PI0028342 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACCGTAGTTGGTGTTAGGTCAACTTGACAAGGAAGAACAAAATCATTGCACCGTAATTGGGTAAAATGGTGTACTATTGATTGTTGCAGTGGCCATCTCGAATCCTGTAAATCGTAAAAACCCTCTCTTTTCTTCACGCGCACACTCTCCGGAGGTACTAGAATACTGATTTTTTTACTCTTTCAAGTTGCAGAAGAAAACATAGCCACAATTACAAACAACCCTTATTCTTCTTCTTCTTCTTCTTCAACCTCTTTCCCGTTTTCTCTCTCGACTTCCCTTTACCCCATGCTGTTTAGCTAGTTCATCGTCCTATTGGGATTTTGGGGGGAGAACTTTTGTCTTTTCAACTTGAATTTTGCCGCTTTTGTCTATAAATGGCCGATGTTTTTAGGTTCTCGTCGCATTCTTTCTATTTCTCCTCCACTTCTTTGCCACCCTCCTTTGCCTCGTCATACAGTTCCCTTCACCCATCTCTTCCATCCATTCAAACCCAGAAAAGAGGTCGAGTCCTATGCCATGTTATTCCACTAGCTATGTAATGCCTCTTTCTTTCAGACCCAGAAAGAGGTTGGTATCTTTCAAGGTACATAACTTGTCTTGTGGTTGGATTTCTATTGTATGATTGTTAGTTCTTGAGATTTTTGTTGGATATCGAGTAAATTTGTGGCAATTGTTTAGTAATAATGTGTTCGATGGCAATTAACAGTAGTTTTTATATAGGAATTTAGTCATGTTAGTATACCTACCCCCAACAATTTGGGCTTTCGTGTTTGCCGGATGATGCTAGAAAGTATTTGTTTGTTGGGGTTGTCTGAATTTGATTTTTAATTTGAAGTTTCTTTTGCCAAAATGCTATTCAGACAGATTCTATGGAACCCTAGTGAGGTCCATGGACAAAGATGGATTCTTTTTATGCCTTATCCGGAAAGGAAGTAAGGCTGACAGTATTGCCATGGCAATGGAGCCAGCTGCTTGTATGGACTAATTGAACCGTTTATGTTTTCGTGGTTGTTGGTGCTTGTACTTTTATCAGTTAAAAGAATTTGCTTACATTGCTTTATCAACAATTCTTTCCCACGTGCTTTCAATTCTCAGTTGACAGTTGTAGACCGTTCTACCTAGCTGTTTTATGTTTCAGCGTAGCCTGATACTGGTTAACTCTAAAAGAAGCCATGTTTCTATTTTATGGTTGGTTAAACCAAAAGGAGCTATGTATTTTCTTCATCTTTGTTTGAAGTTCCTTCAGAACTGGTGATGGCTATTGGTAAGATGTTTGGTTATGAATGAGTTAACGAAGGGAGAAATTCCTTGTTATTTGGGGAATTGTTGATTCTCCTACAGAAGGCCTGGGGGCTGGTAAGATTTGAAATCAAAATATGGCTCTGAGACTTGAAATTTAGGGAACCATTGTTAAATTGGATTTTGCTTCCTTTTTTTCTATTTTTTTTGGATTGTCAACGGGACAACTTGTAATTTCACATTGGCTTTCTGAGGGTAGGAGGATGTATTATGTGGCCCTCTTATTCTTTTATACACAATTATTTGTTTAAAAATATTGTTTAAATAAGTCAATTGTTTTCTCAGCGACTCCTGTTAATTGTTCTCTGATGCAACAGGTACAGGCTGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAATGCACCAAACATGATTGATATACATTCGACACAGGAATTTTTGACTGCATTAAGTGAAGCTGGTGATAGATTAGTTATTGTAGAATTTTACGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGGTAACGTTTTTCATCAATGCTTTATATTCATTGTATTGTAAAGTTGACCTGTTGTTTGCATTTTTCATTTCGATAAGCAAGACATGCTACAGCATTTTCTAAGCCTCAATGTAGGACCAGCTTATTTAAGTAGGCATTAAATAAATTTGTGTCTTCAGAGACAACGACTGCTGCATTTGTTGGTTATCAAGATAAAAAGCTTTAAAATACACTTTGCAGTACTTAAGGTTTTGAACCTATCTATTTTAATGAGGTTGAAACTTGAAACCACGGACGATTGCTCAATCCTCCAAAATTTTGTTAATCAAGAACTCTTGTCCCTTGGGGAACATGCGATAGAATTAGAGCTATTAAATATTTCATGTCCCAAGTAGCTGGTCTCAAATAGCCTCGATGGATGATCCTTGATCCCCTTGTTTGAACCTCATGGATGATCCTATGAATTTCAAATATATCCAAGATAGAGGCATAGTATTTTGGAAAAGTTAAGTACTCTGATTAAGGAGGCATGCTTTGTTTTTATTCTTTCCTTTATTGGTTTACTGCTGGAGCAGCAGGTCTGTCATTATCCGTCGCTGAGGTTATAATGAGAAAACTCCAGAACACTTCTTATTTACACGTTTGTTTCTTGTGAATGCTGCTCTCATCAAAGAATTGATATTCATTGGATAGGATATTTTCCGTCTCTTATAAAGAAAATGCATCTTGCTGCGAAACCTAAGCTTGACTCTATCGTAACGTTTACTTTTCTGTTTTATGTTCTGATGTGTTTTATACATGTTGAAATGGAACTGTCAGCTCTGCAGAACAGCTGATGAACACCCTGAGATTTTATTCCTAAAAGTCAATTTTGACGAAAACAAGCCAATGTGCAAAAGCTTGAATGTCAAGGTCCTTCCTTATTTTCACTTTTATCGTGGAGCTGACGGGCAGTTGGAGTCCTTCTCATGCTCACTCGCAAAGGTTAGCATCCTCGTTCCCCTTCCCACCTCCAATGTGCCAATTCATTCTATTTTATGGTTAACTTATAATGAGTAGAATGTATTTGAGATATAAATAACTTTTCAAGTCAATTCACTCTACTTCATTGGTTAGCTTATAATGAGAAGAATTGATTTAGAAATCTGAAGAACTTTTCGAGTCAGAGGGCACATACAATAAGAAAGATTGATGAGGATCTCTAATATGGACAGAAAACTTCCCTTATCCTCATATTTGAATAAATGTATCAAGTTATTGATCTTAGGACATGCAGTGATAAATTTTCTAAAGCATTCTCATGAAATGATCAATATAAGTAAACATTTTCTAAATTTTAACTCTACCTAACCTTTCTTCATTCCACAGTTTCAGAAAATTAAAGATGCAATTGAGATGCACAACACAGCTCGTTGCAGCATTGGGCCGCCAAAGGGAGTAGGCGATCTTATACTGGAGCCTTCCTTGGCTCCTAAAGACAAACAATAAACAGAAGCTTCATCATAGACTTGCCCAAATCCGCATCGGTATCATTGTGCATTCCCCTGATATTAGTATAACCTTCTTGTTTTTTTTTTTAAGTCAGCTATCCAATCTGTAAATTGTCATTCTTGTTCTGTAAAAGAATTCAGAAGTTGAGAATACCAATCATAAATTATTTTGTTGCCTTTATCTGCTTTCTTGTGCTAGCTTTTATTTTTGTACTTTGAAACTAGTTATATTGGATCAAAATACATGCCATTGATTCATTGGTTTCATTTGTCTAATCT CACCGTAGTTGGTGTTAGGTCAACTTGACAAGGAAGAACAAAATCATTGCACCGTAATTGGGTAAAATGGTGTACTATTGATTGTTGCAGTGGCCATCTCGAATCCTGTAAATCGTAAAAACCCTCTCTTTTCTTCACGCGCACACTCTCCGGAGGTACTAGAATACTGATTTTTTTACTCTTTCAAGTTGCAGAAGAAAACATAGCCACAATTACAAACAACCCTTATTCTTCTTCTTCTTCTTCTTCAACCTCTTTCCCGTTTTCTCTCTCGACTTCCCTTTACCCCATGCTGTTTAGCTAGTTCATCGTCCTATTGGGATTTTGGGGGGAGAACTTTTGTCTTTTCAACTTGAATTTTGCCGCTTTTGTCTATAAATGGCCGATGTTTTTAGGTTCTCGTCGCATTCTTTCTATTTCTCCTCCACTTCTTTGCCACCCTCCTTTGCCTCGTCATACAGTTCCCTTCACCCATCTCTTCCATCCATTCAAACCCAGAAAAGAGGTCGAGTCCTATGCCATGTTATTCCACTAGCTATGTAATGCCTCTTTCTTTCAGACCCAGAAAGAGGTTGGTATCTTTCAAGGTACAGGCTGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAATGCACCAAACATGATTGATATACATTCGACACAGGAATTTTTGACTGCATTAAGTGAAGCTGGTGATAGATTAGTTATTGTAGAATTTTACGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGCTCTGCAGAACAGCTGATGAACACCCTGAGATTTTATTCCTAAAAGTCAATTTTGACGAAAACAAGCCAATGTGCAAAAGCTTGAATGTCAAGGTCCTTCCTTATTTTCACTTTTATCGTGGAGCTGACGGGCAGTTGGAGTCCTTCTCATGCTCACTCGCAAAGTTTCAGAAAATTAAAGATGCAATTGAGATGCACAACACAGCTCGTTGCAGCATTGGGCCGCCAAAGGGAGTAGGCGATCTTATACTGGAGCCTTCCTTGGCTCCTAAAGACAAACAATAAACAGAAGCTTCATCATAGACTTGCCCAAATCCGCATCGGTATCATTGTGCATTCCCCTGATATTAGTATAACCTTCTTGTTTTTTTTTTTAAGTCAGCTATCCAATCTGTAAATTGTCATTCTTGTTCTGTAAAAGAATTCAGAAGTTGAGAATACCAATCATAAATTATTTTGTTGCCTTTATCTGCTTTCTTGTGCTAGCTTTTATTTTTGTACTTTGAAACTAGTTATATTGGATCAAAATACATGCCATTGATTCATTGGTTTCATTTGTCTAATCT ATGCCATGTTATTCCACTAGCTATGTAATGCCTCTTTCTTTCAGACCCAGAAAGAGGTTGGTATCTTTCAAGGTACAGGCTGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAATGCACCAAACATGATTGATATACATTCGACACAGGAATTTTTGACTGCATTAAGTGAAGCTGGTGATAGATTAGTTATTGTAGAATTTTACGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGCTCTGCAGAACAGCTGATGAACACCCTGAGATTTTATTCCTAAAAGTCAATTTTGACGAAAACAAGCCAATGTGCAAAAGCTTGAATGTCAAGGTCCTTCCTTATTTTCACTTTTATCGTGGAGCTGACGGGCAGTTGGAGTCCTTCTCATGCTCACTCGCAAAGTTTCAGAAAATTAAAGATGCAATTGAGATGCACAACACAGCTCGTTGCAGCATTGGGCCGCCAAAGGGAGTAGGCGATCTTATACTGGAGCCTTCCTTGGCTCCTAAAGACAAACAATAA MPCYSTSYVMPLSFRPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAPKDKQ Homology
BLAST of PI0028342 vs. ExPASy Swiss-Prot
Match: Q5TKD8 (Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0200100 PE=2 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 4.2e-71 Identity = 129/163 (79.14%), Postives = 141/163 (86.50%), Query Frame = 0
BLAST of PI0028342 vs. ExPASy Swiss-Prot
Match: Q8LEK4 (Thioredoxin-like 2-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g26160 PE=1 SV=2) HSP 1 Score: 233.0 bits (593), Expect = 2.6e-60 Identity = 107/153 (69.93%), Postives = 126/153 (82.35%), Query Frame = 0
BLAST of PI0028342 vs. ExPASy Swiss-Prot
Match: Q8LCT3 (Thioredoxin-like 2-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g29670 PE=2 SV=2) HSP 1 Score: 227.6 bits (579), Expect = 1.1e-58 Identity = 101/128 (78.91%), Postives = 117/128 (91.41%), Query Frame = 0
BLAST of PI0028342 vs. ExPASy Swiss-Prot
Match: Q10M18 (Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0326500 PE=2 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 8.6e-40 Identity = 79/171 (46.20%), Postives = 112/171 (65.50%), Query Frame = 0
BLAST of PI0028342 vs. ExPASy Swiss-Prot
Match: O22779 (Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g33270 PE=2 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 1.5e-36 Identity = 68/162 (41.98%), Postives = 110/162 (67.90%), Query Frame = 0
BLAST of PI0028342 vs. ExPASy TrEMBL
Match: A0A1S3AV76 (thioredoxin-like 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483190 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 9.1e-101 Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 0
BLAST of PI0028342 vs. ExPASy TrEMBL
Match: A0A0A0L760 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G119600 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 1.2e-100 Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0
BLAST of PI0028342 vs. ExPASy TrEMBL
Match: A0A6J1D0D2 (thioredoxin-like 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111016419 PE=4 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 4.4e-95 Identity = 169/179 (94.41%), Postives = 173/179 (96.65%), Query Frame = 0
BLAST of PI0028342 vs. ExPASy TrEMBL
Match: A0A6J1FDV9 (thioredoxin-like 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111444639 PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 7.4e-95 Identity = 166/178 (93.26%), Postives = 175/178 (98.31%), Query Frame = 0
BLAST of PI0028342 vs. ExPASy TrEMBL
Match: A0A6J1ID41 (thioredoxin-like 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111474796 PE=4 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93 Identity = 164/178 (92.13%), Postives = 173/178 (97.19%), Query Frame = 0
BLAST of PI0028342 vs. NCBI nr
Match: XP_008437900.1 (PREDICTED: thioredoxin-like 2, chloroplastic [Cucumis melo]) HSP 1 Score: 375.9 bits (964), Expect = 1.9e-100 Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 0
BLAST of PI0028342 vs. NCBI nr
Match: XP_004133814.1 (thioredoxin-like 2, chloroplastic [Cucumis sativus] >KGN56427.1 hypothetical protein Csa_010811 [Cucumis sativus]) HSP 1 Score: 375.6 bits (963), Expect = 2.4e-100 Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0
BLAST of PI0028342 vs. NCBI nr
Match: XP_038877589.1 (thioredoxin-like 2, chloroplastic [Benincasa hispida]) HSP 1 Score: 375.2 bits (962), Expect = 3.2e-100 Identity = 176/178 (98.88%), Postives = 178/178 (100.00%), Query Frame = 0
BLAST of PI0028342 vs. NCBI nr
Match: XP_022147515.1 (thioredoxin-like 2, chloroplastic [Momordica charantia]) HSP 1 Score: 357.1 bits (915), Expect = 9.0e-95 Identity = 169/179 (94.41%), Postives = 173/179 (96.65%), Query Frame = 0
BLAST of PI0028342 vs. NCBI nr
Match: XP_022938368.1 (thioredoxin-like 2, chloroplastic [Cucurbita moschata] >XP_022938377.1 thioredoxin-like 2, chloroplastic [Cucurbita moschata]) HSP 1 Score: 356.3 bits (913), Expect = 1.5e-94 Identity = 166/178 (93.26%), Postives = 175/178 (98.31%), Query Frame = 0
BLAST of PI0028342 vs. TAIR 10
Match: AT4G29670.1 (atypical CYS HIS rich thioredoxin 2 ) HSP 1 Score: 263.5 bits (672), Expect = 1.3e-70 Identity = 117/147 (79.59%), Postives = 135/147 (91.84%), Query Frame = 0
BLAST of PI0028342 vs. TAIR 10
Match: AT4G26160.1 (atypical CYS HIS rich thioredoxin 1 ) HSP 1 Score: 233.0 bits (593), Expect = 1.8e-61 Identity = 107/153 (69.93%), Postives = 126/153 (82.35%), Query Frame = 0
BLAST of PI0028342 vs. TAIR 10
Match: AT4G29670.2 (atypical CYS HIS rich thioredoxin 2 ) HSP 1 Score: 227.6 bits (579), Expect = 7.7e-60 Identity = 101/128 (78.91%), Postives = 117/128 (91.41%), Query Frame = 0
BLAST of PI0028342 vs. TAIR 10
Match: AT2G33270.1 (atypical CYS HIS rich thioredoxin 3 ) HSP 1 Score: 154.1 bits (388), Expect = 1.1e-37 Identity = 68/162 (41.98%), Postives = 110/162 (67.90%), Query Frame = 0
BLAST of PI0028342 vs. TAIR 10
Match: AT1G08570.1 (atypical CYS HIS rich thioredoxin 4 ) HSP 1 Score: 149.4 bits (376), Expect = 2.7e-36 Identity = 66/142 (46.48%), Postives = 98/142 (69.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|