PI0028099 (gene) Melon (PI 482460) v1

Overview
NamePI0028099
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr08: 5026360 .. 5026733 (+)
RNA-Seq ExpressionPI0028099
SyntenyPI0028099
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAAAAAAAAAAAAAAAGAAAGAAACCTTTAAGAAACTCTCTCTTTTTTTGGGTAAAAGTTAGGGTTTTTTAGGTTTGTGGTGAGCCATGGCTGGGCTCCAATACAACTTCTTTCCCACTGATCTCCTTTACCCTAAACCATCTTCTTCTTCTTCCTCAGAAGCCATTAATAGGGCAAGTGTGTCCTTCAAAACCCCTCTAAGAGGCAATAAAGGTGAGGAAGATATTGATCATGGTGATGAACCCAAGAGTTTGATCTCTCAAAAGGTTGATAGATCACCATTGATTCTCAAGCATCAAATCAAGAGTACTTCTTCAACTTTCTAAACATTCAACCCATGATCAATTGATTTATAATGGGCTCTACTCTTC

mRNA sequence

AAGAAAAAAAAAAAAAAAAGAAAGAAACCTTTAAGAAACTCTCTCTTTTTTTGGGTAAAAGTTAGGGTTTTTTAGGTTTGTGGTGAGCCATGGCTGGGCTCCAATACAACTTCTTTCCCACTGATCTCCTTTACCCTAAACCATCTTCTTCTTCTTCCTCAGAAGCCATTAATAGGGCAAGTGTGTCCTTCAAAACCCCTCTAAGAGGCAATAAAGGTGAGGAAGATATTGATCATGGTGATGAACCCAAGAGTTTGATCTCTCAAAAGGTTGATAGATCACCATTGATTCTCAAGCATCAAATCAAGAGTACTTCTTCAACTTTCTAAACATTCAACCCATGATCAATTGATTTATAATGGGCTCTACTCTTC

Coding sequence (CDS)

ATGGCTGGGCTCCAATACAACTTCTTTCCCACTGATCTCCTTTACCCTAAACCATCTTCTTCTTCTTCCTCAGAAGCCATTAATAGGGCAAGTGTGTCCTTCAAAACCCCTCTAAGAGGCAATAAAGGTGAGGAAGATATTGATCATGGTGATGAACCCAAGAGTTTGATCTCTCAAAAGGTTGATAGATCACCATTGATTCTCAAGCATCAAATCAAGAGTACTTCTTCAACTTTCTAA

Protein sequence

MAGLQYNFFPTDLLYPKPSSSSSSEAINRASVSFKTPLRGNKGEEDIDHGDEPKSLISQKVDRSPLILKHQIKSTSSTF
Homology
BLAST of PI0028099 vs. ExPASy TrEMBL
Match: A0A0A0KWJ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G218340 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.4e-29
Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 0

Query: 1  MAGLQYNFFPTDLLYPKP-SSSSSSEAINRASVSFKTPLRGNKG-EEDIDHGDEPKS--L 60
          MAGLQYNFFPTDLLYPKP SSSSSSEAINRASV+FKTPLRGNKG +EDIDHGDEPKS  +
Sbjct: 1  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTPLRGNKGDQEDIDHGDEPKSRLM 60

Query: 61 ISQKVDRSPLILKHQIKSTSST 79
          ISQKVDRSPLILKHQIKSTSS+
Sbjct: 61 ISQKVDRSPLILKHQIKSTSSS 82

BLAST of PI0028099 vs. ExPASy TrEMBL
Match: A0A5A7V9D3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold258G00320 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.0e-27
Identity = 74/82 (90.24%), Postives = 75/82 (91.46%), Query Frame = 0

Query: 1  MAGLQYNFFPTDLLYPKP-SSSSSSEAINRASVSFKTPLRGNKGEEDIDHGDEPKS-LIS 60
          MAGLQYNFFPTDLLYPKP SSSSSSEAINRASV+FKT LRGNKGEEDIDHGDE KS L S
Sbjct: 1  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTTLRGNKGEEDIDHGDERKSRLFS 60

Query: 61 QKV-DRSPLILKHQIKSTSSTF 80
          QKV DRSPLILKHQ KSTSSTF
Sbjct: 61 QKVADRSPLILKHQSKSTSSTF 82

BLAST of PI0028099 vs. ExPASy TrEMBL
Match: E5GC02 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.0e-27
Identity = 74/82 (90.24%), Postives = 75/82 (91.46%), Query Frame = 0

Query: 1  MAGLQYNFFPTDLLYPKP-SSSSSSEAINRASVSFKTPLRGNKGEEDIDHGDEPKS-LIS 60
          MAGLQYNFFPTDLLYPKP SSSSSSEAINRASV+FKT LRGNKGEEDIDHGDE KS L S
Sbjct: 1  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTTLRGNKGEEDIDHGDERKSRLFS 60

Query: 61 QKV-DRSPLILKHQIKSTSSTF 80
          QKV DRSPLILKHQ KSTSSTF
Sbjct: 61 QKVADRSPLILKHQSKSTSSTF 82

BLAST of PI0028099 vs. NCBI nr
Match: KGN53975.1 (hypothetical protein Csa_018873 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 1.1e-28
Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 0

Query: 1  MAGLQYNFFPTDLLYPKP-SSSSSSEAINRASVSFKTPLRGNKG-EEDIDHGDEPKS--L 60
          MAGLQYNFFPTDLLYPKP SSSSSSEAINRASV+FKTPLRGNKG +EDIDHGDEPKS  +
Sbjct: 1  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTPLRGNKGDQEDIDHGDEPKSRLM 60

Query: 61 ISQKVDRSPLILKHQIKSTSST 79
          ISQKVDRSPLILKHQIKSTSS+
Sbjct: 61 ISQKVDRSPLILKHQIKSTSSS 82

BLAST of PI0028099 vs. NCBI nr
Match: ADN34001.1 (hypothetical protein [Cucumis melo subsp. melo] >KAA0063834.1 hypothetical protein E6C27_scaffold827G00560 [Cucumis melo var. makuwa] >TYK28218.1 hypothetical protein E5676_scaffold258G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 132.1 bits (331), Expect = 2.1e-27
Identity = 74/82 (90.24%), Postives = 75/82 (91.46%), Query Frame = 0

Query: 1  MAGLQYNFFPTDLLYPKP-SSSSSSEAINRASVSFKTPLRGNKGEEDIDHGDEPKS-LIS 60
          MAGLQYNFFPTDLLYPKP SSSSSSEAINRASV+FKT LRGNKGEEDIDHGDE KS L S
Sbjct: 1  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTTLRGNKGEEDIDHGDERKSRLFS 60

Query: 61 QKV-DRSPLILKHQIKSTSSTF 80
          QKV DRSPLILKHQ KSTSSTF
Sbjct: 61 QKVADRSPLILKHQSKSTSSTF 82

BLAST of PI0028099 vs. NCBI nr
Match: KAG6603410.1 (hypothetical protein SDJN03_04019, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 114.4 bits (285), Expect = 4.5e-22
Identity = 63/86 (73.26%), Postives = 69/86 (80.23%), Query Frame = 0

Query: 1  MAGLQYNFFPTDLLYPKP--------SSSSSSEAINRASVSFKTPLRGNKGEEDIDHGDE 60
          MAGLQYNFFPTDLLYPKP        SSSSSS+AINRASV+FK P+RGN+ EED DHGD 
Sbjct: 1  MAGLQYNFFPTDLLYPKPSSSSSSSSSSSSSSDAINRASVTFKKPVRGNQDEED-DHGDG 60

Query: 61 PKSLISQKVDRSPLILKHQIKSTSST 79
           KSL  QK DRSPLILKHQ+K+ SST
Sbjct: 61 AKSLSIQKGDRSPLILKHQVKNDSST 85

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KWJ25.4e-2990.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G218340 PE=4 SV=1[more]
A0A5A7V9D31.0e-2790.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
E5GC021.0e-2790.24Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN53975.11.1e-2890.24hypothetical protein Csa_018873 [Cucumis sativus][more]
ADN34001.12.1e-2790.24hypothetical protein [Cucumis melo subsp. melo] >KAA0063834.1 hypothetical prote... [more]
KAG6603410.14.5e-2273.26hypothetical protein SDJN03_04019, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..35
NoneNo IPR availablePANTHERPTHR38223FAMILY NOT NAMEDcoord: 1..64

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0028099.1PI0028099.1mRNA