PI0027508 (gene) Melon (PI 482460) v1

Overview


Name	PI0027508
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein RADIALIS-like 1
Location	chr01: 6162219 .. 6163174 (-)
RNA-Seq Expression	PI0027508
Synteny	PI0027508

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTAACCCTTTAATTATTATTACTTTTTCTTCCCCTTCACTTCAAACCCTTTTAAGGCTTCCTTTTTATTTTGTCAATGGCTTCCATGACTGCTCGTGGACCAAGCACTACATGGACTACAAAGCAAAACAAAGCATTTGAGAAAGCTTTGGCAGTTTATGATAAAGACACACCTGAGAGATGGTTGAATGTTGCGAAGGCCATTGGTGGGAAAACTGAAGAAGAAGTGAAAAAGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAGTCTGGTGAAATTCCTTTTCCTTATGGAAGCTCTACGTGATCAAGTTATTAAGCGTTGATGGAACAAGGTAATATACATTGTTAAATCACTCCTGAACTCAAAAGTTTTTTTACAAAAAAAATAAAATAAAATAGAAAGATAGAATTGAATTTAAAAGTTGGAGGTGATGGGTTACGATAAATTTAGCCTTTTGGAGTTAAATATTGATATTGAGTATGTTGTGAGGTTCCTTTCCCATATACAAGCTCAAGATGATAGAAGTAATATATGTATAGAAGTGACAAAGTTGGCGTATACCAATTAGTCTAGTATTTAATTAAATTTAGGGTTGGTTTACATTAATTTACTTTTCAAGAGCTTAAAAAGTGCTACATTTTAGAAAGTTATTCCATGCAAGTTCATAATCACGTTTTTATGCTATTATGCTTTGAAATTCTCTCTTTCTATTTTTTTTTCTCTATAACGTTTCACTTTCTGATCTAAAATGTTAGAATTTGTATATAGTAATTATATATAATATCAAATGAAGCATTTTATTGTTCATACATATTTATCATTAACTGAATTTAACACAATATTTCTCATTTTTCCTTTGTTTTTCTCAGGAAGTTGGATTGAGCCAGCTCCTTCAGTGTTTGAAGAATAGAAGGAGGAAAAAACCATATTATGTTTGTCTTTTTT

mRNA sequence

CTCTAACCCTTTAATTATTATTACTTTTTCTTCCCCTTCACTTCAAACCCTTTTAAGGCTTCCTTTTTATTTTGTCAATGGCTTCCATGACTGCTCGTGGACCAAGCACTACATGGACTACAAAGCAAAACAAAGCATTTGAGAAAGCTTTGGCAGTTTATGATAAAGACACACCTGAGAGATGGTTGAATGTTGCGAAGGCCATTGGTGGGAAAACTGAAGAAGAAGTGAAAAAGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAGTCTGGAAGTTGGATTGAGCCAGCTCCTTCAGTGTTTGAAGAATAGAAGGAGGAAAAAACCATATTATGTTTGTCTTTTTT

Coding sequence (CDS)

ATGGCTTCCATGACTGCTCGTGGACCAAGCACTACATGGACTACAAAGCAAAACAAAGCATTTGAGAAAGCTTTGGCAGTTTATGATAAAGACACACCTGAGAGATGGTTGAATGTTGCGAAGGCCATTGGTGGGAAAACTGAAGAAGAAGTGAAAAAGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAGTCTGGAAGTTGGATTGAGCCAGCTCCTTCAGTGTTTGAAGAATAG

Protein sequence

MASMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVEDVKHIESGSWIEPAPSVFEE

Homology

[Close]

BLAST of PI0027508 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.4e-20
Identity = 43/64 (67.19%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 5  TARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVEDVKH 64
          + RG    W+ K+NKAFE+ALAVYDKDTP+RW NVA+A+ G+T EEVKKHY++LVED+K+
Sbjct: 3  STRGSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKY 62

Query: 65 IESG 69
          IESG
Sbjct: 63 IESG 66

[Close]

BLAST of PI0027508 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.9e-18
Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 1  MASMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVE 60
          MAS  +R   + WT  QNK FE+ALAVYDKDTP+RW NVAKA+GGKT EEVK+HY +LVE
Sbjct: 1  MAS-NSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVE 60

Query: 61 DVKHIESGSWIEPAPSVFE 80
          D+ +IE+G    P    FE
Sbjct: 61 DLINIETGRVPLPNYKTFE 78

[Close]

BLAST of PI0027508 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.4e-18
Identity = 43/67 (64.18%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 2  ASMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVED 61
          +SM+++  S +WT KQNKAFE+ALA YD+DTP RW NVAK +GGKT EEVK+HY+LLV+D
Sbjct: 4  SSMSSQS-SGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQD 63

Query: 62 VKHIESG 69
          +  IE+G
Sbjct: 64 INSIENG 69

[Close]

BLAST of PI0027508 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 7.1e-18
Identity = 39/64 (60.94%), Postives = 52/64 (81.25%), Query Frame = 0


Query: 10 STTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVEDVKHIESGS 69
          S +WT K+NK FE+ALA YD+DTP+RW NVA+A+GGK+ EEV++HY+LL+ DV  IESG 
Sbjct: 9  SASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIESGR 68

Query: 70 WIEP 74
          +  P
Sbjct: 69 YPHP 72

[Close]

BLAST of PI0027508 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 9.3e-18
Identity = 43/66 (65.15%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 3  SMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVEDV 62
          SM++ G S +WT KQNKAFE+ALAVYD+DTP+RW NVA+A+GGKT EE K+ Y LLV D+
Sbjct: 5  SMSSYG-SGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 64

Query: 63 KHIESG 69
          + IE+G
Sbjct: 65 ESIENG 69

[Close]

BLAST of PI0027508 vs. ExPASy TrEMBL
Match: A0A0A0K3K5 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G169590 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.8e-33
Identity = 74/80 (92.50%), Postives = 74/80 (92.50%), Query Frame = 0


Query: 1  MASMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVE 60
          MASMTA GPSTTWT  QNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVK HYQLLVE
Sbjct: 1  MASMTAHGPSTTWTINQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKSHYQLLVE 60

Query: 61 DVKHIESGSWIEPAPSVFEE 81
          DVKHIESG  IEPAPSVFEE
Sbjct: 61 DVKHIESGRLIEPAPSVFEE 80

[Close]

BLAST of PI0027508 vs. ExPASy TrEMBL
Match: A0A5A7T3V4 (Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold214G00070 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.0e-27
Identity = 64/68 (94.12%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MASMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVE 60
          MASMTA GPST WT KQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVK+HYQLLVE
Sbjct: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVKHIESG 69
          DVKHIESG
Sbjct: 61 DVKHIESG 68

[Close]

BLAST of PI0027508 vs. ExPASy TrEMBL
Match: A0A1S3BGF6 (protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.6e-23
Identity = 58/68 (85.29%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 1  MASMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVE 60
          MASM+A G S  WT KQNKAFEKALA+YDKDTP+RWLNVAKAIGGKTEEEVK+HYQLL+E
Sbjct: 1  MASMSAHG-SGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLE 60

Query: 61 DVKHIESG 69
          DVKHIESG
Sbjct: 61 DVKHIESG 67

[Close]

BLAST of PI0027508 vs. ExPASy TrEMBL
Match: A0A2P5EKH9 (Octamer-binding transcription factor OS=Trema orientale OX=63057 GN=TorRG33x02_182340 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.4e-23
Identity = 54/67 (80.60%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 2  ASMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVED 61
          +SM++RG S +WT KQNKAFEKALAVYDKDTP+RW NVAKA+GGKT EEVK+HY+LLVED
Sbjct: 4  SSMSSRGSSASWTAKQNKAFEKALAVYDKDTPDRWYNVAKAVGGKTPEEVKRHYELLVED 63

Query: 62 VKHIESG 69
          VKHIESG
Sbjct: 64 VKHIESG 70

[Close]

BLAST of PI0027508 vs. ExPASy TrEMBL
Match: A0A6J1GKK4 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454836 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.4e-23
Identity = 56/68 (82.35%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 1  MASMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVE 60
          MASM+A G + +WT KQNKAFEKALAVYD+DTPERWLNVAKAIGGKTEEEVK+HYQLL++
Sbjct: 1  MASMSAHGSAGSWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLLK 60

Query: 61 DVKHIESG 69
          DVK IESG
Sbjct: 61 DVKQIESG 68

[Close]

BLAST of PI0027508 vs. NCBI nr
Match: KAA0036165.1 (protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK19711.1 protein RADIALIS-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 132.1 bits (331), Expect = 2.1e-27
Identity = 64/68 (94.12%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MASMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVE 60
          MASMTA GPST WT KQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVK+HYQLLVE
Sbjct: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVKHIESG 69
          DVKHIESG
Sbjct: 61 DVKHIESG 68

[Close]

BLAST of PI0027508 vs. NCBI nr
Match: KAE8645640.1 (hypothetical protein Csa_020521 [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 3.6e-27
Identity = 64/68 (94.12%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 1  MASMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVE 60
          MASMTA GPSTTWT  QNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVK HYQLLVE
Sbjct: 1  MASMTAHGPSTTWTINQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKSHYQLLVE 60

Query: 61 DVKHIESG 69
          DVKHIESG
Sbjct: 61 DVKHIESG 68

[Close]

BLAST of PI0027508 vs. NCBI nr
Match: XP_008447025.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 5.4e-23
Identity = 58/68 (85.29%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 1  MASMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVE 60
          MASM+A G S  WT KQNKAFEKALA+YDKDTP+RWLNVAKAIGGKTEEEVK+HYQLL+E
Sbjct: 1  MASMSAHG-SGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLE 60

Query: 61 DVKHIESG 69
          DVKHIESG
Sbjct: 61 DVKHIESG 67

[Close]

BLAST of PI0027508 vs. NCBI nr
Match: XP_022952074.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511408.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo] >KAG6572044.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011711.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 117.1 bits (292), Expect = 7.0e-23
Identity = 56/68 (82.35%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 1  MASMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVE 60
          MASM+A G + +WT KQNKAFEKALAVYD+DTPERWLNVAKAIGGKTEEEVK+HYQLL++
Sbjct: 1  MASMSAHGSAGSWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLLK 60

Query: 61 DVKHIESG 69
          DVK IESG
Sbjct: 61 DVKQIESG 68

[Close]

BLAST of PI0027508 vs. NCBI nr
Match: PON86029.1 (Octamer-binding transcription factor [Trema orientale])

HSP 1 Score: 117.1 bits (292), Expect = 7.0e-23
Identity = 54/67 (80.60%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 2  ASMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVED 61
          +SM++RG S +WT KQNKAFEKALAVYDKDTP+RW NVAKA+GGKT EEVK+HY+LLVED
Sbjct: 4  SSMSSRGSSASWTAKQNKAFEKALAVYDKDTPDRWYNVAKAVGGKTPEEVKRHYELLVED 63

Query: 62 VKHIESG 69
          VKHIESG
Sbjct: 64 VKHIESG 70

[Close]

BLAST of PI0027508 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 92.8 bits (229), Expect = 1.3e-19
Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 1  MASMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVE 60
          MAS  +R   + WT  QNK FE+ALAVYDKDTP+RW NVAKA+GGKT EEVK+HY +LVE
Sbjct: 1  MAS-NSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVE 60

Query: 61 DVKHIESGSWIEPAPSVFE 80
          D+ +IE+G    P    FE
Sbjct: 61 DLINIETGRVPLPNYKTFE 78

[Close]

BLAST of PI0027508 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 92.8 bits (229), Expect = 1.3e-19
Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 1  MASMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVE 60
          MAS  +R   + WT  QNK FE+ALAVYDKDTP+RW NVAKA+GGKT EEVK+HY +LVE
Sbjct: 1  MAS-NSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVE 60

Query: 61 DVKHIESGSWIEPAPSVFE 80
          D+ +IE+G    P    FE
Sbjct: 61 DLINIETGRVPLPNYKTFE 78

[Close]

BLAST of PI0027508 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 92.4 bits (228), Expect = 1.7e-19
Identity = 43/67 (64.18%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 2  ASMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVED 61
          +SM+++  S +WT KQNKAFE+ALA YD+DTP RW NVAK +GGKT EEVK+HY+LLV+D
Sbjct: 4  SSMSSQS-SGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQD 63

Query: 62 VKHIESG 69
          +  IE+G
Sbjct: 64 INSIENG 69

[Close]

BLAST of PI0027508 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 90.5 bits (223), Expect = 6.6e-19
Identity = 43/66 (65.15%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1  MASMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVE 60
          MAS ++   S++WT+KQNK FE+ALAVYDKDTP+RW NVAKA+G K+ EEVK+HY +LVE
Sbjct: 1  MAS-SSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVE 60

Query: 61 DVKHIE 67
          D+ +IE
Sbjct: 61 DLMNIE 65

[Close]

BLAST of PI0027508 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 90.5 bits (223), Expect = 6.6e-19
Identity = 43/66 (65.15%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 3  SMTARGPSTTWTTKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKKHYQLLVEDV 62
          SM++ G S +WT KQNKAFE+ALAVYD+DTP+RW NVA+A+GGKT EE K+ Y LLV D+
Sbjct: 5  SMSSYG-SGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 64

Query: 63 KHIESG 69
          + IE+G
Sbjct: 65 ESIENG 69

The following BLAST results are available for this feature:

BLAST of PI0027508 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q58FS3	3.4e-20	67.19	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]
Q1A173	1.9e-18	60.76	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]
F4JVB8	2.4e-18	64.18	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
Q6NNN0	7.1e-18	60.94	Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1	[more]
Q9SIJ5	9.3e-18	65.15	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]

BLAST of PI0027508 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3K5	4.8e-33	92.50	SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G169590 PE=4 S...	[more]
A0A5A7T3V4	1.0e-27	94.12	Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BGF6	2.6e-23	85.29	protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1	[more]
A0A2P5EKH9	3.4e-23	80.60	Octamer-binding transcription factor OS=Trema orientale OX=63057 GN=TorRG33x02_1...	[more]
A0A6J1GKK4	3.4e-23	82.35	protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454836 PE=4 SV=1	[more]

BLAST of PI0027508 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036165.1	2.1e-27	94.12	protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK19711.1 protein RADIALIS-...	[more]
KAE8645640.1	3.6e-27	94.12	hypothetical protein Csa_020521 [Cucumis sativus]	[more]
XP_008447025.1	5.4e-23	85.29	PREDICTED: protein RADIALIS-like 1 [Cucumis melo]	[more]
XP_022952074.1	7.0e-23	82.35	protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511408.1 protein RADIALIS-li...	[more]
PON86029.1	7.0e-23	80.60	Octamer-binding transcription factor [Trema orientale]	[more]

BLAST of PI0027508 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75250.1	1.3e-19	60.76	RAD-like 6	[more]
AT1G75250.2	1.3e-19	60.76	RAD-like 6	[more]
AT4G39250.1	1.7e-19	64.18	RAD-like 1	[more]
AT1G19510.1	6.6e-19	65.15	RAD-like 5	[more]
AT2G21650.1	6.6e-19	65.15	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 9..61 e-value: 1.2E-6 score: 38.1
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 13..59 score: 6.086305
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 12..59 e-value: 1.27722E-5 score: 36.7846
None	No IPR available	GENE3D	1.10.10.60		coord: 4..71 e-value: 6.1E-22 score: 79.2
None	No IPR available	PANTHER	PTHR43952:SF74	PROTEIN RADIALIS-LIKE 2	coord: 5..69
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 12..57 e-value: 1.9E-5 score: 24.8
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 5..69
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0027508.1	PI0027508.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity