PI0027554 (gene) Melon (PI 482460) v1

Overview


Name	PI0027554
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Transcription termination factor MTEF1
Location	chr06: 4898438 .. 4899767 (+)
RNA-Seq Expression	PI0027554
Synteny	PI0027554

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCTTCCTTCCTTTTCTTATTTTCTTTCTTCTCTCCGTCTCCCACTCCGTCGATCGCTGATGCTCTTCCGCCTCCCATTTTTCTTTTCTGTTCTCTCATACCTTCATCCTTTTCTGAGGCATTTGTAGTTTCTCCCATTCTTCTTCTCAACAAGGAACCAACAGGTCAGTCTTCCTTCTCCTCGCAGTGCTTACAGTCATGTCTAACTTGTTTCGCACAATCATTCTACTTAGATCTCTATCCTCAGTCTCTACTCACGGATTTTCCGGAAGTCCCTTGAAATCTCTCAGATACTTATCGACCTCTTCTGAGATTGCATCATCTCCGAAATCTGCCTCGTTGGCTTCTGATGTTGTTCAGCTCAAGAACAATCGGGATCGGAAGCCTGCAATTGCGTTTCTTGAGAATCAGGGTTTCTCTGAATCACAAATCTCTGACATTGGCACCAGGATGCCTCAAATTCTTTCTGCGAACCCCGAGAAAACCCTGTTGCCCAAATTGTTGTTTTTGCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATTAGTATGTTCTGTTCCTGGTGTTTTAAGAGGAAGTTTAGACAGACGAATTATTCCAGCCTTTGATTACATTCAATCCGTGCTTGGAACTGAGGAGAAGACTGTCGCGACCGTAAAACAATACGCGGGTATTCTCTCTTGCGATCATCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCACATATTTTAACTTGTCTTCAGCGGTATCCTATAATGTTCTCGAGAAGTTCCATCCGATTCAAGGAGACTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAAATGCAGTTTGTTGTAGCTGTTTATGCTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATATGTTTGGCTTTTAGAAGGCATCAATGGGTTATGACGCTTTCTGAGGATAAGATTAATAGTGCAATGGATTTTTTCGTCAACAAAATTGGATTCGAACCATCTTTCGTTGCTAGAAGACCAGTTTTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTTCTGCTGTCAAAGGGTTTGATTAAAAAAGACTTGAATTTGTTTATGCCTTCTGATAATCTTTTCATAGACAAATTCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTGGGAGTTGTATGAAGAGAAATTAATGGATTGTAGAAGATGAAACAGGTTTGATTTCCTTGAAATTTAAATATTTAAC

mRNA sequence

TTCCTTCCTTCCTTTTCTTATTTTCTTTCTTCTCTCCGTCTCCCACTCCGTCGATCGCTGATGCTCTTCCGCCTCCCATTTTTCTTTTCTGTTCTCTCATACCTTCATCCTTTTCTGAGGCATTTGTAGTTTCTCCCATTCTTCTTCTCAACAAGGAACCAACAGGTCAGTCTTCCTTCTCCTCGCAGTGCTTACAGTCATGTCTAACTTGTTTCGCACAATCATTCTACTTAGATCTCTATCCTCAGTCTCTACTCACGGATTTTCCGGAAGTCCCTTGAAATCTCTCAGATACTTATCGACCTCTTCTGAGATTGCATCATCTCCGAAATCTGCCTCGTTGGCTTCTGATGTTGTTCAGCTCAAGAACAATCGGGATCGGAAGCCTGCAATTGCGTTTCTTGAGAATCAGGGTTTCTCTGAATCACAAATCTCTGACATTGGCACCAGGATGCCTCAAATTCTTTCTGCGAACCCCGAGAAAACCCTGTTGCCCAAATTGTTGTTTTTGCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATTAGTATGTTCTGTTCCTGGTGTTTTAAGAGGAAGTTTAGACAGACGAATTATTCCAGCCTTTGATTACATTCAATCCGTGCTTGGAACTGAGGAGAAGACTGTCGCGACCGTAAAACAATACGCGGGTATTCTCTCTTGCGATCATCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCACATATTTTAACTTGTCTTCAGCGGTATCCTATAATGTTCTCGAGAAGTTCCATCCGATTCAAGGAGACTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAAATGCAGTTTGTTGTAGCTGTTTATGCTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATATGTTTGGCTTTTAGAAGGCATCAATGGGTTATGACGCTTTCTGAGGATAAGATTAATAGTGCAATGGATTTTTTCGTCAACAAAATTGGATTCGAACCATCTTTCGTTGCTAGAAGACCAGTTTTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTTCTGCTGTCAAAGGGTTTGATTAAAAAAGACTTGAATTTGTTTATGCCTTCTGATAATCTTTTCATAGACAAATTCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTGGGAGTTGTATGAAGAGAAATTAATGGATTGTAGAAGATGAAACAGGTTTGATTTCCTTGAAATTTAAATATTTAAC

Coding sequence (CDS)

ATGTCTAACTTGTTTCGCACAATCATTCTACTTAGATCTCTATCCTCAGTCTCTACTCACGGATTTTCCGGAAGTCCCTTGAAATCTCTCAGATACTTATCGACCTCTTCTGAGATTGCATCATCTCCGAAATCTGCCTCGTTGGCTTCTGATGTTGTTCAGCTCAAGAACAATCGGGATCGGAAGCCTGCAATTGCGTTTCTTGAGAATCAGGGTTTCTCTGAATCACAAATCTCTGACATTGGCACCAGGATGCCTCAAATTCTTTCTGCGAACCCCGAGAAAACCCTGTTGCCCAAATTGTTGTTTTTGCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATTAGTATGTTCTGTTCCTGGTGTTTTAAGAGGAAGTTTAGACAGACGAATTATTCCAGCCTTTGATTACATTCAATCCGTGCTTGGAACTGAGGAGAAGACTGTCGCGACCGTAAAACAATACGCGGGTATTCTCTCTTGCGATCATCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCACATATTTTAACTTGTCTTCAGCGGTATCCTATAATGTTCTCGAGAAGTTCCATCCGATTCAAGGAGACTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAAATGCAGTTTGTTGTAGCTGTTTATGCTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATATGTTTGGCTTTTAGAAGGCATCAATGGGTTATGACGCTTTCTGAGGATAAGATTAATAGTGCAATGGATTTTTTCGTCAACAAAATTGGATTCGAACCATCTTTCGTTGCTAGAAGACCAGTTTTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTTCTGCTGTCAAAGGGTTTGATTAAAAAAGACTTGAATTTGTTTATGCCTTCTGATAATCTTTTCATAGACAAATTCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTGGGAGTTGTATGAAGAGAAATTAATGGATTGTAGAAGATGA

Protein sequence

MSNLFRTIILLRSLSSVSTHGFSGSPLKSLRYLSTSSEIASSPKSASLASDVVQLKNNRDRKPAIAFLENQGFSESQISDIGTRMPQILSANPEKTLLPKLLFLQSKGLSSPEIVKLVCSVPGVLRGSLDRRIIPAFDYIQSVLGTEEKTVATVKQYAGILSCDHRISVGPNIEILKQIGVPDSHILTCLQRYPIMFSRSSIRFKETVERVTEMGFNPQQMQFVVAVYALRSMTKSTWDKKVEVYRKWGLSEEEICLAFRRHQWVMTLSEDKINSAMDFFVNKIGFEPSFVARRPVLLSLSLKKRILPRGYVYQVLLSKGLIKKDLNLFMPSDNLFIDKFINPHKEQIPGLWELYEEKLMDCRR

Homology

[Close]

BLAST of PI0027554 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.7e-05
Identity = 43/191 (22.51%), Postives = 86/191 (45.03%), Query Frame = 0


Query: 43  PKSASLASDVVQLKNNRDRKPAIAFLENQGFSESQISDIGTRMPQILSANPEKTLLPKLL 102
           P   S    ++ L+ +    P +  L + G +  +++   T+ P ILS + E+ L P L 
Sbjct: 60  PYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLA 119

Query: 103 FLQSKGLSSPEIVKLVCSVPGVLRGSLDRRIIPAFDYIQSVLGTEEKTVATVKQYAGIL- 162
           F Q+ G+   ++ K++   P ++  S+D ++     ++ S+   ++  +  V      L 
Sbjct: 120 FFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLM 179

Query: 163 --SCDHRISVGPNIEILK-QIGVPDSHILTCLQRYPIMFSRSSIR-FKETVERVTEMGFN 222
             S D R+   P  E LK  +G+ +  I + +  +P +  R   +  K   + + E GF 
Sbjct: 180 GYSVDKRLR--PTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFG 239

Query: 223 PQQMQFVVAVY 229
             Q+  +V  Y
Sbjct: 240 DSQIATMVTGY 248

[Close]

BLAST of PI0027554 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.1e-04
Identity = 29/136 (21.32%), Postives = 60/136 (44.12%), Query Frame = 0


Query: 62  KPAIAFLENQGFSESQISDIGTRMPQILSANPEKTLLPKLLFLQSKGLSSPEIVKLVCSV 121
           KP + +    G  +  +  I    P +   + EKT+ PK+ FLQ  G+ +  I  ++   
Sbjct: 389 KPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKF 448

Query: 122 PGVLRGSLDRRIIPAFDYIQSVLGTEEKTVA-TVKQYAGILSCDHRISVGPNIEILKQIG 181
           P +L  SL ++I P   ++ +  G  +K +   +     +L C     + PN+     +G
Sbjct: 449 PSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLG 508

Query: 182 VPDSHILTCLQRYPIM 197
           +    +   +  +P++
Sbjct: 509 IRFYQLGEMIADFPML 524

[Close]

BLAST of PI0027554 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 3.1e-04
Identity = 35/135 (25.93%), Postives = 67/135 (49.63%), Query Frame = 0


Query: 68  LENQGFSESQISDIGTRMPQILSANPEKTLLPKLLFLQSK-GLSSPEIVKLVCSVPGVLR 127
           L + G S   +  I    P +L+++PE  +LP L FL ++  +S  +I K +   P +L 
Sbjct: 72  LSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLI 131

Query: 128 GSLDRRIIPAFDYIQSVLGTEEKTVATVKQYAGILSCDHRISVGPNIEILKQ-IGVPDSH 187
            S+D ++ PA  ++++ LG   +   T +    ++S   R  + P IE L++ +G     
Sbjct: 132 SSVDYQLRPALTFLKT-LGFVGRDTITSRNTVLLVSNVERTLI-PKIEYLEEGLGFTREE 191

Query: 188 ILTCLQRYPIMFSRS 201
           +   + R P + + S
Sbjct: 192 VAKMVVRSPALLTYS 204

[Close]

BLAST of PI0027554 vs. ExPASy TrEMBL
Match: A0A5A7U7J7 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00730 PE=3 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 3.6e-144
Identity = 277/367 (75.48%), Postives = 305/367 (83.11%), Query Frame = 0


Query: 1   MSNLFRTIILLRSLSSVSTHGFSGSPLKSLRYLSTSSEIASSPKSASLASDVVQLKNNRD 60
           MSN+FR I+LLRS S V   GFS SPLKSLRYLSTSSEI SSP+SA LAS+ VQLKN   
Sbjct: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNK-- 60

Query: 61  RKPAIAFLENQGFSESQISDIGTRMPQILSANPEKTLLPKLLFLQSKGLSSPEIVKLVCS 120
           RK  IA L + GFSESQIS +  R PQILSANPEK LLPKLLF QSKGLSSPEI KLVCS
Sbjct: 61  RKAVIALLADHGFSESQISSLDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCS 120

Query: 121 VPGVLRGSLDRRIIPAFDYIQSVLGTEEKTVATVKQYAGILSCDHRISVGPNIEILKQIG 180
            P VL GSLD RIIPAFDYIQ+VLG+EEKT+A +K +  IL+ D RISVGPNIEILKQIG
Sbjct: 121 FPRVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIG 180

Query: 181 VPDSHILTCLQRYPIMFSRSSIRFKETVERVTEMGFNPQQMQFVVAVYALRSMTKSTWDK 240
           VPDS+IL   Q  P +FSR+SIRFKETVERVTEMGFNPQ++QF+VAV+ALR+MTKSTWDK
Sbjct: 181 VPDSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDK 240

Query: 241 KVEVYRKWGLSEEEICLAFRRHQWVMTLSEDKINSAMDFFVNKIGFEPSFVARRPVLLSL 300
           KVEVYRKWGLSEEEICLAF+RH W M +SEDKIN AMDFFVNKIG E SFVARRP L+SL
Sbjct: 241 KVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISL 300

Query: 301 SLKKRILPRGYVYQVLLSKGLIKKDLNL---FMPSDNLFIDKFINPHKEQIPGLWELYEE 360
           SLKKR+ PRGYVYQVLL KGLIKK  N+      S+N FIDKFINPHKE+IPGL E YE+
Sbjct: 301 SLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQ 360

Query: 361 KLMDCRR 365
           KLMD RR
Sbjct: 361 KLMDSRR 365

[Close]

BLAST of PI0027554 vs. ExPASy TrEMBL
Match: A0A1S4DSR4 (uncharacterized protein LOC103483819 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483819 PE=3 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 5.2e-143
Identity = 275/367 (74.93%), Postives = 309/367 (84.20%), Query Frame = 0


Query: 1   MSNLFRTIILLRSLSSVSTHGFSGSPLKSLRYLSTSSEIASSPKSASLASDVVQLKNNRD 60
           MSNLFR I+LLRS SSV +HGFS  PLKSLR+LSTSSEI SSPKSASLAS+VVQ+KNN  
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNN-- 60

Query: 61  RKPAIAFLENQGFSESQISDIGTRMPQILSANPEKTLLPKLLFLQSKGLSSPEIVKLVCS 120
           RK A +F EN GFSESQISDI  + PQILSANPEK LLPKLLF +SKGLSSPEI K+V S
Sbjct: 61  RKAAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYS 120

Query: 121 VPGVLRGSLDRRIIPAFDYIQSVLGTEEKTVATVKQYAGILSCDHRISVGPNIEILKQIG 180
            P VL GSL+ RIIPAFDYIQ+VLG+EEKT+  +K +AGIL+ D RISVGPNIEILKQIG
Sbjct: 121 FPYVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIG 180

Query: 181 VPDSHILTCLQRYPIMFSRSSIRFKETVERVTEMGFNPQQMQFVVAVYALRSMTKSTWDK 240
           VPDS+I   LQ  P +F  + IRFKETV+RVTEMGFNPQQ+QFVVAV+ LRS+TKSTWDK
Sbjct: 181 VPDSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDK 240

Query: 241 KVEVYRKWGLSEEEICLAFRRHQWVMTLSEDKINSAMDFFVNKIGFEPSFVARRPVLLSL 300
           KVEVYRKWGLSEEEICLAF+RH W M +SEDKIN  MDFFVNKIG E SFVA RPVL+SL
Sbjct: 241 KVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISL 300

Query: 301 SLKKRILPRGYVYQVLLSKGLIKK--DLNLFMP-SDNLFIDKFINPHKEQIPGLWELYEE 360
           SLKKRI PRGYVYQVLL+KGLIKK  D+ +F+  S+  FI+K I+PHKEQIPGL E YE+
Sbjct: 301 SLKKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQ 360

Query: 361 KLMDCRR 365
           KLMD RR
Sbjct: 361 KLMDSRR 365

[Close]

BLAST of PI0027554 vs. ExPASy TrEMBL
Match: A0A5A7U124 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00780 PE=3 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 8.8e-143
Identity = 277/368 (75.27%), Postives = 310/368 (84.24%), Query Frame = 0


Query: 1   MSNLFRTIILLRSLSSVSTHGFSGSPLKSLRYLSTSSEIASSPKSASLASDVVQLKNNRD 60
           MS LFR I+LLRS SSV +HGFS SPLKSLR+LSTSSEI SSPKSASLAS+ VQL+NN  
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENN-- 60

Query: 61  RKPAIAFLENQGFSESQISDIGTRMPQILSANPEKTLLPKLLFLQSKGLSSPEIVKLVCS 120
           RK  I  L N GFS+SQISDIG R PQIL+ANPEK LLPKLLF QSKGLSSPEI KLVC+
Sbjct: 61  RKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCT 120

Query: 121 VPGVLRGSLDRRIIPAFDYIQSVLGTEEKTVATVKQYAGILSCDHRISVGPNIEILKQIG 180
            P VL GSL++RII  FDYIQ+VLG+EEKT+A +KQ+AGIL+ D +ISVGPNIEILKQIG
Sbjct: 121 FPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIG 180

Query: 181 VPDSHILTCLQRYPIMFSRSSIRFKETVERVTEMGFNPQQMQFVVAVYALRSMTKSTWDK 240
           VPDS+IL  LQ  P +F  SSIRFKE VERVTEMGFNPQ++QF+VAV+ALR+MTKSTWDK
Sbjct: 181 VPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDK 240

Query: 241 KVEVYRKWGLSEEEICLAFRRHQWVMTLSEDKINSAMDFFVNKIGFEPSFVARRPVLLSL 300
           KVEVYRKWGLSEEEICLAF+RH W M +SEDKIN AMDFFVNKIG E SFVARRP L+SL
Sbjct: 241 KVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISL 300

Query: 301 SLKKRILPRGYVYQVLLSKGLIKKDLNL---FMPSDNLFIDKFINPHK-EQIPGLWELYE 360
           SLKKR+ PRGYVYQVLL KGLIKK  N+      S+  FI+KFINPHK EQIPGL ELY+
Sbjct: 301 SLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYK 360

Query: 361 EKLMDCRR 365
           +KLMD RR
Sbjct: 361 QKLMDSRR 366

[Close]

BLAST of PI0027554 vs. ExPASy TrEMBL
Match: A0A1S3AYM0 (uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=3 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 8.8e-143
Identity = 277/368 (75.27%), Postives = 310/368 (84.24%), Query Frame = 0


Query: 1   MSNLFRTIILLRSLSSVSTHGFSGSPLKSLRYLSTSSEIASSPKSASLASDVVQLKNNRD 60
           MS LFR I+LLRS SSV +HGFS SPLKSLR+LSTSSEI SSPKSASLAS+ VQL+NN  
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENN-- 60

Query: 61  RKPAIAFLENQGFSESQISDIGTRMPQILSANPEKTLLPKLLFLQSKGLSSPEIVKLVCS 120
           RK  I  L N GFS+SQISDIG R PQIL+ANPEK LLPKLLF QSKGLSSPEI KLVC+
Sbjct: 61  RKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCT 120

Query: 121 VPGVLRGSLDRRIIPAFDYIQSVLGTEEKTVATVKQYAGILSCDHRISVGPNIEILKQIG 180
            P VL GSL++RII  FDYIQ+VLG+EEKT+A +KQ+AGIL+ D +ISVGPNIEILKQIG
Sbjct: 121 FPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIG 180

Query: 181 VPDSHILTCLQRYPIMFSRSSIRFKETVERVTEMGFNPQQMQFVVAVYALRSMTKSTWDK 240
           VPDS+IL  LQ  P +F  SSIRFKE VERVTEMGFNPQ++QF+VAV+ALR+MTKSTWDK
Sbjct: 181 VPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDK 240

Query: 241 KVEVYRKWGLSEEEICLAFRRHQWVMTLSEDKINSAMDFFVNKIGFEPSFVARRPVLLSL 300
           KVEVYRKWGLSEEEICLAF+RH W M +SEDKIN AMDFFVNKIG E SFVARRP L+SL
Sbjct: 241 KVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISL 300

Query: 301 SLKKRILPRGYVYQVLLSKGLIKKDLNL---FMPSDNLFIDKFINPHK-EQIPGLWELYE 360
           SLKKR+ PRGYVYQVLL KGLIKK  N+      S+  FI+KFINPHK EQIPGL ELY+
Sbjct: 301 SLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYK 360

Query: 361 EKLMDCRR 365
           +KLMD RR
Sbjct: 361 QKLMDSRR 366

[Close]

BLAST of PI0027554 vs. ExPASy TrEMBL
Match: A0A5A7U2M1 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00920 PE=3 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.5e-142
Identity = 272/361 (75.35%), Postives = 309/361 (85.60%), Query Frame = 0


Query: 1   MSNLFRTIILLRSLSSVSTHGFSGSPLKSLRYLSTSSEIASSPKSASLASDVVQLKNNRD 60
           MS LFR I+LLRS SSV +HGFS  PLKSLR+LSTSSE+ SSPKSASLAS+ V LKNN  
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNN-- 60

Query: 61  RKPAIAFLENQGFSESQISDIGTRMPQILSANPEKTLLPKLLFLQSKGLSSPEIVKLVCS 120
           RK  IA L N GFS+SQISD+  R+PQI SANPE++LLPKLLFLQSKGLSSP+IVK VC+
Sbjct: 61  RKDVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCA 120

Query: 121 VPGVLRGSLDRRIIPAFDYIQSVLGTEEKTVATVKQYAGILSCDHRISVGPNIEILKQIG 180
            P VL GSL++RIIPAFDYIQ+VLGTEEK VA +K++AGIL+ D RISVGPNIEILKQIG
Sbjct: 121 FPCVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIG 180

Query: 181 VPDSHILTCLQRYPIMFSRSSIRFKETVERVTEMGFNPQQMQFVVAVYALRSMTKSTWDK 240
           VPDS+I T LQ+ P MF  SSIRFKE VERVTEMGFNP+++QF+VAV+ALRSMTKSTWDK
Sbjct: 181 VPDSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDK 240

Query: 241 KVEVYRKWGLSEEEICLAFRRHQWVMTLSEDKINSAMDFFVNKIGFEPSFVARRPVLLSL 300
           KVEVYRKWGLSEEEI LAFR++ W M  SEDKIN  MDFFVNKIG E   VARRPVL++L
Sbjct: 241 KVEVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIAL 300

Query: 301 SLKKRILPRGYVYQVLLSKGLIKKDLNLFMPSDNLFIDKFINPHKEQIPGLWELYEEKLM 360
           SLKKRILPRGY+YQVLLSKGLIK   +LF  S+N FI+KFINPHKEQIPGL +LY++KLM
Sbjct: 301 SLKKRILPRGYIYQVLLSKGLIKNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKLM 359

Query: 361 D 362
           D
Sbjct: 361 D 359

[Close]

BLAST of PI0027554 vs. NCBI nr
Match: KAA0049469.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16148.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 521.2 bits (1341), Expect = 7.4e-144
Identity = 277/367 (75.48%), Postives = 305/367 (83.11%), Query Frame = 0


Query: 1   MSNLFRTIILLRSLSSVSTHGFSGSPLKSLRYLSTSSEIASSPKSASLASDVVQLKNNRD 60
           MSN+FR I+LLRS S V   GFS SPLKSLRYLSTSSEI SSP+SA LAS+ VQLKN   
Sbjct: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNK-- 60

Query: 61  RKPAIAFLENQGFSESQISDIGTRMPQILSANPEKTLLPKLLFLQSKGLSSPEIVKLVCS 120
           RK  IA L + GFSESQIS +  R PQILSANPEK LLPKLLF QSKGLSSPEI KLVCS
Sbjct: 61  RKAVIALLADHGFSESQISSLDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCS 120

Query: 121 VPGVLRGSLDRRIIPAFDYIQSVLGTEEKTVATVKQYAGILSCDHRISVGPNIEILKQIG 180
            P VL GSLD RIIPAFDYIQ+VLG+EEKT+A +K +  IL+ D RISVGPNIEILKQIG
Sbjct: 121 FPRVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIG 180

Query: 181 VPDSHILTCLQRYPIMFSRSSIRFKETVERVTEMGFNPQQMQFVVAVYALRSMTKSTWDK 240
           VPDS+IL   Q  P +FSR+SIRFKETVERVTEMGFNPQ++QF+VAV+ALR+MTKSTWDK
Sbjct: 181 VPDSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDK 240

Query: 241 KVEVYRKWGLSEEEICLAFRRHQWVMTLSEDKINSAMDFFVNKIGFEPSFVARRPVLLSL 300
           KVEVYRKWGLSEEEICLAF+RH W M +SEDKIN AMDFFVNKIG E SFVARRP L+SL
Sbjct: 241 KVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISL 300

Query: 301 SLKKRILPRGYVYQVLLSKGLIKKDLNL---FMPSDNLFIDKFINPHKEQIPGLWELYEE 360
           SLKKR+ PRGYVYQVLL KGLIKK  N+      S+N FIDKFINPHKE+IPGL E YE+
Sbjct: 301 SLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQ 360

Query: 361 KLMDCRR 365
           KLMD RR
Sbjct: 361 KLMDSRR 365

[Close]

BLAST of PI0027554 vs. NCBI nr
Match: XP_016899003.1 (PREDICTED: uncharacterized protein LOC103483819 isoform X3 [Cucumis melo] >XP_016899004.1 PREDICTED: uncharacterized protein LOC103483819 isoform X3 [Cucumis melo] >XP_016899005.1 PREDICTED: uncharacterized protein LOC103483819 isoform X3 [Cucumis melo])

HSP 1 Score: 517.3 bits (1331), Expect = 1.1e-142
Identity = 275/367 (74.93%), Postives = 309/367 (84.20%), Query Frame = 0


Query: 1   MSNLFRTIILLRSLSSVSTHGFSGSPLKSLRYLSTSSEIASSPKSASLASDVVQLKNNRD 60
           MSNLFR I+LLRS SSV +HGFS  PLKSLR+LSTSSEI SSPKSASLAS+VVQ+KNN  
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNN-- 60

Query: 61  RKPAIAFLENQGFSESQISDIGTRMPQILSANPEKTLLPKLLFLQSKGLSSPEIVKLVCS 120
           RK A +F EN GFSESQISDI  + PQILSANPEK LLPKLLF +SKGLSSPEI K+V S
Sbjct: 61  RKAAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYS 120

Query: 121 VPGVLRGSLDRRIIPAFDYIQSVLGTEEKTVATVKQYAGILSCDHRISVGPNIEILKQIG 180
            P VL GSL+ RIIPAFDYIQ+VLG+EEKT+  +K +AGIL+ D RISVGPNIEILKQIG
Sbjct: 121 FPYVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIG 180

Query: 181 VPDSHILTCLQRYPIMFSRSSIRFKETVERVTEMGFNPQQMQFVVAVYALRSMTKSTWDK 240
           VPDS+I   LQ  P +F  + IRFKETV+RVTEMGFNPQQ+QFVVAV+ LRS+TKSTWDK
Sbjct: 181 VPDSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDK 240

Query: 241 KVEVYRKWGLSEEEICLAFRRHQWVMTLSEDKINSAMDFFVNKIGFEPSFVARRPVLLSL 300
           KVEVYRKWGLSEEEICLAF+RH W M +SEDKIN  MDFFVNKIG E SFVA RPVL+SL
Sbjct: 241 KVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISL 300

Query: 301 SLKKRILPRGYVYQVLLSKGLIKK--DLNLFMP-SDNLFIDKFINPHKEQIPGLWELYEE 360
           SLKKRI PRGYVYQVLL+KGLIKK  D+ +F+  S+  FI+K I+PHKEQIPGL E YE+
Sbjct: 301 SLKKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQ 360

Query: 361 KLMDCRR 365
           KLMD RR
Sbjct: 361 KLMDSRR 365

[Close]

BLAST of PI0027554 vs. NCBI nr
Match: XP_008439382.1 (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo] >KAA0049472.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16151.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 516.5 bits (1329), Expect = 1.8e-142
Identity = 277/368 (75.27%), Postives = 310/368 (84.24%), Query Frame = 0


Query: 1   MSNLFRTIILLRSLSSVSTHGFSGSPLKSLRYLSTSSEIASSPKSASLASDVVQLKNNRD 60
           MS LFR I+LLRS SSV +HGFS SPLKSLR+LSTSSEI SSPKSASLAS+ VQL+NN  
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENN-- 60

Query: 61  RKPAIAFLENQGFSESQISDIGTRMPQILSANPEKTLLPKLLFLQSKGLSSPEIVKLVCS 120
           RK  I  L N GFS+SQISDIG R PQIL+ANPEK LLPKLLF QSKGLSSPEI KLVC+
Sbjct: 61  RKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCT 120

Query: 121 VPGVLRGSLDRRIIPAFDYIQSVLGTEEKTVATVKQYAGILSCDHRISVGPNIEILKQIG 180
            P VL GSL++RII  FDYIQ+VLG+EEKT+A +KQ+AGIL+ D +ISVGPNIEILKQIG
Sbjct: 121 FPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIG 180

Query: 181 VPDSHILTCLQRYPIMFSRSSIRFKETVERVTEMGFNPQQMQFVVAVYALRSMTKSTWDK 240
           VPDS+IL  LQ  P +F  SSIRFKE VERVTEMGFNPQ++QF+VAV+ALR+MTKSTWDK
Sbjct: 181 VPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDK 240

Query: 241 KVEVYRKWGLSEEEICLAFRRHQWVMTLSEDKINSAMDFFVNKIGFEPSFVARRPVLLSL 300
           KVEVYRKWGLSEEEICLAF+RH W M +SEDKIN AMDFFVNKIG E SFVARRP L+SL
Sbjct: 241 KVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISL 300

Query: 301 SLKKRILPRGYVYQVLLSKGLIKKDLNL---FMPSDNLFIDKFINPHK-EQIPGLWELYE 360
           SLKKR+ PRGYVYQVLL KGLIKK  N+      S+  FI+KFINPHK EQIPGL ELY+
Sbjct: 301 SLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYK 360

Query: 361 EKLMDCRR 365
           +KLMD RR
Sbjct: 361 QKLMDSRR 366

[Close]

BLAST of PI0027554 vs. NCBI nr
Match: KAA0049484.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16164.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 515.8 bits (1327), Expect = 3.1e-142
Identity = 272/361 (75.35%), Postives = 309/361 (85.60%), Query Frame = 0


Query: 1   MSNLFRTIILLRSLSSVSTHGFSGSPLKSLRYLSTSSEIASSPKSASLASDVVQLKNNRD 60
           MS LFR I+LLRS SSV +HGFS  PLKSLR+LSTSSE+ SSPKSASLAS+ V LKNN  
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNN-- 60

Query: 61  RKPAIAFLENQGFSESQISDIGTRMPQILSANPEKTLLPKLLFLQSKGLSSPEIVKLVCS 120
           RK  IA L N GFS+SQISD+  R+PQI SANPE++LLPKLLFLQSKGLSSP+IVK VC+
Sbjct: 61  RKDVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCA 120

Query: 121 VPGVLRGSLDRRIIPAFDYIQSVLGTEEKTVATVKQYAGILSCDHRISVGPNIEILKQIG 180
            P VL GSL++RIIPAFDYIQ+VLGTEEK VA +K++AGIL+ D RISVGPNIEILKQIG
Sbjct: 121 FPCVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIG 180

Query: 181 VPDSHILTCLQRYPIMFSRSSIRFKETVERVTEMGFNPQQMQFVVAVYALRSMTKSTWDK 240
           VPDS+I T LQ+ P MF  SSIRFKE VERVTEMGFNP+++QF+VAV+ALRSMTKSTWDK
Sbjct: 181 VPDSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDK 240

Query: 241 KVEVYRKWGLSEEEICLAFRRHQWVMTLSEDKINSAMDFFVNKIGFEPSFVARRPVLLSL 300
           KVEVYRKWGLSEEEI LAFR++ W M  SEDKIN  MDFFVNKIG E   VARRPVL++L
Sbjct: 241 KVEVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIAL 300

Query: 301 SLKKRILPRGYVYQVLLSKGLIKKDLNLFMPSDNLFIDKFINPHKEQIPGLWELYEEKLM 360
           SLKKRILPRGY+YQVLLSKGLIK   +LF  S+N FI+KFINPHKEQIPGL +LY++KLM
Sbjct: 301 SLKKRILPRGYIYQVLLSKGLIKNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKLM 359

Query: 361 D 362
           D
Sbjct: 361 D 359

[Close]

BLAST of PI0027554 vs. NCBI nr
Match: KAA0049463.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16142.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 507.3 bits (1305), Expect = 1.1e-139
Identity = 272/357 (76.19%), Postives = 297/357 (83.19%), Query Frame = 0


Query: 1   MSNLFRTIILLRSLSSVSTHGFSGSPLKSLRYLSTSSEIASSPKSASLASDVVQLKNNRD 60
           M NLFR  ILLR  SSV +HGFS  PLKSLRYLSTSS+I SSP SA LAS+ +Q KN   
Sbjct: 1   MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNK-- 60

Query: 61  RKPAIAFLENQGFSESQISDIGTRMPQILSANPEKTLLPKLLFLQSKGLSSPEIVKLVCS 120
           RK  IA L + GFSESQISD+  R PQILSANPEK+LLPKLLF QSKGLSSPEIVKLVCS
Sbjct: 61  RKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCS 120

Query: 121 VPGVLRGSLDRRIIPAFDYIQSVLGTEEKTVATVKQYAGILSCDHRISVGPNIEILKQIG 180
            P VL GSLD+RIIPAFDYIQ+VLG+EEKT+A++KQ+AGIL  D RIS GPNIEILKQIG
Sbjct: 121 FPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIG 180

Query: 181 VPDSHILTCLQRYPIMFSRSSIRFKETVERVTEMGFNPQQMQFVVAVYALRSMTKSTWDK 240
           VPDS+I   LQ  P +F  + +RFKETVERVTEMGFNPQQ+QFVVAV+ LR+MTKSTWDK
Sbjct: 181 VPDSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDK 240

Query: 241 KVEVYRKWGLSEEEICLAFRRHQWVMTLSEDKINSAMDFFVNKIGFEPSFVARRPVLLSL 300
           KVEVYRKWGLSEEEI LAFRRH W M  SEDKIN AMDFFVNK+G E SF ARRP+LLSL
Sbjct: 241 KVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSL 300

Query: 301 SLKKRILPRGYVYQVLLSKGLIKKDLNL---FMPSDNLFIDKFINPHKEQIPGLWEL 355
           SLKKRILPRGYVYQVLLSKGLIKK  NL   F  S+N FI+KFINPHKEQIPGL EL
Sbjct: 301 SLKKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLEL 355

[Close]

BLAST of PI0027554 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 226.9 bits (577), Expect = 2.7e-59
Identity = 125/331 (37.76%), Postives = 202/331 (61.03%), Query Frame = 0


Query: 29  SLRYLSTSSEIASSPKSASLASDVVQLKNNRDRKPAIAFLENQGFSESQISDIGTRMPQI 88
           +L YL  S  +  SP SA++AS  + L +       +  L + GF+ +QIS +  + P +
Sbjct: 71  TLNYLIDSCGL--SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 89  LSANPEKTLLPKLLFLQSKGLSSPEIVKLVCSVPGVLRGSLDRRIIPAFDYIQSVLGTEE 148
           L AN E  LLPKL F  S G+S   + + + S P +L  SL  ++IP++++++SVL ++E
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 149 KTVATVKQYAGILSCDHRISVGPNIEILKQIGVPDSHILTCLQRYPIMFSRSSIRFKETV 208
           K VA +++   +   DH  ++ PNI  + + GVP+  I   L  +P    + +  F+   
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 209 ERVTEMGFNPQQMQFVVAVYALRSM-TKSTWDKKVEVYRKWGLSEEEICLAFRRHQWVMT 268
           ++  EMGFNPQ+  FV+A++AL     KS WDK  EVY++WG SE++I  AF++H   M 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 269 LSEDKINSAMDFFVNKIGFEPSFVARRPVLLSLSLKKRILPRGYVYQVLLSKGLIKKD-- 328
           LSE KIN  M++FVN++   P  +A+ PV+L  SL+KRI+PR  V +VL+S GL+K+D  
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 329 -LNLFMPSDNLFIDKFINPHKEQIPGLWELY 356
             +L +P + +F++K +  ++E++P L  LY
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of PI0027554 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 189.1 bits (479), Expect = 6.2e-48
Identity = 107/314 (34.08%), Postives = 180/314 (57.32%), Query Frame = 0


Query: 42  SPKSASLASDVVQLKNNRDRKPAIAFLENQGFSESQISDIGTRMPQILSANPEKTLLPKL 101
           S +SA   S  V+L +++     +A  ++ GF+  QI+ +    P++LS +PE  + PKL
Sbjct: 69  SLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKL 128

Query: 102 LFLQSKGLSSPEIVKLVCSVPGVLRGSLDRRIIPAFDYIQSVLGTEEKTVATVKQYAGIL 161
           +F  S G S+ +  K++ S P +L  SL +R+IP +D ++S+L  EE  V  +K+     
Sbjct: 129 MFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCF 188

Query: 162 SCDHRISVGPNIEILKQIGVPDSHILTCLQRYPIMFSRSSIRFKETVERVTEMGFNPQQM 221
           S      V   + I +++GVPD  I   +Q  P  F     RF E + RV   GF+P++ 
Sbjct: 189 SLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKA 248

Query: 222 QFVVAVYALRSMTKSTWDKKVEVYRKWGLSEEEICLAFRRHQWVMTLSEDKINSAMDFFV 281
            FV A+ A    ++S  ++K ++++ +G S+E+   A  R    +T+S++KI   +++ V
Sbjct: 249 GFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLV 308

Query: 282 NKIGFEPSFVARRPVLLSLSLKKRILPRGYVYQVLLSKGLIKK-DLNLF---MPSDNLFI 341
           N IG +   +  RPV+LSLS++KRI PR  V  +LLSKGL+KK D+N F       + F+
Sbjct: 309 NNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFM 368

Query: 342 DKFINPHKEQIPGL 352
           DKF+  +++++P L
Sbjct: 369 DKFVLKYQDEMPQL 382

[Close]

BLAST of PI0027554 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 150.6 bits (379), Expect = 2.4e-36
Identity = 89/308 (28.90%), Postives = 167/308 (54.22%), Query Frame = 0


Query: 43  PKSASLASDVVQLKNNRDRKPAIAFLENQGFSESQISDIGTRMPQILSANPEKTLLPKLL 102
           P + ++A     LK+    +  I  L++  FS++QI       P+++  N EK L PKL 
Sbjct: 53  PLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLR 112

Query: 103 FLQSKGLSSPEIVKLVCSVPGVLRGSLDRRIIPAFDYIQSVLGTEEKTVATVKQYAG--I 162
           F +  G +   + K V     V+  SL +++IP  + ++S++  + + +  +    G  +
Sbjct: 113 FFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLL 172

Query: 163 LSCDHRISVGPNIEILKQIGVPDSHILTCLQRYPIMFSRSSIRFKETVERVTEMGFNPQQ 222
           LS D  + + PNI  L+  G+  S + + L+R P +F+ S  + +  V R  ++GF    
Sbjct: 173 LSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNS 232

Query: 223 MQFVVAVYALRSMTKSTWDKKVEVYRKWGLSEEEICLAFRRHQWVMTLSEDKINSAMDFF 282
              V AV +L S+++ T+D+KV+++   G SE+EI    RR   ++  SEDK+    +F+
Sbjct: 233 RMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFY 292

Query: 283 VNKIGFEPSFVARRPVLLSLSLKKRILPRGYVYQVLLSKGLIKKD-------LNLFMPSD 342
           + ++G E   +A+RP +LS +L+KR++PR  V Q+L  KGL+ K+       + +   ++
Sbjct: 293 LKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTE 352

[Close]

BLAST of PI0027554 vs. TAIR 10
Match: AT1G61980.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 134.8 bits (338), Expect = 1.4e-31
Identity = 104/381 (27.30%), Postives = 182/381 (47.77%), Query Frame = 0


Query: 10  LLRSLSSVSTHGFS---GSPLKSLRYLSTSSEIASSPKSASLASDVVQLKNNRDRKPAIA 69
           L  S SS S    S   G   KS         +    K A   S  V  ++  +    + 
Sbjct: 30  LSNSFSSASAARLSPRVGRKGKSFTVSYLVDSLGLPKKLAESVSRKVSFEDKDNPDSVLN 89

Query: 70  FLENQGFSESQISDIGTRMPQILSANPEKTLLPKLLFLQSKGLSSPEIVKLVCSVPGVLR 129
            L + GF++SQIS I T  PQ+L A+ EK+L PKL FLQS+G SS E+ ++V +VP +L 
Sbjct: 90  LLRSHGFTDSQISTIVTDYPQLLVADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILG 149

Query: 130 GSLDRRIIPAFDYIQSVLGTEEKTVATVKQYAGILSCDHRISVGPNIEILKQIGVPDSHI 189
               + I   +D+I+  L  +        Q     + +++I    N+ +L+++G+P   +
Sbjct: 150 KRGHKTISVFYDFIKETLLDKSSKSEKSCQPFPQGNLENKIR---NLSVLRELGMPHKLL 209

Query: 190 LTCLQRYPI-MFSRSSIRFKETVERVTEMGFNPQQMQFVVAVYALRSMTKSTWDKKVEVY 249
              L    + +F +   +F+E++++V EMGF+P   +FV A+  ++ ++    + KV  Y
Sbjct: 210 FPLLISCDVPVFGKE--KFEESLKKVVEMGFDPSTSKFVEALCVVQRLSDKNIEDKVNAY 269

Query: 250 RKWGLSEEEICLAFRRHQWVMTLSEDKINSAM---------------------------- 309
           ++ G   E +   F+R    +T SE KI + +                            
Sbjct: 270 KRLGFDVEYVWTVFKRWPNFLTHSEKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSA 329

Query: 310 -------DFFVNKIGFEPSFVARRPVLLSLSLKKRILPRGYVYQVLLSKGLIKKDL---- 348
                  +F V K+ +    +   P +L  SL+KR +PRG V Q L+SKGLI  +L    
Sbjct: 330 EMVKKKTEFLVKKMNWPLKALVSNPAVLGYSLEKRTVPRGNVVQALISKGLIGSELPSIS 389

[Close]

BLAST of PI0027554 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 132.1 bits (331), Expect = 9.0e-31
Identity = 102/359 (28.41%), Postives = 177/359 (49.30%), Query Frame = 0


Query: 44  KSASLASDVVQLKNNRDRKPAIAFLENQGFSESQISDIGTRMPQILSANPEKTLLPKLLF 103
           K A   S  V  ++  +    +  L + GF+ SQIS I    PQ+L A+ EK+L PKL F
Sbjct: 67  KLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQF 126

Query: 104 LQSKGLSSPEIVKLVCSVPGVLRGSLDRRIIPAFDYIQSVL----GTEEKTVATVKQYAG 163
           LQS+G SS EI ++V SVP +L     + I   +D+I+  L       EK   ++ Q   
Sbjct: 127 LQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQG-- 186

Query: 164 ILSCDHRISVGPNIEILKQIGVPDSHILTCL--QRYPIMFSRSSIRFKETVERVTEMGFN 223
             + +++I    N+ +L+++G+P   + + L     P+       +F+ET+++V EMGF+
Sbjct: 187 --NLENKIR---NVSVLRELGMPHKLLFSLLISDSQPVC---GKEKFEETLKKVVEMGFD 246

Query: 224 PQQMQFVVAVYALRSMTKSTWDKKVEVY--------------RKWGLS------------ 283
           P   +FV A+  +  M + T ++KV +Y              +KW +S            
Sbjct: 247 PTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSI 306

Query: 284 EEEICLAFRRHQWV---------MTLSEDKINSAMDFFVNKIGFEPSFVARRPVLLSLSL 343
           E  + L F R ++          + LS + +    +F V K+ +    V   P +   SL
Sbjct: 307 ETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSL 366

Query: 344 KKRILPRGYVYQVLLSKGLIKKDLN----LFMPSDNLFIDKFINPH--KEQIPGLWELY 356
           +KRI+PRG V + L+SKGL++ +L     + M +  +F+++++  H  K+ +  L  +Y
Sbjct: 367 EKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIY 415

The following BLAST results are available for this feature:

BLAST of PI0027554 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL6	1.7e-05	22.51	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
F4IHL3	1.1e-04	21.32	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q84X53	3.1e-04	25.93	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]

BLAST of PI0027554 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U7J7	3.6e-144	75.48	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4DSR4	5.2e-143	74.93	uncharacterized protein LOC103483819 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7U124	8.8e-143	75.27	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3AYM0	8.8e-143	75.27	uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=...	[more]
A0A5A7U2M1	1.5e-142	75.35	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of PI0027554 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049469.1	7.4e-144	75.48	transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16148.1 tr...	[more]
XP_016899003.1	1.1e-142	74.93	PREDICTED: uncharacterized protein LOC103483819 isoform X3 [Cucumis melo] >XP_01...	[more]
XP_008439382.1	1.8e-142	75.27	PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo] >KAA0049472.1 tra...	[more]
KAA0049484.1	3.1e-142	75.35	transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16164.1 tr...	[more]
KAA0049463.1	1.1e-139	76.19	transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16142.1 tr...	[more]

BLAST of PI0027554 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	2.7e-59	37.76	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	6.2e-48	34.08	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	2.4e-36	28.90	Mitochondrial transcription termination factor family protein	[more]
AT1G61980.1	1.4e-31	27.30	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	9.0e-31	28.41	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 151..182 e-value: 190.0 score: 9.5 coord: 115..147 e-value: 100.0 score: 11.6 coord: 288..322 e-value: 0.6 score: 19.1 coord: 256..287 e-value: 2.8 score: 16.9 coord: 79..110 e-value: 0.0014 score: 27.9 coord: 187..217 e-value: 140.0 score: 10.5
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 66..190 e-value: 2.5E-18 score: 66.1 coord: 172..323 e-value: 1.0E-19 score: 70.6
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 37..361
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 146..349 e-value: 4.1E-42 score: 146.2
None	No IPR available	PANTHER	PTHR13068:SF160	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 37..361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0027554.1	PI0027554.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding