Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAGCAATAATGAAGAATGGGACGAAGATGATTTCGGCAATCGCCGAGGAGGACGAGCAAAAGATGATGGCATGGATAAGAACGTCGTGGTGGCATTGCAGGGACAAATGACTGCGATGAACAATTTACTTAAATCAATAGCAATATCGCAAATCAATGCCGCAGGAAGCTCTGTGCTCGCGACTAATCAAATTGATGACATGGGATGTGTGGAATGCGGCGGTCATCATAACACTGACGCATGCCCACTTAATACTGAAACCGTCGCGTTCGTAAGGAACGACCTCTTCTCCAATACCTACAACCTTGGTTGGAGGAACCATCCCAACTTTGGATGGGGAGGATTGGGTCAACAACAAGGGCGACATGGTGGTCAAGGTGACCATCGCGGGGAAGCACCTGGCTCCCACGCGAGGTACCAAAACACTAGACCCCAACAATCCCATCATCAACAGCATCCCACCACCACCGCCTCGTCCACCTCTCCCATGGAAAACCTCCTCCGCGAATACATGCAGAAAAATGATGCTCTTCTGCAAAGCCAAGCTTCATCAATTCGTAATCTGGAAGTACAGTTAGGTCAGCTCGCTAGTGATTTCTCCGGAAGACAGCAAGGATCCCTTCCGAGCAATACAGAAACGCCAAACAGGCGGGAGGATCTGGTAAAGAGAAGTGTCACGCGGTGA
mRNA sequence
ATGGCCAGCAATAATGAAGAATGGGACGAAGATGATTTCGGCAATCGCCGAGGAGGACGAGCAAAAGATGATGGCATGGATAAGAACGTCGTGGTGGCATTGCAGGGACAAATGACTGCGATGAACAATTTACTTAAATCAATAGCAATATCGCAAATCAATGCCGCAGGAAGCTCTGTGCTCGCGACTAATCAAATTGATGACATGGGATGTGTGGAATGCGGCGGTCATCATAACACTGACGCATGCCCACTTAATACTGAAACCGTCGCGTTCGTAAGGAACGACCTCTTCTCCAATACCTACAACCTTGGTTGGAGGAACCATCCCAACTTTGGATGGGGAGGATTGGGTCAACAACAAGGGCGACATGGTGGTCAAGGTGACCATCGCGGGGAAGCACCTGGCTCCCACGCGAGGTACCAAAACACTAGACCCCAACAATCCCATCATCAACAGCATCCCACCACCACCGCCTCGTCCACCTCTCCCATGGAAAACCTCCTCCGCGAATACATGCAGAAAAATGATGCTCTTCTGCAAAGCCAAGCTTCATCAATTCGTAATCTGGAAGTACAGTTAGGTCAGCTCGCTAGTGATTTCTCCGGAAGACAGCAAGGATCCCTTCCGAGCAATACAGAAACGCCAAACAGGCGGGAGGATCTGGTAAAGAGAAGTGTCACGCGGTGA
Coding sequence (CDS)
ATGGCCAGCAATAATGAAGAATGGGACGAAGATGATTTCGGCAATCGCCGAGGAGGACGAGCAAAAGATGATGGCATGGATAAGAACGTCGTGGTGGCATTGCAGGGACAAATGACTGCGATGAACAATTTACTTAAATCAATAGCAATATCGCAAATCAATGCCGCAGGAAGCTCTGTGCTCGCGACTAATCAAATTGATGACATGGGATGTGTGGAATGCGGCGGTCATCATAACACTGACGCATGCCCACTTAATACTGAAACCGTCGCGTTCGTAAGGAACGACCTCTTCTCCAATACCTACAACCTTGGTTGGAGGAACCATCCCAACTTTGGATGGGGAGGATTGGGTCAACAACAAGGGCGACATGGTGGTCAAGGTGACCATCGCGGGGAAGCACCTGGCTCCCACGCGAGGTACCAAAACACTAGACCCCAACAATCCCATCATCAACAGCATCCCACCACCACCGCCTCGTCCACCTCTCCCATGGAAAACCTCCTCCGCGAATACATGCAGAAAAATGATGCTCTTCTGCAAAGCCAAGCTTCATCAATTCGTAATCTGGAAGTACAGTTAGGTCAGCTCGCTAGTGATTTCTCCGGAAGACAGCAAGGATCCCTTCCGAGCAATACAGAAACGCCAAACAGGCGGGAGGATCTGGTAAAGAGAAGTGTCACGCGGTGA
Protein sequence
MASNNEEWDEDDFGNRRGGRAKDDGMDKNVVVALQGQMTAMNNLLKSIAISQINAAGSSVLATNQIDDMGCVECGGHHNTDACPLNTETVAFVRNDLFSNTYNLGWRNHPNFGWGGLGQQQGRHGGQGDHRGEAPGSHARYQNTRPQQSHHQQHPTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTETPNRREDLVKRSVTR
Homology
BLAST of PI0027293 vs. ExPASy TrEMBL
Match:
A0A5D3D2S0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00800 PE=4 SV=1)
HSP 1 Score: 165.6 bits (418), Expect = 2.4e-37
Identity = 105/227 (46.26%), Postives = 137/227 (60.35%), Query Frame = 0
Query: 1 MASNNEEWDEDDFGNRRGGRAKDD-GMDKNVVVALQGQMTAMNNLLKSIAISQINAAGSS 60
+ +N++E +DD + R + D GMD+NV+VALQGQ+T M LL+S+A+SQ++A G+
Sbjct: 16 ITNNSQELRDDDLRLQHESRGRTDAGMDRNVIVALQGQVTKMKKLLQSMALSQVDAVGNY 75
Query: 61 VLATNQIDDMGCVECGGHHNTDACPLNTETVAFVRNDLFSNTYNLGWRNHPNFGWGGLGQ 120
V A Q+D+M V CG H TDAC LN E A+V++ +SNTYN
Sbjct: 76 VQAVKQVDEMRPVGCGEPHTTDACLLNAEIAAYVKSYPYSNTYN---------------- 135
Query: 121 QQGRHGGQGDHRGEAPGSHARYQNTRPQQS--HHQQHPTTTASSTSPMENLLREYMQKND 180
G++RGEAP R+ + RP S HQQ T T SS S M LLR+YMQ+ D
Sbjct: 136 -------AGNYRGEAPDHRQRHYD-RPHYSAPQHQQATTNTPSSFSSMVALLRKYMQRKD 195
Query: 181 ALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTETPNRREDLVK 225
A +QSQ +SI NLE+ LGQLA DFSGR GSLPSN E PN + K
Sbjct: 196 AFMQSQTTSIINLEIHLGQLAKDFSGRPHGSLPSNIEVPNHNNGVHK 218
BLAST of PI0027293 vs. ExPASy TrEMBL
Match:
A0A5D3CSC7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1610G00360 PE=4 SV=1)
HSP 1 Score: 137.9 bits (346), Expect = 5.3e-29
Identity = 65/113 (57.52%), Postives = 85/113 (75.22%), Query Frame = 0
Query: 1 MASNNEEWDEDDFGNRRGGRAK-DDGMDKNVVVALQGQMTAMNNLLKSIAISQINAAGSS 60
+A NNEEWD+D F + RGGR K ++G+D+NV+V QGQMTAMNNLL+ + Q+NAA SS
Sbjct: 37 IAINNEEWDDDGFDSHRGGRGKNEEGLDRNVMVVPQGQMTAMNNLLQLMVFLQVNAASSS 96
Query: 61 VLATNQIDDMGCVECGGHHNTDACPLNTETVAFVRNDLFSNTYNLGWRNHPNF 113
+ Q+D++GC+ G H DACPLN E VA+V++D +SNTYN WRNHPNF
Sbjct: 97 FQSVKQVDEIGCMRFGSPHKIDACPLNIEIVAYVKHDPYSNTYNPRWRNHPNF 149
BLAST of PI0027293 vs. ExPASy TrEMBL
Match:
A0A5D3CC26 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00270 PE=4 SV=1)
HSP 1 Score: 117.9 bits (294), Expect = 5.7e-23
Identity = 82/228 (35.96%), Postives = 114/228 (50.00%), Query Frame = 0
Query: 1 MASNNEEWDEDDFGNR------RGGRAK-DDGMDKNVVVALQGQMTAMNNLLKSIAISQI 60
MASN++EW ++ FG+R +G R + +DG+D +++VALQGQ+ M N+L+S+A+ Q+
Sbjct: 74 MASNSQEWRDESFGSRNDSRGTKGNRGRIEDGIDMSIMVALQGQVIEM-NILQSMALLQV 133
Query: 61 NAAGSSVLATNQIDDMGCVECGGHHNTDACPLNTETVAFVRNDLFSNTYNLGWRNHPNFG 120
N SSV Q+++MGCV C HNT+ACPLNTE VA+++ND +
Sbjct: 134 NVVRSSVQMVQQVNEMGCVGCRAPHNTNACPLNTEIVAYLKND----------PTPIHIM 193
Query: 121 WGGLGQQQGRHGGQGDHRGEAPGSHARYQNTRPQQSHHQQHPTTTASSTSPMENLLREYM 180
WGG Q
Sbjct: 194 WGGETTQ----------------------------------------------------- 231
Query: 181 QKNDALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTETPNRRED 222
+ SQASSI+N+E+QLGQL SDFS R + S PSNTETPN+ D
Sbjct: 254 ------ISSQASSIKNMELQLGQLTSDFSRRPKRSFPSNTETPNQERD 231
BLAST of PI0027293 vs. ExPASy TrEMBL
Match:
A0A5A7UTC1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76994G00070 PE=4 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 1.4e-21
Identity = 53/102 (51.96%), Postives = 70/102 (68.63%), Query Frame = 0
Query: 31 VVALQGQMTAMNNLLKSIAISQINAAGSSVLATNQIDDMGCVECGGHHNTDACPLNTETV 90
+VALQGQ+T M+ LL+S+ ++Q+N SSV + +M CV C G +NTD CP NT+ +
Sbjct: 1 MVALQGQVTEMSKLLQSMVLAQVNVVSSSVHVVKHVAEMDCVGCSGSYNTDVCPFNTKMI 60
Query: 91 AFVRNDLFSNTYNLGWRNHPNFGWGGLGQ-QQGRHGGQGDHR 132
+ +ND +SNTYN GWRNH NF WGG GQ QGR G Q +R
Sbjct: 61 TYAKNDPYSNTYNGGWRNHSNFSWGGTGQDNQGRQGDQEHYR 102
BLAST of PI0027293 vs. ExPASy TrEMBL
Match:
A0A6J1DYG0 (uncharacterized protein LOC111025764 OS=Momordica charantia OX=3673 GN=LOC111025764 PE=4 SV=1)
HSP 1 Score: 111.7 bits (278), Expect = 4.1e-21
Identity = 82/247 (33.20%), Postives = 128/247 (51.82%), Query Frame = 0
Query: 1 MASNNEEWDEDDFGNRRGGRAKDDG--MDKNVVVALQGQMTAMNNLLKSIAISQINAAGS 60
+AS+NE W +R + +D + ++ ++Q + MN LK + + N +
Sbjct: 26 LASHNELWCSQ--RSRAAPKKQDPAGVLALDIASSMQKEKVTMNQRLKEMVLGLKNPLAT 85
Query: 61 SVLATN----------QIDDMGCVECGGHHNTDACPLNTETVAFV-----RN-DLFSNTY 120
+ Q++D+ C C +H D CP N +V +V RN + +SNTY
Sbjct: 86 PIQPVQSDYCTPAPVCQVNDLICSFCSENHIYDXCPHNPASVFYVGHGNNRNFNPYSNTY 145
Query: 121 NLGWRNHPNFGWGGLGQQQGRHGGQGDHRGEAPGSHARYQNTRPQQSHHQQHPT-TTASS 180
N GWR+HPNF W G G G + GQ + + PQQ ++Q+ T ++
Sbjct: 146 NPGWRHHPNFSWXGQGGSXGFNQGQSQQNKQPYVPPTQQYIPPPQQRYNQRTQTPPVQNN 205
Query: 181 TSPMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTETPNRRED 229
S +EN+++EYM + DA++QSQA+S+RN E QLGQLA++ R QGS P +TE P R
Sbjct: 206 NSNLENMMKEYMARTDAVIQSQAASMRNFETQLGQLANELKNRPQGSFPXHTELPKREGK 265
BLAST of PI0027293 vs. NCBI nr
Match:
KAA0040852.1 (hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa] >TYK17828.1 hypothetical protein E5676_scaffold306G00800 [Cucumis melo var. makuwa])
HSP 1 Score: 165.6 bits (418), Expect = 4.9e-37
Identity = 105/227 (46.26%), Postives = 137/227 (60.35%), Query Frame = 0
Query: 1 MASNNEEWDEDDFGNRRGGRAKDD-GMDKNVVVALQGQMTAMNNLLKSIAISQINAAGSS 60
+ +N++E +DD + R + D GMD+NV+VALQGQ+T M LL+S+A+SQ++A G+
Sbjct: 16 ITNNSQELRDDDLRLQHESRGRTDAGMDRNVIVALQGQVTKMKKLLQSMALSQVDAVGNY 75
Query: 61 VLATNQIDDMGCVECGGHHNTDACPLNTETVAFVRNDLFSNTYNLGWRNHPNFGWGGLGQ 120
V A Q+D+M V CG H TDAC LN E A+V++ +SNTYN
Sbjct: 76 VQAVKQVDEMRPVGCGEPHTTDACLLNAEIAAYVKSYPYSNTYN---------------- 135
Query: 121 QQGRHGGQGDHRGEAPGSHARYQNTRPQQS--HHQQHPTTTASSTSPMENLLREYMQKND 180
G++RGEAP R+ + RP S HQQ T T SS S M LLR+YMQ+ D
Sbjct: 136 -------AGNYRGEAPDHRQRHYD-RPHYSAPQHQQATTNTPSSFSSMVALLRKYMQRKD 195
Query: 181 ALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTETPNRREDLVK 225
A +QSQ +SI NLE+ LGQLA DFSGR GSLPSN E PN + K
Sbjct: 196 AFMQSQTTSIINLEIHLGQLAKDFSGRPHGSLPSNIEVPNHNNGVHK 218
BLAST of PI0027293 vs. NCBI nr
Match:
XP_038902418.1 (uncharacterized protein LOC120089063 [Benincasa hispida])
HSP 1 Score: 146.7 bits (369), Expect = 2.4e-31
Identity = 89/222 (40.09%), Postives = 134/222 (60.36%), Query Frame = 0
Query: 1 MASNNEEWDEDDFGNRRGGRAKDDGMD--KNVVVALQGQMTAMNNLLKSIAISQ--INAA 60
++ N +W +D +G R + K++ + V AL QM + ++L+++A++Q I
Sbjct: 111 ISQNMNDWIDDRYGRRGSNQRKNETVIVLAETVTALAAQMATITSILQNMAMNQGVIPPQ 170
Query: 61 GSSVLATNQIDDMGCVECGGHHNTDACPLNTETVAFVRNDLFSNTYNLGWRNHPNFGWGG 120
+ ++ Q+ +GCV CGG H D CPL + V ++ + FSNTYN GWR+HPNFGWGG
Sbjct: 171 SAQLVVQAQVAVIGCVNCGGVHGADCCPLYLQQVCAIQGNSFSNTYNPGWRSHPNFGWGG 230
Query: 121 LGQQQGRHGGQGDHRGEAPGSHARYQNTRPQQSHHQQHPTTTASSTS--PMENLLREYMQ 180
Q GG H+ G+ +YQ Q Q P+ + S+TS +E+LL++YM
Sbjct: 231 NPNQ----GGPMYHKSGNRGNFNQYQG---QSRIQNQQPSKSTSNTSGESLESLLKQYMD 290
Query: 181 KNDALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTETP 217
KNDA++Q+Q SSIRNLE+Q+ QLAS+ R G+LPSN+E P
Sbjct: 291 KNDAVMQAQVSSIRNLEIQVHQLASEHRNRAPGTLPSNSEDP 325
BLAST of PI0027293 vs. NCBI nr
Match:
XP_038902511.1 (uncharacterized protein LOC120089170 [Benincasa hispida])
HSP 1 Score: 143.3 bits (360), Expect = 2.6e-30
Identity = 87/223 (39.01%), Postives = 136/223 (60.99%), Query Frame = 0
Query: 4 NNEEWDEDDFGNRRGGRAKDDG--MDKNVVVALQGQMTAMNNLLKSIAIS----QINAAG 63
N ++W ++ +G R R K + + +++ L QM + +LL+ +AI+ AA
Sbjct: 166 NTDDWVDNGYGGRGPERRKAESAIIPVDIMTTLAAQMATVTSLLQMMAINHGTLSQGAAQ 225
Query: 64 SSVLATNQIDDMGCVECGGHHNTDACPLNTETVAFVRNDLFSNTYNLGWRNHPNFGWGGL 123
+ LA Q+ + C +CG H+ + CP N + V ++N+ ++NTYN GWRNHPNF WGG
Sbjct: 226 DNTLA--QVAVISCAQCGEGHSVEMCPSNPQAVYSIQNNPYNNTYNPGWRNHPNFNWGGN 285
Query: 124 GQQQGRHGGQ--GDHRGEAPGSHARYQNTRPQ--QSHHQQHPTTTASSTSPMENLLREYM 183
Q G+ Q ++RG P H + Q QSH+Q + ++++S +E LL++Y+
Sbjct: 286 NDQGGQRNLQNNSENRGNPPVFHQGLNQSHHQSRQSHNQPSSSNFSTNSSSLEALLKQYI 345
Query: 184 QKNDALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTETP 217
+KNDA++QSQASSIRNLEVQ+GQLA++ R G +PSN+E P
Sbjct: 346 EKNDAVMQSQASSIRNLEVQMGQLAAELRNRALGMMPSNSEAP 386
BLAST of PI0027293 vs. NCBI nr
Match:
XP_030498047.1 (uncharacterized protein LOC115713707 [Cannabis sativa])
HSP 1 Score: 141.7 bits (356), Expect = 7.7e-30
Identity = 96/227 (42.29%), Postives = 130/227 (57.27%), Query Frame = 0
Query: 1 MASNNEEWDEDDFGNRRGGRAKDDG-MDKNVVVALQGQMTAMNNLLKSIAISQINAAGS- 60
+ASNN +W NR K G ++ + + AL QM +M N+LK+ +N GS
Sbjct: 74 IASNNYQWST----NRAPTSRKVAGVLEVDALTALTAQMASMTNILKN-----MNMGGSV 133
Query: 61 SVLATNQIDDMGCVECGGHHNTDACPLNTETVAFV-------RNDLFSNTYNLGWRNHPN 120
A Q ++ CV CG H + CP N +V +V N+ +SN+YN W++HPN
Sbjct: 134 QPAAAIQRAEISCVYCGDGHTFENCPSNPASVCYVGNQNFNRNNNPYSNSYNPAWKHHPN 193
Query: 121 FGWGGLGQQQGRHGGQGDHRGEAPGSHARYQNTRPQQSHHQQHPTTTASSTSPMENLLRE 180
F WGG G G QG + P + Q RPQQSH Q S TS +E+L+R+
Sbjct: 194 FSWGGQGASSS--GAQGQGKQSFPPGFS--QQPRPQQSHQPQ-----GSQTSSLESLMRD 253
Query: 181 YMQKNDALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTETPNR 219
YM KNDA++QSQA+S+RNLEVQLGQLA++ R QG+LPS+TE P R
Sbjct: 254 YMAKNDAVIQSQAASLRNLEVQLGQLANNLKNRPQGTLPSDTENPRR 282
BLAST of PI0027293 vs. NCBI nr
Match:
XP_030487620.1 (uncharacterized protein LOC115704559 [Cannabis sativa])
HSP 1 Score: 139.0 bits (349), Expect = 5.0e-29
Identity = 95/227 (41.85%), Postives = 128/227 (56.39%), Query Frame = 0
Query: 1 MASNNEEWDEDDFGNRRGGRAKDDG-MDKNVVVALQGQMTAMNNLLKSIAISQINAAGS- 60
+ASNN +W NR K G ++ + + AL QM +M N+LK+ +N GS
Sbjct: 66 IASNNYQWST----NRAPTSRKVAGVLEVDALTALTAQMASMTNILKN-----MNMGGSV 125
Query: 61 SVLATNQIDDMGCVECGGHHNTDACPLNTETVAFV-------RNDLFSNTYNLGWRNHPN 120
A Q ++ CV CG H + CP N +V +V N+ +SN+YN GW++HPN
Sbjct: 126 QPAAAIQRAEISCVYCGDGHTFENCPSNPASVCYVGNQNFNRNNNPYSNSYNPGWKHHPN 185
Query: 121 FGWGGLGQQQGRHGGQGDHRGEAPGSHARYQNTRPQQSHHQQHPTTTASSTSPMENLLRE 180
F WGG G G QG + P + Q RPQQ S TS +E+L+R+
Sbjct: 186 FSWGGQGASSS--GAQGQGKQSFPPGFS--QQPRPQQPQ--------GSQTSSLESLMRD 245
Query: 181 YMQKNDALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTETPNR 219
YM KNDA++QSQA+S+RNLEVQLGQLA+D R QG+LPS+TE P R
Sbjct: 246 YMAKNDAVIQSQAASLRNLEVQLGQLANDLKNRPQGTLPSDTENPRR 271
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3D2S0 | 2.4e-37 | 46.26 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3CSC7 | 5.3e-29 | 57.52 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3CC26 | 5.7e-23 | 35.96 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7UTC1 | 1.4e-21 | 51.96 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1DYG0 | 4.1e-21 | 33.20 | uncharacterized protein LOC111025764 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
Match Name | E-value | Identity | Description | |
KAA0040852.1 | 4.9e-37 | 46.26 | hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa] >TYK1782... | [more] |
XP_038902418.1 | 2.4e-31 | 40.09 | uncharacterized protein LOC120089063 [Benincasa hispida] | [more] |
XP_038902511.1 | 2.6e-30 | 39.01 | uncharacterized protein LOC120089170 [Benincasa hispida] | [more] |
XP_030498047.1 | 7.7e-30 | 42.29 | uncharacterized protein LOC115713707 [Cannabis sativa] | [more] |
XP_030487620.1 | 5.0e-29 | 41.85 | uncharacterized protein LOC115704559 [Cannabis sativa] | [more] |
Match Name | E-value | Identity | Description | |