PI0026323 (gene) Melon (PI 482460) v1

Overview
NamePI0026323
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr12: 15904430 .. 15906543 (-)
RNA-Seq ExpressionPI0026323
SyntenyPI0026323
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTCCAGCTCTGCCATTCCCCACCCACCTTCTTCACCGACCACCATTCTCTTTCCAATTCTCTCATTCCTCAACGTAAAACAACTCTCTCCAACTCCTCTCCTCTTTTCAAGCTCAATCCCATTCCTCGTCACTCAAAACCATTCCTCCAAATTACCAATGTCTCGCTGCAGGAACACGCTCCTCAAGAAACCCAAAATACAATTCCCTCTGATGATGAAATCTCCAAATACCCAGATGCGAAATCCGGTTCCTCCTCCAAAAGCTCCGTCTGGGTCAATCCTAGAAGCCCCAGAGCTTCCAAACTTCGGAAGCAGTCGTACGAAGCAAGGTATACTTCTCTTATTAGAATATCGGAGTCTTTAGACTCTTGTAATCCATGTGAGGTAGATGTTGCTGATGTCTTGAAGGTGATAGGTAATAACATTTTAGAACAGGACGCTATTGTAGTGCTGAATAACATGTCAAATTCCCAAACTGCGTTGCTTGCTCTTCGCTACTTCCAGCATATGCTGAAATCAAGTAAACAGACGATTTTTATAATGTGACACTGAAGGTGTTTAGGAAGTGCAGAGATATGGAGGGTGCAGAGAAACTGTTCGAAGAAATGCTTAACAGAGGAGTTAAGCCTGATAATGTGACATTTTCTACAATTATTAGTTGTGCTAGGTTGTGTTCTTTACCAAATAAGGCTGTTGAGTGGTTTGAGAAGATGCCAAGTTTTGACTGTAATCCTGATGATGTTACTTACTCTACGATGATTGATGCCTATGGACGTGCTGGTAATGTTGACATGGCTTTTAGTTTGTATGACCGTGCAAGAACAGAAAACTGGCGTATTGATCCTGCGACATTCTCGACAATGATCAAAATTCATGGAGTGGCTGGGAACTATGATGGGTGCTTGAATGTTTATGAAGAAATGAAGGCTATAGGCATCAAGCCAAACTTGGTTATATATAACAGCTTGTTGGATGCTATGGGTAGGGCTAAAAGACCTTGGCAGATCAAGACCATTTACAAAGAGATGATTAAAAATGGATTTTCACCAAGTTGGGCAACTTATGCTTCTCTTTTACGTGCCTATGGAAGAGCCAGGTATGGTGAGGATGCTCTCCTTGTTTACAAGGAGATGAAGGAAAAAGGACTGCAGTTAAACGTAATTCTCTACAATACACTTTTAGCTATGTGTGCTGATGTTGGCTACGTTAATGAGGCTGTTGAAATTTTTCAAGATATGAAGAGATCTGGGACTTGCTCACCTGACAGTTGGACATTTTCTTCCATGATCACCATATATTCCTGCAGTGGAAAAGTATCAGAGGCTGAAGAAATGTTGAACGATATGGTGGAAGCTGGTTTTGACCCTAATATCTTTGTCTTAACATCACTAATCCAGTGCTACGGGAAAGCCAAACGTGTTGATGATGTAGTGAGGACATTCAATCGATTGATAGAGTTGGGATTAACTCCAGACGATCGTTTCTGTGGCTGCCTTCTCAATGTGATTACCCAGACGCCAAAAGAGGAACTTAGTAAGCTGATTGATTGTGTTGTGAGAGCTAATCCAAAACTCGGGTTTGTGGTTGAACTCTTGCTAGGGGAGCAAGACAAGGAAGGAAATTTCAGAACTGAAGCCTCAGAACTCTTTAGTGTTGTCAGTGCTGATGTGAGAAAAGCCTACTGCAATTGCTTAATTGATCTCTGTGTAAATTTAGATCTTTTGGATAAGGCATGTGAACTACTGGATTTGGGGCTTACACTTCAGATATATAAAGATTTGCAGTCCAGGTCTCCAACTCAGTGGTCTCTTTATCTTAAGGGTCTTTCTCTTGGGGCTGCTCTCACTGCATTACACGTTTGGATAAATGACTTAACAAAGGTACTCGATTCCGGGGAGGAACTTCCACCATTACTTGGAATAAATACTGGACATGGAAAACACAAGTATTCAGATAAGGGTTTGGCAAGCGTCTTTGAATCACATTTAAAGGAATTAAATGCTCCATTCCATGAGGCTCCAGAAAAGGTCGGATGGTTTTTGACGACTAAAGTGGCAGCAAAATCATGGTTGGAGTATAGAAGTTCACCTGAATTGGTTGCAGCGTAG

mRNA sequence

ATGGCGTTCCAGCTCTGCCATTCCCCACCCACCTTCTTCACCGACCACCATTCTCTTTCCAATTCTCTCATTCCTCAACGTAAAACAACTCTCTCCAACTCCTCTCCTCTTTTCAAGCTCAATCCCATTCCTCGTCACTCAAAACCATTCCTCCAAATTACCAATGTCTCGCTGCAGGAACACGCTCCTCAAGAAACCCAAAATACAATTCCCTCTGATGATGAAATCTCCAAATACCCAGATGCGAAATCCGGTTCCTCCTCCAAAAGCTCCGTCTGGGTCAATCCTAGAAGCCCCAGAGCTTCCAAACTTCGGAAGCAGTCGTACGAAGCAAGGTATACTTCTCTTATTAGAATATCGGAGTCTTTAGACTCTTGTAATCCATGTGAGGTAGATGTTGCTGATGTCTTGAAGGTGATAGGTAATAACATTTTAGAACAGGACGCTATTGTAGTGCTGAATAACATGTCAAATTCCCAAACTGCGTTGCTTGCTCTTCGCTACTTCCAGCATATGCTGAAATCAAGTAAACAGACGATTTTTATAATAGATATGGAGGGTGCAGAGAAACTGTTCGAAGAAATGCTTAACAGAGGAGTTAAGCCTGATAATGTGACATTTTCTACAATTATTAGTTGTGCTAGGTTGTGTTCTTTACCAAATAAGGCTGTTGAGTGGTTTGAGAAGATGCCAAGTTTTGACTGTAATCCTGATGATGTTACTTACTCTACGATGATTGATGCCTATGGACGTGCTGGTAATGTTGACATGGCTTTTAGTTTGTATGACCGTGCAAGAACAGAAAACTGGCGTATTGATCCTGCGACATTCTCGACAATGATCAAAATTCATGGAGTGGCTGGGAACTATGATGGGTGCTTGAATGTTTATGAAGAAATGAAGGCTATAGGCATCAAGCCAAACTTGGTTATATATAACAGCTTGTTGGATGCTATGGGTAGGGCTAAAAGACCTTGGCAGATCAAGACCATTTACAAAGAGATGATTAAAAATGGATTTTCACCAAGTTGGGCAACTTATGCTTCTCTTTTACGTGCCTATGGAAGAGCCAGGTATGGTGAGGATGCTCTCCTTGTTTACAAGGAGATGAAGGAAAAAGGACTGCAGTTAAACGTAATTCTCTACAATACACTTTTAGCTATGTGTGCTGATGTTGGCTACGTTAATGAGGCTGTTGAAATTTTTCAAGATATGAAGAGATCTGGGACTTGCTCACCTGACAGTTGGACATTTTCTTCCATGATCACCATATATTCCTGCAGTGGAAAAGTATCAGAGGCTGAAGAAATGTTGAACGATATGGTGGAAGCTGGTTTTGACCCTAATATCTTTGTCTTAACATCACTAATCCAGTGCTACGGGAAAGCCAAACGTGTTGATGATGTAGTGAGGACATTCAATCGATTGATAGAGTTGGGATTAACTCCAGACGATCGTTTCTGTGGCTGCCTTCTCAATGTGATTACCCAGACGCCAAAAGAGGAACTTAGTAAGCTGATTGATTGTGTTGTGAGAGCTAATCCAAAACTCGGGTTTGTGGTTGAACTCTTGCTAGGGGAGCAAGACAAGGAAGGAAATTTCAGAACTGAAGCCTCAGAACTCTTTAGTGTTGTCAGTGCTGATGTGAGAAAAGCCTACTGCAATTGCTTAATTGATCTCTGTGTAAATTTAGATCTTTTGGATAAGGCATGTGAACTACTGGATTTGGGGCTTACACTTCAGATATATAAAGATTTGCAGTCCAGGTCTCCAACTCAGTGGTCTCTTTATCTTAAGGGTCTTTCTCTTGGGGCTGCTCTCACTGCATTACACGTTTGGATAAATGACTTAACAAAGGTACTCGATTCCGGGGAGGAACTTCCACCATTACTTGGAATAAATACTGGACATGGAAAACACAAGTATTCAGATAAGGGTTTGGCAAGCGTCTTTGAATCACATTTAAAGGAATTAAATGCTCCATTCCATGAGGCTCCAGAAAAGGTCGGATGGTTTTTGACGACTAAAGTGGCAGCAAAATCATGGTTGGAGTATAGAAGTTCACCTGAATTGGTTGCAGCGTAG

Coding sequence (CDS)

ATGGCGTTCCAGCTCTGCCATTCCCCACCCACCTTCTTCACCGACCACCATTCTCTTTCCAATTCTCTCATTCCTCAACGTAAAACAACTCTCTCCAACTCCTCTCCTCTTTTCAAGCTCAATCCCATTCCTCGTCACTCAAAACCATTCCTCCAAATTACCAATGTCTCGCTGCAGGAACACGCTCCTCAAGAAACCCAAAATACAATTCCCTCTGATGATGAAATCTCCAAATACCCAGATGCGAAATCCGGTTCCTCCTCCAAAAGCTCCGTCTGGGTCAATCCTAGAAGCCCCAGAGCTTCCAAACTTCGGAAGCAGTCGTACGAAGCAAGGTATACTTCTCTTATTAGAATATCGGAGTCTTTAGACTCTTGTAATCCATGTGAGGTAGATGTTGCTGATGTCTTGAAGGTGATAGGTAATAACATTTTAGAACAGGACGCTATTGTAGTGCTGAATAACATGTCAAATTCCCAAACTGCGTTGCTTGCTCTTCGCTACTTCCAGCATATGCTGAAATCAAGTAAACAGACGATTTTTATAATAGATATGGAGGGTGCAGAGAAACTGTTCGAAGAAATGCTTAACAGAGGAGTTAAGCCTGATAATGTGACATTTTCTACAATTATTAGTTGTGCTAGGTTGTGTTCTTTACCAAATAAGGCTGTTGAGTGGTTTGAGAAGATGCCAAGTTTTGACTGTAATCCTGATGATGTTACTTACTCTACGATGATTGATGCCTATGGACGTGCTGGTAATGTTGACATGGCTTTTAGTTTGTATGACCGTGCAAGAACAGAAAACTGGCGTATTGATCCTGCGACATTCTCGACAATGATCAAAATTCATGGAGTGGCTGGGAACTATGATGGGTGCTTGAATGTTTATGAAGAAATGAAGGCTATAGGCATCAAGCCAAACTTGGTTATATATAACAGCTTGTTGGATGCTATGGGTAGGGCTAAAAGACCTTGGCAGATCAAGACCATTTACAAAGAGATGATTAAAAATGGATTTTCACCAAGTTGGGCAACTTATGCTTCTCTTTTACGTGCCTATGGAAGAGCCAGGTATGGTGAGGATGCTCTCCTTGTTTACAAGGAGATGAAGGAAAAAGGACTGCAGTTAAACGTAATTCTCTACAATACACTTTTAGCTATGTGTGCTGATGTTGGCTACGTTAATGAGGCTGTTGAAATTTTTCAAGATATGAAGAGATCTGGGACTTGCTCACCTGACAGTTGGACATTTTCTTCCATGATCACCATATATTCCTGCAGTGGAAAAGTATCAGAGGCTGAAGAAATGTTGAACGATATGGTGGAAGCTGGTTTTGACCCTAATATCTTTGTCTTAACATCACTAATCCAGTGCTACGGGAAAGCCAAACGTGTTGATGATGTAGTGAGGACATTCAATCGATTGATAGAGTTGGGATTAACTCCAGACGATCGTTTCTGTGGCTGCCTTCTCAATGTGATTACCCAGACGCCAAAAGAGGAACTTAGTAAGCTGATTGATTGTGTTGTGAGAGCTAATCCAAAACTCGGGTTTGTGGTTGAACTCTTGCTAGGGGAGCAAGACAAGGAAGGAAATTTCAGAACTGAAGCCTCAGAACTCTTTAGTGTTGTCAGTGCTGATGTGAGAAAAGCCTACTGCAATTGCTTAATTGATCTCTGTGTAAATTTAGATCTTTTGGATAAGGCATGTGAACTACTGGATTTGGGGCTTACACTTCAGATATATAAAGATTTGCAGTCCAGGTCTCCAACTCAGTGGTCTCTTTATCTTAAGGGTCTTTCTCTTGGGGCTGCTCTCACTGCATTACACGTTTGGATAAATGACTTAACAAAGGTACTCGATTCCGGGGAGGAACTTCCACCATTACTTGGAATAAATACTGGACATGGAAAACACAAGTATTCAGATAAGGGTTTGGCAAGCGTCTTTGAATCACATTTAAAGGAATTAAATGCTCCATTCCATGAGGCTCCAGAAAAGGTCGGATGGTTTTTGACGACTAAAGTGGCAGCAAAATCATGGTTGGAGTATAGAAGTTCACCTGAATTGGTTGCAGCGTAG

Protein sequence

MAFQLCHSPPTFFTDHHSLSNSLIPQRKTTLSNSSPLFKLNPIPRHSKPFLQITNVSLQEHAPQETQNTIPSDDEISKYPDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLIRISESLDSCNPCEVDVADVLKVIGNNILEQDAIVVLNNMSNSQTALLALRYFQHMLKSSKQTIFIIDMEGAEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKRSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNRLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVELLLGEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLDSGEELPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSSPELVAA
Homology
[Close]
BLAST of PI0026323 vs. ExPASy Swiss-Prot
Match: Q8GWE0 (Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P67 PE=1 SV=3)

HSP 1 Score: 903.7 bits (2334), Expect = 1.3e-261
Identity = 451/702 (64.25%), Postives = 549/702 (78.21%), Query Frame = 0 

Query: 5   LCHSPPTFFTDHHSLSNSLIPQRKTTLSNSSPLFKLNPIPRHSKPFLQITNVSLQEHAPQ 64
           LC SP +   D   L N L    K+T  +    +  N    HS+  LQ T+VS+QE  PQ
Sbjct: 6   LCSSPSSLLHDPLPLCNLLSVYPKSTPRSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQ 65

Query: 65  ETQNTIPSDDEISKYPDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLIRISESLD 124
             ++ +   D     P A     SKS VWVNP+SPRAS+LR++SY++RY+SLI+++ESLD
Sbjct: 66  SEKSKLVDVDLPIPEPTA-----SKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLD 125

Query: 125 SCNPCEVDVADVLKVIGNNILEQDAIVVLNNMSNSQTALLALRYFQHMLKSSKQTIFI-- 184
           +C P E DV DV+   G  + EQDA+V LNNM+N +TA L L      +K S++ I    
Sbjct: 126 ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 185

Query: 185 --------IDMEGAEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFD 244
                    D+E +EKLF+EML RG+KPDN TF+TIISCAR   +P +AVEWFEKM SF 
Sbjct: 186 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFG 245

Query: 245 CNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCL 304
           C PD+VT + MIDAYGRAGNVDMA SLYDRARTE WRID  TFST+I+I+GV+GNYDGCL
Sbjct: 246 CEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCL 305

Query: 305 NVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAY 364
           N+YEEMKA+G+KPNLVIYN L+D+MGRAKRPWQ K IYK++I NGF+P+W+TYA+L+RAY
Sbjct: 306 NIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 365

Query: 365 GRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKRSGTCSPD 424
           GRARYG+DAL +Y+EMKEKGL L VILYNTLL+MCAD  YV+EA EIFQDMK   TC PD
Sbjct: 366 GRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPD 425

Query: 425 SWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFN 484
           SWTFSS+IT+Y+CSG+VSEAE  L  M EAGF+P +FVLTS+IQCYGKAK+VDDVVRTF+
Sbjct: 426 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 485

Query: 485 RLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVELLLGEQD-KEGN 544
           +++ELG+TPDDRFCGCLLNV+TQTP EE+ KLI CV +A PKLG VV++L+ EQ+ +EG 
Sbjct: 486 QVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGV 545

Query: 545 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRSPTQ 604
           F+ EASEL   + +DV+KAY NCLIDLCVNL+ L++ACE+L LGL   IY  LQS+S TQ
Sbjct: 546 FKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQ 605

Query: 605 WSLYLKGLSLGAALTALHVWINDLTK-VLDSGEELPPLLGINTGHGKHKYSDKGLASVFE 664
           WSL+LK LSLGAALTALHVW+NDL++  L+SGEE PPLLGINTGHGKHKYSDKGLA+VFE
Sbjct: 606 WSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFE 665

Query: 665 SHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSSPELVAA 695
           SHLKELNAPFHEAP+KVGWFLTT VAAK+WLE R S   V+A
Sbjct: 666 SHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702

[Close]
BLAST of PI0026323 vs. ExPASy Swiss-Prot
Match: Q10PZ4 (Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0215900 PE=3 SV=1)

HSP 1 Score: 693.7 bits (1789), Expect = 2.1e-198
Identity = 358/665 (53.83%), Postives = 462/665 (69.47%), Query Frame = 0 

Query: 44  PRHSKPFLQITNVSLQEHAPQETQNTIPSDDEISKYPDAKSGSSSKSSVWVNPRSPRASK 103
           P++  P      VS+Q+  P       PSD      P     S++   VWVNP SPRA+ 
Sbjct: 21  PKNPSPSPATARVSVQDPPPP------PSDAN----PSPGRSSNTSRYVWVNPNSPRAAG 80

Query: 104 L-RKQSYEARYTSLIRISESLDSCNPCEVDVADVLK-VIGNNILEQDAIVVLNNMSNSQT 163
           L R ++   R   L   + +L +C   E  VA  L+        EQDA++VLN  S    
Sbjct: 81  LARARAGSGRRARLAAAAAALAACEAGEAPVAAALEAAFPEPPSEQDAVIVLNTTSARPA 140

Query: 164 A-LLALRYFQHMLKSSKQTI-FIIDMEG---------AEKLFEEMLNRGVKPDNVTFSTI 223
           A +LAL +F    +  K+ I + + ++          AE L+EEML  GV+PDN TFST+
Sbjct: 141 AVVLALWWFLRNAEVRKEVILYNVALKALRKRRRWSDAEALWEEMLREGVQPDNATFSTV 200

Query: 224 ISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENW 283
           ISCAR C +P KAVEWFEKMP F C+PD +TYS +IDAYGRAG+ + A  LYDRAR E W
Sbjct: 201 ISCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYGRAGDAETALRLYDRARAEKW 260

Query: 284 RIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKT 343
           ++DP   +T+I++H  +GN+DG LNV+EEMKA G+KPNLV+YN++LDAMGRA RPW +KT
Sbjct: 261 QLDPVICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYNTVLDAMGRAMRPWVVKT 320

Query: 344 IYKEMIKNGFSPSWATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCA 403
           I++E++     P+ ATY  LL AY RARYGEDA+ VY+ MK++ + ++V+LYN LL+MCA
Sbjct: 321 IHRELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVMKDEVMDIDVVLYNMLLSMCA 380

Query: 404 DVGYVNEAVEIFQDMKRS--GTCSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDP 463
           D+GYV EA EIF+DMK S      PDSW++SSM+T+YSC+G V+ AE +LN+MVEAGF P
Sbjct: 381 DIGYVEEAEEIFRDMKASMDSRSKPDSWSYSSMVTLYSCTGNVAGAEGILNEMVEAGFKP 440

Query: 464 NIFVLTSLIQCYGKAKRVDDVVRTFNRLIELGLTPDDRFCGCLLNVITQTPKEELSKLID 523
           NIF+LTSLI+CYGKA R DDVVR+F  L +LG+TPDDRFCGCLL V   TP +EL K+I 
Sbjct: 441 NIFILTSLIRCYGKAGRTDDVVRSFAMLEDLGITPDDRFCGCLLTVAAGTPADELGKVIG 500

Query: 524 CVVRANPKLGFVVELLLGEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLD 583
           C+ R++ +LG VV LL+         R  A EL       VR  YCNCL+DL VNL  ++
Sbjct: 501 CIDRSSAQLGAVVRLLVDAAAPSEPLREAAGELLGGARGVVRMPYCNCLMDLAVNLSQME 560

Query: 584 KACELLDLGLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLDSGEELP 643
           KAC LLD+ L L IY ++Q+R+ TQWSL+L+GLS+GAALT LHVW++DL   L +G+ELP
Sbjct: 561 KACALLDVALRLGIYSNVQTRTQTQWSLHLRGLSVGAALTTLHVWMSDLYAALQAGDELP 620

Query: 644 PLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSS 694
           PLLGI+TG GK+ YS KGLA+VFESHLKEL+APFHEAP+K GWFLTT VAA+ WLE + S
Sbjct: 621 PLLGIHTGQGKNTYSYKGLATVFESHLKELDAPFHEAPDKAGWFLTTSVAARHWLETKKS 675

[Close]
BLAST of PI0026323 vs. ExPASy Swiss-Prot
Match: B4F8Z1 (Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4577 GN=ATP4 PE=2 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 1.0e-197
Identity = 368/709 (51.90%), Postives = 480/709 (67.70%), Query Frame = 0 

Query: 5   LCHSPPTFFTD--HHSLSNSLIPQRKTTLSNSSPLFKLNPIPRHSKPFLQITNVSLQEHA 64
           LC SP +      H  +S S  P+  +           +P+  H         VS+QE  
Sbjct: 6   LCRSPSSLLPSWPHRPISASFNPKNPS-----------SPVAAH---------VSVQETP 65

Query: 65  PQETQNTIPSDDEISKYPDAKSGSSSKSS--VWVNPRSPRASKL-RKQSYEARYTSLIRI 124
           PQ    + PSD      P+    SSS ++  +WVNP SPRA+ + R ++   R   L   
Sbjct: 66  PQPQDPSPPSDSN----PNGTRPSSSSNTRFLWVNPNSPRAADVARARAGSGRRARLASA 125

Query: 125 SESLDSCNPCEVDVADVLK-VIGNNILEQDAIVVLNN--MSNSQTALLALRYFQHMLKSS 184
           + +L +C   E  V   L+        EQDA++VLN    + ++TA+LALR+F    K  
Sbjct: 126 AAALGACETTESAVEAALQAAFPEPPSEQDAVIVLNTAAATRAETAVLALRWFLGNAKVR 185

Query: 185 KQTIF---IIDM-------EGAEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPNKAVEW 244
           K+ I    ++ +          E L+ EML  GV+PDN TFST+ISCAR C L +KAVEW
Sbjct: 186 KKVILYNVVLKLLRKKRLWSETEALWAEMLRDGVQPDNATFSTVISCARACGLHSKAVEW 245

Query: 245 FEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGV 304
           F+KMP F C+PD +TYS +IDAYG AGN + A  LYDRAR E W++DP   ST+IK+H  
Sbjct: 246 FDKMPEFGCSPDMLTYSAVIDAYGHAGNSEAALRLYDRARAEKWQLDPVICSTVIKVHST 305

Query: 305 AGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWAT 364
           +GN+DG LNV+EEMKAIG++PNLV+YN++LDAMGRA RPW +KTI++EM+     PS AT
Sbjct: 306 SGNFDGALNVFEEMKAIGVRPNLVVYNTMLDAMGRALRPWVVKTIHREMVDQQVQPSRAT 365

Query: 365 YASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMK 424
           Y  LL AY RARYGEDA+ VY+ MK++ + ++V+LYN LL+MCAD+GYV+EA EIF+DMK
Sbjct: 366 YCCLLHAYTRARYGEDAMAVYRLMKDEAMGIDVMLYNMLLSMCADIGYVDEAEEIFRDMK 425

Query: 425 RS--GTCSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAK 484
            S      PDSW++SSM+T+YS +  V  AE +LN+MVEAGF PNIFVLTSLI+CYGK  
Sbjct: 426 ASMGAHSKPDSWSYSSMVTLYSSTANVLSAEGILNEMVEAGFKPNIFVLTSLIRCYGKVG 485

Query: 485 RVDDVVRTFNRLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVELL 544
           R DDVVR+F  L +LG+ PDDRFCGCLL+V   TP EEL K+I C+ R+N +LG VV+LL
Sbjct: 486 RTDDVVRSFGMLQDLGIIPDDRFCGCLLSVAANTPAEELGKVISCIERSNVQLGAVVKLL 545

Query: 545 LGEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYK 604
           +     E +FR  A EL       V+  YCNCL+DLCVNL+ ++KAC LLD    L IY 
Sbjct: 546 VDRSSSE-SFREAARELLRSSRGVVKMPYCNCLMDLCVNLNQMEKACALLDAAQQLGIYA 605

Query: 605 DLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLDSGEE-LPPLLGINTGHGKHKYS 664
           ++Q+R+ TQWSL+L+GLS+GAALT LHVW+NDL   L +G E LPPLLGI+TG GK+ YS
Sbjct: 606 NIQTRTQTQWSLHLRGLSVGAALTTLHVWMNDLYTSLQTGNEGLPPLLGIHTGQGKNTYS 665

Query: 665 DKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSSPELV 693
           D+GLA++FE+HLKEL+APFHEAP+K GWFLTT VAAK WLE +++ ELV
Sbjct: 666 DRGLAAMFEAHLKELDAPFHEAPDKAGWFLTTNVAAKQWLESKAASELV 689

[Close]
BLAST of PI0026323 vs. ExPASy Swiss-Prot
Match: Q9LS25 (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g46580 PE=2 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.3e-123
Identity = 259/709 (36.53%), Postives = 397/709 (55.99%), Query Frame = 0 

Query: 2   AFQLCHSPPTFFTDHHS--LSNSLIPQRKTTLSNSSPLFKLNPIPRHSKPFLQITNVSLQ 61
           A  +C +P    T  HS  L  SL  Q ++   N S      P     +P    T    +
Sbjct: 8   AIDVCFNPQNSDTKKHSLFLKPSLFRQSRSRKLNISCSSLKQPKTLEEEPITTKTPSLSE 67

Query: 62  EHAPQETQNTIPSDDEISKYPDAKSGSSSKSSVWVNPRSPRASKLRKQ-------SYEAR 121
           +  P           +I   P          SVWVNP  P+ S L  Q       SY  +
Sbjct: 68  QLKPLSATTLRQEQTQILSKP---------KSVWVNPTRPKRSVLSLQRQKRSAYSYNPQ 127

Query: 122 YTSLIRISESLDSCNPCE-VDVADVLKVIGNNILEQDAIVVLNNMSNSQTALLALRYFQH 181
              L   +  L+S    E  +   +L  I +     +A++VLN++   Q       + + 
Sbjct: 128 IKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFNWVKS 187

Query: 182 MLKSSKQTIFI-IDMEG---------AEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPN 241
                 +TIF  + M+           E++  EM+  GV+ DN+T+STII+CA+ C+L N
Sbjct: 188 KSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYN 247

Query: 242 KAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMI 301
           KA+EWFE+M      PD+VTYS ++D Y ++G V+   SLY+RA    W+ D   FS + 
Sbjct: 248 KAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLG 307

Query: 302 KIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFS 361
           K+ G AG+YDG   V +EMK++ +KPN+V+YN+LL+AMGRA +P   ++++ EM++ G +
Sbjct: 308 KMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLT 367

Query: 362 PSWATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEI 421
           P+  T  +L++ YG+AR+  DAL +++EMK K   ++ ILYNTLL MCAD+G   EA  +
Sbjct: 368 PNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERL 427

Query: 422 FQDMKRSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYG 481
           F DMK S  C PD++++++M+ IY   GK  +A E+  +M++AG   N+   T L+QC G
Sbjct: 428 FNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLG 487

Query: 482 KAKRVDDVVRTFNRLIELGLTPDDRFCGCLLNVITQ-TPKEELSKLIDCVVRANPKLGFV 541
           KAKR+DDVV  F+  I+ G+ PDDR CGCLL+V+      E+  K++ C+ RAN KL   
Sbjct: 488 KAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTF 547

Query: 542 VELLLGEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTL 601
           V L++ E+ +    + E   + +    + R+ +CNCLID+C   +  ++A ELL LG   
Sbjct: 548 VNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLF 607

Query: 602 QIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLDSGEELPPLLGINTGHGKH 661
            +Y  L +++  +WSL ++ LS+GAA TAL  W+  L  ++   EELP L    TG G H
Sbjct: 608 GLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTGTGTH 667

Query: 662 KYSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSSP 690
           ++S +GLA+ F  HL++L+APF ++ ++ G F+ TK    SWLE +  P
Sbjct: 668 RFS-QGLANSFALHLQQLSAPFRQS-DRPGIFVATKEDLVSWLESKFPP 705

[Close]
BLAST of PI0026323 vs. ExPASy Swiss-Prot
Match: Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 2.7e-49
Identity = 140/536 (26.12%), Postives = 264/536 (49.25%), Query Frame = 0 

Query: 186 EGAEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSTM 245
           E A  LF+EM NR ++ D  +++T++         + A E   +MP     P+ V+YST+
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415

Query: 246 IDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGI 305
           ID + +AG  D A +L+   R     +D  +++T++ I+   G  +  L++  EM ++GI
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475

Query: 306 KPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALL 365
           K ++V YN+LL   G+  +  ++K ++ EM +    P+  TY++L+  Y +    ++A+ 
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535

Query: 366 VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKRSGTCSPDSWTFSSMITIY 425
           +++E K  GL+ +V+LY+ L+      G V  AV +  +M + G  SP+  T++S+I  +
Sbjct: 536 IFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSIIDAF 595

Query: 426 SCSGKVSEAEEMLNDMVEAGFDPNIFVLTS-----LIQCYGK----------------AK 485
             S  +  + +  N          +  LT      +IQ +G+                 +
Sbjct: 596 GRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQ 655

Query: 486 RVDDVVRTFNRLIELGLTPDDRFCGCLLNVITQTPK-EELSKLIDCV-VRANPKLGFVVE 545
            +  ++  F ++ +L + P+      +LN  ++    E+ S L++ + +  N   G V  
Sbjct: 656 ELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHG 715

Query: 546 LLLGEQDKEGNFRTEASELFSVVS---ADVRKAYCNCLIDLCVNLDLLDKACELLDL-GL 605
           LL+G+++   N   +A  LF  V+        A+ N L D+  +     +  EL+ L G 
Sbjct: 716 LLMGQRE---NVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFG-QKRGAELVALEGR 775

Query: 606 TLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLDSGEELPPLLGINTGHG 665
           + Q+++++ S S     L L  +S GAA   +H W+ ++  ++  G ELP +L I TG G
Sbjct: 776 SRQVWENVWSDS----CLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWG 835

Query: 666 KHK--YSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSSPELV 693
           KH     D  L    E  L+ ++APFH +   +G F ++     +WL   ++ +L+
Sbjct: 836 KHSKVVGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLL 882

[Close]
BLAST of PI0026323 vs. ExPASy TrEMBL
Match: A0A5A7TLM5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00400 PE=3 SV=1)

HSP 1 Score: 1345.1 bits (3480), Expect = 0.0e+00
Identity = 671/704 (95.31%), Postives = 683/704 (97.02%), Query Frame = 0 

Query: 1   MAFQLCHSPPTFFTDHHSLSNSLIPQRKTTLSNSSPLFKLNPIPRHSKPFLQITNVSLQE 60
           MAFQLCHSPPTFFT HHSLSNSL PQRKTTLSNSSPLFKLNPIPRHS PFLQITN+SLQE
Sbjct: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60

Query: 61  HAPQETQNTIPSDDEISKYPDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLIRIS 120
           H+PQET NTIPSDDEISKY DAKSGSSSKSSVWVNPRSPRASKLRKQSYEARY SL+RIS
Sbjct: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120

Query: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAIVVLNNMSNSQTALLALRYFQHMLKSSKQTI 180
           ESLDSCNPCEVDVADVLKVIGNNILEQDA+VVLNNMSNSQTALLALRYFQ MLKSSKQTI
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 F----------IIDMEGAEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
           F            DMEGAE+LFEEMLNRGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKRSGT 420
           LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMK SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420

Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
           CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480

Query: 481 RTFNRLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVELLLGEQDK 540
           RTFN+LIELGLTPDDRFCGCLLNVITQTPKEE+SKLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLDSGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSLYLKGLSLGAALTALHVWINDLTKVL+SGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSSPELVAA 695
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLE RSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]
BLAST of PI0026323 vs. ExPASy TrEMBL
Match: A0A1S3CL39 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502208 PE=3 SV=1)

HSP 1 Score: 1345.1 bits (3480), Expect = 0.0e+00
Identity = 671/704 (95.31%), Postives = 683/704 (97.02%), Query Frame = 0 

Query: 1   MAFQLCHSPPTFFTDHHSLSNSLIPQRKTTLSNSSPLFKLNPIPRHSKPFLQITNVSLQE 60
           MAFQLCHSPPTFFT HHSLSNSL PQRKTTLSNSSPLFKLNPIPRHS PFLQITN+SLQE
Sbjct: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60

Query: 61  HAPQETQNTIPSDDEISKYPDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLIRIS 120
           H+PQET NTIPSDDEISKY DAKSGSSSKSSVWVNPRSPRASKLRKQSYEARY SL+RIS
Sbjct: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120

Query: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAIVVLNNMSNSQTALLALRYFQHMLKSSKQTI 180
           ESLDSCNPCEVDVADVLKVIGNNILEQDA+VVLNNMSNSQTALLALRYFQ MLKSSKQTI
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 F----------IIDMEGAEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
           F            DMEGAE+LFEEMLNRGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKRSGT 420
           LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMK SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420

Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
           CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480

Query: 481 RTFNRLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVELLLGEQDK 540
           RTFN+LIELGLTPDDRFCGCLLNVITQTPKEE+SKLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLDSGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSLYLKGLSLGAALTALHVWINDLTKVL+SGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSSPELVAA 695
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLE RSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]
BLAST of PI0026323 vs. ExPASy TrEMBL
Match: A0A0A0LVP1 (Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G173140 PE=3 SV=1)

HSP 1 Score: 1330.9 bits (3443), Expect = 0.0e+00
Identity = 665/704 (94.46%), Postives = 678/704 (96.31%), Query Frame = 0 

Query: 1   MAFQLCHSPPTFFTDHHSLSNSLIPQRKTTLSNSSPLFKLNPIPRHSKPFLQITNVSLQE 60
           MAFQLC+SPPTFFT+HH LSNSL PQRKTTLSNSSPLFKL+PIPRHSKPFLQITNVSLQE
Sbjct: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60

Query: 61  HAPQETQNTIPSDDEISKYPDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLIRIS 120
           HAPQ+TQNTIPS DEISKYPD+KSGSSS SSVWVNPRSPRASKLRKQSYEARY SLIR+S
Sbjct: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120

Query: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAIVVLNNMSNSQTALLALRYFQHMLKSSKQTI 180
           ESLDS NPCEVDVADVLKVIGNNILE+DAI+VLNNMSNSQTALLALRYFQ MLKSSKQTI
Sbjct: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 F----------IIDMEGAEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
           F            DMEGAEKLFEEM+NRGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKRSGT 420
           LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMK SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420

Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
           CSPDSWTFSSMITIYSC GKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480

Query: 481 RTFNRLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVELLLGEQDK 540
           RTFN+LIELGLTPDDRFCGCLLNVITQTPK EL KLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLDSGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSLYLKGLSLGAALTALHVWI DLTKVL+SGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSSPELVAA 695
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLE RSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]
BLAST of PI0026323 vs. ExPASy TrEMBL
Match: A0A6J1CNE5 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012613 PE=3 SV=1)

HSP 1 Score: 1240.3 bits (3208), Expect = 0.0e+00
Identity = 621/704 (88.21%), Postives = 646/704 (91.76%), Query Frame = 0 

Query: 1   MAFQLCHSPPTFFTDHHSLSNSLIPQRKTTLSNSSPLFKLNPIPRHSKPFLQITNVSLQE 60
           MAFQLCHSP TFF+DHH LSNSL  Q + TL  SS  FKLNP P HSK  L+ITNVSLQE
Sbjct: 1   MAFQLCHSPSTFFSDHHPLSNSLNSQHRITLRKSSHRFKLNPTPHHSKTCLRITNVSLQE 60

Query: 61  HAPQETQNTIPSDDEISKYPDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLIRIS 120
           +A QE QN IP+ DE SKYPD KS SSSKSSVWVNPRSPRASKLR QSYEARY SL RIS
Sbjct: 61  YAAQEAQNPIPTQDESSKYPDGKSNSSSKSSVWVNPRSPRASKLRNQSYEARYASLTRIS 120

Query: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAIVVLNNMSNSQTALLALRYFQHMLKSSKQTI 180
           ESLDSCNPCE DVADVLK +G+NILEQDA+ VLNNMSNS TALLAL+ FQ +LKSSK+ I
Sbjct: 121 ESLDSCNPCEEDVADVLKGMGSNILEQDAVAVLNNMSNSSTALLALQMFQKVLKSSKKAI 180

Query: 181 FI----------IDMEGAEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
                        DMEGAEKLF+EML RGVKPDNVTFST+ISCARLCSLPNKAVEWFEKM
Sbjct: 181 LYNVTLKVLRKSRDMEGAEKLFDEMLKRGVKPDNVTFSTVISCARLCSLPNKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFST+IKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTLIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKRSGT 420
           LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIF+DMK SG 
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFEDMKSSGA 420

Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
           CSPDSWTFSSMITIYSCSGKVSEAEEMLN+M+EAGFDPNIFVLTSLIQCYGK KRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKGKRVDDVV 480

Query: 481 RTFNRLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVELLLGEQDK 540
           RTF+RL+ELGLTPDDRFCGCLLNVITQTPKEELSKLIDCV RAN KLG+VV+LLLGEQDK
Sbjct: 481 RTFDRLVELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANSKLGYVVKLLLGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EG+ RTEASEL SVVSADVRKAYCNCLIDLCVNLDLL+KACELLDLGLTLQIY  LQS S
Sbjct: 541 EGDLRTEASELLSVVSADVRKAYCNCLIDLCVNLDLLEKACELLDLGLTLQIYTGLQSTS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLDSGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSL+LKGLSLGAALTALHVWINDLTKVL+SGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLHLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSSPELVAA 695
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLE R SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 704

[Close]
BLAST of PI0026323 vs. ExPASy TrEMBL
Match: A0A6J1EHV4 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434309 PE=3 SV=1)

HSP 1 Score: 1215.3 bits (3143), Expect = 0.0e+00
Identity = 613/705 (86.95%), Postives = 641/705 (90.92%), Query Frame = 0 

Query: 1   MAFQLCHSPPTFFTDHHSLSNSLIPQRKTTLSNS-SPLFKLNPIPRHSKPFLQITNVSLQ 60
           MAFQL H P TFFTDH    NSL    KTTL  S S +FKLNPIP HSKPFLQITNVS Q
Sbjct: 1   MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQ 60

Query: 61  EHAPQETQNTIPSDDEISKYPDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLIRI 120
           E+APQET+N  PSDDEISK+PD KSGSSSK+SVWVNP SPRASKLRKQSYEARY SL +I
Sbjct: 61  EYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120

Query: 121 SESLDSCNPCEVDVADVLKVIGNNILEQDAIVVLNNMSNSQTALLALRYFQHMLKSSKQT 180
           SESLDSCNPCEVDVADVLK I + ILEQDAI VLNNMSNSQTALL  RYFQ +LKSSKQ 
Sbjct: 121 SESLDSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQA 180

Query: 181 IF----------IIDMEGAEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
           +F            D EGAEKLF+EML RGVKPDNVTFSTIISCARLCSLPNKAVEWFEK
Sbjct: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240

Query: 241 MPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 300
           MPSFDCNPD++TYS MIDAYGRAGNVDMAFSLYDRARTENWRID +TFSTMIKIHGVAGN
Sbjct: 241 MPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGN 300

Query: 301 YDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYAS 360
           YDGCLNVYEEMKA+GIKPNL IYNSLL AMGRAKRPWQIKTIYKEM KNGFSPSWATYAS
Sbjct: 301 YDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYAS 360

Query: 361 LLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKRSG 420
           LLRAY RARY ED +LVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA+E+F+DMK SG
Sbjct: 361 LLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSG 420

Query: 421 TCSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
           TCSPDSWTFSSMITIYSCSG VSEAEEMLN+M+EAGFDPNIFVLTSLIQCYGKAKRVDDV
Sbjct: 421 TCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDV 480

Query: 481 VRTFNRLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVELLLGEQD 540
           VRTF+RL+ELGLTPDDRFCGCLLNVITQTPK ELSKLIDCV RANPKLGFVV+LLLGE+D
Sbjct: 481 VRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKD 540

Query: 541 KEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSR 600
            EG+FRTEASELFSVVS DVRKAYCNCLIDLCVNLDLLDKACELLDLGL++QIY DLQSR
Sbjct: 541 MEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSR 600

Query: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKVLDSGEELPPLLGINTGHGKHKYSDKGLAS 660
           SPTQWSLYLKGLSLGAALTALHVWINDLTK L SGEELPPLLGINTGHGKHKYSDKGL+S
Sbjct: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSS 660

Query: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSSPELVAA 695
           VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLE R SPELVAA
Sbjct: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701

[Close]
BLAST of PI0026323 vs. NCBI nr
Match: XP_008464281.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis melo] >KAA0042345.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK15469.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1345.1 bits (3480), Expect = 0.0e+00
Identity = 671/704 (95.31%), Postives = 683/704 (97.02%), Query Frame = 0 

Query: 1   MAFQLCHSPPTFFTDHHSLSNSLIPQRKTTLSNSSPLFKLNPIPRHSKPFLQITNVSLQE 60
           MAFQLCHSPPTFFT HHSLSNSL PQRKTTLSNSSPLFKLNPIPRHS PFLQITN+SLQE
Sbjct: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60

Query: 61  HAPQETQNTIPSDDEISKYPDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLIRIS 120
           H+PQET NTIPSDDEISKY DAKSGSSSKSSVWVNPRSPRASKLRKQSYEARY SL+RIS
Sbjct: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120

Query: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAIVVLNNMSNSQTALLALRYFQHMLKSSKQTI 180
           ESLDSCNPCEVDVADVLKVIGNNILEQDA+VVLNNMSNSQTALLALRYFQ MLKSSKQTI
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 F----------IIDMEGAEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
           F            DMEGAE+LFEEMLNRGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKRSGT 420
           LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMK SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420

Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
           CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480

Query: 481 RTFNRLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVELLLGEQDK 540
           RTFN+LIELGLTPDDRFCGCLLNVITQTPKEE+SKLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLDSGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSLYLKGLSLGAALTALHVWINDLTKVL+SGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSSPELVAA 695
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLE RSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]
BLAST of PI0026323 vs. NCBI nr
Match: XP_004139516.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis sativus] >KGN64994.1 hypothetical protein Csa_022775 [Cucumis sativus])

HSP 1 Score: 1330.9 bits (3443), Expect = 0.0e+00
Identity = 665/704 (94.46%), Postives = 678/704 (96.31%), Query Frame = 0 

Query: 1   MAFQLCHSPPTFFTDHHSLSNSLIPQRKTTLSNSSPLFKLNPIPRHSKPFLQITNVSLQE 60
           MAFQLC+SPPTFFT+HH LSNSL PQRKTTLSNSSPLFKL+PIPRHSKPFLQITNVSLQE
Sbjct: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60

Query: 61  HAPQETQNTIPSDDEISKYPDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLIRIS 120
           HAPQ+TQNTIPS DEISKYPD+KSGSSS SSVWVNPRSPRASKLRKQSYEARY SLIR+S
Sbjct: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120

Query: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAIVVLNNMSNSQTALLALRYFQHMLKSSKQTI 180
           ESLDS NPCEVDVADVLKVIGNNILE+DAI+VLNNMSNSQTALLALRYFQ MLKSSKQTI
Sbjct: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 F----------IIDMEGAEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
           F            DMEGAEKLFEEM+NRGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKRSGT 420
           LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMK SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420

Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
           CSPDSWTFSSMITIYSC GKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480

Query: 481 RTFNRLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVELLLGEQDK 540
           RTFN+LIELGLTPDDRFCGCLLNVITQTPK EL KLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLDSGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSLYLKGLSLGAALTALHVWI DLTKVL+SGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSSPELVAA 695
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLE RSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]
BLAST of PI0026323 vs. NCBI nr
Match: XP_038877791.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Benincasa hispida])

HSP 1 Score: 1309.7 bits (3388), Expect = 0.0e+00
Identity = 655/704 (93.04%), Postives = 670/704 (95.17%), Query Frame = 0 

Query: 1   MAFQLCHSPPTFFTDHHSLSNSLIPQRKTTLSNSSPLFKLNPIPRHSKPFLQITNVSLQE 60
           MAFQLCHSP TFFTDHHSLSNSL  QRKTTL NSS LFKLNPIPRHSKPFLQITNVSLQE
Sbjct: 1   MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQE 60

Query: 61  HAPQETQNTIPSDDEISKYPDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLIRIS 120
           +APQET N  PS+DEISKYPD KS SSSKSSVWVNPRSPRASKLRKQSYEARY SL RIS
Sbjct: 61  YAPQETHNPSPSNDEISKYPDGKSSSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRIS 120

Query: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAIVVLNNMSNSQTALLALRYFQHMLKSSKQTI 180
           ESLDSCNPC+ DVADVLK IG+NIL+QDA+VVLNNMSNSQTALLALRYFQ +LKSSKQ I
Sbjct: 121 ESLDSCNPCQEDVADVLKEIGSNILQQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAI 180

Query: 181 F----------IIDMEGAEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
           F            DMEGAEKLFEEML RGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKRSGT 420
           LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYV EAVE+FQDMK SGT
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVYEAVEVFQDMKSSGT 420

Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
           CSPDSWTFSSMITIYSCSGKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480

Query: 481 RTFNRLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVELLLGEQDK 540
           RTF+RLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVV+LL+GEQDK
Sbjct: 481 RTFSRLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVKLLMGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQ+YKDLQSRS
Sbjct: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQLYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLDSGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSLYLKGLSLGA LTALHVWINDLTKVL+SGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAGLTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSSPELVAA 695
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLE RSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]
BLAST of PI0026323 vs. NCBI nr
Match: XP_022142513.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Momordica charantia])

HSP 1 Score: 1240.3 bits (3208), Expect = 0.0e+00
Identity = 621/704 (88.21%), Postives = 646/704 (91.76%), Query Frame = 0 

Query: 1   MAFQLCHSPPTFFTDHHSLSNSLIPQRKTTLSNSSPLFKLNPIPRHSKPFLQITNVSLQE 60
           MAFQLCHSP TFF+DHH LSNSL  Q + TL  SS  FKLNP P HSK  L+ITNVSLQE
Sbjct: 1   MAFQLCHSPSTFFSDHHPLSNSLNSQHRITLRKSSHRFKLNPTPHHSKTCLRITNVSLQE 60

Query: 61  HAPQETQNTIPSDDEISKYPDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLIRIS 120
           +A QE QN IP+ DE SKYPD KS SSSKSSVWVNPRSPRASKLR QSYEARY SL RIS
Sbjct: 61  YAAQEAQNPIPTQDESSKYPDGKSNSSSKSSVWVNPRSPRASKLRNQSYEARYASLTRIS 120

Query: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAIVVLNNMSNSQTALLALRYFQHMLKSSKQTI 180
           ESLDSCNPCE DVADVLK +G+NILEQDA+ VLNNMSNS TALLAL+ FQ +LKSSK+ I
Sbjct: 121 ESLDSCNPCEEDVADVLKGMGSNILEQDAVAVLNNMSNSSTALLALQMFQKVLKSSKKAI 180

Query: 181 FI----------IDMEGAEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
                        DMEGAEKLF+EML RGVKPDNVTFST+ISCARLCSLPNKAVEWFEKM
Sbjct: 181 LYNVTLKVLRKSRDMEGAEKLFDEMLKRGVKPDNVTFSTVISCARLCSLPNKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFST+IKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTLIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKRSGT 420
           LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIF+DMK SG 
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFEDMKSSGA 420

Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
           CSPDSWTFSSMITIYSCSGKVSEAEEMLN+M+EAGFDPNIFVLTSLIQCYGK KRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKGKRVDDVV 480

Query: 481 RTFNRLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVELLLGEQDK 540
           RTF+RL+ELGLTPDDRFCGCLLNVITQTPKEELSKLIDCV RAN KLG+VV+LLLGEQDK
Sbjct: 481 RTFDRLVELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANSKLGYVVKLLLGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EG+ RTEASEL SVVSADVRKAYCNCLIDLCVNLDLL+KACELLDLGLTLQIY  LQS S
Sbjct: 541 EGDLRTEASELLSVVSADVRKAYCNCLIDLCVNLDLLEKACELLDLGLTLQIYTGLQSTS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLDSGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSL+LKGLSLGAALTALHVWINDLTKVL+SGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLHLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSSPELVAA 695
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLE R SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 704

[Close]
BLAST of PI0026323 vs. NCBI nr
Match: KAG6583722.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1216.1 bits (3145), Expect = 0.0e+00
Identity = 613/705 (86.95%), Postives = 642/705 (91.06%), Query Frame = 0 

Query: 1   MAFQLCHSPPTFFTDHHSLSNSLIPQRKTTL-SNSSPLFKLNPIPRHSKPFLQITNVSLQ 60
           MAFQL H P TFFTDH    NSL    KTTL  +SS +FKLNPIP HSKPFLQITNVS Q
Sbjct: 1   MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSSSRVFKLNPIPYHSKPFLQITNVSQQ 60

Query: 61  EHAPQETQNTIPSDDEISKYPDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLIRI 120
           E+APQET+N  PSDDEISK+PD KSGSSSK+SVWVNP SPRASKLRKQSYEARY SL +I
Sbjct: 61  EYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120

Query: 121 SESLDSCNPCEVDVADVLKVIGNNILEQDAIVVLNNMSNSQTALLALRYFQHMLKSSKQT 180
           SESLDSCNPCE DVADVLK I + ILEQDAI VLNNMSNSQTALL LRYFQ +LKSSKQ 
Sbjct: 121 SESLDSCNPCEDDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVLRYFQDVLKSSKQA 180

Query: 181 IF----------IIDMEGAEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
           +F            D EGAEKLF+EML RGVKPDNVTFSTIISCARLCSLPNKAVEWFEK
Sbjct: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240

Query: 241 MPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 300
           MPSFDCNPD++TYS MIDAYGRAGNVDMAFSLYDRARTENWRID +TFSTMIKIHGVAGN
Sbjct: 241 MPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGN 300

Query: 301 YDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYAS 360
           YDGCLNVYEEMKA+GIKPNL IYNSLL AMGRAKRPWQIKTIYKEM KNGFSPSWATYAS
Sbjct: 301 YDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYAS 360

Query: 361 LLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKRSG 420
           LLRAY RARY ED +LVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA+E+F+DMK SG
Sbjct: 361 LLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSG 420

Query: 421 TCSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
           TCSPDSWTFSSMITIYSCSG VSEAEEMLN+M+EAGFDPNIFVLTSLIQCYGKAKRVDDV
Sbjct: 421 TCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDV 480

Query: 481 VRTFNRLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVELLLGEQD 540
           VRTF+RL+ELGLTPDDRFCGCLLNVITQTPK ELSKLIDCV RANPKLGFVV+LLLGE+D
Sbjct: 481 VRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKD 540

Query: 541 KEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSR 600
            EG+FRTEASELFSVVS DVRKAYCNCLIDLCVNLDLLDKACELLDLGL++QIY DLQSR
Sbjct: 541 MEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSR 600

Query: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKVLDSGEELPPLLGINTGHGKHKYSDKGLAS 660
           SPTQWSLYLKGLSLGAALTALHVWINDLTK L SGEELPPLLGINTGHGKHKYSDKGL+S
Sbjct: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSS 660

Query: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSSPELVAA 695
           VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLE R SPELVAA
Sbjct: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701

[Close]
BLAST of PI0026323 vs. TAIR 10
Match: AT4G16390.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 903.7 bits (2334), Expect = 9.4e-263
Identity = 451/702 (64.25%), Postives = 549/702 (78.21%), Query Frame = 0 

Query: 5   LCHSPPTFFTDHHSLSNSLIPQRKTTLSNSSPLFKLNPIPRHSKPFLQITNVSLQEHAPQ 64
           LC SP +   D   L N L    K+T  +    +  N    HS+  LQ T+VS+QE  PQ
Sbjct: 6   LCSSPSSLLHDPLPLCNLLSVYPKSTPRSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQ 65

Query: 65  ETQNTIPSDDEISKYPDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLIRISESLD 124
             ++ +   D     P A     SKS VWVNP+SPRAS+LR++SY++RY+SLI+++ESLD
Sbjct: 66  SEKSKLVDVDLPIPEPTA-----SKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLD 125

Query: 125 SCNPCEVDVADVLKVIGNNILEQDAIVVLNNMSNSQTALLALRYFQHMLKSSKQTIFI-- 184
           +C P E DV DV+   G  + EQDA+V LNNM+N +TA L L      +K S++ I    
Sbjct: 126 ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 185

Query: 185 --------IDMEGAEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFD 244
                    D+E +EKLF+EML RG+KPDN TF+TIISCAR   +P +AVEWFEKM SF 
Sbjct: 186 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFG 245

Query: 245 CNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCL 304
           C PD+VT + MIDAYGRAGNVDMA SLYDRARTE WRID  TFST+I+I+GV+GNYDGCL
Sbjct: 246 CEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCL 305

Query: 305 NVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAY 364
           N+YEEMKA+G+KPNLVIYN L+D+MGRAKRPWQ K IYK++I NGF+P+W+TYA+L+RAY
Sbjct: 306 NIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 365

Query: 365 GRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKRSGTCSPD 424
           GRARYG+DAL +Y+EMKEKGL L VILYNTLL+MCAD  YV+EA EIFQDMK   TC PD
Sbjct: 366 GRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPD 425

Query: 425 SWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFN 484
           SWTFSS+IT+Y+CSG+VSEAE  L  M EAGF+P +FVLTS+IQCYGKAK+VDDVVRTF+
Sbjct: 426 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 485

Query: 485 RLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVELLLGEQD-KEGN 544
           +++ELG+TPDDRFCGCLLNV+TQTP EE+ KLI CV +A PKLG VV++L+ EQ+ +EG 
Sbjct: 486 QVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGV 545

Query: 545 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRSPTQ 604
           F+ EASEL   + +DV+KAY NCLIDLCVNL+ L++ACE+L LGL   IY  LQS+S TQ
Sbjct: 546 FKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQ 605

Query: 605 WSLYLKGLSLGAALTALHVWINDLTK-VLDSGEELPPLLGINTGHGKHKYSDKGLASVFE 664
           WSL+LK LSLGAALTALHVW+NDL++  L+SGEE PPLLGINTGHGKHKYSDKGLA+VFE
Sbjct: 606 WSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFE 665

Query: 665 SHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSSPELVAA 695
           SHLKELNAPFHEAP+KVGWFLTT VAAK+WLE R S   V+A
Sbjct: 666 SHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702

[Close]
BLAST of PI0026323 vs. TAIR 10
Match: AT5G46580.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 445.3 bits (1144), Expect = 9.1e-125
Identity = 259/709 (36.53%), Postives = 397/709 (55.99%), Query Frame = 0 

Query: 2   AFQLCHSPPTFFTDHHS--LSNSLIPQRKTTLSNSSPLFKLNPIPRHSKPFLQITNVSLQ 61
           A  +C +P    T  HS  L  SL  Q ++   N S      P     +P    T    +
Sbjct: 8   AIDVCFNPQNSDTKKHSLFLKPSLFRQSRSRKLNISCSSLKQPKTLEEEPITTKTPSLSE 67

Query: 62  EHAPQETQNTIPSDDEISKYPDAKSGSSSKSSVWVNPRSPRASKLRKQ-------SYEAR 121
           +  P           +I   P          SVWVNP  P+ S L  Q       SY  +
Sbjct: 68  QLKPLSATTLRQEQTQILSKP---------KSVWVNPTRPKRSVLSLQRQKRSAYSYNPQ 127

Query: 122 YTSLIRISESLDSCNPCE-VDVADVLKVIGNNILEQDAIVVLNNMSNSQTALLALRYFQH 181
              L   +  L+S    E  +   +L  I +     +A++VLN++   Q       + + 
Sbjct: 128 IKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFNWVKS 187

Query: 182 MLKSSKQTIFI-IDMEG---------AEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPN 241
                 +TIF  + M+           E++  EM+  GV+ DN+T+STII+CA+ C+L N
Sbjct: 188 KSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYN 247

Query: 242 KAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMI 301
           KA+EWFE+M      PD+VTYS ++D Y ++G V+   SLY+RA    W+ D   FS + 
Sbjct: 248 KAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLG 307

Query: 302 KIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFS 361
           K+ G AG+YDG   V +EMK++ +KPN+V+YN+LL+AMGRA +P   ++++ EM++ G +
Sbjct: 308 KMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLT 367

Query: 362 PSWATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEI 421
           P+  T  +L++ YG+AR+  DAL +++EMK K   ++ ILYNTLL MCAD+G   EA  +
Sbjct: 368 PNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERL 427

Query: 422 FQDMKRSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYG 481
           F DMK S  C PD++++++M+ IY   GK  +A E+  +M++AG   N+   T L+QC G
Sbjct: 428 FNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLG 487

Query: 482 KAKRVDDVVRTFNRLIELGLTPDDRFCGCLLNVITQ-TPKEELSKLIDCVVRANPKLGFV 541
           KAKR+DDVV  F+  I+ G+ PDDR CGCLL+V+      E+  K++ C+ RAN KL   
Sbjct: 488 KAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTF 547

Query: 542 VELLLGEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTL 601
           V L++ E+ +    + E   + +    + R+ +CNCLID+C   +  ++A ELL LG   
Sbjct: 548 VNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLF 607

Query: 602 QIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLDSGEELPPLLGINTGHGKH 661
            +Y  L +++  +WSL ++ LS+GAA TAL  W+  L  ++   EELP L    TG G H
Sbjct: 608 GLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTGTGTH 667

Query: 662 KYSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSSP 690
           ++S +GLA+ F  HL++L+APF ++ ++ G F+ TK    SWLE +  P
Sbjct: 668 RFS-QGLANSFALHLQQLSAPFRQS-DRPGIFVATKEDLVSWLESKFPP 705

[Close]
BLAST of PI0026323 vs. TAIR 10
Match: AT2G31400.1 (genomes uncoupled 1 )

HSP 1 Score: 198.4 bits (503), Expect = 1.9e-50
Identity = 140/536 (26.12%), Postives = 264/536 (49.25%), Query Frame = 0 

Query: 186 EGAEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSTM 245
           E A  LF+EM NR ++ D  +++T++         + A E   +MP     P+ V+YST+
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415

Query: 246 IDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGI 305
           ID + +AG  D A +L+   R     +D  +++T++ I+   G  +  L++  EM ++GI
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475

Query: 306 KPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALL 365
           K ++V YN+LL   G+  +  ++K ++ EM +    P+  TY++L+  Y +    ++A+ 
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535

Query: 366 VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKRSGTCSPDSWTFSSMITIY 425
           +++E K  GL+ +V+LY+ L+      G V  AV +  +M + G  SP+  T++S+I  +
Sbjct: 536 IFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSIIDAF 595

Query: 426 SCSGKVSEAEEMLNDMVEAGFDPNIFVLTS-----LIQCYGK----------------AK 485
             S  +  + +  N          +  LT      +IQ +G+                 +
Sbjct: 596 GRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQ 655

Query: 486 RVDDVVRTFNRLIELGLTPDDRFCGCLLNVITQTPK-EELSKLIDCV-VRANPKLGFVVE 545
            +  ++  F ++ +L + P+      +LN  ++    E+ S L++ + +  N   G V  
Sbjct: 656 ELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHG 715

Query: 546 LLLGEQDKEGNFRTEASELFSVVS---ADVRKAYCNCLIDLCVNLDLLDKACELLDL-GL 605
           LL+G+++   N   +A  LF  V+        A+ N L D+  +     +  EL+ L G 
Sbjct: 716 LLMGQRE---NVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFG-QKRGAELVALEGR 775

Query: 606 TLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLDSGEELPPLLGINTGHG 665
           + Q+++++ S S     L L  +S GAA   +H W+ ++  ++  G ELP +L I TG G
Sbjct: 776 SRQVWENVWSDS----CLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWG 835

Query: 666 KHK--YSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLEYRSSPELV 693
           KH     D  L    E  L+ ++APFH +   +G F ++     +WL   ++ +L+
Sbjct: 836 KHSKVVGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLL 882

[Close]
BLAST of PI0026323 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 164.5 bits (415), Expect = 3.1e-40
Identity = 98/336 (29.17%), Postives = 171/336 (50.89%), Query Frame = 0 

Query: 169 FQHMLKSSKQTIFI--IDMEG----AEKLFEEMLNRGVKPDNVTFSTIISCARLCSLPNK 228
           +Q ML +S   I I  +  EG    A  +F  +   G   D  +++++IS         +
Sbjct: 167 YQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYRE 226

Query: 229 AVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNV-DMAFSLYDRARTENWRIDPATFSTMI 288
           AV  F+KM    C P  +TY+ +++ +G+ G   +   SL ++ +++    D  T++T+I
Sbjct: 227 AVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI 286

Query: 289 KIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFS 348
                   +     V+EEMKA G   + V YN+LLD  G++ RP +   +  EM+ NGFS
Sbjct: 287 TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFS 346

Query: 349 PSWATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEI 408
           PS  TY SL+ AY R    ++A+ +  +M EKG + +V  Y TLL+     G V  A+ I
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406

Query: 409 FQDMKRSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYG 468
           F++M+ +G C P+  TF++ I +Y   GK +E  ++ +++   G  P+I    +L+  +G
Sbjct: 407 FEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 466

Query: 469 KAKRVDDVVRTFNRLIELGLTPDDRFCGCLLNVITQ 498
           +     +V   F  +   G  P+      L++  ++
Sbjct: 467 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501

[Close]
BLAST of PI0026323 vs. TAIR 10
Match: AT1G18900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 164.1 bits (414), Expect = 4.1e-40
Identity = 109/493 (22.11%), Postives = 230/493 (46.65%), Query Frame = 0 

Query: 199 GVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMA 258
           G K D  T++T++             +  ++M    C P+ VTY+ +I +YGRA  ++ A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418

Query: 259 FSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDA 318
            +++++ +    + D  T+ T+I IH  AG  D  +++Y+ M+A G+ P+   Y+ +++ 
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478

Query: 319 MGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALLVYKEMKEKGLQLN 378
           +G+A        ++ EM+  G +P+  TY  ++  + +AR  ++AL +Y++M+  G + +
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538

Query: 379 VILYNTLLAMCADVGYVNEAVEIFQDMKRSGTCSPDSWTFSSMITIYSCSGKVSEAEEML 438
            + Y+ ++ +    GY+ EA  +F +M++     PD   +  ++ ++  +G V +A +  
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNVEKAWQWY 598

Query: 439 NDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNRLIELGLTPDDRFCGCLLNVITQ- 498
             M+ AG  PN+    SL+  + +  ++ +       ++ LGL P  +    LL+  T  
Sbjct: 599 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 658

Query: 499 TPKEELSKLIDCVV-RANPKLGFVVELLLGEQDKEGNFRTEASELFSVVSADVR---KAY 558
             K ++      +    +P   F++++     D E N R  A+    ++ ++ R   +  
Sbjct: 659 RSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGE-NVRNHANNFLDLMHSEDRESKRGL 718

Query: 559 CNCLIDLCVNLDLLDKACELLDLGLTLQIYKD-LQSRSPTQWSLYLKGLSLGAALTALHV 618
            + ++D        ++A  + ++     ++ D L+ +S + W + L  +S G A+TAL  
Sbjct: 719 VDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSR 778

Query: 619 WINDLTKVLDSGEELPPLLGINTGHGKHK--YSDKGLASVFESHLKELNAPFHEAPEKVG 678
            +    K + +    P  + I TG G+         +    E  L    +PF       G
Sbjct: 779 TLAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSG 838

Query: 679 WFLTTKVAAKSWL 684
            F+ +      WL
Sbjct: 839 CFVGSGEPLNRWL 849

The following BLAST results are available for this feature:
BLAST of PI0026323 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8GWE01.3e-26164.25Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidop... [more]
Q10PZ42.1e-19853.83Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza... [more]
B4F8Z11.0e-19751.90Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4... [more]
Q9LS251.3e-12336.53Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidop... [more]
Q9SIC92.7e-4926.12Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... [more]
BLAST of PI0026323 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TLM50.0e+0095.31Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CL390.0e+0095.31pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucumis ... [more]
A0A0A0LVP10.0e+0094.46Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G173140 PE=3 SV... [more]
A0A6J1CNE50.0e+0088.21pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Momordic... [more]
A0A6J1EHV40.0e+0086.95pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucurbit... [more]
BLAST of PI0026323 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008464281.10.0e+0095.31PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic ... [more]
XP_004139516.10.0e+0094.46pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis sa... [more]
XP_038877791.10.0e+0093.04pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Benincasa ... [more]
XP_022142513.10.0e+0088.21pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Momordica ... [more]
KAG6583722.10.0e+0086.95Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
BLAST of PI0026323 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G16390.19.4e-26364.25pentatricopeptide (PPR) repeat-containing protein [more]
AT5G46580.19.1e-12536.53pentatricopeptide (PPR) repeat-containing protein [more]
AT2G31400.11.9e-5026.12genomes uncoupled 1 [more]
AT5G02860.13.1e-4029.17Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G18900.14.1e-4022.11Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002625Smr domainSMARTSM00463SMR_2coord: 593..683
e-value: 2.5E-14
score: 63.6
IPR002625Smr domainPROSITEPS50828SMRcoord: 596..680
score: 17.024918
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 307..354
e-value: 5.9E-8
score: 32.8
coord: 184..213
e-value: 1.2E-7
score: 31.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 276..305
e-value: 1.4E-4
score: 21.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 276..308
e-value: 4.2E-5
score: 21.5
coord: 417..449
e-value: 6.9E-7
score: 27.1
coord: 381..414
e-value: 5.5E-6
score: 24.2
coord: 240..273
e-value: 6.8E-8
score: 30.2
coord: 346..378
e-value: 1.6E-7
score: 29.1
coord: 453..484
e-value: 8.3E-6
score: 23.7
coord: 310..344
e-value: 2.0E-5
score: 22.4
coord: 205..238
e-value: 0.0012
score: 16.8
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 234..264
e-value: 4.5E-9
score: 35.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 308..342
score: 10.972319
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 203..237
score: 8.6266
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 449..483
score: 10.413293
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 414..448
score: 11.695765
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 238..272
score: 11.016164
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 273..307
score: 10.961357
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 343..377
score: 10.588674
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 378..412
score: 10.862706
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 391..514
e-value: 3.8E-26
score: 93.5
coord: 290..390
e-value: 9.9E-27
score: 95.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 147..289
e-value: 4.3E-30
score: 107.2
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 362..501
e-value: 3.3E-12
score: 46.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..97
NoneNo IPR availablePANTHERPTHR47447OS03G0856100 PROTEINcoord: 45..693
NoneNo IPR availablePANTHERPTHR47447:SF8PENTATRICOPEPTIDE REPEAT PROTEIN-RELATEDcoord: 45..693
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 248..482

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0026323.1PI0026323.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0031425 chloroplast RNA processing
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding