PI0027008 (gene) Melon (PI 482460) v1

Overview


Name	PI0027008
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Plastocyanin
Location	chr04: 29889010 .. 29890069 (-)
RNA-Seq Expression	PI0027008
Synteny	PI0027008

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTACATTATTTTGTTATTAAGATTTCAAATACATAAAATTGAAGTTGAAGTTGTATAGATTGTTAGTCACGTGCTTGACACATGTTTAGTTATATAGTTAGTAATATGAAAAATGTTGAGGTATAGTGGTATTGGTTTATCCAATGCCATGTCATAGGGTGGAATCCAAATGAACCAATGAGAATCACCCAAAGAAAACAGATATAATCCATAATGCACTATCCAAAGCTAAAACTAAAAGCCACACATTGCTCATCCATTCACTCCCAATCTCAAAACCACACAAAAATATCAAATCAATCTCTTTCCCTTTTCCTTATATACCACTTTCCCTCTCTTCTCCTCTTTTATTATTACCCACAAATTTCCCAATTTCTTACAACAACCATGGCCGCCGTCACCTCCGCCGCCGTCGCCATTCCTTCCTTTACCGGTCTCAAATCCTCCTCCTCCTCCAAACCCACCTCAGCCATCCGCCTCCCTTCCCCTGCCTCCCCAAAGCTAACCATCAGAGCCTCTCTTAAGGACGTCGGTGTAGCCGTTGCCGCCACCGCCGCCAGCGCTCTTTTGGCCTCAAACGCCATGGCCATCGAGATCTTGCTGGGTGGTGACGACGGTTCTCTGGCATTCGTTCCAAGCAATTTCACGGTGGCGTCAGGGGAGAAAATCGTGTTCAAGAACAACGCGGGATTCCCACACAACGTGGTGTTCGATGAGGATGAAATTCCGAGTGGAGTTGATGCCGGAAAGATCTCGATGGATGAGGAGAATCTTTTGAATGCTCCCGGCGAGGTTTACGAAGTTCAGCTTACTGAAAAAGGAAGTTACTCGTTCTACTGTTCGCCTCATCAAGGTGCTGGGATGGTCGGAAAAGTTACCGTTAATTGATGATCCGATCGATTCCATTTTTCTATGTAATGTTCTTTCTTTTTTTATGTATAATAATTTTAAAGTTGAATGTCTTTGGTTTTCCTCTTCCACTCAGAGACTGTATGCCGTAGAGCTCATAAATGGAGATTCAAAAATTCACTAATAATGTAAATGGTATTTGTTGTTCTCT

mRNA sequence

CTACATTATTTTGTTATTAAGATTTCAAATACATAAAATTGAAGTTGAAGTTGTATAGATTGTTAGTCACGTGCTTGACACATGTTTAGTTATATAGTTAGTAATATGAAAAATGTTGAGGTATAGTGGTATTGGTTTATCCAATGCCATGTCATAGGGTGGAATCCAAATGAACCAATGAGAATCACCCAAAGAAAACAGATATAATCCATAATGCACTATCCAAAGCTAAAACTAAAAGCCACACATTGCTCATCCATTCACTCCCAATCTCAAAACCACACAAAAATATCAAATCAATCTCTTTCCCTTTTCCTTATATACCACTTTCCCTCTCTTCTCCTCTTTTATTATTACCCACAAATTTCCCAATTTCTTACAACAACCATGGCCGCCGTCACCTCCGCCGCCGTCGCCATTCCTTCCTTTACCGGTCTCAAATCCTCCTCCTCCTCCAAACCCACCTCAGCCATCCGCCTCCCTTCCCCTGCCTCCCCAAAGCTAACCATCAGAGCCTCTCTTAAGGACGTCGGTGTAGCCGTTGCCGCCACCGCCGCCAGCGCTCTTTTGGCCTCAAACGCCATGGCCATCGAGATCTTGCTGGGTGGTGACGACGGTTCTCTGGCATTCGTTCCAAGCAATTTCACGGTGGCGTCAGGGGAGAAAATCGTGTTCAAGAACAACGCGGGATTCCCACACAACGTGGTGTTCGATGAGGATGAAATTCCGAGTGGAGTTGATGCCGGAAAGATCTCGATGGATGAGGAGAATCTTTTGAATGCTCCCGGCGAGGTTTACGAAGTTCAGCTTACTGAAAAAGGAAGTTACTCGTTCTACTGTTCGCCTCATCAAGGTGCTGGGATGGTCGGAAAAGTTACCGTTAATTGATGATCCGATCGATTCCATTTTTCTATGTAATGTTCTTTCTTTTTTTATGTATAATAATTTTAAAGTTGAATGTCTTTGGTTTTCCTCTTCCACTCAGAGACTGTATGCCGTAGAGCTCATAAATGGAGATTCAAAAATTCACTAATAATGTAAATGGTATTTGTTGTTCTCT

Coding sequence (CDS)

ATGCACTATCCAAAGCTAAAACTAAAAGCCACACATTGCTCATCCATTCACTCCCAATCTCAAAACCACACAAAAATATCAAATCAATCTCTTTCCCTTTTCCTTATATACCACTTTCCCTCTCTTCTCCTCTTTTATTATTACCCACAAATTTCCCAATTTCTTACAACAACCATGGCCGCCGTCACCTCCGCCGCCGTCGCCATTCCTTCCTTTACCGGTCTCAAATCCTCCTCCTCCTCCAAACCCACCTCAGCCATCCGCCTCCCTTCCCCTGCCTCCCCAAAGCTAACCATCAGAGCCTCTCTTAAGGACGTCGGTGTAGCCGTTGCCGCCACCGCCGCCAGCGCTCTTTTGGCCTCAAACGCCATGGCCATCGAGATCTTGCTGGGTGGTGACGACGGTTCTCTGGCATTCGTTCCAAGCAATTTCACGGTGGCGTCAGGGGAGAAAATCGTGTTCAAGAACAACGCGGGATTCCCACACAACGTGGTGTTCGATGAGGATGAAATTCCGAGTGGAGTTGATGCCGGAAAGATCTCGATGGATGAGGAGAATCTTTTGAATGCTCCCGGCGAGGTTTACGAAGTTCAGCTTACTGAAAAAGGAAGTTACTCGTTCTACTGTTCGCCTCATCAAGGTGCTGGGATGGTCGGAAAAGTTACCGTTAATTGA

Protein sequence

MHYPKLKLKATHCSSIHSQSQNHTKISNQSLSLFLIYHFPSLLLFYYYPQISQFLTTTMAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLTIRASLKDVGVAVAATAASALLASNAMAIEILLGGDDGSLAFVPSNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN

Homology

[Close]

BLAST of PI0027008 vs. ExPASy Swiss-Prot
Match: P00289 (Plastocyanin, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETE PE=1 SV=2)

HSP 1 Score: 239.2 bits (609), Expect = 4.5e-62
Identity = 127/168 (75.60%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 59  MAAV-TSAAVAIPSFTGLKSSSSSKPTSAIRLP-SPASPKLTIRASLKDVGVAVAATAAS 118
           MA V +SAAVA+PSFTGLK+S S KPT+A  +P + A P+L+++ASLK+VG AV ATAA+
Sbjct: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60

Query: 119 ALLASNAMAIEILLGGDDGSLAFVPSNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVD 178
            LLA NAMA+E+LLGG DGSLAF+P +F+VASGE+IVFKNNAGFPHNVVFDEDEIPSGVD
Sbjct: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 179 AGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 225
           A KISM EE+LLNAPGE Y+V LTEKG+Y FYCSPHQGAGMVGKVTVN
Sbjct: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of PI0027008 vs. ExPASy Swiss-Prot
Match: P17340 (Plastocyanin, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PETE PE=2 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 8.5e-61
Identity = 125/170 (73.53%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 59  MAAVTSAAVAIPSFTGLK--SSSSSKPTSAIRLPSPASP--KLTIRASLKDVGVAVAATA 118
           MA VTSAAVAIPSFTGLK  +SSSS+ ++       A+P  +LT++ASLKDVG  VAATA
Sbjct: 1   MATVTSAAVAIPSFTGLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATA 60

Query: 119 ASALLASNAMAIEILLGGDDGSLAFVPSNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSG 178
            SA+LASNAMA+E+LLGGDDGSLAF+P NF+V++GEKI FKNNAGFPHNVVFDEDEIP+G
Sbjct: 61  VSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAG 120

Query: 179 VDAGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 225
           VDA KISM EE+LLNA GE Y V L+EKG+Y+FYC+PHQGAGMVGKVTVN
Sbjct: 121 VDASKISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170

[Close]

BLAST of PI0027008 vs. ExPASy Swiss-Prot
Match: P00299 (Plastocyanin A, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2)

HSP 1 Score: 233.4 bits (594), Expect = 2.5e-60
Identity = 121/168 (72.02%), Postives = 146/168 (86.90%), Query Frame = 0


Query: 59  MAAVTSAAVAIPSFTGLK--SSSSSKPTSAIRLPSPASPKLTIRASLKDVGVAVAATAAS 118
           MA VTSAAV+IPSFTGLK  S+S++K +++ ++ +   P+L+I+AS+KDVG AV ATAAS
Sbjct: 1   MATVTSAAVSIPSFTGLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAAS 60

Query: 119 ALLASNAMAIEILLGGDDGSLAFVPSNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVD 178
           A++ASNAMAI++LLG DDGSLAFVPS F+++ GEKIVFKNNAGFPHN+VFDED IPSGVD
Sbjct: 61  AMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVD 120

Query: 179 AGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 225
           A KISM EE+LLNA GE +EV L+ KG YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 ASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of PI0027008 vs. ExPASy Swiss-Prot
Match: P42699 (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DRT112 PE=1 SV=2)

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-59
Identity = 121/167 (72.46%), Postives = 141/167 (84.43%), Query Frame = 0


Query: 59  MAAVTSAAVAIPSFTGLKSSS-SSKPTSAIRLPSPASPKLTIRASLKDVGVAVAATAASA 118
           MA+VTSA VAIPSFTGLK+S+  S  T  I+  + ASPKLT+++SLK+ GVA  A AAS 
Sbjct: 1   MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60

Query: 119 LLASNAMAIEILLGGDDGSLAFVPSNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 178
            LA NAMAIE+LLGG DGSLAF+P++F++A GEKIVFKNNAG+PHNVVFDEDEIPSGVD 
Sbjct: 61  ALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDV 120

Query: 179 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 225
            KISMDE++LLN  GE YEV LTE G+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 AKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]

BLAST of PI0027008 vs. ExPASy Swiss-Prot
Match: P11490 (Plastocyanin minor isoform, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PETE PE=1 SV=2)

HSP 1 Score: 228.4 bits (581), Expect = 8.0e-59
Identity = 126/174 (72.41%), Postives = 136/174 (78.16%), Query Frame = 0


Query: 59  MAAVTSAAVAIPSFTGLKSSSSSKP---------TSAIRLPSPASPKLTIRASLKDVGVA 118
           MAA+TSA V IPSFTGLK + SSKP         TSA R P    PKL +++SLKD GV 
Sbjct: 1   MAAITSATVTIPSFTGLKLAVSSKPKTLSTISRSTSATRAP----PKLALKSSLKDFGVI 60

Query: 119 VAATAASALLASNAMAIEILLGGDDGSLAFVPSNFTVASGEKIVFKNNAGFPHNVVFDED 178
             ATAAS +LA NAMA+E+LLG DDGSLAFVPS FTVA GEKIVFKNNAGFPHNVVFDED
Sbjct: 61  AVATAASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDED 120

Query: 179 EIPSGVDAGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTV 224
           EIPSGVDA KISMDE  LLN  GE YEV LTE GSY FYC+PHQGAGMVGK+TV
Sbjct: 121 EIPSGVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170

[Close]

BLAST of PI0027008 vs. ExPASy TrEMBL
Match: A0A5A7VCJ5 (Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001440 PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 5.0e-80
Identity = 163/166 (98.19%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 59  MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLTIRASLKDVGVAVAATAASAL 118
           MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKL++RASLKDVGVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASAL 60

Query: 119 LASNAMAIEILLGGDDGSLAFVPSNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 178
           LASNAMAIEILLGGDDGSLAFVP+NFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 179 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 225
           KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of PI0027008 vs. ExPASy TrEMBL
Match: A0A5D3E5P8 (Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007720 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.5e-79
Identity = 162/166 (97.59%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 59  MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLTIRASLKDVGVAVAATAASAL 118
           MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKL++RASLKDVGVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASAL 60

Query: 119 LASNAMAIEILLGGDDGSLAFVPSNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 178
           LASNAMAIEILLGGDDGSLAFVP+NFTVASGE IVFKNNAGFPHNVVFDEDEIPSGVDAG
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 179 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 225
           KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of PI0027008 vs. ExPASy TrEMBL
Match: A0A1S3CRA6 (Plastocyanin OS=Cucumis melo OX=3656 GN=LOC103503851 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.5e-79
Identity = 162/166 (97.59%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 59  MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLTIRASLKDVGVAVAATAASAL 118
           MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKL++RASLKDVGVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASAL 60

Query: 119 LASNAMAIEILLGGDDGSLAFVPSNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 178
           LASNAMAIEILLGGDDGSLAFVP+NFTVASGE IVFKNNAGFPHNVVFDEDEIPSGVDAG
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 179 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 225
           KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of PI0027008 vs. ExPASy TrEMBL
Match: A0A0A0LE99 (Plastocyanin OS=Cucumis sativus OX=3659 GN=Csa_3G875430 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.0e-77
Identity = 159/166 (95.78%), Postives = 162/166 (97.59%), Query Frame = 0


Query: 59  MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLTIRASLKDVGVAVAATAASAL 118
           MAAVTSAAVAIPSFTGLKS+SSSKPTS IRLPSPASPKL I+ASLKDVGVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60

Query: 119 LASNAMAIEILLGGDDGSLAFVPSNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 178
           LASNAMAIEILLGGDDGSLAFVP+NFTVASGEKI FKNNAGFPHNVVFDEDEIPSGVD G
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120

Query: 179 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 225
           KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of PI0027008 vs. ExPASy TrEMBL
Match: A0A6J1FAV0 (Plastocyanin OS=Cucurbita moschata OX=3662 GN=LOC111443648 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.6e-70
Identity = 143/167 (85.63%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 59  MAAVTSAAVAIPSFTGLKS-SSSSKPTSAIRLPSPASPKLTIRASLKDVGVAVAATAASA 118
           MA VTSA VAIP+FTGLKS +++SKPT+A+R+ SPA PKLT+RASLKD+GVAVAATAASA
Sbjct: 1   MATVTSATVAIPTFTGLKSPATASKPTAAVRVSSPAVPKLTVRASLKDIGVAVAATAASA 60

Query: 119 LLASNAMAIEILLGGDDGSLAFVPSNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 178
           LLASNA+AIE+LLGGDDGSLAF+P++F+VA+GEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 179 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 225
           GKISM+EE+LLNAPGEVYEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of PI0027008 vs. NCBI nr
Match: KAA0063319.1 (plastocyanin [Cucumis melo var. makuwa])

HSP 1 Score: 307.4 bits (786), Expect = 1.0e-79
Identity = 163/166 (98.19%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 59  MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLTIRASLKDVGVAVAATAASAL 118
           MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKL++RASLKDVGVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASAL 60

Query: 119 LASNAMAIEILLGGDDGSLAFVPSNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 178
           LASNAMAIEILLGGDDGSLAFVP+NFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 179 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 225
           KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of PI0027008 vs. NCBI nr
Match: XP_008466451.1 (PREDICTED: plastocyanin [Cucumis melo] >TYK31457.1 plastocyanin [Cucumis melo var. makuwa])

HSP 1 Score: 305.1 bits (780), Expect = 5.1e-79
Identity = 162/166 (97.59%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 59  MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLTIRASLKDVGVAVAATAASAL 118
           MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKL++RASLKDVGVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASAL 60

Query: 119 LASNAMAIEILLGGDDGSLAFVPSNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 178
           LASNAMAIEILLGGDDGSLAFVP+NFTVASGE IVFKNNAGFPHNVVFDEDEIPSGVDAG
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDAG 120

Query: 179 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 225
           KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of PI0027008 vs. NCBI nr
Match: XP_004136366.1 (plastocyanin-like [Cucumis sativus] >KGN60068.1 hypothetical protein Csa_001523 [Cucumis sativus])

HSP 1 Score: 299.7 bits (766), Expect = 2.1e-77
Identity = 159/166 (95.78%), Postives = 162/166 (97.59%), Query Frame = 0


Query: 59  MAAVTSAAVAIPSFTGLKSSSSSKPTSAIRLPSPASPKLTIRASLKDVGVAVAATAASAL 118
           MAAVTSAAVAIPSFTGLKS+SSSKPTS IRLPSPASPKL I+ASLKDVGVAVAATAASAL
Sbjct: 1   MAAVTSAAVAIPSFTGLKSTSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASAL 60

Query: 119 LASNAMAIEILLGGDDGSLAFVPSNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 178
           LASNAMAIEILLGGDDGSLAFVP+NFTVASGEKI FKNNAGFPHNVVFDEDEIPSGVD G
Sbjct: 61  LASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDVG 120

Query: 179 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 225
           KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 KISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of PI0027008 vs. NCBI nr
Match: XP_038896134.1 (plastocyanin [Benincasa hispida])

HSP 1 Score: 283.5 bits (724), Expect = 1.6e-72
Identity = 151/167 (90.42%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 59  MAAVTSAAVAIPSFTGLKSS-SSSKPTSAIRLPSPASPKLTIRASLKDVGVAVAATAASA 118
           MA VTS AVAIPSFTGLKSS ++SKPT+A+R+PSPA PK +IRASLKDVGVAVAATAA+A
Sbjct: 1   MATVTSPAVAIPSFTGLKSSGAASKPTAAVRIPSPAVPKHSIRASLKDVGVAVAATAATA 60

Query: 119 LLASNAMAIEILLGGDDGSLAFVPSNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 178
           LLASNAMAIEILLGGDDGSLAFVP+NF+VASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 179 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 225
           GKISM+EE+LLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of PI0027008 vs. NCBI nr
Match: KAG6591248.1 (Plastocyanin major isoform, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 276.6 bits (706), Expect = 1.9e-70
Identity = 146/167 (87.43%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 59  MAAVTSAAVAIPSFTGLKSS-SSSKPTSAIRLPSPASPKLTIRASLKDVGVAVAATAASA 118
           MA VTSA VAIPSFTGLKSS ++SK TSA+R+ SPA PKLT+RASLKDVGVAVAATAASA
Sbjct: 1   MATVTSATVAIPSFTGLKSSATASKSTSAVRVSSPAVPKLTVRASLKDVGVAVAATAASA 60

Query: 119 LLASNAMAIEILLGGDDGSLAFVPSNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 178
           LLASNA+AIE+LLGGDDGSLAF+P++F+VA+GEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 179 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 225
           GKISM+EE+LLNAPGEVYEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of PI0027008 vs. TAIR 10
Match: AT1G20340.1 (Cupredoxin superfamily protein )

HSP 1 Score: 230.7 bits (587), Expect = 1.1e-60
Identity = 121/167 (72.46%), Postives = 141/167 (84.43%), Query Frame = 0


Query: 59  MAAVTSAAVAIPSFTGLKSSS-SSKPTSAIRLPSPASPKLTIRASLKDVGVAVAATAASA 118
           MA+VTSA VAIPSFTGLK+S+  S  T  I+  + ASPKLT+++SLK+ GVA  A AAS 
Sbjct: 1   MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60

Query: 119 LLASNAMAIEILLGGDDGSLAFVPSNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 178
            LA NAMAIE+LLGG DGSLAF+P++F++A GEKIVFKNNAG+PHNVVFDEDEIPSGVD 
Sbjct: 61  ALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDV 120

Query: 179 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 225
            KISMDE++LLN  GE YEV LTE G+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 AKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]

BLAST of PI0027008 vs. TAIR 10
Match: AT1G76100.1 (plastocyanin 1 )

HSP 1 Score: 228.4 bits (581), Expect = 5.7e-60
Identity = 126/174 (72.41%), Postives = 136/174 (78.16%), Query Frame = 0


Query: 59  MAAVTSAAVAIPSFTGLKSSSSSKP---------TSAIRLPSPASPKLTIRASLKDVGVA 118
           MAA+TSA V IPSFTGLK + SSKP         TSA R P    PKL +++SLKD GV 
Sbjct: 1   MAAITSATVTIPSFTGLKLAVSSKPKTLSTISRSTSATRAP----PKLALKSSLKDFGVI 60

Query: 119 VAATAASALLASNAMAIEILLGGDDGSLAFVPSNFTVASGEKIVFKNNAGFPHNVVFDED 178
             ATAAS +LA NAMA+E+LLG DDGSLAFVPS FTVA GEKIVFKNNAGFPHNVVFDED
Sbjct: 61  AVATAASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDED 120

Query: 179 EIPSGVDAGKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTV 224
           EIPSGVDA KISMDE  LLN  GE YEV LTE GSY FYC+PHQGAGMVGK+TV
Sbjct: 121 EIPSGVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170

The following BLAST results are available for this feature:

BLAST of PI0027008 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P00289	4.5e-62	75.60	Plastocyanin, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETE PE=1 SV=2	[more]
P17340	8.5e-61	73.53	Plastocyanin, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PETE PE=2 SV=1	[more]
P00299	2.5e-60	72.02	Plastocyanin A, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2	[more]
P42699	1.6e-59	72.46	Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DRT...	[more]
P11490	8.0e-59	72.41	Plastocyanin minor isoform, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PET...	[more]

BLAST of PI0027008 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VCJ5	5.0e-80	98.19	Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001440 ...	[more]
A0A5D3E5P8	2.5e-79	97.59	Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007720 ...	[more]
A0A1S3CRA6	2.5e-79	97.59	Plastocyanin OS=Cucumis melo OX=3656 GN=LOC103503851 PE=3 SV=1	[more]
A0A0A0LE99	1.0e-77	95.78	Plastocyanin OS=Cucumis sativus OX=3659 GN=Csa_3G875430 PE=3 SV=1	[more]
A0A6J1FAV0	1.6e-70	85.63	Plastocyanin OS=Cucurbita moschata OX=3662 GN=LOC111443648 PE=3 SV=1	[more]

BLAST of PI0027008 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063319.1	1.0e-79	98.19	plastocyanin [Cucumis melo var. makuwa]	[more]
XP_008466451.1	5.1e-79	97.59	PREDICTED: plastocyanin [Cucumis melo] >TYK31457.1 plastocyanin [Cucumis melo va...	[more]
XP_004136366.1	2.1e-77	95.78	plastocyanin-like [Cucumis sativus] >KGN60068.1 hypothetical protein Csa_001523 ...	[more]
XP_038896134.1	1.6e-72	90.42	plastocyanin [Benincasa hispida]	[more]
KAG6591248.1	1.9e-70	87.43	Plastocyanin major isoform, chloroplastic, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of PI0027008 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20340.1	1.1e-60	72.46	Cupredoxin superfamily protein	[more]
AT1G76100.1	5.7e-60	72.41	plastocyanin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001235	Blue (type 1) copper protein, plastocyanin-type	PRINTS	PR00156	COPPERBLUE	coord: 160..175 score: 55.62 coord: 201..215 score: 51.99 coord: 145..158 score: 40.5
IPR002387	Plastocyanin	PRINTS	PR00157	PLASTOCYANIN	coord: 154..172 score: 83.95 coord: 203..222 score: 80.37 coord: 131..150 score: 63.17
IPR002387	Plastocyanin	TIGRFAM	TIGR02656	TIGR02656	coord: 126..224 e-value: 2.4E-41 score: 138.2
IPR002387	Plastocyanin	CDD	cd04219	Plastocyanin	coord: 126..224 e-value: 1.45543E-51 score: 160.227
IPR000923	Blue (type 1) copper domain	PFAM	PF00127	Copper-bind	coord: 127..224 e-value: 7.2E-34 score: 116.2
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 126..224 e-value: 3.4E-29 score: 103.5
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 123..224
None	No IPR available	PANTHER	PTHR34192	PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATED	coord: 59..224
None	No IPR available	PANTHER	PTHR34192:SF11	PLASTOCYANIN	coord: 59..224
IPR028871	Blue (type 1) copper protein, binding site	PROSITE	PS00196	COPPER_BLUE	coord: 203..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0027008.1	PI0027008.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0009055	electron transfer activity