Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTACTTATCATCTCGCTGTGGAAATATTTGGATCAAACATCATACAGTCCATATCGGTTTGGGCGGCAGTTTGGCTTTTACCAGGATATCCCTAACGATATAGGGGGTATATCACCTGAAACCACGCCGAGGAATGCATTACATCATTGGAGGATATGTACGAGGCGCAGAACCTTATCTGAGTTATACATGCCTGCCTGTTCATTAGAGCCTAGCAAACATGTGACACCACGATTCAAAAATTGGTGGGCCACGAAGCATGAGACCTATTTTGAGGATAATAGACACCATTTGGTGAGCAGTGCCATTCCTCCCCCGTCACAACCCAAACTACCCAAGAATCGAGGAAGCAATGTGGGTAGCAAACAGATCCGCTTGATTGAGGCAATGGCTCCTATCCATGATAGAGGGGTCAAGGAACAAAAGAGTAGAGCGATAGCAGTAGAAGCGACCGTCATTTGA
mRNA sequence
ATGCTACTTATCATCTCGCTGTGGAAATATTTGGATCAAACATCATACAGTCCATATCGGTTTGGGCGGCAGTTTGGCTTTTACCAGGATATCCCTAACGATATAGGGGGTATATCACCTGAAACCACGCCGAGGAATGCATTACATCATTGGAGGATATGTACGAGGCGCAGAACCTTATCTGAGTTATACATGCCTGCCTGTTCATTAGAGCCTAGCAAACATGTGACACCACGATTCAAAAATTGGTGGGCCACGAAGCATGAGACCTATTTTGAGGATAATAGACACCATTTGGTGAGCAGTGCCATTCCTCCCCCGTCACAACCCAAACTACCCAAGAATCGAGGAAGCAATGTGGGTAGCAAACAGATCCGCTTGATTGAGGCAATGGCTCCTATCCATGATAGAGGGGTCAAGGAACAAAAGAGTAGAGCGATAGCAGTAGAAGCGACCGTCATTTGA
Coding sequence (CDS)
ATGCTACTTATCATCTCGCTGTGGAAATATTTGGATCAAACATCATACAGTCCATATCGGTTTGGGCGGCAGTTTGGCTTTTACCAGGATATCCCTAACGATATAGGGGGTATATCACCTGAAACCACGCCGAGGAATGCATTACATCATTGGAGGATATGTACGAGGCGCAGAACCTTATCTGAGTTATACATGCCTGCCTGTTCATTAGAGCCTAGCAAACATGTGACACCACGATTCAAAAATTGGTGGGCCACGAAGCATGAGACCTATTTTGAGGATAATAGACACCATTTGGTGAGCAGTGCCATTCCTCCCCCGTCACAACCCAAACTACCCAAGAATCGAGGAAGCAATGTGGGTAGCAAACAGATCCGCTTGATTGAGGCAATGGCTCCTATCCATGATAGAGGGGTCAAGGAACAAAAGAGTAGAGCGATAGCAGTAGAAGCGACCGTCATTTGA
Protein sequence
MLLIISLWKYLDQTSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGSKQIRLIEAMAPIHDRGVKEQKSRAIAVEATVI
Homology
BLAST of PI0027733 vs. ExPASy TrEMBL
Match:
A0A5A7TX42 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00950 PE=4 SV=1)
HSP 1 Score: 221.9 bits (564), Expect = 1.9e-54
Identity = 101/133 (75.94%), Postives = 113/133 (84.96%), Query Frame = 0
Query: 14 TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPS 73
TSYSPYRFGRQFGFYQD+PNDIGG+SP T N L+HWRICTRR TLSELY+PA SLEP
Sbjct: 460 TSYSPYRFGRQFGFYQDLPNDIGGMSPAITLDNILYHWRICTRRNTLSELYLPARSLEPC 519
Query: 74 KHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGSKQIRLIEAMAP 133
KHVT RF +WW TKH TYFEDNRHHLVSSAIPP SQP+LPKNRGSN+G K+IRL+EAMAP
Sbjct: 520 KHVTQRFTDWWTTKHGTYFEDNRHHLVSSAIPPSSQPRLPKNRGSNLGGKEIRLVEAMAP 579
Query: 134 IHDRGVKEQKSRA 147
+ VKE+K +
Sbjct: 580 NLEEEVKERKDES 592
BLAST of PI0027733 vs. ExPASy TrEMBL
Match:
A0A5A7UGW6 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G00140 PE=4 SV=1)
HSP 1 Score: 213.8 bits (543), Expect = 5.2e-52
Identity = 97/131 (74.05%), Postives = 108/131 (82.44%), Query Frame = 0
Query: 14 TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPS 73
TSYSPYRFGRQFGFYQD+PNDIGG+ P T N L+HWRIC RR TLSELY+P SLEP
Sbjct: 494 TSYSPYRFGRQFGFYQDLPNDIGGMPPAITLDNILYHWRICMRRNTLSELYLPVRSLEPC 553
Query: 74 KHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGSKQIRLIEAMAP 133
KHVT RF +WW TKH YFEDNRHHLVSSAIPPPSQP+LPKNRGSN+G K+IRL+EAMAP
Sbjct: 554 KHVTQRFTDWWTTKHMNYFEDNRHHLVSSAIPPPSQPRLPKNRGSNLGGKEIRLVEAMAP 613
Query: 134 IHDRGVKEQKS 145
+ V E +S
Sbjct: 614 NLEDEVNEHES 624
BLAST of PI0027733 vs. ExPASy TrEMBL
Match:
A0A5A7SHN8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1204G00400 PE=4 SV=1)
HSP 1 Score: 213.4 bits (542), Expect = 6.7e-52
Identity = 97/133 (72.93%), Postives = 109/133 (81.95%), Query Frame = 0
Query: 14 TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPS 73
TSYSPY+F RQFGFYQD+PNDIGG+ P T N L+HWRICTRR TLSELY+PA SLEP
Sbjct: 460 TSYSPYKFERQFGFYQDLPNDIGGMPPAITLDNILYHWRICTRRNTLSELYLPARSLEPC 519
Query: 74 KHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGSKQIRLIEAMAP 133
KHVT RF +WW TKH TYFEDNRHHLVSSAIPPPSQ +LPKNRG N+G K+IRL+EAMAP
Sbjct: 520 KHVTQRFTDWWTTKHGTYFEDNRHHLVSSAIPPPSQSRLPKNRGRNLGGKEIRLVEAMAP 579
Query: 134 IHDRGVKEQKSRA 147
+ VKE K +
Sbjct: 580 NLEEEVKEHKDES 592
BLAST of PI0027733 vs. ExPASy TrEMBL
Match:
A0A5A7UGA8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001090 PE=4 SV=1)
HSP 1 Score: 213.0 bits (541), Expect = 8.8e-52
Identity = 96/133 (72.18%), Postives = 108/133 (81.20%), Query Frame = 0
Query: 14 TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPS 73
TSY+PYRFGRQFGFYQD+PN IGG+ P N L+HWRICTRR TLSELY+PA SLEP
Sbjct: 76 TSYNPYRFGRQFGFYQDLPNYIGGMPPAIALNNILYHWRICTRRNTLSELYLPAHSLEPC 135
Query: 74 KHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGSKQIRLIEAMAP 133
KHVT RF +WW TKH TYFEDNRHHLVSS IPPPSQP+LPKNRGSN+G K+IRL+EAM P
Sbjct: 136 KHVTQRFIDWWTTKHGTYFEDNRHHLVSSVIPPPSQPRLPKNRGSNLGGKEIRLVEAMTP 195
Query: 134 IHDRGVKEQKSRA 147
+ VKE K +
Sbjct: 196 NLEEEVKEHKDES 208
BLAST of PI0027733 vs. ExPASy TrEMBL
Match:
E5GCB9 (PMD domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 209.9 bits (533), Expect = 7.4e-51
Identity = 96/133 (72.18%), Postives = 107/133 (80.45%), Query Frame = 0
Query: 14 TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPS 73
TSYSPYR GRQFGFYQD+PNDIGG+ P T N L+HWRICTRR TL ELY+P SLEP
Sbjct: 227 TSYSPYRLGRQFGFYQDLPNDIGGMPPAITLDNILYHWRICTRRYTLFELYLPVRSLEPC 286
Query: 74 KHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGSKQIRLIEAMAP 133
KHVT RF +WW TKH TYFEDNRHHLVSSAI PPSQP+LPKNRGSN+G K+I L+EAMAP
Sbjct: 287 KHVTQRFTDWWTTKHMTYFEDNRHHLVSSAISPPSQPRLPKNRGSNLGGKEIGLVEAMAP 346
Query: 134 IHDRGVKEQKSRA 147
+ VKE K +
Sbjct: 347 NLEEEVKEHKDES 359
BLAST of PI0027733 vs. NCBI nr
Match:
KAA0047478.1 (hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa])
HSP 1 Score: 221.9 bits (564), Expect = 3.9e-54
Identity = 101/133 (75.94%), Postives = 113/133 (84.96%), Query Frame = 0
Query: 14 TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPS 73
TSYSPYRFGRQFGFYQD+PNDIGG+SP T N L+HWRICTRR TLSELY+PA SLEP
Sbjct: 460 TSYSPYRFGRQFGFYQDLPNDIGGMSPAITLDNILYHWRICTRRNTLSELYLPARSLEPC 519
Query: 74 KHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGSKQIRLIEAMAP 133
KHVT RF +WW TKH TYFEDNRHHLVSSAIPP SQP+LPKNRGSN+G K+IRL+EAMAP
Sbjct: 520 KHVTQRFTDWWTTKHGTYFEDNRHHLVSSAIPPSSQPRLPKNRGSNLGGKEIRLVEAMAP 579
Query: 134 IHDRGVKEQKSRA 147
+ VKE+K +
Sbjct: 580 NLEEEVKERKDES 592
BLAST of PI0027733 vs. NCBI nr
Match:
KAA0053466.1 (hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa])
HSP 1 Score: 213.8 bits (543), Expect = 1.1e-51
Identity = 97/131 (74.05%), Postives = 108/131 (82.44%), Query Frame = 0
Query: 14 TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPS 73
TSYSPYRFGRQFGFYQD+PNDIGG+ P T N L+HWRIC RR TLSELY+P SLEP
Sbjct: 494 TSYSPYRFGRQFGFYQDLPNDIGGMPPAITLDNILYHWRICMRRNTLSELYLPVRSLEPC 553
Query: 74 KHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGSKQIRLIEAMAP 133
KHVT RF +WW TKH YFEDNRHHLVSSAIPPPSQP+LPKNRGSN+G K+IRL+EAMAP
Sbjct: 554 KHVTQRFTDWWTTKHMNYFEDNRHHLVSSAIPPPSQPRLPKNRGSNLGGKEIRLVEAMAP 613
Query: 134 IHDRGVKEQKS 145
+ V E +S
Sbjct: 614 NLEDEVNEHES 624
BLAST of PI0027733 vs. NCBI nr
Match:
KAA0025356.1 (hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa])
HSP 1 Score: 213.4 bits (542), Expect = 1.4e-51
Identity = 97/133 (72.93%), Postives = 109/133 (81.95%), Query Frame = 0
Query: 14 TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPS 73
TSYSPY+F RQFGFYQD+PNDIGG+ P T N L+HWRICTRR TLSELY+PA SLEP
Sbjct: 460 TSYSPYKFERQFGFYQDLPNDIGGMPPAITLDNILYHWRICTRRNTLSELYLPARSLEPC 519
Query: 74 KHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGSKQIRLIEAMAP 133
KHVT RF +WW TKH TYFEDNRHHLVSSAIPPPSQ +LPKNRG N+G K+IRL+EAMAP
Sbjct: 520 KHVTQRFTDWWTTKHGTYFEDNRHHLVSSAIPPPSQSRLPKNRGRNLGGKEIRLVEAMAP 579
Query: 134 IHDRGVKEQKSRA 147
+ VKE K +
Sbjct: 580 NLEEEVKEHKDES 592
BLAST of PI0027733 vs. NCBI nr
Match:
KAA0054204.1 (hypothetical protein E6C27_scaffold131G001410 [Cucumis melo var. makuwa] >TYK15059.1 hypothetical protein E5676_scaffold45G001090 [Cucumis melo var. makuwa])
HSP 1 Score: 213.0 bits (541), Expect = 1.8e-51
Identity = 96/133 (72.18%), Postives = 108/133 (81.20%), Query Frame = 0
Query: 14 TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPS 73
TSY+PYRFGRQFGFYQD+PN IGG+ P N L+HWRICTRR TLSELY+PA SLEP
Sbjct: 76 TSYNPYRFGRQFGFYQDLPNYIGGMPPAIALNNILYHWRICTRRNTLSELYLPAHSLEPC 135
Query: 74 KHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGSKQIRLIEAMAP 133
KHVT RF +WW TKH TYFEDNRHHLVSS IPPPSQP+LPKNRGSN+G K+IRL+EAM P
Sbjct: 136 KHVTQRFIDWWTTKHGTYFEDNRHHLVSSVIPPPSQPRLPKNRGSNLGGKEIRLVEAMTP 195
Query: 134 IHDRGVKEQKSRA 147
+ VKE K +
Sbjct: 196 NLEEEVKEHKDES 208
BLAST of PI0027733 vs. NCBI nr
Match:
ADN34118.1 (hypothetical protein [Cucumis melo subsp. melo])
HSP 1 Score: 209.9 bits (533), Expect = 1.5e-50
Identity = 96/133 (72.18%), Postives = 107/133 (80.45%), Query Frame = 0
Query: 14 TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPS 73
TSYSPYR GRQFGFYQD+PNDIGG+ P T N L+HWRICTRR TL ELY+P SLEP
Sbjct: 227 TSYSPYRLGRQFGFYQDLPNDIGGMPPAITLDNILYHWRICTRRYTLFELYLPVRSLEPC 286
Query: 74 KHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGSKQIRLIEAMAP 133
KHVT RF +WW TKH TYFEDNRHHLVSSAI PPSQP+LPKNRGSN+G K+I L+EAMAP
Sbjct: 287 KHVTQRFTDWWTTKHMTYFEDNRHHLVSSAISPPSQPRLPKNRGSNLGGKEIGLVEAMAP 346
Query: 134 IHDRGVKEQKSRA 147
+ VKE K +
Sbjct: 347 NLEEEVKEHKDES 359
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7TX42 | 1.9e-54 | 75.94 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7UGW6 | 5.2e-52 | 74.05 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5A7SHN8 | 6.7e-52 | 72.93 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5A7UGA8 | 8.8e-52 | 72.18 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
E5GCB9 | 7.4e-51 | 72.18 | PMD domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAA0047478.1 | 3.9e-54 | 75.94 | hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa] | [more] |
KAA0053466.1 | 1.1e-51 | 74.05 | hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa] | [more] |
KAA0025356.1 | 1.4e-51 | 72.93 | hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa] | [more] |
KAA0054204.1 | 1.8e-51 | 72.18 | hypothetical protein E6C27_scaffold131G001410 [Cucumis melo var. makuwa] >TYK150... | [more] |
ADN34118.1 | 1.5e-50 | 72.18 | hypothetical protein [Cucumis melo subsp. melo] | [more] |
Match Name | E-value | Identity | Description | |