PI0028238 (gene) Melon (PI 482460) v1

Overview


Name	PI0028238
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DUF4408 domain-containing protein
Location	chr11: 27586521 .. 27587647 (+)
RNA-Seq Expression	PI0028238
Synteny	PI0028238

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAATTGAAAAAAAAAAAAAAAAAGAACTTGAAGAAAAAAAAGCGAAGATTAAGATTACTCTGTTTTTTCTTGTTGATTTTTCTCTCTGTTTCCATGATTCCGATTAAGAATTTCTTTGTAGCACCGTCGTATTTTCTTCCACCGGAGATGATCTTCACGGTTGAATCGAAAAATTTGAAGAAGGAGTTTGTTTATCAGTGACTTTGATTTGAATTTTGTGATTTTTTTTTTTTGTTTTGTTTTCTTTCTTGGAAATGGAGTCCGTGAATTTCTACGACATAAGAACAGAGAAAGCGAACGCGATTCTTAAGTATCGACAGTTTAGGAAAATCGCTAATCTGTTTCGATTCATCGAATTGTGTTTGATTCTCATCGTGATCTCGAGATTTTCCAGTCATTTGCCGACTGCTTTGAAAAACTCCACCGAGTATTTCCGATGCTTGTCCGTGACATTAATCAGTCCTCGTTTTGTGTTTTTGATCGGAAACGCTATAGTCATCACTCTTTTCGCTAAATCTGGACAGTTCTCTGCTAAGGATCCGAGCAAGAAGAATTTAGTTGCCGATCTTTACGAGGAGTTCATCAAAAACAGCGAGAAGAATCAGAAATCTCCACGCACTGAAATCAATTATCGAATCAAGCATATCGATGAAAGCCGCGGCAACGCCTCGATATCTGTCGAGAAAATCGTGAAACCTGAAGAAATAAAGCGATATCAGAGGAGTAAATCGGAGAAAATGGAGGTTGTACCGCGAGAGAAGGCGGATCGTGAAATGCGGCGATCGGAGACAGAGAAATGTAAGAAAATCGTGGAATTGAAGGAAGGAAGAAGAAATAGCTCGTATCCGGAAGATGGAATGAGTAACGAAGAGTTCCGGCAGACGGTGGAGGCGTTCATAGCGCGGCAGCAGAGGTTGCAAAGGGAGGAAGAATTCAGTGAATTTTAGGAATTATATGTAAATGAAAGGTTTAAGTTCTCGTAAATCCGGCAAGAAATTAGGACTACGGGTTGAAGAAGATGAAACTGGGAAAAAAGTTGTAATAACTTTATGTATACAGTTTTATTTTTTTAAAATATATTTGGATGAAAATTATATAAAACACATTCAAAGCACTTTTTACTTA

mRNA sequence

CTCAATTGAAAAAAAAAAAAAAAAAGAACTTGAAGAAAAAAAAGCGAAGATTAAGATTACTCTGTTTTTTCTTGTTGATTTTTCTCTCTGTTTCCATGATTCCGATTAAGAATTTCTTTGTAGCACCGTCGTATTTTCTTCCACCGGAGATGATCTTCACGGTTGAATCGAAAAATTTGAAGAAGGAGTTTGTTTATCAGTGACTTTGATTTGAATTTTGTGATTTTTTTTTTTTGTTTTGTTTTCTTTCTTGGAAATGGAGTCCGTGAATTTCTACGACATAAGAACAGAGAAAGCGAACGCGATTCTTAAGTATCGACAGTTTAGGAAAATCGCTAATCTGTTTCGATTCATCGAATTGTGTTTGATTCTCATCGTGATCTCGAGATTTTCCAGTCATTTGCCGACTGCTTTGAAAAACTCCACCGAGTATTTCCGATGCTTGTCCGTGACATTAATCAGTCCTCGTTTTGTGTTTTTGATCGGAAACGCTATAGTCATCACTCTTTTCGCTAAATCTGGACAGTTCTCTGCTAAGGATCCGAGCAAGAAGAATTTAGTTGCCGATCTTTACGAGGAGTTCATCAAAAACAGCGAGAAGAATCAGAAATCTCCACGCACTGAAATCAATTATCGAATCAAGCATATCGATGAAAGCCGCGGCAACGCCTCGATATCTGTCGAGAAAATCGTGAAACCTGAAGAAATAAAGCGATATCAGAGGAGTAAATCGGAGAAAATGGAGGTTGTACCGCGAGAGAAGGCGGATCGTGAAATGCGGCGATCGGAGACAGAGAAATGTAAGAAAATCGTGGAATTGAAGGAAGGAAGAAGAAATAGCTCGTATCCGGAAGATGGAATGAGTAACGAAGAGTTCCGGCAGACGGTGGAGGCGTTCATAGCGCGGCAGCAGAGGTTGCAAAGGGAGGAAGAATTCAGTGAATTTTAGGAATTATATGTAAATGAAAGGTTTAAGTTCTCGTAAATCCGGCAAGAAATTAGGACTACGGGTTGAAGAAGATGAAACTGGGAAAAAAGTTGTAATAACTTTATGTATACAGTTTTATTTTTTTAAAATATATTTGGATGAAAATTATATAAAACACATTCAAAGCACTTTTTACTTA

Coding sequence (CDS)

ATGGAGTCCGTGAATTTCTACGACATAAGAACAGAGAAAGCGAACGCGATTCTTAAGTATCGACAGTTTAGGAAAATCGCTAATCTGTTTCGATTCATCGAATTGTGTTTGATTCTCATCGTGATCTCGAGATTTTCCAGTCATTTGCCGACTGCTTTGAAAAACTCCACCGAGTATTTCCGATGCTTGTCCGTGACATTAATCAGTCCTCGTTTTGTGTTTTTGATCGGAAACGCTATAGTCATCACTCTTTTCGCTAAATCTGGACAGTTCTCTGCTAAGGATCCGAGCAAGAAGAATTTAGTTGCCGATCTTTACGAGGAGTTCATCAAAAACAGCGAGAAGAATCAGAAATCTCCACGCACTGAAATCAATTATCGAATCAAGCATATCGATGAAAGCCGCGGCAACGCCTCGATATCTGTCGAGAAAATCGTGAAACCTGAAGAAATAAAGCGATATCAGAGGAGTAAATCGGAGAAAATGGAGGTTGTACCGCGAGAGAAGGCGGATCGTGAAATGCGGCGATCGGAGACAGAGAAATGTAAGAAAATCGTGGAATTGAAGGAAGGAAGAAGAAATAGCTCGTATCCGGAAGATGGAATGAGTAACGAAGAGTTCCGGCAGACGGTGGAGGCGTTCATAGCGCGGCAGCAGAGGTTGCAAAGGGAGGAAGAATTCAGTGAATTTTAG

Protein sequence

MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYFRCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNQKSPRTEINYRIKHIDESRGNASISVEKIVKPEEIKRYQRSKSEKMEVVPREKADREMRRSETEKCKKIVELKEGRRNSSYPEDGMSNEEFRQTVEAFIARQQRLQREEEFSEF

Homology

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BLAST of PI0028238 vs. ExPASy TrEMBL
Match: A0A5D3DZ88 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00270 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.5e-103
Identity = 215/233 (92.27%), Postives = 221/233 (94.85%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKN TEYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNFTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEK-NQKS 120
           R LSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEK NQKS
Sbjct: 61  RYLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNNQKS 120

Query: 121 PRTEINYRIKHIDESRGNASISVEKIV-KPEEIKRYQRSKSEKMEVVPREKADRE-MRRS 180
           PRTEINY+IKHIDESRG AS+SVEK+V  PEE KRYQR KSEKMEVV REK DRE ++RS
Sbjct: 121 PRTEINYQIKHIDESRGKASVSVEKVVNNPEETKRYQRCKSEKMEVVLREKVDRELLQRS 180

Query: 181 ETEKCKKIVELKEGRRNSSYPEDGMSNEEFRQTVEAFIARQQRLQREEEFSEF 231
           ETEKCKK+VELKEGRRNSSYPED MSNEEFRQTVEAFIARQQRLQREEEFSEF
Sbjct: 181 ETEKCKKMVELKEGRRNSSYPEDVMSNEEFRQTVEAFIARQQRLQREEEFSEF 233

[Close]

BLAST of PI0028238 vs. ExPASy TrEMBL
Match: A0A1S3CDN2 (uncharacterized protein LOC103499689 OS=Cucumis melo OX=3656 GN=LOC103499689 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.5e-103
Identity = 215/233 (92.27%), Postives = 221/233 (94.85%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKN TEYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNFTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEK-NQKS 120
           R LSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEK NQKS
Sbjct: 61  RYLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNNQKS 120

Query: 121 PRTEINYRIKHIDESRGNASISVEKIV-KPEEIKRYQRSKSEKMEVVPREKADRE-MRRS 180
           PRTEINY+IKHIDESRG AS+SVEK+V  PEE KRYQR KSEKMEVV REK DRE ++RS
Sbjct: 121 PRTEINYQIKHIDESRGKASVSVEKVVNNPEETKRYQRCKSEKMEVVLREKVDRELLQRS 180

Query: 181 ETEKCKKIVELKEGRRNSSYPEDGMSNEEFRQTVEAFIARQQRLQREEEFSEF 231
           ETEKCKK+VELKEGRRNSSYPED MSNEEFRQTVEAFIARQQRLQREEEFSEF
Sbjct: 181 ETEKCKKMVELKEGRRNSSYPEDVMSNEEFRQTVEAFIARQQRLQREEEFSEF 233

[Close]

BLAST of PI0028238 vs. ExPASy TrEMBL
Match: A0A0A0LIS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G248720 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.3e-101
Identity = 211/232 (90.95%), Postives = 218/232 (93.97%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEK-NQKS 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKK+LVADLYEEFIKNSEK NQKS
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120

Query: 121 PRTEINYRIKHIDESRGNASISVEKIV-KPEEIKRYQRSKSEKMEVVPREKADREMRRSE 180
           PRTE    IKHIDESR  ASISVEKIV  P+E +RY+RSKSE+MEVVPREK DREM+RSE
Sbjct: 121 PRTE----IKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSE 180

Query: 181 TEKCKKIVELKEGRRNSSYPEDGMSNEEFRQTVEAFIARQQRLQREEEFSEF 231
           TEKCKK+VELKEGRRN SY EDGMSNEEFRQTVEAFIARQQRLQREEE SEF
Sbjct: 181 TEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 228

[Close]

BLAST of PI0028238 vs. ExPASy TrEMBL
Match: A0A6J1CYN5 (uncharacterized protein LOC111015401 OS=Momordica charantia OX=3673 GN=LOC111015401 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.6e-86
Identity = 178/230 (77.39%), Postives = 198/230 (86.09%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIR EKANAILK+RQ RKIANLFRFIELCL+L++ISRFSSHLP+A+KNS EYF
Sbjct: 1   MESVNFYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNQKSP 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKN VADLYE+FIKNSEKNQK+ 
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTR 120

Query: 121 RTEINYRIKHIDESRGNASISVEKIVKPEEIKRYQRSKSEKMEVVPREKADREMRRSETE 180
             EI YR K ID   G+AS++ +K+V PEEIK Y+RS+SEK+ V  +E   RE+RRSETE
Sbjct: 121 HAEIEYRTKQID-GDGDASVAAKKVVNPEEIKLYRRSQSEKIAVAQQENPQRELRRSETE 180

Query: 181 KCKKIVELKEGRRNSSYPEDGMSNEEFRQTVEAFIARQQRLQREEEFSEF 231
           KCKK+V   EG   SSYPED MSNEEFRQTVEAFIARQQRL+REEE   F
Sbjct: 181 KCKKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEHCVF 229

[Close]

BLAST of PI0028238 vs. ExPASy TrEMBL
Match: A0A6J1JGH7 (uncharacterized protein LOC111484294 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484294 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.3e-83
Identity = 180/236 (76.27%), Postives = 198/236 (83.90%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYD+R  K NAILKYRQ RKIANLFRFIELCLIL+V++RFSS+LP+A KNS EYF
Sbjct: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVMTRFSSNLPSAFKNSGEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNQKSP 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKN VADLYEEF++NSEKNQK+ 
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKNQKTR 120

Query: 121 RTEINYRIKHIDESRGN------ASISVEKIVKPEEIKRYQRSKSEKMEVVPREKADREM 180
           R EI YR+K ID+SRGN       SI+++KI    EIK YQRS+SEK+ VV RE   RE+
Sbjct: 121 RAEIEYRVKQIDDSRGNGNGNSDTSIAIKKI---GEIKHYQRSESEKIGVVQRENPHREL 180

Query: 181 RRSETEKCKKIVELKEGRRNSSYPEDGMSNEEFRQTVEAFIARQQRLQREEEFSEF 231
           RRSETEK KKIV L E  RN S PED MSNEEFRQTVEAFIARQQRL+REEEF  F
Sbjct: 181 RRSETEKYKKIVRLSEETRNRSSPEDRMSNEEFRQTVEAFIARQQRLRREEEFCVF 233

[Close]

BLAST of PI0028238 vs. NCBI nr
Match: XP_008460958.1 (PREDICTED: uncharacterized protein LOC103499689 [Cucumis melo] >KAA0045570.1 uncharacterized protein E6C27_scaffold243G00730 [Cucumis melo var. makuwa] >TYK28824.1 uncharacterized protein E5676_scaffold303G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 385.6 bits (989), Expect = 3.1e-103
Identity = 215/233 (92.27%), Postives = 221/233 (94.85%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKN TEYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNFTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEK-NQKS 120
           R LSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEK NQKS
Sbjct: 61  RYLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNNQKS 120

Query: 121 PRTEINYRIKHIDESRGNASISVEKIV-KPEEIKRYQRSKSEKMEVVPREKADRE-MRRS 180
           PRTEINY+IKHIDESRG AS+SVEK+V  PEE KRYQR KSEKMEVV REK DRE ++RS
Sbjct: 121 PRTEINYQIKHIDESRGKASVSVEKVVNNPEETKRYQRCKSEKMEVVLREKVDRELLQRS 180

Query: 181 ETEKCKKIVELKEGRRNSSYPEDGMSNEEFRQTVEAFIARQQRLQREEEFSEF 231
           ETEKCKK+VELKEGRRNSSYPED MSNEEFRQTVEAFIARQQRLQREEEFSEF
Sbjct: 181 ETEKCKKMVELKEGRRNSSYPEDVMSNEEFRQTVEAFIARQQRLQREEEFSEF 233

[Close]

BLAST of PI0028238 vs. NCBI nr
Match: XP_011649236.1 (uncharacterized protein LOC105434603 [Cucumis sativus] >KGN61815.1 hypothetical protein Csa_006191 [Cucumis sativus])

HSP 1 Score: 377.1 bits (967), Expect = 1.1e-100
Identity = 211/232 (90.95%), Postives = 218/232 (93.97%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEK-NQKS 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKK+LVADLYEEFIKNSEK NQKS
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120

Query: 121 PRTEINYRIKHIDESRGNASISVEKIV-KPEEIKRYQRSKSEKMEVVPREKADREMRRSE 180
           PRTE    IKHIDESR  ASISVEKIV  P+E +RY+RSKSE+MEVVPREK DREM+RSE
Sbjct: 121 PRTE----IKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSE 180

Query: 181 TEKCKKIVELKEGRRNSSYPEDGMSNEEFRQTVEAFIARQQRLQREEEFSEF 231
           TEKCKK+VELKEGRRN SY EDGMSNEEFRQTVEAFIARQQRLQREEE SEF
Sbjct: 181 TEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 228

[Close]

BLAST of PI0028238 vs. NCBI nr
Match: XP_038900483.1 (uncharacterized protein LOC120087694 [Benincasa hispida])

HSP 1 Score: 367.5 bits (942), Expect = 8.6e-98
Identity = 200/230 (86.96%), Postives = 212/230 (92.17%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIR EKANAILKYRQ RKIANLFRFIELCLIL+VISRFSSHLPTA KNS+EYF
Sbjct: 1   MESVNFYDIRAEKANAILKYRQLRKIANLFRFIELCLILVVISRFSSHLPTAFKNSSEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNQKSP 120
           R LSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKN VADLYEEFI+NSEKNQK+ 
Sbjct: 61  RYLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFIQNSEKNQKTR 120

Query: 121 RTEINYRIKHIDESRGNASISVEKIVKPEEIKRYQRSKSEKMEVVPREKADREMRRSETE 180
           R EI YRIK ID+SRG++SISV+KIV P+EIKRYQRSKSEKMEVV RE  DRE+RRSETE
Sbjct: 121 RAEIEYRIKQIDDSRGDSSISVKKIVNPQEIKRYQRSKSEKMEVVQRENLDRELRRSETE 180

Query: 181 KCKKIVELKEGRRNSSYPEDGMSNEEFRQTVEAFIARQQRLQREEEFSEF 231
           K KKIV L+E RRNSSYPEDGMSNEEFRQTVEAFIARQQRL+REEEF  F
Sbjct: 181 KFKKIVGLREDRRNSSYPEDGMSNEEFRQTVEAFIARQQRLRREEEFCGF 230

[Close]

BLAST of PI0028238 vs. NCBI nr
Match: XP_022146107.1 (uncharacterized protein LOC111015401 [Momordica charantia])

HSP 1 Score: 328.9 bits (842), Expect = 3.4e-86
Identity = 178/230 (77.39%), Postives = 198/230 (86.09%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIR EKANAILK+RQ RKIANLFRFIELCL+L++ISRFSSHLP+A+KNS EYF
Sbjct: 1   MESVNFYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNQKSP 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKN VADLYE+FIKNSEKNQK+ 
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTR 120

Query: 121 RTEINYRIKHIDESRGNASISVEKIVKPEEIKRYQRSKSEKMEVVPREKADREMRRSETE 180
             EI YR K ID   G+AS++ +K+V PEEIK Y+RS+SEK+ V  +E   RE+RRSETE
Sbjct: 121 HAEIEYRTKQID-GDGDASVAAKKVVNPEEIKLYRRSQSEKIAVAQQENPQRELRRSETE 180

Query: 181 KCKKIVELKEGRRNSSYPEDGMSNEEFRQTVEAFIARQQRLQREEEFSEF 231
           KCKK+V   EG   SSYPED MSNEEFRQTVEAFIARQQRL+REEE   F
Sbjct: 181 KCKKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEHCVF 229

[Close]

BLAST of PI0028238 vs. NCBI nr
Match: KAG7010922.1 (hypothetical protein SDJN02_27720, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 322.4 bits (825), Expect = 3.2e-84
Identity = 180/234 (76.92%), Postives = 198/234 (84.62%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYD+R  K NAILKYRQ RKIANLFRFIELCLIL+VI+RFSS+LP+A KNS EYF
Sbjct: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVITRFSSNLPSAFKNSGEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNQKSP 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKN VADLYEEF++NSEKNQK+ 
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKNQKTR 120

Query: 121 RTEINYRIKHIDESRGN----ASISVEKIVKPEEIKRYQRSKSEKMEVVPREKADREMRR 180
           R EI YR+K ID+SRGN     SI+++KI    EIK YQRS+SEK+ VV RE   RE+RR
Sbjct: 121 RAEIEYRVKQIDDSRGNGNSDTSIAIKKI---GEIKHYQRSESEKIGVVQRENPHRELRR 180

Query: 181 SETEKCKKIVELKEGRRNSSYPEDGMSNEEFRQTVEAFIARQQRLQREEEFSEF 231
           SETEKCKKIV L E  +N   PED MSNEEFRQTVEAFIARQQRL+REEEF  F
Sbjct: 181 SETEKCKKIVRLSEETKNRPSPEDRMSNEEFRQTVEAFIARQQRLRREEEFCVF 231

[Close]

BLAST of PI0028238 vs. TAIR 10
Match: AT4G34560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 117.1 bits (292), Expect = 1.9e-26
Identity = 96/237 (40.51%), Postives = 139/237 (58.65%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           M+ + F  ++ EK+  IL ++  R   +LFR  EL L++I+IS+ S     ++K S + F
Sbjct: 1   MDPIKFQHLKMEKSRGILNFQAIRSFTSLFRLFELLLLVILISKLSF---PSVKISGDIF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAK-DPSKKNLVA---DLYEEFIKNSEKN 120
           +  +V L+SPRFVF IGNAIVITL AKSG++S+  +PSK    A   DLY+EF+  SEK 
Sbjct: 61  KEAAVFLVSPRFVFFIGNAIVITLLAKSGRYSSSHEPSKTATEAASNDLYQEFLHKSEK- 120

Query: 121 QKSPRTEINYRIKHIDESRGNASISVEKIVKPEEIKR--YQRSKSEKM--EVVPRE--KA 180
            K P   + Y  K             E++ KP   KR  + RS+S K    V P E    
Sbjct: 121 -KKP---VVYATK------------TEQLKKPSGGKRVSFGRSQSHKAFEAVKPLESTNG 180

Query: 181 DREMRRSETEKCKKIVEL-KEGRRNSSYPEDGMSNEEFRQTVEAFIARQQRLQREEE 227
           ++ M+R  +EK  ++ +  K+       PEDGMSNE+FR  +EAFIARQ+R+Q++EE
Sbjct: 181 EKNMKRYVSEKHMRVCDSDKKVVVRVKKPEDGMSNEQFRTKIEAFIARQKRIQKDEE 217

[Close]

BLAST of PI0028238 vs. TAIR 10
Match: AT5G66440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 100.9 bits (250), Expect = 1.4e-21
Identity = 75/247 (30.36%), Postives = 134/247 (54.25%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           M+S +F +++ EKA A+ ++ +F +I   FR  E+C+ L+ I    S LP  ++ S  + 
Sbjct: 1   MDSFDFDNVKAEKAKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAFL 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNQKSP 120
           R ++  + +P FVFL+GN+IV+ L  KS   +    +  +   ++Y+ F+++ E   K  
Sbjct: 61  RRIAAVISTPLFVFLLGNSIVVVLLTKSSDQTT--TAVASAETEIYQAFVRSVENRSKPS 120

Query: 121 RTEINYRIKHIDES------RGNASISVEKIVKPEEI--------KRYQRSKSE----KM 180
             ++   I + D+         N +++V++ +   EI        K Y RSKS+    + 
Sbjct: 121 DEDLTEGIVYDDKQVIVTDLDSNPNLTVDENMPHVEIDSDSSPHSKVYGRSKSDVSGKQS 180

Query: 181 EVVPREKADREMRRSETEK-CKKIVELKEGRRNSSYPEDGMSNEEFRQTVEAFIARQQRL 229
             +      R ++RSETEK CK+     +     +YPED +SNEEF++T+EAFIA+Q+  
Sbjct: 181 SNMVMMMMKRSLQRSETEKFCKETENDDDSEEEKNYPEDDLSNEEFQKTIEAFIAKQRMF 240

[Close]

BLAST of PI0028238 vs. TAIR 10
Match: AT2G21560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39190.1); Has 3685 Blast hits to 2305 proteins in 270 species: Archae - 0; Bacteria - 156; Metazoa - 1145; Fungi - 322; Plants - 177; Viruses - 6; Other Eukaryotes - 1879 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 2.1e-09
Identity = 71/276 (25.72%), Postives = 132/276 (47.83%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLF-RFIELCLILIVISRFSSHLPTALKNSTEY 60
           M+S++    +  K   ++K  + + + +LF R IE+ L++I +++    L   +++S   
Sbjct: 1   MDSLSTQKAKPRKMKVVVKKSRAQVLLDLFYRVIEITLVIITLAKLCYQLVITVESSG-- 60

Query: 61  FRCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNQKS 120
              L+  LI+    F++GN IVIT+  K G F+ ++   +    D Y+EF++ S + ++ 
Sbjct: 61  ---LASFLINRHLAFVLGNTIVITIVVKCGFFANQETDARRNRNDFYDEFVRESSRGERR 120

Query: 121 PRTEINYRIKH----------IDESRGNASISVEK--IVKP-------EEIKRYQRSKSE 180
             T++  R K           I+E+R   SI  ++    KP       ++    +R K +
Sbjct: 121 LHTDVICREKQSEVESVAKQSIEENRAKQSIEDKRQSRAKPSMSENRAKQSTEEKREKLK 180

Query: 181 KMEVVPREKADREMRRSE--TEKCKKIV----------------ELKEGRRNSS------ 228
           K E+  R+ +  E  + +   +K ++IV                E  EG + SS      
Sbjct: 181 KSEISGRQSSGDESEKKDITVKKQRQIVAQNQDSPMKSYERSRSENHEGSKKSSCVQLKR 240

[Close]

BLAST of PI0028238 vs. TAIR 10
Match: AT4G39190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G21560.1); Has 5536 Blast hits to 3562 proteins in 401 species: Archae - 12; Bacteria - 497; Metazoa - 1363; Fungi - 374; Plants - 149; Viruses - 22; Other Eukaryotes - 3119 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 2.2e-06
Identity = 68/250 (27.20%), Postives = 110/250 (44.00%), Query Frame = 0


Query: 30  FRFIELCLILIVISRFSSHLPTALKNSTEYFRCLSVTLISPRFVFLIGNAIVITLFAKSG 89
           FR IE+ ++L+ +++ S  L    ++S+      SV L +    F+IGNAIVI L AKSG
Sbjct: 32  FRAIEIVVVLVTLAKLSYELVVTFEDSS----VASVILANRSLAFVIGNAIVIALIAKSG 91

Query: 90  QFSAKDPSKKNLVADLYEEFI------------------KNSEKNQKSPRTEINYRIKH- 149
               ++   K    DLYE+F+                  K SE   ++ ++    + K  
Sbjct: 92  ILLNQEHDPKCKSNDLYEDFVLESSRRGGFSQDEMRSGEKQSEAENEAKQSITENKAKEN 151

Query: 150 -----IDESRGNASISVEKIVKPEEIKRYQRSKSEKM----EVVPREKAD---------- 209
                I ESR   S++ +K  +    K+ ++SK EK+      V REK            
Sbjct: 152 EEKQSITESRVKKSVTEKKTKRIISEKKVKQSKPEKLTKQSTSVNREKQSEVEHKDITMT 211

Query: 210 ------------REMRRSETEKCKKIVELKEGRRNSSYPEDGM----SNEEFRQTVEAFI 226
                       +  +RS++E  K + +   GR   S  +       S++E R  +E+FI
Sbjct: 212 IEKQNLTEKRQIQSYQRSKSENLKVLEKSSCGRLKRSETDASAERFDSDDELRYKIESFI 271

The following BLAST results are available for this feature:

BLAST of PI0028238 vs.


Match Name	E-value	Identity	Description

BLAST of PI0028238 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DZ88	1.5e-103	92.27	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CDN2	1.5e-103	92.27	uncharacterized protein LOC103499689 OS=Cucumis melo OX=3656 GN=LOC103499689 PE=...	[more]
A0A0A0LIS8	5.3e-101	90.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G248720 PE=4 SV=1	[more]
A0A6J1CYN5	1.6e-86	77.39	uncharacterized protein LOC111015401 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1JGH7	1.3e-83	76.27	uncharacterized protein LOC111484294 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of PI0028238 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460958.1	3.1e-103	92.27	PREDICTED: uncharacterized protein LOC103499689 [Cucumis melo] >KAA0045570.1 unc...	[more]
XP_011649236.1	1.1e-100	90.95	uncharacterized protein LOC105434603 [Cucumis sativus] >KGN61815.1 hypothetical ...	[more]
XP_038900483.1	8.6e-98	86.96	uncharacterized protein LOC120087694 [Benincasa hispida]	[more]
XP_022146107.1	3.4e-86	77.39	uncharacterized protein LOC111015401 [Momordica charantia]	[more]
KAG7010922.1	3.2e-84	76.92	hypothetical protein SDJN02_27720, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of PI0028238 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34560.1	1.9e-26	40.51	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G66440.1	1.4e-21	30.36	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G21560.1	2.1e-09	25.72	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G39190.1	2.2e-06	27.20	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 204..224
None	No IPR available	PANTHER	PTHR33640:SF8	TRANSMEMBRANE PROTEIN	coord: 1..228
None	No IPR available	PANTHER	PTHR33640	TRANSMEMBRANE PROTEIN	coord: 1..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0028238.1	PI0028238.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane