACTATGTGCATCTATCACAGGTATTTTAGTTATTATAAAGTTCTTTTCCCATTTGAATCACTGATTCTCCTTGTTTGGAATGATTAATGAACTGAGATTGTTTTATGCAGGCGACTCTAGGTGAATTGAAGAAGGACAAAGCAAATGAACCCGTGACTATTTTTTTGAAGATTGATGACCAGAAGCTTGTTCTGGGAGTTCTCTCTGCCGACAAGTTTCCTCAGATATCATTTGATCTCGTGTTTGAGAAGGAATTTGAGCTCTCTCACAATGGGAAGGGTGGAAGTATTTACTGTTTGGGATATCGGGCTCCCATGGAGGACCAAGGACAATATCCTTTTCAATTCGAGGATTTATGTTTCCCATGTCTTGTATGGGTTTTATGATTAAGTAGTCAATTAGTAAGCTTTCTTATTATGGAATTGGTTTTTCACACTTAGTATCCATTGTTTTCCTTAACTTTTGTCCCCTGTCTTCTGTTTTCCACGGAAGATTATTCTGGTAAGTTTTTAAACATTCATAAATTTAGCTTCTTTTGCATTCTTGTTCGAGTTTCTGAAATTGATTAGCTGAGTATGTGTTATCTCATCTCAGATTCTGACTTTGGCTCGGAGGATGAGGAACTTGGAATGCTATCTGCTGAGAATGGTAAATGCATTTGATTATGTAAATAAATCTAAAAGTGTTTTGGTGGGATGAAATATTCTCGGCACTGTGCTTATCATTTCTAGTTAAAATTTACTTTCAGGAAAACCTAGCGAGAAGGAAAAGTCTATTGGTGGAAAAATTTTTGGTCTGAAACCGGAATCTTCAAAGAAAGCAGATGCTAAGTCTCTTGAGCCGAGCAAAGTGGAAGATGATGACTCCGAAGAGGATGACTCCGAAGATGAGGATTCTGATGACGAGTCTGACGAGGTGATTCTTTCACTTCAGTTATTTCTAGGTGCAGTGACTTTTGAATGAAAAGTGACTGGTGCCTTGCTTTAAGAAGCGAGCTGCCCATTCTTCCTGAACTGCCCTTCTTATTTTTTTCCTCCATGAATTGTCTAATTATTTTCATAGGAAACCAACAAGTACTCATAAGCAATGTTCTTTTTCTCCCAAAGCATTTAAGCACTATTTGGGAGGGTTAATCCAATGCATACATATTGCATATGTAGACGTGGGTATTAACTACAAACGATGACTCTTTCTTTTTCTGTGAGTTCCCAACACTGGATTGCAGTAATGCTGCAGTTGGTTCTCTACAGTCAACTTTTTAACTATCTTTTTTGTGTGAAGTCATTAGGATGTGAACTTATATTCTCATTTACCCCCCTCCTACTGTATCCCGATTTTGTCAATTGCTGGCTTTTGAAGCTTATTTCATGTCATATAACCTAAAAGTTTGTGAATAAAAAATGCTTTGGGTGTTTCCTTTATGAAAATTGTCCCTTGGTTTGCTTTTCAAAACAAGGCTTTGGGGAAATAGATATGAAGCTCTAAACATAATTGTTCTTGTAATCAAGCGACAGTTCTAGGGCTGCTCAATTGGCTTTCTTAGTGTTGAAATTAAGTGTTTATAAATGCAACAAGTGTTTATAAACACTAAGAAAATCAATCTAGACCACCCTTATTTTTTTATGAGACTCAAAATTTTAATTGTTACGGTAGTTGTTAGGCTCTAGGAAAGACATCATCTTTGTCATGGTGACCAATTTAGGCTTTCAATTGCTTCTGCAATGTTCTCATAGCATATTTGTGAATCCTTTCCCATTAGTTGCTGAGGAGTTTTGTAGATGATAAAATTATATGGTTTGTTTTAATTGCGCTATTTTGGTTATATGCAGGAAATGCTTGAGGGGGACAGTGACTCTGACGATGAAGATGATGGTACTGACAGTGAGGAGGAGACACCGAAGAAGGTGTGTTTTGATCCTAATTTAATTTCTGTATGTAGCTGTTAATTTGAAAATTTGAAAAATTTATATTTATTCTTCTATATTTGTTTTCTTCTAGCATTATTTTTATTAACGTCTTCTTTTGTAGGTTAATGAATCCTCCAAGAAGAGGTCAAACGAGTCTGCCTCCAAAACCCCTGTTTCTAAGAAGGCAAAGTTAGCTTCGGCTGAGAAAACTGGTGATTTCCTTCATCCATTCATTTATTTCATGCTAACACTAATAAGCATTATTTCAATGATGGCTGCTCAGTATTTTACTTCTAGTATATTAACGTATCTTGTCACATATTTTCATCTAGCAAACAAAATGAACAAAAGTTAAAAAGTATATAGGCCATTTTAAAGTATAAGGACAAAAATAAACCAAGGCTGAAGATGCTGGTCTCAAATAGTATTTAGGCCTTATTTATGTTATTTATTAATACTGAATTTATTTACCCGTATCCAGAGCCGTCTAGAACTGTCTTATATGACTATCTTTTCTCTTTCTTTATCGAGCAACCACATTATGCTAGCCTTGGTTTGGACAGTTTTAGCTTCTGAAATTAATTAGTGCTTAACTTTGTTAGTTGTTTGTTGTGTCAGATTCAAAGAAGGGAGGCCATACGGCTACTCCCCATCCTGCTAAGAAACCTGCGAAAACTCCTGGCAAAGCAGAGACCCCTAAATCCGGAGGCCAGTTTTCTTGCACATCCTGCGATAGGTATATACATCTTTTTAAAGATTATTTAGGGCGTGCTTAAAAATGAAATTTGAAAGTGTTTCAAAAGATTTTTTGACTGGTTGCTAAACCCTTCAAACAAACCTTTTTCAAAATGGCTTATTTTCAAAAGTTGGACAGTAATACACTTAGGTCAGTAGAGGAAGAAGGGGTCCTGAGGTTGCTGATTTCCTTTCCTATGTTGTTTTTTAGGTCATTTGGTTCTGATGGTGCCCTTCAGTCACACAGTAAAGCTAAGCACGGTGCTAAATGAAATGAAAGAAGTGCTGAATGATAACATATTATTTTGCAGCTCCAATATGTTATACTCTCTAGATAGGTTACGATCGTGGCCGAGATTTTGTGTTGAGCGTTTGGATCGTAAAACGAGATGCGATTGTTTGTTCACATTGAGGAAGAAATTCAGTTTGATTTATGTATGTTTTGGGTCAAATTAATGTGTTCGTTCATACAAATTTTCCCCCTAGAAATTAGTTATGTGGTTGGCATCTGTTTTAGGACTTCGATATAAATTTTGGAACACCTATATTTCGTCTTTTCTTTTTCTTTTAAATGAATGAAAGCTGAAAATTTTGTTCTTC

mRNA sequence

CGAAAGAAGCTGGCGGCAATTCCCTTATAAATTGCTTCAAACTTCGTTTTGCACTTTGCTTCTCTCTCATCATTGTGTTCTTAAACAGTTCAATCCTTCGTTCTTTCTCCTAAACATTTCTAAAACCCTAAATTTTTCTTCCTTCACTATTAATGGAGTTTTGGGGTGTTGAAGTTAAGCCTGGTCAGGCACTCTCTGTGCAGCCTGGAGACCTAAACTATGTGCATCTATCACAGGCGACTCTAGGTGAATTGAAGAAGGACAAAGCAAATGAACCCGTGACTATTTTTTTGAAGATTGATGACCAGAAGCTTGTTCTGGGAGTTCTCTCTGCCGACAAGTTTCCTCAGATATCATTTGATCTCGTGTTTGAGAAGGAATTTGAGCTCTCTCACAATGGGAAGGGTGGAAGTATTTACTGTTTGGGATATCGGGCTCCCATGGAGGACCAAGGACAGGAAGATTATTCTGATTCTGACTTTGGCTCGGAGGATGAGGAACTTGGAATGCTATCTGCTGAGAATGGAAAACCTAGCGAGAAGGAAAAGTCTATTGGTGGAAAAATTTTTGGTCTGAAACCGGAATCTTCAAAGAAAGCAGATGCTAAGTCTCTTGAGCCGAGCAAAGTGGAAGATGATGACTCCGAAGAGGATGACTCCGAAGATGAGGATTCTGATGACGAGTCTGACGAGGAAATGCTTGAGGGGGACAGTGACTCTGACGATGAAGATGATGGTACTGACAGTGAGGAGGAGACACCGAAGAAGGTTAATGAATCCTCCAAGAAGAGGTCAAACGAGTCTGCCTCCAAAACCCCTGTTTCTAAGAAGGCAAAGTTAGCTTCGGCTGAGAAAACTGATTCAAAGAAGGGAGGCCATACGGCTACTCCCCATCCTGCTAAGAAACCTGCGAAAACTCCTGGCAAAGCAGAGACCCCTAAATCCGGAGGCCAGTTTTCTTGCACATCCTGCGATAGGTCATTTGGTTCTGATGGTGCCCTTCAGTCACACAGTAAAGCTAAGCACGGTGCTAAATGAAATGAAAGAAGTGCTGAATGATAACATATTATTTTGCAGCTCCAATATGTTATACTCTCTAGATAGGTTACGATCGTGGCCGAGATTTTGTGTTGAGCGTTTGGATCGTAAAACGAGATGCGATTGTTTGTTCACATTGAGGAAGAAATTCAGTTTGATTTATGTATGTTTTGGGTCAAATTAATGTGTTCGTTCATACAAATTTTCCCCCTAGAAATTAGTTATGTGGTTGGCATCTGTTTTAGGACTTCGATATAAATTTTGGAACACCTATATTTCGTCTTTTCTTTTTCTTTTAAATGAATGAAAGCTGAAAATTTTGTTCTTC

Coding sequence (CDS)

ATGGAGTTTTGGGGTGTTGAAGTTAAGCCTGGTCAGGCACTCTCTGTGCAGCCTGGAGACCTAAACTATGTGCATCTATCACAGGCGACTCTAGGTGAATTGAAGAAGGACAAAGCAAATGAACCCGTGACTATTTTTTTGAAGATTGATGACCAGAAGCTTGTTCTGGGAGTTCTCTCTGCCGACAAGTTTCCTCAGATATCATTTGATCTCGTGTTTGAGAAGGAATTTGAGCTCTCTCACAATGGGAAGGGTGGAAGTATTTACTGTTTGGGATATCGGGCTCCCATGGAGGACCAAGGACAGGAAGATTATTCTGATTCTGACTTTGGCTCGGAGGATGAGGAACTTGGAATGCTATCTGCTGAGAATGGAAAACCTAGCGAGAAGGAAAAGTCTATTGGTGGAAAAATTTTTGGTCTGAAACCGGAATCTTCAAAGAAAGCAGATGCTAAGTCTCTTGAGCCGAGCAAAGTGGAAGATGATGACTCCGAAGAGGATGACTCCGAAGATGAGGATTCTGATGACGAGTCTGACGAGGAAATGCTTGAGGGGGACAGTGACTCTGACGATGAAGATGATGGTACTGACAGTGAGGAGGAGACACCGAAGAAGGTTAATGAATCCTCCAAGAAGAGGTCAAACGAGTCTGCCTCCAAAACCCCTGTTTCTAAGAAGGCAAAGTTAGCTTCGGCTGAGAAAACTGATTCAAAGAAGGGAGGCCATACGGCTACTCCCCATCCTGCTAAGAAACCTGCGAAAACTCCTGGCAAAGCAGAGACCCCTAAATCCGGAGGCCAGTTTTCTTGCACATCCTGCGATAGGTCATTTGGTTCTGATGGTGCCCTTCAGTCACACAGTAAAGCTAAGCACGGTGCTAAATGA

Protein sequence

MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYSDSDFGSEDEELGMLSAENGKPSEKEKSIGGKIFGLKPESSKKADAKSLEPSKVEDDDSEEDDSEDEDSDDESDEEMLEGDSDSDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVSKKAKLASAEKTDSKKGGHTATPHPAKKPAKTPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHGAK

Homology

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BLAST of PI0028442 vs. ExPASy Swiss-Prot
Match: Q6V9I6 (Histone deacetylase HDT1 OS=Solanum chacoense OX=4108 GN=HDT1 PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 5.7e-57
Identity = 154/296 (52.03%), Postives = 195/296 (65.88%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWG EVK G+ L+VQPGD   +HLSQA+LGELKKDK +E V + + ID +KLVLG L+
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDK-SESVCLSVNIDGKKLVLGTLN 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYSDSDFGSEDEELGML 120
           ++K PQ  FDLVF+++FELSHN K GS+Y  GY+A    + +ED  D D+   DE++ + 
Sbjct: 61  SEKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDDED-DYDESDEDIPLT 120

Query: 121 SAENGKPSEKEKSIGGKIFGLKPESSKKADAKSLEPSKVEDDDSEEDDSEDEDSDDESDE 180
            A +GKP  KE    GK    K  +S K   + +EP+K         D EDE SDD+   
Sbjct: 121 LANSGKPEPKE---AGKSNAGKDSASGKQKVRIVEPTK---------DDEDESSDDD--- 180

Query: 181 EMLEGDSD-SDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVS-KKAKLASAEKTDSK 240
                DSD  +DEDD  DSEEETPKK  E +K+R  +SA+KTPV+ KKAKL + +KTD K
Sbjct: 181 -----DSDMGEDEDDSDDSEEETPKKA-EPAKRRKADSATKTPVTDKKAKLTTPQKTDGK 240

Query: 241 K-GGHTATPHPAKKPAKTPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHGA 294
           K GGH ATPHP+K+ +K      TPKS G   C  C+RSFGS+GAL SHSKAKH A
Sbjct: 241 KGGGHVATPHPSKQASK------TPKSAGSHHCKPCNRSFGSEGALDSHSKAKHSA 267

[Close]

BLAST of PI0028442 vs. ExPASy Swiss-Prot
Match: Q8LJS2 (Histone deacetylase HDT1 OS=Glycine max OX=3847 GN=HDT1 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 7.5e-57
Identity = 150/303 (49.50%), Postives = 195/303 (64.36%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDL--NYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGV 60
           MEFWGVEVK GQ ++V P D   +Y+H+SQ  LGE KKDK NEPV ++LK+ +QK+VLG 
Sbjct: 1   MEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEAKKDKPNEPVVLYLKVGEQKIVLGT 60

Query: 61  LSADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYSDSDFGSEDEELG 120
           LS D  P +S DLV + + ELSH  K  S++  GY+    +    D+SDS    EDEEL 
Sbjct: 61  LSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYKVLTGNDNASDFSDS--SEEDEELA 120

Query: 121 MLSAENGKPSEKEKSIGGKIFGLKPESSKK---ADAKSLEPSKVEDDDSEEDDSEDEDSD 180
           +   +NGKP  K +  G K+   KP  S     A AK+ +P K EDDDS+++  +D   +
Sbjct: 121 LEGQDNGKPELKAE--GAKV--TKPSKSIPKIGAPAKAADPKKDEDDDSDDESDDDLAGE 180

Query: 181 DES-DEEMLEGDSDSDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVS-KKAKLASAE 240
           DES   + ++ DS+S++E DG D  EETP K  +  KKR NESA+KTP+S KKAK A+ E
Sbjct: 181 DESGSSDEMDDDSNSEEESDGDD--EETPAKKVDQGKKRPNESAAKTPISAKKAKTATPE 240

Query: 241 KTDSKKGGHTATPHPAKKPAKTPG--KAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKH 295
           KTD KK  H ATPHP+KK  KTP   K +TP S GQ SC SC +SF ++  LQ H KAKH
Sbjct: 241 KTDGKKSVHVATPHPSKKGGKTPNSTKGQTPNSAGQLSCASCKKSFTNEAGLQQHKKAKH 295

[Close]

BLAST of PI0028442 vs. ExPASy Swiss-Prot
Match: Q9M4U5 (Histone deacetylase HDT2 OS=Zea mays OX=4577 GN=HDT2 PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.9e-48
Identity = 151/312 (48.40%), Postives = 198/312 (63.46%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWG+EVKPG  +  +PG    +H+SQA LGE KK   ++   +++K+DD+KL +G LS
Sbjct: 1   MEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK---SDSALMYVKVDDKKLAIGTLS 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYSDSDFGSEDEELGM- 120
            DK+PQI FDLVF KEFELSH  K  S++  GY+     +G E   D D   E+EEL + 
Sbjct: 61  IDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQPIEGDE--MDLDSEDEEEELNIP 120

Query: 121 LSAENGKP--SEKEKSIGGKIFGLKPESSKKADAKSLEPSKVEDDDSEEDDSEDEDSDDE 180
           +  ENGK    E++K+    +     +SS   + KS + S   D+D E DDS+++DSDD 
Sbjct: 121 VIKENGKADGKEEQKNQEKAVAATASKSSLGLEKKSKDDSDDSDED-ESDDSDEDDSDDS 180

Query: 181 SDEEML---EGDSDSDDEDDGTDSEEE---TPKKVNESSKKRSNESASKTPVS-KKAKLA 240
            + E L   EGD DS DEDD +D +EE   TPKK  E+ KKR  E+A KTP+S KKAK+A
Sbjct: 181 DEGEGLSPDEGDDDSSDEDDTSDDDEEETPTPKK-PEAGKKRGAENALKTPLSDKKAKVA 240

Query: 241 S--AEKTDSKKGG-HTATPHPAKKPAKTPGK-----AETPKSGGQFSCTSCDRSFGSDGA 295
           +  A+KT  KKG  H ATPHPAK   KTP        ++PKSGG   C SC ++F S+ A
Sbjct: 241 TPPAQKTGGKKGATHVATPHPAK--GKTPANNDKLTEKSPKSGGSVPCKSCSKTFNSEMA 300

[Close]

BLAST of PI0028442 vs. ExPASy Swiss-Prot
Match: O24591 (Histone deacetylase HDT1 OS=Zea mays OX=4577 GN=HDT1 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.3e-45
Identity = 151/316 (47.78%), Postives = 193/316 (61.08%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWG+EVKPG  +  +PG    +HLSQA LGE KK   ++   +++KIDDQKL +G LS
Sbjct: 1   MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKK---SDNALMYVKIDDQKLAIGTLS 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYSDSDFGSEDEELGM- 120
            DK P I FDL+F+KEFELSH  K  S++  GY+  +E   +ED  D D   EDEEL + 
Sbjct: 61  VDKNPHIQFDLIFDKEFELSHTSKTTSVFFTGYK--VEQPFEEDEMDLDSEDEDEELNVP 120

Query: 121 LSAENGKPSEKEKSIGGKIFGLKPESSKKADAKSLEPSK--VEDDDSEEDDSEDEDSD-- 180
           +  ENGK  EK++           E +  A +KS   SK   +DDDS+ED+++D D D  
Sbjct: 121 VVKENGKADEKKQK--------SQEKAVAAPSKSSPDSKKSKDDDDSDEDETDDSDEDET 180

Query: 181 DESDEEML--EGDSDSDDEDDGTDSEEE---TPKKVNESSKKRSNESASKTPVS-KKAKL 240
           D+SDE +   EGD DS DEDD +D EEE   TPKK     K+ +  S  KTP+S KKAK+
Sbjct: 181 DDSDEGLSSEEGDDDSSDEDDTSDDEEEDTPTPKKPEVGKKRPAESSVLKTPLSDKKAKV 240

Query: 241 A--SAEKTDSKKGG--HTATPHPAK--------KPAKTPGKAETPKSGGQFSCTSCDRSF 294
           A  S++KT  KKG   H ATPHPAK        K  K+P  A  PKSGG   C  C +SF
Sbjct: 241 ATPSSQKTGGKKGAAVHVATPHPAKGKTIVNNDKSVKSPKSA--PKSGGSVPCKPCSKSF 300

[Close]

BLAST of PI0028442 vs. ExPASy Swiss-Prot
Match: Q9M4U4 (Histone deacetylase HDT3 OS=Zea mays OX=4577 GN=HDT3 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 6.6e-45
Identity = 152/317 (47.95%), Postives = 193/317 (60.88%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWG+EVKPG  +  +PG    +HLSQA LGE KK   ++   +++KIDDQKL +G LS
Sbjct: 1   MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKK---SDNALMYVKIDDQKLAIGTLS 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYSDSDFGSEDEELGML 120
            DK P I FDL+F+KEFELSH  K  S++  GY+  +E   +ED  D D   EDEEL + 
Sbjct: 61  VDKNPHIQFDLIFDKEFELSHTSKTTSVFFTGYK--VEQPFEEDEMDLDSEDEDEELNVP 120

Query: 121 SA-ENGKPSEKEKSIGGKIFGLKPESSKKADAKSLEPSK--VEDDDSEEDDSEDEDSD-- 180
           +  ENGK  EK++           E +  A +KS   SK   +DDDS+ED+++D D D  
Sbjct: 121 AVKENGKADEKKQK--------SQEKAVAAPSKSSPDSKKSKDDDDSDEDETDDSDEDET 180

Query: 181 DESDEEML--EGDSDSDDEDDGTDSEEE---TPKKVNESSKKRSNESASKTPVS-KKAKL 240
           D+SDE +   EGD DS DEDD +D EEE   TPKK     K+ +  S  KTP+S KKAK+
Sbjct: 181 DDSDEGLSPEEGDDDSSDEDDTSDDEEEDTPTPKKPEVGKKRAAESSVLKTPLSDKKAKV 240

Query: 241 A--SAEKTDSKKGG--HTATPHPAK--------KPAKTPGKAETPKSGGQFSCTSCDRSF 295
           A  S++KT  KKG   H ATPHPAK        K  K+P  A  PKSG    C SC +SF
Sbjct: 241 ATPSSQKTGGKKGAAVHVATPHPAKGKTIVNNDKSVKSPKSA--PKSG--VPCKSCSKSF 300

[Close]

BLAST of PI0028442 vs. ExPASy TrEMBL
Match: A0A1S3C9I3 (histone deacetylase HDT1-like OS=Cucumis melo OX=3656 GN=LOC103497974 PE=3 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 1.7e-141
Identity = 279/295 (94.58%), Postives = 290/295 (98.31%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWGVEVKPGQALSVQPGD+NYVHLSQATLG+LKKDKAN+PVTIFLKIDDQKLVLGVLS
Sbjct: 1   MEFWGVEVKPGQALSVQPGDMNYVHLSQATLGDLKKDKANDPVTIFLKIDDQKLVLGVLS 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYSDSDFGSEDEELGML 120
           ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQE+YSDSDFGSEDEELG+L
Sbjct: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEEYSDSDFGSEDEELGLL 120

Query: 121 SAENGKPSEKEKSIGGKIFGLKPESSKKADAKSLEPSKVEDDDSEEDDSEDEDSD-DESD 180
           SAENGKPS+KEKSIGGKIFGLKPESSKKADAKS+EPSK EDDDSE+DDS DE SD DESD
Sbjct: 121 SAENGKPSDKEKSIGGKIFGLKPESSKKADAKSIEPSKEEDDDSEDDDSSDEGSDSDESD 180

Query: 181 EEMLEGDSDSDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVSKKAKLASAEKTDSKK 240
           EEMLEGDSDSDDED+GTDSEEETPKKVNESSKKRSNESASKTPVSKKAKLASAEKTDSKK
Sbjct: 181 EEMLEGDSDSDDEDEGTDSEEETPKKVNESSKKRSNESASKTPVSKKAKLASAEKTDSKK 240

Query: 241 GGHTATPHPAKKPAKTPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHGAK 295
           GGHTATPHPAKKPAK+PGKAETPKSGGQFSC +CDRSFGSDGALQSHSKAKHGAK
Sbjct: 241 GGHTATPHPAKKPAKSPGKAETPKSGGQFSCATCDRSFGSDGALQSHSKAKHGAK 295

[Close]

BLAST of PI0028442 vs. ExPASy TrEMBL
Match: A0A0A0KGM8 (Histone deacetylase 2a OS=Cucumis sativus OX=3659 GN=Csa_6G150550 PE=3 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 7.3e-140
Identity = 279/296 (94.26%), Postives = 286/296 (96.62%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWGVEVKPGQ LSVQPGD+NYVHLSQATLG+LKKDKANEPVTIFLKIDDQKLVLGVLS
Sbjct: 1   MEFWGVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLS 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYSDSDFGSEDEELGML 120
           ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQE++SDSDFGSEDEELGML
Sbjct: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEEFSDSDFGSEDEELGML 120

Query: 121 SAENGKPSEKEKSIGGKIFGLKPESSKKADAKSLEPSKVEDDDSEEDDSEDE--DSDDES 180
           SAENGK SEKEKSIGGKIFGLKPESSKKADAKS+ PSK EDDDSE+DDS DE  DSDD S
Sbjct: 121 SAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVS 180

Query: 181 DEEMLEGDSDSDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVSKKAKLASAEKTDSK 240
           DEEML GDSDSDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVSKK KLASAEKTDSK
Sbjct: 181 DEEMLGGDSDSDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSK 240

Query: 241 KGGHTATPHPAKKPAKTPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHGAK 295
           KGGHTATPHPAKKPAK+PGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHGAK
Sbjct: 241 KGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHGAK 296

[Close]

BLAST of PI0028442 vs. ExPASy TrEMBL
Match: A0A5A7SSE8 (Histone deacetylase HDT1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00220 PE=3 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 5.9e-121
Identity = 259/303 (85.48%), Postives = 275/303 (90.76%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWGVEVKPGQALSVQPGD+NYVHLSQATLG+LKKDKAN+PVTIFLKIDDQKLVLGVLS
Sbjct: 1   MEFWGVEVKPGQALSVQPGDMNYVHLSQATLGDLKKDKANDPVTIFLKIDDQKLVLGVLS 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYS----DSDFGSEDEE 120
           ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQ  +      SDFGSEDEE
Sbjct: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQYPFQFENMYSDFGSEDEE 120

Query: 121 LGMLSAENGKPSEKEKSIGGKIFGLKPESSKKADAKSLEPSKVEDDDSEEDDSEDEDSD- 180
           LG+LSAENGKPS+KEKSIGGKIFGLKPESSKKADAKS+EPSK EDDDSE+DDS DE SD 
Sbjct: 121 LGLLSAENGKPSDKEKSIGGKIFGLKPESSKKADAKSIEPSKEEDDDSEDDDSSDEGSDS 180

Query: 181 DESDEEMLEGDS-DSDDEDDGTDSEEETPKKVNESSKKRSNESASKTP--VSKKAKLASA 240
           DESDEEMLEGDS DSD+EDD ++S+EETPKKV ES+KKR NESA+KT    +KKAKLA+ 
Sbjct: 181 DESDEEMLEGDSGDSDEEDDDSESDEETPKKV-ESAKKRLNESATKTTPLPAKKAKLATP 240

Query: 241 EKTDSKKGGHTATPHPAKKPAKTP-GKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKH 295
           EKTDSKKGGHTATPHPAKK  KTP  K ETPKSGGQFSC SCDRSF SDGALQSHSKAKH
Sbjct: 241 EKTDSKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFVSDGALQSHSKAKH 300

[Close]

BLAST of PI0028442 vs. ExPASy TrEMBL
Match: A0A6J1CG52 (histone deacetylase HDT1-like OS=Momordica charantia OX=3673 GN=LOC111011215 PE=3 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 9.7e-116
Identity = 241/297 (81.14%), Postives = 265/297 (89.23%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWGVEVKPGQAL+V+PGD  Y+HLSQATLGE+KKDKANE VTIFLKI DQKLVLGVLS
Sbjct: 1   MEFWGVEVKPGQALAVKPGDQKYLHLSQATLGEIKKDKANESVTIFLKIGDQKLVLGVLS 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYSDSDFGSEDEELGML 120
           A+KFPQ+SFDLVFEKEFELSHNGK GSIYCLGY+A  EDQ  E+Y DSDFGSEDEEL + 
Sbjct: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSIYCLGYQASAEDQEHEEYLDSDFGSEDEELALH 120

Query: 121 SAENGKPSEKEKSIGGKIFGLKPESSKKADAKSLEPSKV-EDDDSEEDD--SEDEDSDDE 180
            A+NGKPS+KEK+I  K+  +KPESSKKAD K L+PSK  EDDDSE+DD   ED+DSDDE
Sbjct: 121 PAQNGKPSQKEKAIVEKLNAMKPESSKKADVKPLDPSKEDEDDDSEDDDESDEDDDSDDE 180

Query: 181 SDEEMLEGDSDSDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVSKKAKLASAEKTDS 240
           SDEEML  DSDSDDEDDGT+S+EETPKKV ES+KKRSN+SASKTP+SKKAKLASAEKTD+
Sbjct: 181 SDEEMLGADSDSDDEDDGTESDEETPKKV-ESNKKRSNDSASKTPLSKKAKLASAEKTDA 240

Query: 241 KKGGHTATPHPAKKPAKTPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHGAK 295
           KKGGHTATPHPAKKPAKT GK ETPKSGGQFSC SCD+SFGSDGALQSHSKAKH  K
Sbjct: 241 KKGGHTATPHPAKKPAKTAGKTETPKSGGQFSCKSCDKSFGSDGALQSHSKAKHAGK 296

[Close]

BLAST of PI0028442 vs. ExPASy TrEMBL
Match: A0A6J1H533 (histone deacetylase HDT1-like OS=Cucurbita moschata OX=3662 GN=LOC111459656 PE=3 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 3.2e-111
Identity = 235/295 (79.66%), Postives = 258/295 (87.46%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWGVEVKPGQALSV+PGD  Y+HLSQATLGELKKDK+ E VTIFLKID+QKLVLG+LS
Sbjct: 1   MEFWGVEVKPGQALSVKPGDQKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGILS 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYSDSDFGSEDEELGML 120
           A+KFPQ+SFDLVFEKEFELSHNGK GSIYC+GY+A  EDQ  E+YSDSDFGSEDEEL + 
Sbjct: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSIYCMGYQASAEDQEHEEYSDSDFGSEDEELALQ 120

Query: 121 SAENGKPSEK-EKSIGGKIFGLKPESSKKADAKSLEPSKV-EDDDSEEDD-SEDEDSDDE 180
              NGKPS+K EKSI GK   LKPE+SKK  +KSLEPSK  EDDDSE+DD S+DEDS DE
Sbjct: 121 HVPNGKPSQKEEKSIVGKHSSLKPETSKKTHSKSLEPSKEDEDDDSEDDDESDDEDSSDE 180

Query: 181 SDEEMLEGDSDSDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVSKKAKLASAEKTDS 240
           SDEEML  DSDSDDEDD  +SEEETPK+  ES+KKRSN+SAS TPVSKK+KLASAEK+D+
Sbjct: 181 SDEEMLGSDSDSDDEDDDIESEEETPKRKVESNKKRSNDSASVTPVSKKSKLASAEKSDA 240

Query: 241 KKGGHTATPHPAKKPAKTPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHG 293
           KKGGHTATPHPAKKP KTP KA TPKSGGQFSC SCDRSFGSDGALQSH KAKHG
Sbjct: 241 KKGGHTATPHPAKKPVKTPAKAATPKSGGQFSCKSCDRSFGSDGALQSHGKAKHG 295

[Close]

BLAST of PI0028442 vs. NCBI nr
Match: XP_008458624.1 (PREDICTED: histone deacetylase HDT1-like [Cucumis melo])

HSP 1 Score: 511.9 bits (1317), Expect = 3.6e-141
Identity = 279/295 (94.58%), Postives = 290/295 (98.31%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWGVEVKPGQALSVQPGD+NYVHLSQATLG+LKKDKAN+PVTIFLKIDDQKLVLGVLS
Sbjct: 1   MEFWGVEVKPGQALSVQPGDMNYVHLSQATLGDLKKDKANDPVTIFLKIDDQKLVLGVLS 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYSDSDFGSEDEELGML 120
           ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQE+YSDSDFGSEDEELG+L
Sbjct: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEEYSDSDFGSEDEELGLL 120

Query: 121 SAENGKPSEKEKSIGGKIFGLKPESSKKADAKSLEPSKVEDDDSEEDDSEDEDSD-DESD 180
           SAENGKPS+KEKSIGGKIFGLKPESSKKADAKS+EPSK EDDDSE+DDS DE SD DESD
Sbjct: 121 SAENGKPSDKEKSIGGKIFGLKPESSKKADAKSIEPSKEEDDDSEDDDSSDEGSDSDESD 180

Query: 181 EEMLEGDSDSDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVSKKAKLASAEKTDSKK 240
           EEMLEGDSDSDDED+GTDSEEETPKKVNESSKKRSNESASKTPVSKKAKLASAEKTDSKK
Sbjct: 181 EEMLEGDSDSDDEDEGTDSEEETPKKVNESSKKRSNESASKTPVSKKAKLASAEKTDSKK 240

Query: 241 GGHTATPHPAKKPAKTPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHGAK 295
           GGHTATPHPAKKPAK+PGKAETPKSGGQFSC +CDRSFGSDGALQSHSKAKHGAK
Sbjct: 241 GGHTATPHPAKKPAKSPGKAETPKSGGQFSCATCDRSFGSDGALQSHSKAKHGAK 295

[Close]

BLAST of PI0028442 vs. NCBI nr
Match: XP_004145781.1 (histone deacetylase HDT1 [Cucumis sativus])

HSP 1 Score: 506.5 bits (1303), Expect = 1.5e-139
Identity = 279/296 (94.26%), Postives = 286/296 (96.62%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWGVEVKPGQ LSVQPGD+NYVHLSQATLG+LKKDKANEPVTIFLKIDDQKLVLGVLS
Sbjct: 1   MEFWGVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLS 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYSDSDFGSEDEELGML 120
           ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQE++SDSDFGSEDEELGML
Sbjct: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEEFSDSDFGSEDEELGML 120

Query: 121 SAENGKPSEKEKSIGGKIFGLKPESSKKADAKSLEPSKVEDDDSEEDDSEDE--DSDDES 180
           SAENGK SEKEKSIGGKIFGLKPESSKKADAKS+ PSK EDDDSE+DDS DE  DSDD S
Sbjct: 121 SAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVS 180

Query: 181 DEEMLEGDSDSDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVSKKAKLASAEKTDSK 240
           DEEML GDSDSDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVSKK KLASAEKTDSK
Sbjct: 181 DEEMLGGDSDSDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSK 240

Query: 241 KGGHTATPHPAKKPAKTPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHGAK 295
           KGGHTATPHPAKKPAK+PGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHGAK
Sbjct: 241 KGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHGAK 296

[Close]

BLAST of PI0028442 vs. NCBI nr
Match: XP_038900401.1 (histone deacetylase HDT1-like [Benincasa hispida])

HSP 1 Score: 448.0 bits (1151), Expect = 6.4e-122
Identity = 251/295 (85.08%), Postives = 269/295 (91.19%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWGVEVKPGQALSV+PGD   VHLSQATLGELKKDKANEPVT+FLKI+DQKLVLG+LS
Sbjct: 1   MEFWGVEVKPGQALSVKPGDQMCVHLSQATLGELKKDKANEPVTVFLKINDQKLVLGILS 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYSDSDFGSEDEELGML 120
           A+KFPQI+FDLVFEK+FEL HNGK GSIYCLGYRAPM+DQ QEDYSDSDFGSEDEEL + 
Sbjct: 61  AEKFPQIAFDLVFEKDFELFHNGKSGSIYCLGYRAPMDDQEQEDYSDSDFGSEDEELALP 120

Query: 121 SAENGKPSEKEKSIGGKIFGLKPESSKKADAKSLEPSKVEDDDSEEDDS-EDEDSDDESD 180
            AENGKPS+KEKS+ GKIF LKPESSKKAD KSLEPSKV+ DDSE+DDS EDEDSDD+SD
Sbjct: 121 PAENGKPSQKEKSMAGKIFSLKPESSKKADVKSLEPSKVDGDDSEDDDSDEDEDSDDDSD 180

Query: 181 EEMLEGDSDSDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVSKKAKLASAEKTDSKK 240
           EEML  DS SD+EDDGTDS+EETPKKV +  KKR NESASKTPVSKKAKLASAEKT+SKK
Sbjct: 181 EEMLGSDSGSDNEDDGTDSDEETPKKV-QLDKKRPNESASKTPVSKKAKLASAEKTESKK 240

Query: 241 GGHTATPHPAKKPAKTPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHGAK 295
           GGHTATPHPAKK  KTPGKAETPKS GQFSC SCDRSFGSDGALQSHSKAKHG K
Sbjct: 241 GGHTATPHPAKKLVKTPGKAETPKSSGQFSCKSCDRSFGSDGALQSHSKAKHGGK 294

[Close]

BLAST of PI0028442 vs. NCBI nr
Match: KAA0033373.1 (histone deacetylase HDT1-like [Cucumis melo var. makuwa])

HSP 1 Score: 443.7 bits (1140), Expect = 1.2e-120
Identity = 259/303 (85.48%), Postives = 275/303 (90.76%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWGVEVKPGQALSVQPGD+NYVHLSQATLG+LKKDKAN+PVTIFLKIDDQKLVLGVLS
Sbjct: 1   MEFWGVEVKPGQALSVQPGDMNYVHLSQATLGDLKKDKANDPVTIFLKIDDQKLVLGVLS 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYS----DSDFGSEDEE 120
           ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQ  +      SDFGSEDEE
Sbjct: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQYPFQFENMYSDFGSEDEE 120

Query: 121 LGMLSAENGKPSEKEKSIGGKIFGLKPESSKKADAKSLEPSKVEDDDSEEDDSEDEDSD- 180
           LG+LSAENGKPS+KEKSIGGKIFGLKPESSKKADAKS+EPSK EDDDSE+DDS DE SD 
Sbjct: 121 LGLLSAENGKPSDKEKSIGGKIFGLKPESSKKADAKSIEPSKEEDDDSEDDDSSDEGSDS 180

Query: 181 DESDEEMLEGDS-DSDDEDDGTDSEEETPKKVNESSKKRSNESASKTP--VSKKAKLASA 240
           DESDEEMLEGDS DSD+EDD ++S+EETPKKV ES+KKR NESA+KT    +KKAKLA+ 
Sbjct: 181 DESDEEMLEGDSGDSDEEDDDSESDEETPKKV-ESAKKRLNESATKTTPLPAKKAKLATP 240

Query: 241 EKTDSKKGGHTATPHPAKKPAKTP-GKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKH 295
           EKTDSKKGGHTATPHPAKK  KTP  K ETPKSGGQFSC SCDRSF SDGALQSHSKAKH
Sbjct: 241 EKTDSKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFVSDGALQSHSKAKH 300

[Close]

BLAST of PI0028442 vs. NCBI nr
Match: XP_038900554.1 (histone deacetylase HDT1-like [Benincasa hispida])

HSP 1 Score: 430.3 bits (1105), Expect = 1.4e-116
Identity = 239/296 (80.74%), Postives = 265/296 (89.53%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWGVEVKPGQALSV+PGD  YVH+SQ T+GE+KKDK NEPVT+FLKI+DQK  LG+LS
Sbjct: 1   MEFWGVEVKPGQALSVKPGDQKYVHISQLTVGEVKKDK-NEPVTVFLKINDQKFPLGILS 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYSDSDFGSEDEELGML 120
           A+KFPQI FDLVFEKEFELSHNGK GSIYCLGYRA +EDQ QEDYSDS+FGSEDEEL + 
Sbjct: 61  AEKFPQIPFDLVFEKEFELSHNGKSGSIYCLGYRASIEDQEQEDYSDSEFGSEDEELALP 120

Query: 121 SAENGKPSEKEKSIGGKIFGLKPESSKKADAKSLEPSKVEDDDSEEDD--SEDEDSDDES 180
            AENGKPS+KEKS+ G +  +KPESSKKAD KS+EPSK ++D+SE+DD   +DEDSDDES
Sbjct: 121 PAENGKPSQKEKSVAGNVLSVKPESSKKADDKSVEPSKGDEDESEDDDDSDDDEDSDDES 180

Query: 181 DEEMLEGDSDSDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVSKKAKLASAEKTDSK 240
           DEEML  DS SDDEDD ++S+EETPKKVNES+KKRS ESASKTPVSKKAKLASAEKTDSK
Sbjct: 181 DEEMLGDDSGSDDEDDSSESDEETPKKVNESAKKRSIESASKTPVSKKAKLASAEKTDSK 240

Query: 241 KGGHTATPHPAKKPAKTPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHGAK 295
           KGGHTATPHPAKKP KTPGKAE+PKS GQFSC SCDRSFGSDGALQSHSKAKHG K
Sbjct: 241 KGGHTATPHPAKKPVKTPGKAESPKSVGQFSCKSCDRSFGSDGALQSHSKAKHGGK 295

[Close]

BLAST of PI0028442 vs. TAIR 10
Match: AT5G22650.2 (histone deacetylase 2B )

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-40
Identity = 128/282 (45.39%), Postives = 174/282 (61.70%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWGV V P  A  V P + + VH+SQA+L      K+ E V + + +   KLV+G LS
Sbjct: 1   MEFWGVAVTPKNATKVTPEEDSLVHISQASLD--CTVKSGESVVLSVTVGGAKLVIGTLS 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYSDSDFGSEDEELGML 120
            DKFPQISFDLVF+KEFELSH+G   +++ +GY++P  +Q        DF S D+E    
Sbjct: 61  QDKFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQ-------DDFTSSDDEDVPE 120

Query: 121 SAENGKPSEKEKSIGGKIFGLKPESSKKADAKSLEPSKVEDDDSEEDDSEDEDSDDESDE 180
           +     P+    +       +K ++  KA    ++P++ + +  EED+S+DED  +E D+
Sbjct: 121 AVPAPAPTAVTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDD 180

Query: 181 -----EMLEGDSDSDDEDDGTD-SEEETPKKVNESSKKRSNESASKTPVS-KKAKLASA- 240
                ++ E DSD D+E+D  D  EEETPKK    +KKR NES SKTPVS KKAK A+A 
Sbjct: 181 SEKGMDVDEDDSDDDEEEDSEDEEEEETPKKPEPINKKRPNESVSKTPVSGKKAKPAAAP 240

Query: 241 ----EKTDSKKGGHTATPHPAKKPAKTPGKA-ETPKSGGQFS 270
               +KT+ KKGGHTATPHPAKK  K+P  A ++PKSGGQ S
Sbjct: 241 ASTPQKTEKKKGGHTATPHPAKKGGKSPVNANQSPKSGGQSS 273

[Close]

BLAST of PI0028442 vs. TAIR 10
Match: AT5G03740.1 (histone deacetylase 2C )

HSP 1 Score: 163.3 bits (412), Expect = 2.9e-40
Identity = 129/305 (42.30%), Postives = 171/305 (56.07%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWGVEVK G+ L + PG    VH+SQ  LGE  K+   EP+ +++ +   KL++G LS
Sbjct: 1   MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGE-SKNNVTEPIQLYVTVGSDKLLIGTLS 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYSDSDFGSEDEELGML 120
            +KFPQ+S ++V E+ F LSH  K GS++  GY+    D   ED  D       E  G  
Sbjct: 61  HEKFPQLSTEIVLERNFALSHTWKNGSVFFSGYKVDASDPEPEDLIDDQL----EAAGFK 120

Query: 121 SAENGKPSEKEKSIGGKIFGLKPESSKKADAKSLEPSKVEDDDSEED-DSEDEDSDDESD 180
           +A    P    K +  ++     ++ +  DA   E    +DDDSE   D E+E    ESD
Sbjct: 121 AA----PKSAAKQVNFQLPNEDVKAKQDDDADGSEEDSSDDDDSENSGDEEEEKVTAESD 180

Query: 181 EEMLEGDSDSDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVS-KKAKLASAEKTDSK 240
            E  E DS  D+EDD   SEEETPKK  E  K+ +  ++SK P S KKAK  + +KTDSK
Sbjct: 181 SE--EDDSSDDEEDD--SSEEETPKKPEEPKKRSAEPNSSKNPASNKKAKFVTPQKTDSK 240

Query: 241 KGG-HTATPHPAKKPAKTPG---------KAETPKSGGQFSCTSCDRSFGSDGALQSHSK 294
           K   H ATPHP+K+  K  G         + +TPKS G F C SC R+F S+  LQSH+K
Sbjct: 241 KPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSCTRTFTSEMGLQSHTK 292

[Close]

BLAST of PI0028442 vs. TAIR 10
Match: AT5G22650.1 (histone deacetylase 2B )

HSP 1 Score: 159.8 bits (403), Expect = 3.2e-39
Identity = 128/283 (45.23%), Postives = 174/283 (61.48%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWGV V P  A  V P + + VH+SQA+L      K+ E V + + +   KLV+G LS
Sbjct: 1   MEFWGVAVTPKNATKVTPEEDSLVHISQASLD--CTVKSGESVVLSVTVGGAKLVIGTLS 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAPMEDQGQEDYSDSDFGSEDEELGML 120
            DKFPQISFDLVF+KEFELSH+G   +++ +GY++P  +Q        DF S D+E    
Sbjct: 61  QDKFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQ-------DDFTSSDDEDVPE 120

Query: 121 SAENGKPSEKEKSIGGKIFGLKPESSKKADAKSLEPSKVEDDDSEEDDSEDEDSDDESDE 180
           +     P+    +       +K ++  KA    ++P++ + +  EED+S+DED  +E D+
Sbjct: 121 AVPAPAPTAVTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDD 180

Query: 181 -----EMLEGDSDSDDEDDGTD-SEEETPKKVNESSKKRSNESASKTPVS-KKAKLASA- 240
                ++ E DSD D+E+D  D  EEETPKK    +KKR NES SKTPVS KKAK A+A 
Sbjct: 181 SEKGMDVDEDDSDDDEEEDSEDEEEEETPKKPEPINKKRPNESVSKTPVSGKKAKPAAAP 240

Query: 241 ----EKT-DSKKGGHTATPHPAKKPAKTPGKA-ETPKSGGQFS 270
               +KT + KKGGHTATPHPAKK  K+P  A ++PKSGGQ S
Sbjct: 241 ASTPQKTEEKKKGGHTATPHPAKKGGKSPVNANQSPKSGGQSS 274

[Close]

BLAST of PI0028442 vs. TAIR 10
Match: AT3G44750.1 (histone deacetylase 3 )

HSP 1 Score: 139.8 bits (351), Expect = 3.5e-33
Identity = 125/298 (41.95%), Postives = 167/298 (56.04%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWG+EVK G+ ++V P +   +H+SQA+LGE  K+K  E V + +K+ +Q LVLG LS
Sbjct: 1   MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGEC-KNKKGEFVPLHVKVGNQNLVLGTLS 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAP-MEDQGQEDYSDSDFGSEDEELGM 120
            +  PQ+  DLVF+KEFELSH    GS+Y +GY+ P +E QG          SE+EE   
Sbjct: 61  TENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNIEPQGY---------SEEEE--- 120

Query: 121 LSAENGKPSEKEKSIGGKIFGLKPESSKKADAKSLEPSKVEDDDSEEDDSEDEDSDDESD 180
                    E+E+ +     G   ++  K  AK  E     DD+ +E DS+  D D    
Sbjct: 121 ---------EEEEEVPA---GNAAKAVAKPKAKPAEVKPAVDDEEDESDSDGMDED---- 180

Query: 181 EEMLEGDSDSDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVS-KKAKLA-SAEKTDS 240
                   DSD ED  ++ EE TPKK   SSKKR+NE+  K PVS KKAK+A + +KTD 
Sbjct: 181 --------DSDGED--SEEEEPTPKK-PASSKKRANETTPKAPVSAKKAKVAVTPQKTDE 240

Query: 241 KKGGHTATPHPAKKPAKTPGKA--ETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHGA 294
           KK G               GKA  ++PKS  Q SC SC ++F S  AL+SH+KAKH A
Sbjct: 241 KKKG---------------GKAANQSPKSASQVSCGSCKKTFNSGNALESHNKAKHAA 243

[Close]

BLAST of PI0028442 vs. TAIR 10
Match: AT3G44750.2 (histone deacetylase 3 )

HSP 1 Score: 137.5 bits (345), Expect = 1.7e-32
Identity = 126/298 (42.28%), Postives = 164/298 (55.03%), Query Frame = 0


Query: 1   MEFWGVEVKPGQALSVQPGDLNYVHLSQATLGELKKDKANEPVTIFLKIDDQKLVLGVLS 60
           MEFWG+EVK G+ ++V P +   +H+SQA+LGE  K+K  E V + +K+ +Q LVLG LS
Sbjct: 1   MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGEC-KNKKGEFVPLHVKVGNQNLVLGTLS 60

Query: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIYCLGYRAP-MEDQGQEDYSDSDFGSEDEELGM 120
            +  PQ+  DLVF+KEFELSH    GS+Y +GY+ P +E QG          SE+EE  +
Sbjct: 61  TENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNIEPQGY---------SEEEEEEV 120

Query: 121 LSAENGKPSEKEKSIGGKIFGLKPESSKKADAKSLEPSKVEDDDSEEDDSEDEDSDDESD 180
            +    K   K K+        KP   K A                 DD EDE   D  D
Sbjct: 121 PAGNAAKAVAKPKA--------KPAEVKPA----------------VDDEEDESDSDGMD 180

Query: 181 EEMLEGDSDSDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVS-KKAKLA-SAEKTDS 240
           E+      DSD ED  ++ EE TPKK   SSKKR+NE+  K PVS KKAK+A + +KTD 
Sbjct: 181 ED------DSDGED--SEEEEPTPKK-PASSKKRANETTPKAPVSAKKAKVAVTPQKTDE 240

Query: 241 KKGGHTATPHPAKKPAKTPGKA--ETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHGA 294
           KK G               GKA  ++PKS  Q SC SC ++F S  AL+SH+KAKH A
Sbjct: 241 KKKG---------------GKAANQSPKSASQVSCGSCKKTFNSGNALESHNKAKHAA 240

The following BLAST results are available for this feature:

BLAST of PI0028442 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6V9I6	5.7e-57	52.03	Histone deacetylase HDT1 OS=Solanum chacoense OX=4108 GN=HDT1 PE=2 SV=1	[more]
Q8LJS2	7.5e-57	49.50	Histone deacetylase HDT1 OS=Glycine max OX=3847 GN=HDT1 PE=2 SV=1	[more]
Q9M4U5	2.9e-48	48.40	Histone deacetylase HDT2 OS=Zea mays OX=4577 GN=HDT2 PE=1 SV=1	[more]
O24591	1.3e-45	47.78	Histone deacetylase HDT1 OS=Zea mays OX=4577 GN=HDT1 PE=1 SV=1	[more]
Q9M4U4	6.6e-45	47.95	Histone deacetylase HDT3 OS=Zea mays OX=4577 GN=HDT3 PE=2 SV=1	[more]

BLAST of PI0028442 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C9I3	1.7e-141	94.58	histone deacetylase HDT1-like OS=Cucumis melo OX=3656 GN=LOC103497974 PE=3 SV=1	[more]
A0A0A0KGM8	7.3e-140	94.26	Histone deacetylase 2a OS=Cucumis sativus OX=3659 GN=Csa_6G150550 PE=3 SV=1	[more]
A0A5A7SSE8	5.9e-121	85.48	Histone deacetylase HDT1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A6J1CG52	9.7e-116	81.14	histone deacetylase HDT1-like OS=Momordica charantia OX=3673 GN=LOC111011215 PE=...	[more]
A0A6J1H533	3.2e-111	79.66	histone deacetylase HDT1-like OS=Cucurbita moschata OX=3662 GN=LOC111459656 PE=3...	[more]

BLAST of PI0028442 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458624.1	3.6e-141	94.58	PREDICTED: histone deacetylase HDT1-like [Cucumis melo]	[more]
XP_004145781.1	1.5e-139	94.26	histone deacetylase HDT1 [Cucumis sativus]	[more]
XP_038900401.1	6.4e-122	85.08	histone deacetylase HDT1-like [Benincasa hispida]	[more]
KAA0033373.1	1.2e-120	85.48	histone deacetylase HDT1-like [Cucumis melo var. makuwa]	[more]
XP_038900554.1	1.4e-116	80.74	histone deacetylase HDT1-like [Benincasa hispida]	[more]

BLAST of PI0028442 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22650.2	1.3e-40	45.39	histone deacetylase 2B	[more]
AT5G03740.1	2.9e-40	42.30	histone deacetylase 2C	[more]
AT5G22650.1	3.2e-39	45.23	histone deacetylase 2B	[more]
AT3G44750.1	3.5e-33	41.95	histone deacetylase 3	[more]
AT3G44750.2	1.7e-32	42.28	histone deacetylase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.120.340	Nucleoplasmin core domain	coord: 1..101 e-value: 2.9E-16 score: 61.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..283
None	No IPR available	PANTHER	PTHR31802	32 KDA HEAT SHOCK PROTEIN-RELATED	coord: 1..290
None	No IPR available	PANTHER	PTHR31802:SF12	HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1	coord: 1..290
IPR041232	Nucleoplasmin-like domain	PFAM	PF17800	NPL	coord: 3..93 e-value: 3.1E-10 score: 40.7
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 270..291
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 268..294 score: 10.92807

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028442.1	PI0028442.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0010162	seed dormancy process
cellular_component	GO:0005730	nucleolus