PI0027792 (gene) Melon (PI 482460) v1

Overview
NamePI0027792
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr08: 7909288 .. 7909476 (+)
RNA-Seq ExpressionPI0027792
SyntenyPI0027792
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGTTATTGTTACCTACTTGAGGAGGTTAACATATATGAGGAAGAGAAAATTACCATGAATCGATTCTACAATGGACTTAATGAGAAAATTATCGATATGCTTGTCGACCGAGAAGAAAATCGACCTTGTGAGGACGTGGAAGAAATGGTGCACATTGCCATCAAGATAGAAAGGCTACTCTAA

mRNA sequence

ATGAAGAGTTATTGTTACCTACTTGAGGAGGTTAACATATATGAGGAAGAGAAAATTACCATGAATCGATTCTACAATGGACTTAATGAGAAAATTATCGATATGCTTGTCGACCGAGAAGAAAATCGACCTTGTGAGGACGTGGAAGAAATGGTGCACATTGCCATCAAGATAGAAAGGCTACTCTAA

Coding sequence (CDS)

ATGAAGAGTTATTGTTACCTACTTGAGGAGGTTAACATATATGAGGAAGAGAAAATTACCATGAATCGATTCTACAATGGACTTAATGAGAAAATTATCGATATGCTTGTCGACCGAGAAGAAAATCGACCTTGTGAGGACGTGGAAGAAATGGTGCACATTGCCATCAAGATAGAAAGGCTACTCTAA

Protein sequence

MKSYCYLLEEVNIYEEEKITMNRFYNGLNEKIIDMLVDREENRPCEDVEEMVHIAIKIERLL
Homology
[Close]
BLAST of PI0027792 vs. ExPASy TrEMBL
Match: A0A5A7UE26 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G001990 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.4e-08
Identity = 29/51 (56.86%), Postives = 44/51 (86.27%), Query Frame = 0 

Query: 7  LLEEVNIYEEEKITMNRFYNGLNEKIIDMLVDREENRPCEDVEEMVHIAIK 58
          LLE++ IYE++++ +NRFYNGLN++  +MLVD EE R CE++E+MVH+AI+
Sbjct: 15 LLEKMTIYEDKEVVINRFYNGLNKESFEMLVDHEEIRCCENLEDMVHVAIR 65

[Close]
BLAST of PI0027792 vs. NCBI nr
Match: KAA0051791.1 (hypothetical protein E6C27_scaffold60G001990 [Cucumis melo var. makuwa])

HSP 1 Score: 67.4 bits (163), Expect = 5.0e-08
Identity = 29/51 (56.86%), Postives = 44/51 (86.27%), Query Frame = 0 

Query: 7  LLEEVNIYEEEKITMNRFYNGLNEKIIDMLVDREENRPCEDVEEMVHIAIK 58
          LLE++ IYE++++ +NRFYNGLN++  +MLVD EE R CE++E+MVH+AI+
Sbjct: 15 LLEKMTIYEDKEVVINRFYNGLNKESFEMLVDHEEIRCCENLEDMVHVAIR 65

The following BLAST results are available for this feature:
BLAST of PI0027792 vs.
Match NameE-valueIdentityDescription
BLAST of PI0027792 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UE262.4e-0856.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of PI0027792 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0051791.15.0e-0856.86hypothetical protein E6C27_scaffold60G001990 [Cucumis melo var. makuwa][more]
BLAST of PI0027792 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0027792.1PI0027792.1mRNA