PI0027010 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGTCCACTCTGAAAATTGAGTTGAAAGTTGTTCGTATGGACTTTGAATCCCTATCCAAGTCAGCAAGGATTCTAAGTTTCGGCACACAAAGTCTGGACAGTGTTTTAAAAGTCGGTAAGATTGGGATGGACAAAAGAGGTATAGGATTCTCTAATACTGATCAACAGGGAGTATCCAGTGGACACACGAGAACTGTGTTTGTTCATGCCAAGGAAGCTAGTGTCAAAGAAACGGAGAGAGGAATTGTTCAAGAGGATAAGTTAACTAACCTAAACAGGCTAGGAAAGCATAAGAGGAAGTGGGTGTGCCACTTCTGTGGGAGACCTGGACATATTTGTCTCTTTTATTATCATTTGCTTGATCAACATGCTTACGTCAACAAGAACGTGGGCAAAGATTTTAGGAGGCTCAATTCAAAACAAGGAAATTCTAAGTCTTTTTGGCAAATGAAAAGAGATGACAGGTGTAATATGGCTTTTCCATCCATTCATGCCTCGAGTAGGAAAGACCGATACTTCAATAGTGGTTGCTCCCTTCATACGACTGGAAATTGTGCATTCTTTTTTTACCTGAAGGAATGTTCTTCAGGGTACGTTACATTTGGAGATGGAGCCAAAGGGAGAGTACTAGGGAAAGACAATATTGTCAAAGTTGATTCAGCGAGACACCAAGATGTTCGTCTTGTTAAAGGCTTAACTGCTAATCTGATTAACATTAGTCAGTTGTGTGATCAGGGACTCAGTGTAAGCTTCTCAAAAGATAAATGTGAAGTTTGAGATAAAGGGATGCGTTTTTTTATCAGTGGTACGCGACTTTATGATAATTGCTATCAATGGGATCCTTGTGTTGAACAATGTGTGCAATCTGTCCAAAACGAGTGATGCTGCGTTATGGCATAAACGACTTGGACATGTTAGTCTTCCATCTATTCGCAAAGTGCTCAGTGCTGAGGCAGTCTTAGGAATTTTGTCATTCAAGACAGTTGGTGATATGTTTTGTGAAGAGTGTCTTGCTGGGAAGCAAGTCAAGGCAACCCACAAATTTGTTAATCTGTGTACTACAAATCGGGTTCTTAAGCTTTTATACATGGATCTCATGGGTCCGATGCAGGTTGAAAGCCTTGGTGGGAAGAAGTATGTGTTTGTATGCGTGGATTGCTATTCCCGTTTTGCATGAGTGAAGTTCCTGCATGAAAAATTTGATGTGTTTAAAGTTTGTCATGCTCTTTGCCTACAGCTTCAACGCAAACAAGAGAAGGCCATTATTAGAATCCATAGTGATCATGGCAGAAAATTTAAAAATGCTTCTTTTGATGAGTTTTGTTGCACGGAGGCTATTGTCCATGAGTTCTCAACTCCTTTAACTCCTCAGTAGAATGAGATGGTAGAACGGAATAATAGAACTCTACAAGAAATGGCCTGTGCTATGCTGCATGCAAATAATCTATCTCTCTACTTTTGGGTTAAAGCGTTGAATACTATGTGTTATAGCCACAAATGGATTACTTTACGTTCGAGAACTTTAAGCACAAATTATCAGCTTTGGAAAGGTGCAAACCGAATGTCAAGTATTTCCACATCTTTAGGAGTATATGTTATATTCTAGCAGACAGAGAATATTATCAGAAATGGGACTCCAAATTTGATGAAGTTATTTTTCTGGGCTATTCCACAAGCAATCAGACGTTCAGAGTGTTTAATAAGCGAACACGAACGGTCCTGAAATCTATCAATGTAGTAATAAATGACTCCTCTAAGGTGATGTATAGACGGAGAGATGATGATGATTATGTTCTGCCTGCTGTGCTTCCTTCGAGCTCTGTAAGGCTTGTTGAGAGCCAGTCAGATGTTACTTAAGTGAATGACTCCCATGATAGCTGGAGGGACAATGTATCTTTCATGTGTCAGATACTGAGGCTATAGTGGTTCCACCAGCTAATAGCTTGAAGAATAAATCTGAAGACACCAACCAGTCTGATTCTGCAGTTGTTCCTATTGGGTCCTCGTTTGCTTATGTTCTGATCTGTCAAGTAGTACTATTGGCGAGATCTAGAGTGGGATCACGACTCGTAAGAAGAAATGAATGGACTATGCCAAGATGA ATGATGTCCACTCTGAAAATTGAGTTGAAAGTTGTTCGTATGGACTTTGAATCCCTATCCAAGTCAGCAAGGATTCTAAGTTTCGGCACACAAAGTCTGGACAGTGTTTTAAAAGTCGGTAAGATTGGGATGGACAAAAGAGGTATAGGATTCTCTAATACTGATCAACAGGGAGTATCCAGTGGACACACGAGAACTGTGTTTGTTCATGCCAAGGAAGCTAGTGTCAAAGAAACGGAGAGAGGAATTGTTCAAGAGGATAAGTTAACTAACCTAAACAGGCTAGGAAAGCATAAGAGGAAGTGGGTGTGCCACTTCTGTGGGAGACCTGGACATATTTGTCTCTTTTATTATCATTTGCTTGATCAACATGCTTACGTCAACAAGAACGTGGGCAAAGATTTTAGGAGGCTCAATTCAAAACAAGGAAATTCTAAGTCTTTTTGGCAAATGAAAAGAGATGACAGGTGTAATATGGCTTTTCCATCCATTCATGCCTCGAATACTGAGGCTATAGTGGTTCCACCAGCTAATAGCTTGAAGAATAAATCTGAAGACACCAACCAGTCTGATTCTGCAGTTGTTCCTATTGGGTCCTCGTTTGCTTATGTTCTGATCTGTCAAGTAGTACTATTGGCGAGATCTAGAGTGGGATCACGACTCGTAAGAAGAAATGAATGGACTATGCCAAGATGA ATGATGTCCACTCTGAAAATTGAGTTGAAAGTTGTTCGTATGGACTTTGAATCCCTATCCAAGTCAGCAAGGATTCTAAGTTTCGGCACACAAAGTCTGGACAGTGTTTTAAAAGTCGGTAAGATTGGGATGGACAAAAGAGGTATAGGATTCTCTAATACTGATCAACAGGGAGTATCCAGTGGACACACGAGAACTGTGTTTGTTCATGCCAAGGAAGCTAGTGTCAAAGAAACGGAGAGAGGAATTGTTCAAGAGGATAAGTTAACTAACCTAAACAGGCTAGGAAAGCATAAGAGGAAGTGGGTGTGCCACTTCTGTGGGAGACCTGGACATATTTGTCTCTTTTATTATCATTTGCTTGATCAACATGCTTACGTCAACAAGAACGTGGGCAAAGATTTTAGGAGGCTCAATTCAAAACAAGGAAATTCTAAGTCTTTTTGGCAAATGAAAAGAGATGACAGGTGTAATATGGCTTTTCCATCCATTCATGCCTCGAATACTGAGGCTATAGTGGTTCCACCAGCTAATAGCTTGAAGAATAAATCTGAAGACACCAACCAGTCTGATTCTGCAGTTGTTCCTATTGGGTCCTCGTTTGCTTATGTTCTGATCTGTCAAGTAGTACTATTGGCGAGATCTAGAGTGGGATCACGACTCGTAAGAAGAAATGAATGGACTATGCCAAGATGA MMSTLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRTVFVHAKEASVKETERGIVQEDKLTNLNRLGKHKRKWVCHFCGRPGHICLFYYHLLDQHAYVNKNVGKDFRRLNSKQGNSKSFWQMKRDDRCNMAFPSIHASNTEAIVVPPANSLKNKSEDTNQSDSAVVPIGSSFAYVLICQVVLLARSRVGSRLVRRNEWTMPR Homology
BLAST of PI0027010 vs. ExPASy TrEMBL
Match: A0A5A7TJC1 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold588G00490 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 5.4e-13 Identity = 62/174 (35.63%), Postives = 92/174 (52.87%), Query Frame = 0
BLAST of PI0027010 vs. ExPASy TrEMBL
Match: A0A5D3CI39 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold874G00670 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.2e-12 Identity = 58/170 (34.12%), Postives = 93/170 (54.71%), Query Frame = 0
BLAST of PI0027010 vs. ExPASy TrEMBL
Match: A0A5D3BVP0 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001810 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 6.0e-12 Identity = 47/135 (34.81%), Postives = 74/135 (54.81%), Query Frame = 0
BLAST of PI0027010 vs. ExPASy TrEMBL
Match: A0A5A7UKN4 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G002820 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.5e-10 Identity = 52/170 (30.59%), Postives = 85/170 (50.00%), Query Frame = 0
BLAST of PI0027010 vs. ExPASy TrEMBL
Match: A0A5A7TPF7 (Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00870 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.2e-09 Identity = 46/172 (26.74%), Postives = 94/172 (54.65%), Query Frame = 0
BLAST of PI0027010 vs. NCBI nr
Match: KAA0043382.1 (gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 84.7 bits (208), Expect = 1.1e-12 Identity = 62/174 (35.63%), Postives = 92/174 (52.87%), Query Frame = 0
BLAST of PI0027010 vs. NCBI nr
Match: KAA0054893.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK11020.1 gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 83.6 bits (205), Expect = 2.5e-12 Identity = 58/170 (34.12%), Postives = 93/170 (54.71%), Query Frame = 0
BLAST of PI0027010 vs. NCBI nr
Match: KAA0061122.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK03793.1 gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 81.3 bits (199), Expect = 1.2e-11 Identity = 47/135 (34.81%), Postives = 74/135 (54.81%), Query Frame = 0
BLAST of PI0027010 vs. NCBI nr
Match: KAA0056382.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK29137.1 gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 75.9 bits (185), Expect = 5.2e-10 Identity = 52/170 (30.59%), Postives = 85/170 (50.00%), Query Frame = 0
BLAST of PI0027010 vs. NCBI nr
Match: KAA0045252.1 (gag-proteinase polyprotein [Cucumis melo var. makuwa] >TYK19278.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 73.6 bits (179), Expect = 2.6e-09 Identity = 46/172 (26.74%), Postives = 94/172 (54.65%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|