PI0027148 (gene) Melon (PI 482460) v1

Overview


Name	PI0027148
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	MuDRA-like transposase
Location	chr04: 27148573 .. 27149483 (+)
RNA-Seq Expression	PI0027148
Synteny	PI0027148

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCCAAAAAAACCAGAAATTGGACTCACTTGATCTTAACATTGAGATAGTCCCAGAGTACACACCTGTCTTGAATGATGTCAAAGATTTTAGTCCATTACATGCAAAAATTTGTCTTGTACGGTTGAAAGACGATATAGATAGACTGGGTAGCATGGTCGATGTAGGGTCTTCTGACCATGATTTTGATGACAATGATAATGAATTTGGGATGGATGTCTCATCTGATGATGTTGTTGAGGAGTTAGATGTGTCTGATGCGGATGTCAATACTCGTCTTAGAACCAATATTAAATTCATAGACATTGATCCTACACTGAACCCTACCTCGAAGATATACAGGTCGGTTATTTGTTTTTAAATAAGAAAAAATTAGTGAAGAAATTTTATGTACTGTTTGCCATTATGAAGAATTTTTAGTTCAATGTGCACAGATCGAACTGGTAGTTATATGTCCTTAGATGCTCGAATGTTGCCTATTTGTAGAAACTAAAGGCTATCAAGCTGAAAGATTATGAATTGTTTAATGTTTCTAAGTATGAAAGTACGCACACATACCACAAAATCCTAAGAGAACAAGATCACAAGCAAGCAAAGAGTTGGGTCATAGCCGAACTATTTCAGTCAAAATACCAAGATGTTAGTCGTGCTTATAGGTCGAAAGAAATAATTCAGGATTCTCGAATGGAATTTAGCATAGATATTACGTATGAGAAGGCATGGAGGGCTCAAGAAGCTACATTCTGCATGGTAAGAGGTTCCTTTAGAGAATCTTATGCTTTGTTAGCTTGGTATAGGGAAGCGTTGAAGGTTTCGAACCCCAGAAGTCAATTTGATTTGGAGACAGAACCCGATGGTCATTTTAAATATATGTATTGTTGGGTTTTATGTCCTAAAACTCGTAGATAG

mRNA sequence

ATGACCCAAAAAAACCAGAAATTGGACTCACTTGATCTTAACATTGAGATAGTCCCAGAGTACACACCTGTCTTGAATGATGTCAAAGATTTTAGTCCATTACATGCAAAAATTTGTCTTGTACGGTTGAAAGACGATATAGATAGACTGGGTAGCATGGTCGATGTAGGGTCTTCTGACCATGATTTTGATGACAATGATAATGAATTTGGGATGGATGTCTCATCTGATGATGTTGTTGAGGAGTTAGATGTGTCTGATGCGGATGTCAATACTCGTCTTAGAACCAATATTAAATTCATAGACATTGATCCTACACTGAACCCTACCTCGAAGATATACAGGTCGAAAGAAATAATTCAGGATTCTCGAATGGAATTTAGCATAGATATTACGTATGAGAAGGCATGGAGGGCTCAAGAAGCTACATTCTGCATGGTAAGAGGTTCCTTTAGAGAATCTTATGCTTTGTTAGCTTGGTATAGGGAAGCGTTGAAGGTTTCGAACCCCAGAAGTCAATTTGATTTGGAGACAGAACCCGATGGTCATTTTAAATATATGTATTGTTGGGTTTTATGTCCTAAAACTCGTAGATAG

Coding sequence (CDS)

ATGACCCAAAAAAACCAGAAATTGGACTCACTTGATCTTAACATTGAGATAGTCCCAGAGTACACACCTGTCTTGAATGATGTCAAAGATTTTAGTCCATTACATGCAAAAATTTGTCTTGTACGGTTGAAAGACGATATAGATAGACTGGGTAGCATGGTCGATGTAGGGTCTTCTGACCATGATTTTGATGACAATGATAATGAATTTGGGATGGATGTCTCATCTGATGATGTTGTTGAGGAGTTAGATGTGTCTGATGCGGATGTCAATACTCGTCTTAGAACCAATATTAAATTCATAGACATTGATCCTACACTGAACCCTACCTCGAAGATATACAGGTCGAAAGAAATAATTCAGGATTCTCGAATGGAATTTAGCATAGATATTACGTATGAGAAGGCATGGAGGGCTCAAGAAGCTACATTCTGCATGGTAAGAGGTTCCTTTAGAGAATCTTATGCTTTGTTAGCTTGGTATAGGGAAGCGTTGAAGGTTTCGAACCCCAGAAGTCAATTTGATTTGGAGACAGAACCCGATGGTCATTTTAAATATATGTATTGTTGGGTTTTATGTCCTAAAACTCGTAGATAG

Protein sequence

MTQKNQKLDSLDLNIEIVPEYTPVLNDVKDFSPLHAKICLVRLKDDIDRLGSMVDVGSSDHDFDDNDNEFGMDVSSDDVVEELDVSDADVNTRLRTNIKFIDIDPTLNPTSKIYRSKEIIQDSRMEFSIDITYEKAWRAQEATFCMVRGSFRESYALLAWYREALKVSNPRSQFDLETEPDGHFKYMYCWVLCPKTRR

Homology

[Close]

BLAST of PI0027148 vs. ExPASy TrEMBL
Match: A0A5D3CFW2 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00280 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 7.9e-29
Identity = 80/170 (47.06%), Postives = 103/170 (60.59%), Query Frame = 0


Query: 1   MTQKNQKLDSLDLNIEIVPEYTPVLNDVKDFSPLHAKICLVRLKDDIDRLGSMVDVGSSD 60
           M QKN KL SL+ N++++PEY  VLN+V++ S L   +C + L DD +RL SMV V S D
Sbjct: 1   MAQKNIKLSSLEPNLQLIPEYNVVLNEVRNLSSLTVNVCPLELGDDTNRLVSMVHVKSFD 60

Query: 61  HDFDDNDNEFGMDVSSDDVVEELDVSDADVNTRLRTNIKFIDIDPTLNPTSKIYRSKEII 120
            DF+DNDN FGM++SS+ ++            RLR N                    EII
Sbjct: 61  DDFNDNDNSFGMEISSEIMMLR----------RLRPN--------------------EII 120

Query: 121 QDSRMEFSIDITYEKAWRAQEATFCMVRGSFRESYALLAWYREALKVSNP 171
           QD R E+ +DITY +AWRA+EA   MV GSF+ESY LLA Y EALK+S P
Sbjct: 121 QDFRKEYKVDITYVRAWRAREAALSMVGGSFKESYTLLAQYEEALKISKP 140

[Close]

BLAST of PI0027148 vs. ExPASy TrEMBL
Match: A0A5D3E646 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2376G00090 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.8e-15
Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 0


Query: 126 EFSIDITYEKAWRAQEATFCMVRGSFRESYALLAWYREALKVSNPRSQFDLETEPDGHFK 185
           EF ID++YE+AWRAQ+A   MVR S RESY LLA Y EALK+ N R+ ++LE EPDGHFK
Sbjct: 83  EFDIDLSYERAWRAQKAALSMVRKSLRESYGLLARYGEALKIVNHRTHYNLEVEPDGHFK 142

Query: 186 YMY 189
           Y+Y
Sbjct: 143 YVY 145

[Close]

BLAST of PI0027148 vs. ExPASy TrEMBL
Match: A0A5A7U446 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G001340 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 5.0e-15
Identity = 75/231 (32.47%), Postives = 108/231 (46.75%), Query Frame = 0


Query: 1   MTQKNQKLDSLDLNIEIVPEYTPVLNDVKDFSPLHAKICLVRLKDDIDRLGSM-----VD 60
           M  K++KLD    N+      + V N+ ++  PL   +C + L +D   LGS+     VD
Sbjct: 10  MVSKSKKLDFPTPNLNC----SHVSNEDRNLRPLARNVCPLELGNDRGGLGSIDNEEFVD 69

Query: 61  VG--SSDHDFDDNDNEFGMDVSSD----------DVVEELDVSDADVNTRLRTNIK---- 120
            G   SD +F  +D+  G+ +             D   E+  SD D +  L T  K    
Sbjct: 70  DGGHESDIEFKGDDDVHGLHMFDSNAQLHYEVNIDNEHEILKSDEDESPHLITKKKQKRV 129

Query: 121 ---------------FIDIDPTLNPTSKIYRSKEIIQDSRMEFSIDITYEKAWRAQEATF 180
                            D+       S  YRSKEIIQD   EF ID++Y++ WRAQE   
Sbjct: 130 EKLMGCTVFLLAESYLEDVQLKYEDVSHCYRSKEIIQDFLKEFGIDLSYKRVWRAQEVIH 189

Query: 181 CMVRGSFRESYALLAWYREALKVSNPRSQFDLETEPDGHFKYMYCWVLCPK 196
            M RG  +ESYALLA ++EALK++N  +  D E + D HF+   C +  P+
Sbjct: 190 SMTRGFLKESYALLARHKEALKIANLGTHCDFEVDLDDHFR--KCTLFLPR 234

[Close]

BLAST of PI0027148 vs. ExPASy TrEMBL
Match: A0A5A7V528 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00310 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 6.1e-13
Identity = 38/77 (49.35%), Postives = 57/77 (74.03%), Query Frame = 0


Query: 112 KIYRSKEIIQDSRMEFSIDITYEKAWRAQEATFCMVRGSFRESYALLAWYREALKVSNPR 171
           +IY+ ++II+D R ++ I+++YEKAWRA+E  +  VRGS +ESY LL+ Y EALK +NP 
Sbjct: 412 RIYKQRDIIEDMRQDYGINMSYEKAWRARENAYERVRGSPKESYNLLSRYGEALKFTNPG 471

Query: 172 SQFDLETEPDGHFKYMY 189
           + F +E E D  FKY++
Sbjct: 472 TIFHMELEDDRFFKYLF 488

[Close]

BLAST of PI0027148 vs. ExPASy TrEMBL
Match: A0A5A7UNZ8 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G00180 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 7.9e-13
Identity = 38/77 (49.35%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 112 KIYRSKEIIQDSRMEFSIDITYEKAWRAQEATFCMVRGSFRESYALLAWYREALKVSNPR 171
           +IY+ ++II+D R ++ I+++YEKAWRA+E  +  VRGS  ESY LL  Y EALK +NP 
Sbjct: 229 RIYKPRDIIEDMRQDYGINMSYEKAWRARENAYERVRGSLEESYNLLRRYGEALKFTNPG 288

Query: 172 SQFDLETEPDGHFKYMY 189
           + F +E E D  FKY++
Sbjct: 289 TIFHMELEDDRFFKYLF 305

[Close]

BLAST of PI0027148 vs. NCBI nr
Match: KAA0067248.1 (MuDRA-like transposase [Cucumis melo var. makuwa] >TYK10857.1 MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 137.1 bits (344), Expect = 1.6e-28
Identity = 80/170 (47.06%), Postives = 103/170 (60.59%), Query Frame = 0


Query: 1   MTQKNQKLDSLDLNIEIVPEYTPVLNDVKDFSPLHAKICLVRLKDDIDRLGSMVDVGSSD 60
           M QKN KL SL+ N++++PEY  VLN+V++ S L   +C + L DD +RL SMV V S D
Sbjct: 1   MAQKNIKLSSLEPNLQLIPEYNVVLNEVRNLSSLTVNVCPLELGDDTNRLVSMVHVKSFD 60

Query: 61  HDFDDNDNEFGMDVSSDDVVEELDVSDADVNTRLRTNIKFIDIDPTLNPTSKIYRSKEII 120
            DF+DNDN FGM++SS+ ++            RLR N                    EII
Sbjct: 61  DDFNDNDNSFGMEISSEIMMLR----------RLRPN--------------------EII 120

Query: 121 QDSRMEFSIDITYEKAWRAQEATFCMVRGSFRESYALLAWYREALKVSNP 171
           QD R E+ +DITY +AWRA+EA   MV GSF+ESY LLA Y EALK+S P
Sbjct: 121 QDFRKEYKVDITYVRAWRAREAALSMVGGSFKESYTLLAQYEEALKISKP 140

[Close]

BLAST of PI0027148 vs. NCBI nr
Match: XP_038882374.1 (uncharacterized protein LOC120073641 [Benincasa hispida])

HSP 1 Score: 92.4 bits (228), Expect = 4.6e-15
Identity = 39/76 (51.32%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 112 KIYRSKEIIQDSRMEFSIDITYEKAWRAQEATFCMVRGSFRESYALLAWYREALKVSNPR 171
           ++Y+   II+D R E+ ++I+Y+KAWRA+E T+ +VRG+  ESYA+L  Y EALK+ NP 
Sbjct: 156 RVYKPCHIIEDMRKEYGVNISYDKAWRARETTYALVRGTLEESYAVLHAYGEALKMENPA 215

Query: 172 SQFDLETEPDGHFKYM 188
           ++F++E E D HFKYM
Sbjct: 216 TRFEIELENDVHFKYM 231

[Close]

BLAST of PI0027148 vs. NCBI nr
Match: KAA0051701.1 (MuDRA-like transposase [Cucumis melo var. makuwa] >TYK31607.1 MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 91.7 bits (226), Expect = 7.9e-15
Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 0


Query: 126 EFSIDITYEKAWRAQEATFCMVRGSFRESYALLAWYREALKVSNPRSQFDLETEPDGHFK 185
           EF ID++YE+AWRAQ+A   MVR S RESY LLA Y EALK+ N R+ ++LE EPDGHFK
Sbjct: 83  EFDIDLSYERAWRAQKAALSMVRKSLRESYGLLARYGEALKIVNHRTHYNLEVEPDGHFK 142

Query: 186 YMY 189
           Y+Y
Sbjct: 143 YVY 145

[Close]

BLAST of PI0027148 vs. NCBI nr
Match: KAA0048219.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 91.3 bits (225), Expect = 1.0e-14
Identity = 75/231 (32.47%), Postives = 108/231 (46.75%), Query Frame = 0


Query: 1   MTQKNQKLDSLDLNIEIVPEYTPVLNDVKDFSPLHAKICLVRLKDDIDRLGSM-----VD 60
           M  K++KLD    N+      + V N+ ++  PL   +C + L +D   LGS+     VD
Sbjct: 10  MVSKSKKLDFPTPNLNC----SHVSNEDRNLRPLARNVCPLELGNDRGGLGSIDNEEFVD 69

Query: 61  VG--SSDHDFDDNDNEFGMDVSSD----------DVVEELDVSDADVNTRLRTNIK---- 120
            G   SD +F  +D+  G+ +             D   E+  SD D +  L T  K    
Sbjct: 70  DGGHESDIEFKGDDDVHGLHMFDSNAQLHYEVNIDNEHEILKSDEDESPHLITKKKQKRV 129

Query: 121 ---------------FIDIDPTLNPTSKIYRSKEIIQDSRMEFSIDITYEKAWRAQEATF 180
                            D+       S  YRSKEIIQD   EF ID++Y++ WRAQE   
Sbjct: 130 EKLMGCTVFLLAESYLEDVQLKYEDVSHCYRSKEIIQDFLKEFGIDLSYKRVWRAQEVIH 189

Query: 181 CMVRGSFRESYALLAWYREALKVSNPRSQFDLETEPDGHFKYMYCWVLCPK 196
            M RG  +ESYALLA ++EALK++N  +  D E + D HF+   C +  P+
Sbjct: 190 SMTRGFLKESYALLARHKEALKIANLGTHCDFEVDLDDHFR--KCTLFLPR 234

[Close]

BLAST of PI0027148 vs. NCBI nr
Match: XP_038902305.1 (uncharacterized protein LOC120088939 [Benincasa hispida])

HSP 1 Score: 88.6 bits (218), Expect = 6.6e-14
Identity = 35/77 (45.45%), Postives = 57/77 (74.03%), Query Frame = 0


Query: 112 KIYRSKEIIQDSRMEFSIDITYEKAWRAQEATFCMVRGSFRESYALLAWYREALKVSNPR 171
           ++Y+ + I+++ R E+ ++I+Y+KAWRA+E  + + RG+  ESYA+L  Y EALK+ NP 
Sbjct: 18  RVYKPRHIVENMRKEYGVNISYDKAWRARETAYALARGTLEESYAILHAYGEALKMENPG 77

Query: 172 SQFDLETEPDGHFKYMY 189
           ++F +E E D HFKYM+
Sbjct: 78  TRFGIELENDVHFKYMF 94

The following BLAST results are available for this feature:

BLAST of PI0027148 vs.


Match Name	E-value	Identity	Description

BLAST of PI0027148 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CFW2	7.9e-29	47.06	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A5D3E646	3.8e-15	65.08	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A5A7U446	5.0e-15	32.47	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6...	[more]
A0A5A7V528	6.1e-13	49.35	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1...	[more]
A0A5A7UNZ8	7.9e-13	49.35	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1...	[more]

BLAST of PI0027148 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067248.1	1.6e-28	47.06	MuDRA-like transposase [Cucumis melo var. makuwa] >TYK10857.1 MuDRA-like transpo...	[more]
XP_038882374.1	4.6e-15	51.32	uncharacterized protein LOC120073641 [Benincasa hispida]	[more]
KAA0051701.1	7.9e-15	65.08	MuDRA-like transposase [Cucumis melo var. makuwa] >TYK31607.1 MuDRA-like transpo...	[more]
KAA0048219.1	1.0e-14	32.47	MuDRA-like transposase [Cucumis melo var. makuwa]	[more]
XP_038902305.1	6.6e-14	45.45	uncharacterized protein LOC120088939 [Benincasa hispida]	[more]

BLAST of PI0027148 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0027148.1	PI0027148.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016787	hydrolase activity