PI0026964 (gene) Melon (PI 482460) v1

Overview


Name	PI0026964
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	PRA1 family protein
Location	chr07: 21863423 .. 21865508 (+)
RNA-Seq Expression	PI0026964
Synteny	PI0026964

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTCTCATCCAACCCACTTTCCCTCAGCGTTCCAGACGCTGCTTTCGATTCATGGCTTCGCGATTCCGGTTACCTTGAAATTCTCGATCAGCGGACCTCTGACCTCCACCGCCATTCCTCTGCCACCGCAGCCGCTCCCCCCACCAGACCCACCCCTAACGCTGCACCTCCTTTAGCCACAGGTTTCTTCATCTCCCTCTTCTCTCGCATCGCGACCCTTCTCTCCATTTTTACTCTAAATCCCTTTGCCAAGCTCTCTGCTGCTGATTTTTCTGGCCCGACCCCTTCCTGGACTTCTGGGTTTGTTGGGTTTTTGAGTCCTATTCATTTCCTTCGTCGCCGGCTCAAGCTCGTCTTAGAGTCCACGAGAACGCCAAACGCTATGCTCGCAATTACGCTTCACTATTTGTTCTCTTCTTTGTCTGCACGCTGTATGTTCTTCTCTTTCTCTTGTCAATTGTCTTTACAGATGGGTGTGTGCTGCGGATTCTGGCCTTGTCGTTGAAGTGGTTGTCTTTCGTGGGGGTTGCGAATTGGGTTCTGTTTGGTTTTACTTGATGGGGATGGGAAGAGTAAGCTATGAAAACATCGATTTGTTAAAGCGTTTTGATTAAGATTCGATTATGTGTTTAGTGATTTGGTTTGATTTTTGAAGTTCGTGGGGCTTAAAACTTTTGGAGCCTAATCGATTGCTGATCCCAATGTGAAACATATAGAAAGAATGGCTTGCATTCCTTTTGTGGATTTAAGTGGTTTGACTGAACAGGGAACCACTGTTGTTGTTGGTCATTAAACTAGTAATAGAGTAGTGTTCTAGTTTTATGGCAATTTCCTTACTAGTTTATATATTCATGTTCCTTTATTTGGGATGAATGAGCGTTTGCATGGAATGAACATAAAAATGTTGGCTAGAGATTTATGGCAATTTCCCCGACCTTTATTTTACCAATTTCTTGTTTCTTAACTTTAAATTCTCATGTGGATGATTGCAGGTACCAGATGCCTCTTGCCCTCCTTGGACTGATATCATGTTTAGCACTTTGGGATGTTGTTAAATTTTGTTGTGATAGGTGGGGATTAGACAAATATCCAGTTCTTTGGCAGTGTTTGGTTCGCATTGCTCAATGTGGTATGTTACTGACGTTTTAAAACCGTGTTTATTTACACACCTGAGAGGTTCTCCCAATTGTTTCCTTTAAACATGTATTAGTTAATTGGTATTCTGTTTCATTGTTGCATTTTCACATAAAGAACTTCAGTTGAAAAATGATATCCGTAGAGATACAGATTACTATAGCATAGATCATCAGTGTAGATGTACAGTTTAGATCTCAAATTGAAAGCATACCAAGACGTTGGATTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTACTAGCTTTTTTTATGCGATCAGTGAGATATACACTGTAATTCCTGCTTGTTGAATGGTTATTGTTTTGCTTGTTCCATTTGGTTAAAGATTTCAAGCCTTAAGGTTATTGTTTTCTCAATTTAAGATGACTATCGATTGAGAACTTTAGCGCAGTTGTCCTTAGTTCTTGAAATGGAGCCAAGCTGATGAGTTGGCCAAGCGTGTAGGAAAGCATAATTCCTGCCTGTTTGATGCTGGAAATGTTTTACTTAGTACTACAAATGCCATTTGAAATCTTTGGAATTTTTTCAAAACCCTTCTTTTTGAGACAGCTTTGTGGGATTATTGGACGTAAAATTGGATCCTGCTGTATGCATTTATTCGTTGTTTTCATGTAAATTACCATCCGTGAGTTCACAATTGTTCGGACTGCTATTGTTATTTATTACATAGCATCTTAAATACTTAACAAGTATAATGTTTTGCAGTGACTGTTATCATCCTTTTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCCCTTGGCATTGGATATACAGTGACTTCAGAATTCTAGGCCATGTTACAGGGTTCATTATTATCAGTTGTCCTTACCACCTTTGAAATCTTGACAGGTATGATTTTGCATGCTGCATTTCGGAAGCTGACTCCCACCAAGCCCCCACCATCTACCGTAAGTCGGAAATAG

mRNA sequence

ATGAGTTTCTCATCCAACCCACTTTCCCTCAGCGTTCCAGACGCTGCTTTCGATTCATGGCTTCGCGATTCCGGTTACCTTGAAATTCTCGATCAGCGGACCTCTGACCTCCACCGCCATTCCTCTGCCACCGCAGCCGCTCCCCCCACCAGACCCACCCCTAACGCTGCACCTCCTTTAGCCACAGGTTTCTTCATCTCCCTCTTCTCTCGCATCGCGACCCTTCTCTCCATTTTTACTCTAAATCCCTTTGCCAAGCTCTCTGCTTCCTATTCATTTCCTTCGTCGCCGGCTCAAGCTCGTCTTAGAGTCCACGAGAACGCCAAACGCTATGCTCGCAATTACGCTTCACTATTTGTTCTCTTCTTTGTCTGCACGCTGTACCAGATGCCTCTTGCCCTCCTTGGACTGATATCATGTTTAGCACTTTGGGATGTTGTTAAATTTTGTTGTGATAGGTGGGGATTAGACAAATATCCAGTTCTTTGGCAGTGTTTGGTTCGCATTGCTCAATGTGTGACTGTTATCATCCTTTTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCCCTTGGCATTGGATATACAGGTTCATTATTATCAGTTGTCCTTACCACCTTTGAAATCTTGACAGGTATGATTTTGCATGCTGCATTTCGGAAGCTGACTCCCACCAAGCCCCCACCATCTACCGTAAGTCGGAAATAG

Coding sequence (CDS)

ATGAGTTTCTCATCCAACCCACTTTCCCTCAGCGTTCCAGACGCTGCTTTCGATTCATGGCTTCGCGATTCCGGTTACCTTGAAATTCTCGATCAGCGGACCTCTGACCTCCACCGCCATTCCTCTGCCACCGCAGCCGCTCCCCCCACCAGACCCACCCCTAACGCTGCACCTCCTTTAGCCACAGGTTTCTTCATCTCCCTCTTCTCTCGCATCGCGACCCTTCTCTCCATTTTTACTCTAAATCCCTTTGCCAAGCTCTCTGCTTCCTATTCATTTCCTTCGTCGCCGGCTCAAGCTCGTCTTAGAGTCCACGAGAACGCCAAACGCTATGCTCGCAATTACGCTTCACTATTTGTTCTCTTCTTTGTCTGCACGCTGTACCAGATGCCTCTTGCCCTCCTTGGACTGATATCATGTTTAGCACTTTGGGATGTTGTTAAATTTTGTTGTGATAGGTGGGGATTAGACAAATATCCAGTTCTTTGGCAGTGTTTGGTTCGCATTGCTCAATGTGTGACTGTTATCATCCTTTTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCCCTTGGCATTGGATATACAGGTTCATTATTATCAGTTGTCCTTACCACCTTTGAAATCTTGACAGGTATGATTTTGCATGCTGCATTTCGGAAGCTGACTCCCACCAAGCCCCCACCATCTACCGTAAGTCGGAAATAG

Protein sequence

MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAAPPTRPTPNAAPPLATGFFISLFSRIATLLSIFTLNPFAKLSASYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCCDRWGLDKYPVLWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTGSLLSVVLTTFEILTGMILHAAFRKLTPTKPPPSTVSRK

Homology

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BLAST of PI0026964 vs. ExPASy Swiss-Prot
Match: Q8LFP1 (PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 7.8e-57
Identity = 125/252 (49.60%), Postives = 161/252 (63.89%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATA-----AAPPTRPTPN 60
           M+FS NPLSLSVPD AF+SWLRDSGYLE+LD RTS     +S++A     AA  +  + +
Sbjct: 1   MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRTSAAAAAASSSASVSSSAAATSAASDD 60

Query: 61  AAPPLATGFFISLFSRIATLLSIFTLNPFAKLSA-------------------SYSFPSS 120
               +  GFF SL SR+ T+ S+ T+NPF+KLSA                   SYSFPSS
Sbjct: 61  VVSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDSYSFPSS 120

Query: 121 PAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCCDRWGL 180
             QAR+RVHEN KR+ARNYA+LF++FF C LYQMPLAL+GL+  LALW++ K+C D+W  
Sbjct: 121 SQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKF 180

Query: 181 DKYPVLWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTGSLLSVVLTTFEILTGMILH 229
           D++P + +  + I QC T ++L F N QMA+F AL I Y               + MILH
Sbjct: 181 DRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISY---------------SVMILH 237

[Close]

BLAST of PI0026964 vs. ExPASy TrEMBL
Match: A0A1S3CLE4 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 7.5e-103
Identity = 208/254 (81.89%), Postives = 212/254 (83.46%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAAPPTRPTPNAAPPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS   AAPPTRPTP AA PL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS---AAPPTRPTPTAAAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSA-------------------SYSFPSSPAQAR 120
           ATGFFISLFSRIATLLS+FTLNPF+KLSA                   SYSFPSSPAQAR
Sbjct: 61  ATGFFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWD+VKFCCDRWGLDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180

Query: 181 LWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTGSLLSVVLTTFEILTGMILHAAFRK 236
           LWQCLVRIAQC T IILLFSNFQMAIFCALGIGY               TGMILHAAFRK
Sbjct: 181 LWQCLVRIAQCATAIILLFSNFQMAIFCALGIGY---------------TGMILHAAFRK 235

[Close]

BLAST of PI0026964 vs. ExPASy TrEMBL
Match: A0A0A0L4P4 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G630550 PE=3 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.2e-102
Identity = 210/254 (82.68%), Postives = 211/254 (83.07%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAAPPTRPTPNAAPPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS   AAPP RPTP AA PL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS---AAPPARPTPTAAAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSA-------------------SYSFPSSPAQAR 120
           ATGFFISLFSRIATLLSIFTLNPFAKLSA                   SYSFPSSPAQAR
Sbjct: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWD+VKFCCDRWGLDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180

Query: 181 LWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTGSLLSVVLTTFEILTGMILHAAFRK 236
           LWQCLVRIAQC TVIILLFSNFQMAIFCALGIGY               TGMILHAAFRK
Sbjct: 181 LWQCLVRIAQCATVIILLFSNFQMAIFCALGIGY---------------TGMILHAAFRK 235

[Close]

BLAST of PI0026964 vs. ExPASy TrEMBL
Match: A0A6J1IMK5 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111476927 PE=3 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.3e-99
Identity = 200/254 (78.74%), Postives = 209/254 (82.28%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAAPPTRPTPNAAPPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAA  PTRPTP A  PL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPTAVAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSA-------------------SYSFPSSPAQAR 120
           ATGFFIS FSRI TLLS+FTLNPFAKLSA                   SYSFPSSPAQAR
Sbjct: 61  ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL+SCLALWD+VKFC DRW LDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWALDKYPV 180

Query: 181 LWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTGSLLSVVLTTFEILTGMILHAAFRK 236
           +WQCLVRIAQCVTVIILLFSNFQMAIFCALG+GY               TGMILHAAFRK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGY---------------TGMILHAAFRK 238

[Close]

BLAST of PI0026964 vs. ExPASy TrEMBL
Match: A0A6J1F5I6 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111442551 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.9e-99
Identity = 200/254 (78.74%), Postives = 210/254 (82.68%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAAPPTRPTPNAAPPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAA  PTRPTP A  PL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPIAVAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSA-------------------SYSFPSSPAQAR 120
           ATGFFIS FSRI TLLS+FTLNPFAKLSA                   SYSFPSSPAQAR
Sbjct: 61  ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL+SCLALWD+VKFC DRWGLD+YPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDQYPV 180

Query: 181 LWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTGSLLSVVLTTFEILTGMILHAAFRK 236
           +WQCLVRIAQCVTVIILLFSNFQMAIFCALG+GY               TGMILHAAFRK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGY---------------TGMILHAAFRK 238

[Close]

BLAST of PI0026964 vs. ExPASy TrEMBL
Match: A0A5A7VNH6 (PRA1 family protein H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001700 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.8e-97
Identity = 208/291 (71.48%), Postives = 212/291 (72.85%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAAPPTRPTPNAAPPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS   AAPPTRPTP AA PL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS---AAPPTRPTPTAAAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSA-------------------SYSFPSSPAQAR 120
           ATGFFISLFSRIATLLS+FTLNPF+KLSA                   SYSFPSSPAQAR
Sbjct: 61  ATGFFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCT----------------------------------- 180
           LRVHENAKRYARNYASLFVLFFVCT                                   
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYVLLFLLLIVSIDGLFAADSGLTLKLLYFLEVVN 180

Query: 181 --LYQMPLALLGLISCLALWDVVKFCCDRWGLDKYPVLWQCLVRIAQCVTVIILLFSNFQ 236
             LYQMPLALLGLISCLALWD+VKFCCDRWGLDKYPVLWQCLVRIAQC T IILLFSNFQ
Sbjct: 181 WVLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATAIILLFSNFQ 240

[Close]

BLAST of PI0026964 vs. NCBI nr
Match: XP_008463685.1 (PREDICTED: PRA1 family protein H [Cucumis melo] >XP_008463686.1 PREDICTED: PRA1 family protein H [Cucumis melo])

HSP 1 Score: 383.3 bits (983), Expect = 1.5e-102
Identity = 208/254 (81.89%), Postives = 212/254 (83.46%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAAPPTRPTPNAAPPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS   AAPPTRPTP AA PL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS---AAPPTRPTPTAAAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSA-------------------SYSFPSSPAQAR 120
           ATGFFISLFSRIATLLS+FTLNPF+KLSA                   SYSFPSSPAQAR
Sbjct: 61  ATGFFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWD+VKFCCDRWGLDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180

Query: 181 LWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTGSLLSVVLTTFEILTGMILHAAFRK 236
           LWQCLVRIAQC T IILLFSNFQMAIFCALGIGY               TGMILHAAFRK
Sbjct: 181 LWQCLVRIAQCATAIILLFSNFQMAIFCALGIGY---------------TGMILHAAFRK 235

[Close]

BLAST of PI0026964 vs. NCBI nr
Match: XP_004146052.1 (PRA1 family protein H [Cucumis sativus] >XP_004146053.1 PRA1 family protein H [Cucumis sativus] >KGN55111.1 hypothetical protein Csa_012113 [Cucumis sativus])

HSP 1 Score: 381.7 bits (979), Expect = 4.5e-102
Identity = 210/254 (82.68%), Postives = 211/254 (83.07%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAAPPTRPTPNAAPPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS   AAPP RPTP AA PL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS---AAPPARPTPTAAAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSA-------------------SYSFPSSPAQAR 120
           ATGFFISLFSRIATLLSIFTLNPFAKLSA                   SYSFPSSPAQAR
Sbjct: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWD+VKFCCDRWGLDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180

Query: 181 LWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTGSLLSVVLTTFEILTGMILHAAFRK 236
           LWQCLVRIAQC TVIILLFSNFQMAIFCALGIGY               TGMILHAAFRK
Sbjct: 181 LWQCLVRIAQCATVIILLFSNFQMAIFCALGIGY---------------TGMILHAAFRK 235

[Close]

BLAST of PI0026964 vs. NCBI nr
Match: KAG6591944.1 (PRA1 family protein H, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024817.1 PRA1 family protein H [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 374.4 bits (960), Expect = 7.2e-100
Identity = 202/254 (79.53%), Postives = 211/254 (83.07%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAAPPTRPTPNAAPPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAA PTRPTP A  PL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAAAPTRPTPIAVAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSA-------------------SYSFPSSPAQAR 120
           ATGFFIS FSRI TLLS+FTLNPFAKLSA                   SYSFPSSPAQAR
Sbjct: 61  ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL+SCLALWD+VKFC DRWGLDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDKYPV 180

Query: 181 LWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTGSLLSVVLTTFEILTGMILHAAFRK 236
           +WQCLVRIAQCVTVIILLFSNFQMAIFCALG+GY               TGMILHAAFRK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGY---------------TGMILHAAFRK 238

[Close]

BLAST of PI0026964 vs. NCBI nr
Match: XP_038898448.1 (PRA1 family protein H [Benincasa hispida])

HSP 1 Score: 374.4 bits (960), Expect = 7.2e-100
Identity = 207/254 (81.50%), Postives = 209/254 (82.28%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAAPPTRPTPNAAPPL 60
           MSFS NPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSA AAA PTRPTP AA PL
Sbjct: 1   MSFSPNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAPAAAAPTRPTPAAAAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSA-------------------SYSFPSSPAQAR 120
           ATGFFISLFSR+ TLLSIFTLNPFAKLSA                   SYSFPSSPAQAR
Sbjct: 61  ATGFFISLFSRMGTLLSIFTLNPFAKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFC DRWGLDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCGDRWGLDKYPV 180

Query: 181 LWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTGSLLSVVLTTFEILTGMILHAAFRK 236
           LWQCLVRIAQCVTVIILLF NFQMAIFCALGIGY               TGMILHAAFRK
Sbjct: 181 LWQCLVRIAQCVTVIILLFCNFQMAIFCALGIGY---------------TGMILHAAFRK 238

[Close]

BLAST of PI0026964 vs. NCBI nr
Match: XP_023535020.1 (PRA1 family protein H-like [Cucurbita pepo subsp. pepo] >XP_023535022.1 PRA1 family protein H-like [Cucurbita pepo subsp. pepo] >XP_023535023.1 PRA1 family protein H-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 371.7 bits (953), Expect = 4.7e-99
Identity = 200/254 (78.74%), Postives = 209/254 (82.28%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAAPPTRPTPNAAPPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAA  PTRPTP A  PL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPTAVAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSA-------------------SYSFPSSPAQAR 120
           ATGFFIS FSRI TLLS+FTLNPFAKLSA                   SYSFPSSPAQAR
Sbjct: 61  ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL+SCLALWD+VKFC DRWGLDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDKYPV 180

Query: 181 LWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTGSLLSVVLTTFEILTGMILHAAFRK 236
           +WQCLVRIAQCVTVIILLFSNFQMAIFCAL +GY               TGMILHAAFRK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALAVGY---------------TGMILHAAFRK 238

[Close]

BLAST of PI0026964 vs. TAIR 10
Match: AT4G27540.1 (prenylated RAB acceptor 1.H )

HSP 1 Score: 221.9 bits (564), Expect = 5.6e-58
Identity = 125/252 (49.60%), Postives = 161/252 (63.89%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATA-----AAPPTRPTPN 60
           M+FS NPLSLSVPD AF+SWLRDSGYLE+LD RTS     +S++A     AA  +  + +
Sbjct: 1   MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRTSAAAAAASSSASVSSSAAATSAASDD 60

Query: 61  AAPPLATGFFISLFSRIATLLSIFTLNPFAKLSA-------------------SYSFPSS 120
               +  GFF SL SR+ T+ S+ T+NPF+KLSA                   SYSFPSS
Sbjct: 61  VVSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDSYSFPSS 120

Query: 121 PAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCCDRWGL 180
             QAR+RVHEN KR+ARNYA+LF++FF C LYQMPLAL+GL+  LALW++ K+C D+W  
Sbjct: 121 SQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKF 180

Query: 181 DKYPVLWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTGSLLSVVLTTFEILTGMILH 229
           D++P + +  + I QC T ++L F N QMA+F AL I Y               + MILH
Sbjct: 181 DRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISY---------------SVMILH 237

The following BLAST results are available for this feature:

BLAST of PI0026964 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFP1	7.8e-57	49.60	PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1	[more]

BLAST of PI0026964 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CLE4	7.5e-103	81.89	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1	[more]
A0A0A0L4P4	2.2e-102	82.68	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G630550 PE=3 SV=1	[more]
A0A6J1IMK5	2.3e-99	78.74	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111476927 PE=3 SV=1	[more]
A0A6J1F5I6	2.9e-99	78.74	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111442551 PE=3 SV=1	[more]
A0A5A7VNH6	2.8e-97	71.48	PRA1 family protein H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold38...	[more]

BLAST of PI0026964 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463685.1	1.5e-102	81.89	PREDICTED: PRA1 family protein H [Cucumis melo] >XP_008463686.1 PREDICTED: PRA1 ...	[more]
XP_004146052.1	4.5e-102	82.68	PRA1 family protein H [Cucumis sativus] >XP_004146053.1 PRA1 family protein H [C...	[more]
KAG6591944.1	7.2e-100	79.53	PRA1 family protein H, partial [Cucurbita argyrosperma subsp. sororia] >KAG70248...	[more]
XP_038898448.1	7.2e-100	81.50	PRA1 family protein H [Benincasa hispida]	[more]
XP_023535020.1	4.7e-99	78.74	PRA1 family protein H-like [Cucurbita pepo subsp. pepo] >XP_023535022.1 PRA1 fam...	[more]

BLAST of PI0026964 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27540.1	5.6e-58	49.60	prenylated RAB acceptor 1.H	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 84..221 e-value: 1.7E-10 score: 40.7
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..84
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 87..228
None	No IPR available	PANTHER	PTHR19317:SF1	PRA1 FAMILY PROTEIN H	coord: 87..228 coord: 1..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0026964.1	PI0026964.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane