PI0028062 (gene) Melon (PI 482460) v1

Overview
NamePI0028062
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr03: 5478204 .. 5478599 (+)
RNA-Seq ExpressionPI0028062
SyntenyPI0028062
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCAAAGGGATCCAAAAGGCATCAGAGCTTGAGAATGGAGGATTTTGGAGAAGGAGCAGCTGCAGCTGCAGCTGAGTTTCCAGGCTTTCAAACCAATGTTGCTCATAGAGATGACATGGTTTACCGGAGGTCGTTGACTCGGTTGCAACGCTTTGCTCCCCAACCTCTCCCGTTGCCACGTCTTACCTCTTTTCCCTCGTGTGGTGGTGCATCGAAACGACCTCCTGTTGAAAACAACAACAACAATTCTTCTTCTTTTTCTTCAACACCAAATGCATCTTTTCACTGTACAGATCCAATTCCATTACTTTCACCCCTTGTATGTCCTTCATTGTTTGAGTCTCACTATGTCATTCAAAAAAATGTTACTACCAAGTTTAGTCGAACCTGA

mRNA sequence

ATGGAAGCAAAGGGATCCAAAAGGCATCAGAGCTTGAGAATGGAGGATTTTGGAGAAGGAGCAGCTGCAGCTGCAGCTGAGTTTCCAGGCTTTCAAACCAATGTTGCTCATAGAGATGACATGGTTTACCGGAGGTCGTTGACTCGGTTGCAACGCTTTGCTCCCCAACCTCTCCCGTTGCCACGTCTTACCTCTTTTCCCTCGTGTGGTGGTGCATCGAAACGACCTCCTGTTGAAAACAACAACAACAATTCTTCTTCTTTTTCTTCAACACCAAATGCATCTTTTCACTGTACAGATCCAATTCCATTACTTTCACCCCTTGTATGTCCTTCATTGTTTGAGTCTCACTATGTCATTCAAAAAAATGTTACTACCAAGTTTAGTCGAACCTGA

Coding sequence (CDS)

ATGGAAGCAAAGGGATCCAAAAGGCATCAGAGCTTGAGAATGGAGGATTTTGGAGAAGGAGCAGCTGCAGCTGCAGCTGAGTTTCCAGGCTTTCAAACCAATGTTGCTCATAGAGATGACATGGTTTACCGGAGGTCGTTGACTCGGTTGCAACGCTTTGCTCCCCAACCTCTCCCGTTGCCACGTCTTACCTCTTTTCCCTCGTGTGGTGGTGCATCGAAACGACCTCCTGTTGAAAACAACAACAACAATTCTTCTTCTTTTTCTTCAACACCAAATGCATCTTTTCACTGTACAGATCCAATTCCATTACTTTCACCCCTTGTATGTCCTTCATTGTTTGAGTCTCACTATGTCATTCAAAAAAATGTTACTACCAAGTTTAGTCGAACCTGA

Protein sequence

MEAKGSKRHQSLRMEDFGEGAAAAAAEFPGFQTNVAHRDDMVYRRSLTRLQRFAPQPLPLPRLTSFPSCGGASKRPPVENNNNNSSSFSSTPNASFHCTDPIPLLSPLVCPSLFESHYVIQKNVTTKFSRT
Homology
BLAST of PI0028062 vs. ExPASy TrEMBL
Match: A0A0A0KDQ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G367140 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.4e-44
Identity = 104/134 (77.61%), Postives = 111/134 (82.84%), Query Frame = 0

Query: 1   MEAKGSKRHQSLR-MEDFGEGAAAAAAEFPGFQTNVAHRDDMVYRRSLTRLQRFAPQPLP 60
           MEAKGSK  ++   MEDFG    A AAEFPGFQTNVAHRDD+VYRRSLTRLQR AP PL 
Sbjct: 1   MEAKGSKGIKAWELMEDFG----ADAAEFPGFQTNVAHRDDIVYRRSLTRLQRCAPHPLS 60

Query: 61  LPRLTSFPSCGGASKRPP--VENNNNNSSSFSSTPNASFHCTDPIPLLSPLVCPSLFESH 120
           LPR TSFPSCGGASK+PP  VENNNN SS  S++ NASFHC DPIPLLSPLVCPSLFESH
Sbjct: 61  LPRPTSFPSCGGASKQPPPLVENNNNCSSFSSTSNNASFHCIDPIPLLSPLVCPSLFESH 120

Query: 121 YVIQKNVTTKFSRT 132
            VI+KNVTTK SRT
Sbjct: 121 CVIEKNVTTKSSRT 130

BLAST of PI0028062 vs. ExPASy TrEMBL
Match: A0A6A1V1J8 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR7G020458 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 7.3e-15
Identity = 55/102 (53.92%), Postives = 69/102 (67.65%), Query Frame = 0

Query: 25  AAEFPGFQTNVAHRDDMVYRRSLTRLQRFAPQPLPLPRLTSFPS-CGGASKRPPVENNNN 84
           +AEFPGFQT V H+DD VYR SL+RLQR AP PL L + ++ PS C G    P     ++
Sbjct: 6   SAEFPGFQTCV-HKDDFVYRSSLSRLQRRAPSPLQLIKPSTVPSACNGP---PKTFVGSS 65

Query: 85  NSSSFSSTPNASFHCTDPIPLLSPLVCPSLFESHYVIQKNVT 126
           +SSS SS+ N  ++  DPIPLLSPL  PSL ES YV + N+T
Sbjct: 66  SSSSSSSSMNPFYYSKDPIPLLSPLALPSLLESAYVQEGNIT 103

BLAST of PI0028062 vs. ExPASy TrEMBL
Match: A0A2I4H8F7 (uncharacterized protein LOC109014412 OS=Juglans regia OX=51240 GN=LOC109014412 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.8e-14
Identity = 55/105 (52.38%), Postives = 74/105 (70.48%), Query Frame = 0

Query: 23  AAAAEFPGFQTNVAHRDDMVYRRSLTRLQRFAPQPLPL-PRLTSFPSCGGASKRPPVENN 82
           ++ AEFPGFQT   H+DD V+ RSL+RLQR AP PL L P++ S  +C GA+ +  V  +
Sbjct: 4   SSTAEFPGFQT--FHKDDFVFGRSLSRLQRRAPSPLQLKPKVPS--ACNGAAAKSFVGTS 63

Query: 83  NNNSSSFSSTPNASFHCT-DPIPLLSPLVCPSLFESHYVIQKNVT 126
           N++SS+ SS+ N+ ++   DPIPLLSPLV PSL ES YV + N T
Sbjct: 64  NSSSSTSSSSLNSFYYSNKDPIPLLSPLVLPSLLESAYVQEGNTT 104

BLAST of PI0028062 vs. ExPASy TrEMBL
Match: A0A2P5CTY4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_273200 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.6e-12
Identity = 51/102 (50.00%), Postives = 71/102 (69.61%), Query Frame = 0

Query: 25  AAEFPGFQTNVAHRDDMVYRRSLTRLQRFAPQPLPL-PRLTSFPSCGGASKRPPVENNNN 84
           A +FPGFQT  AH+DD+V +RSL+RLQR AP PL L P++ S    G  S+    ++++ 
Sbjct: 7   ADQFPGFQT-YAHKDDIVLKRSLSRLQRRAPCPLQLKPKVYSSCHGGVKSQGSCSKSSSP 66

Query: 85  NSSSFSSTPNASFHCTDPIPLLSPLVCPSLFESHYVIQKNVT 126
           +S+S SS+ ++ +H  DPIPLLSPLV PSL ES  + Q+N T
Sbjct: 67  SSTSSSSSLSSFYHSKDPIPLLSPLVLPSLLESACIQQENAT 107

BLAST of PI0028062 vs. ExPASy TrEMBL
Match: A0A2P6R2B2 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0437411 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 7.6e-12
Identity = 54/110 (49.09%), Postives = 66/110 (60.00%), Query Frame = 0

Query: 14  MEDFGEGAAAAAAEFPGFQTNVAHRDDMVYRRSLTRLQRFAPQPLPLPRLTSFPSCGGAS 73
           MED G        EFPGFQT  AH+DD ++RR L+RLQR AP PL   +L   P+   AS
Sbjct: 1   MEDTG-------TEFPGFQT-CAHKDDSIFRRRLSRLQRRAPYPL---QLIKQPNNNNAS 60

Query: 74  KRPPVENNNNNSSSFSSTPNASFHCTDPIPLLSPLVCPSLFESHYVIQKN 124
                 ++NN+SS  SS  +  +   DPIPLLSPLV PSL ES Y+ Q N
Sbjct: 61  SSGCTSSSNNSSS--SSLNSFIYQSKDPIPLLSPLVLPSLLESAYIQQVN 97

BLAST of PI0028062 vs. NCBI nr
Match: KAE8647257.1 (hypothetical protein Csa_018305, partial [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 9.1e-44
Identity = 104/134 (77.61%), Postives = 111/134 (82.84%), Query Frame = 0

Query: 1   MEAKGSKRHQSLR-MEDFGEGAAAAAAEFPGFQTNVAHRDDMVYRRSLTRLQRFAPQPLP 60
           MEAKGSK  ++   MEDFG    A AAEFPGFQTNVAHRDD+VYRRSLTRLQR AP PL 
Sbjct: 1   MEAKGSKGIKAWELMEDFG----ADAAEFPGFQTNVAHRDDIVYRRSLTRLQRCAPHPLS 60

Query: 61  LPRLTSFPSCGGASKRPP--VENNNNNSSSFSSTPNASFHCTDPIPLLSPLVCPSLFESH 120
           LPR TSFPSCGGASK+PP  VENNNN SS  S++ NASFHC DPIPLLSPLVCPSLFESH
Sbjct: 61  LPRPTSFPSCGGASKQPPPLVENNNNCSSFSSTSNNASFHCIDPIPLLSPLVCPSLFESH 120

Query: 121 YVIQKNVTTKFSRT 132
            VI+KNVTTK SRT
Sbjct: 121 CVIEKNVTTKSSRT 130

BLAST of PI0028062 vs. NCBI nr
Match: KAB1206573.1 (hypothetical protein CJ030_MR7G020458 [Morella rubra] >KAB1206574.1 hypothetical protein CJ030_MR7G020459 [Morella rubra])

HSP 1 Score: 90.1 bits (222), Expect = 1.5e-14
Identity = 55/102 (53.92%), Postives = 69/102 (67.65%), Query Frame = 0

Query: 25  AAEFPGFQTNVAHRDDMVYRRSLTRLQRFAPQPLPLPRLTSFPS-CGGASKRPPVENNNN 84
           +AEFPGFQT V H+DD VYR SL+RLQR AP PL L + ++ PS C G    P     ++
Sbjct: 6   SAEFPGFQTCV-HKDDFVYRSSLSRLQRRAPSPLQLIKPSTVPSACNGP---PKTFVGSS 65

Query: 85  NSSSFSSTPNASFHCTDPIPLLSPLVCPSLFESHYVIQKNVT 126
           +SSS SS+ N  ++  DPIPLLSPL  PSL ES YV + N+T
Sbjct: 66  SSSSSSSSMNPFYYSKDPIPLLSPLALPSLLESAYVQEGNIT 103

BLAST of PI0028062 vs. NCBI nr
Match: XP_042979927.1 (uncharacterized protein LOC122310107 [Carya illinoinensis] >KAG2706907.1 hypothetical protein I3760_05G123700 [Carya illinoinensis] >KAG6654100.1 hypothetical protein CIPAW_05G122300 [Carya illinoinensis] >KAG6712790.1 hypothetical protein I3842_05G119400 [Carya illinoinensis])

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-14
Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 0

Query: 23  AAAAEFPGFQTNVAHRDDMVYRRSLTRLQRFAPQPLPL-PRLTSFPSCGGASKRPPV-EN 82
           ++ AEFPGFQT   H+DD V+ RSL+RLQR AP PL L P++ S  +C GA+ +  V  +
Sbjct: 4   SSTAEFPGFQT--FHKDDFVFGRSLSRLQRRAPSPLQLKPKVPS--ACNGAAAKSFVGTS 63

Query: 83  NNNNSSSFSSTPNASFHCTDPIPLLSPLVCPSLFESHYVIQKNVT 126
           N+++SSS SS+ N+ ++  DPIPLLSPLV PSL ES YV + N T
Sbjct: 64  NSSSSSSSSSSLNSFYYSKDPIPLLSPLVSPSLLESAYVQEGNTT 104

BLAST of PI0028062 vs. NCBI nr
Match: XP_018852423.1 (uncharacterized protein LOC109014412 [Juglans regia] >KAF5449485.1 hypothetical protein F2P56_029926 [Juglans regia])

HSP 1 Score: 88.2 bits (217), Expect = 5.7e-14
Identity = 55/105 (52.38%), Postives = 74/105 (70.48%), Query Frame = 0

Query: 23  AAAAEFPGFQTNVAHRDDMVYRRSLTRLQRFAPQPLPL-PRLTSFPSCGGASKRPPVENN 82
           ++ AEFPGFQT   H+DD V+ RSL+RLQR AP PL L P++ S  +C GA+ +  V  +
Sbjct: 4   SSTAEFPGFQT--FHKDDFVFGRSLSRLQRRAPSPLQLKPKVPS--ACNGAAAKSFVGTS 63

Query: 83  NNNSSSFSSTPNASFHCT-DPIPLLSPLVCPSLFESHYVIQKNVT 126
           N++SS+ SS+ N+ ++   DPIPLLSPLV PSL ES YV + N T
Sbjct: 64  NSSSSTSSSSLNSFYYSNKDPIPLLSPLVLPSLLESAYVQEGNTT 104

BLAST of PI0028062 vs. NCBI nr
Match: XP_023873319.1 (uncharacterized protein LOC111985907 [Quercus suber])

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-12
Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 0

Query: 24  AAAEFPGFQTNVAHRDDMVYRRSLT-RLQRFAPQPLPL-PRLTSFPSCGGASKRPPVENN 83
           ++AEFPGFQT V H+DD V+ RSL+ RLQR AP PL L PR+ +  +C GA    P  + 
Sbjct: 4   SSAEFPGFQTCV-HKDDFVFGRSLSRRLQRQAPCPLQLKPRVPT--ACNGAPN--PFLSG 63

Query: 84  NNNSSSFSSTPNASFHCTDPIPLLSPLVCPSLFESHYVIQKNVT 126
           +N SSS SS+ N+ +H  +PIPLLSPLV PS  ES Y+ + N T
Sbjct: 64  SNPSSSSSSSLNSFYHSKEPIPLLSPLVLPSFLESAYIQEGNTT 102

BLAST of PI0028062 vs. TAIR 10
Match: AT1G69050.1 (unknown protein; Has 9 Blast hits to 9 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 4.5e-09
Identity = 49/114 (42.98%), Postives = 59/114 (51.75%), Query Frame = 0

Query: 14  MEDFGEGAAAAAAEFPGFQTNVAHRDDMVYRRSLT-RLQRFAPQPLPLPRLTSFPSCGGA 73
           MED G         FPGF+  V H DD V+RRSL+ RLQR AP PL LP           
Sbjct: 1   MEDSGR----KGDPFPGFEMRV-HNDDCVFRRSLSCRLQRRAPCPLLLP----------- 60

Query: 74  SKRPPVENNNNNSSSFSSTPNASFHCTDPIPLLSPLVCPSLFESHYVIQKNVTT 127
             RPP      ++++  ST     + TDPIPLLSPLV PS+      +Q N TT
Sbjct: 61  -PRPPPSAEAPSTTTGVSTSTFCQNGTDPIPLLSPLVLPSM------LQPNPTT 91

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KDQ24.4e-4477.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G367140 PE=4 SV=1[more]
A0A6A1V1J87.3e-1553.92Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR7G020458 PE=4 SV=1[more]
A0A2I4H8F72.8e-1452.38uncharacterized protein LOC109014412 OS=Juglans regia OX=51240 GN=LOC109014412 P... [more]
A0A2P5CTY42.6e-1250.00Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_273200 PE=4 SV... [more]
A0A2P6R2B27.6e-1249.09Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0437411 PE=4... [more]
Match NameE-valueIdentityDescription
KAE8647257.19.1e-4477.61hypothetical protein Csa_018305, partial [Cucumis sativus][more]
KAB1206573.11.5e-1453.92hypothetical protein CJ030_MR7G020458 [Morella rubra] >KAB1206574.1 hypothetical... [more]
XP_042979927.12.0e-1453.33uncharacterized protein LOC122310107 [Carya illinoinensis] >KAG2706907.1 hypothe... [more]
XP_018852423.15.7e-1452.38uncharacterized protein LOC109014412 [Juglans regia] >KAF5449485.1 hypothetical ... [more]
XP_023873319.11.1e-1252.88uncharacterized protein LOC111985907 [Quercus suber][more]
Match NameE-valueIdentityDescription
AT1G69050.14.5e-0942.98unknown protein; Has 9 Blast hits to 9 proteins in 4 species: Archae - 0; Bacter... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0028062.1PI0028062.1mRNA